Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841050 | KEH19097.1 | 95.308 | 341 | 2 | 1 | 1 | 327 | 1 | 341 | 0.0 | 664 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841050 | sp|Q7ZVZ7|AB17C_DANRE | 38.783 | 263 | 140 | 6 | 6 | 249 | 27 | 287 | 9.37e-57 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841050 | A0A072TNV6 | 95.308 | 341 | 2 | 1 | 1 | 327 | 1 | 341 | 0.0 | 664 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0841050 | -0.865438 | 5.904108e-65 | -8.615850e-47 |
| Msa0007810 | Msa0841050 | -0.812647 | 3.816517e-51 | -8.615850e-47 |
| Msa0011060 | Msa0841050 | -0.800238 | 1.583138e-48 | -8.615850e-47 |
| Msa0011100 | Msa0841050 | -0.804276 | 2.334709e-49 | -8.615850e-47 |
| Msa0011440 | Msa0841050 | -0.814026 | 1.899742e-51 | -8.615850e-47 |
| Msa0011450 | Msa0841050 | -0.810471 | 1.133676e-50 | -8.615850e-47 |
| Msa0013270 | Msa0841050 | 0.812560 | 3.986658e-51 | -8.615850e-47 |
| Msa0016380 | Msa0841050 | -0.811440 | 6.992241e-51 | -8.615850e-47 |
| Msa0017300 | Msa0841050 | -0.852286 | 5.099655e-61 | -8.615850e-47 |
| Msa0017710 | Msa0841050 | 0.800895 | 1.162859e-48 | -8.615850e-47 |
| Msa0025570 | Msa0841050 | 0.804855 | 1.767850e-49 | -8.615850e-47 |
| Msa0033220 | Msa0841050 | 0.839561 | 1.472156e-57 | -8.615850e-47 |
| Msa0034700 | Msa0841050 | -0.805319 | 1.413569e-49 | -8.615850e-47 |
| Msa0038150 | Msa0841050 | -0.808696 | 2.728131e-50 | -8.615850e-47 |
| Msa0038750 | Msa0841050 | -0.802254 | 6.120684e-49 | -8.615850e-47 |
| Msa0039750 | Msa0841050 | 0.819052 | 1.422050e-52 | -8.615850e-47 |
| Msa0040860 | Msa0841050 | -0.808368 | 3.205554e-50 | -8.615850e-47 |
| Msa0044530 | Msa0841050 | -0.857925 | 1.170476e-62 | -8.615850e-47 |
| Msa0056230 | Msa0841050 | -0.813929 | 1.995819e-51 | -8.615850e-47 |
| Msa0060410 | Msa0841050 | 0.818189 | 2.231748e-52 | -8.615850e-47 |
| Msa0065670 | Msa0841050 | -0.862928 | 3.578509e-64 | -8.615850e-47 |
| Msa0066890 | Msa0841050 | -0.812016 | 5.241187e-51 | -8.615850e-47 |
| Msa0077570 | Msa0841050 | -0.826296 | 2.932344e-54 | -8.615850e-47 |
| Msa0079880 | Msa0841050 | 0.846637 | 1.916858e-59 | -8.615850e-47 |
| Msa0080030 | Msa0841050 | 0.843237 | 1.585049e-58 | -8.615850e-47 |
| Msa0086620 | Msa0841050 | -0.822482 | 2.314247e-53 | -8.615850e-47 |
| Msa0089470 | Msa0841050 | -0.814304 | 1.649708e-51 | -8.615850e-47 |
| Msa0091220 | Msa0841050 | -0.845207 | 4.689173e-59 | -8.615850e-47 |
| Msa0091240 | Msa0841050 | -0.855639 | 5.512891e-62 | -8.615850e-47 |
| Msa0094170 | Msa0841050 | -0.818919 | 1.524193e-52 | -8.615850e-47 |
| Msa0094560 | Msa0841050 | 0.849807 | 2.551252e-60 | -8.615850e-47 |
| Msa0094570 | Msa0841050 | 0.834633 | 2.677416e-56 | -8.615850e-47 |
| Msa0095810 | Msa0841050 | -0.865836 | 4.423581e-65 | -8.615850e-47 |
| Msa0095890 | Msa0841050 | -0.806216 | 9.159328e-50 | -8.615850e-47 |
| Msa0102240 | Msa0841050 | 0.811436 | 7.008597e-51 | -8.615850e-47 |
| Msa0106540 | Msa0841050 | 0.814105 | 1.824780e-51 | -8.615850e-47 |
| Msa0111110 | Msa0841050 | -0.851545 | 8.274947e-61 | -8.615850e-47 |
| Msa0603180 | Msa0841050 | -0.812080 | 5.074599e-51 | -8.615850e-47 |
| Msa0604190 | Msa0841050 | 0.802278 | 6.052248e-49 | -8.615850e-47 |
| Msa0619300 | Msa0841050 | 0.800008 | 1.762653e-48 | -8.615850e-47 |
| Msa0644220 | Msa0841050 | -0.800676 | 1.289023e-48 | -8.615850e-47 |
| Msa0645390 | Msa0841050 | 0.819171 | 1.336077e-52 | -8.615850e-47 |
| Msa0651990 | Msa0841050 | -0.809383 | 1.944563e-50 | -8.615850e-47 |
| Msa0654570 | Msa0841050 | -0.802444 | 5.595247e-49 | -8.615850e-47 |
| Msa0657710 | Msa0841050 | 0.804654 | 1.946904e-49 | -8.615850e-47 |
| Msa0661480 | Msa0841050 | 0.834210 | 3.418553e-56 | -8.615850e-47 |
| Msa0676570 | Msa0841050 | -0.820816 | 5.616340e-53 | -8.615850e-47 |
| Msa0680370 | Msa0841050 | 0.801173 | 1.020238e-48 | -8.615850e-47 |
| Msa0684030 | Msa0841050 | -0.813637 | 2.313796e-51 | -8.615850e-47 |
| Msa0702800 | Msa0841050 | 0.808382 | 3.183397e-50 | -8.615850e-47 |
| Msa0704690 | Msa0841050 | 0.827592 | 1.436851e-54 | -8.615850e-47 |
| Msa0719270 | Msa0841050 | 0.809191 | 2.137463e-50 | -8.615850e-47 |
| Msa0719750 | Msa0841050 | 0.932022 | 1.586767e-94 | -8.615850e-47 |
| Msa0726170 | Msa0841050 | -0.804913 | 1.719261e-49 | -8.615850e-47 |
| Msa0733240 | Msa0841050 | -0.815322 | 9.810909e-52 | -8.615850e-47 |
| Msa0741040 | Msa0841050 | 0.829568 | 4.787292e-55 | -8.615850e-47 |
| Msa0742370 | Msa0841050 | -0.823586 | 1.279218e-53 | -8.615850e-47 |
| Msa0745140 | Msa0841050 | 0.817623 | 2.996455e-52 | -8.615850e-47 |
| Msa0746650 | Msa0841050 | 0.807833 | 4.167055e-50 | -8.615850e-47 |
| Msa0755880 | Msa0841050 | 0.808425 | 3.117116e-50 | -8.615850e-47 |
| Msa0769910 | Msa0841050 | -0.803233 | 3.843101e-49 | -8.615850e-47 |
| Msa0775660 | Msa0841050 | 0.803282 | 3.756032e-49 | -8.615850e-47 |
| Msa0776640 | Msa0841050 | 0.821496 | 3.915461e-53 | -8.615850e-47 |
| Msa0779450 | Msa0841050 | -0.800092 | 1.695270e-48 | -8.615850e-47 |
| Msa0790650 | Msa0841050 | -0.808039 | 3.767685e-50 | -8.615850e-47 |
| Msa0795750 | Msa0841050 | 0.831220 | 1.888863e-55 | -8.615850e-47 |
| Msa0802760 | Msa0841050 | 0.936412 | 1.809533e-97 | -8.615850e-47 |
| Msa0812020 | Msa0841050 | -0.817982 | 2.486048e-52 | -8.615850e-47 |
| Msa0821530 | Msa0841050 | 0.830801 | 2.393476e-55 | -8.615850e-47 |
| Msa0823480 | Msa0841050 | -0.815658 | 8.260562e-52 | -8.615850e-47 |
| Msa0825920 | Msa0841050 | 0.818355 | 2.047109e-52 | -8.615850e-47 |
| Msa0827340 | Msa0841050 | -0.800460 | 1.426425e-48 | -8.615850e-47 |
| Msa0828960 | Msa0841050 | 0.806178 | 9.333408e-50 | -8.615850e-47 |
| Msa0833200 | Msa0841050 | -0.807028 | 6.174236e-50 | -8.615850e-47 |
| Msa0840520 | Msa0841050 | 0.809083 | 2.254558e-50 | -8.615850e-47 |
| Msa0841050 | Msa0852090 | -0.808346 | 3.239499e-50 | -8.615850e-47 |
| Msa0841050 | Msa0853590 | 0.816405 | 5.625343e-52 | -8.615850e-47 |
| Msa0841050 | Msa0862480 | -0.827183 | 1.800644e-54 | -8.615850e-47 |
| Msa0841050 | Msa0865420 | 0.819871 | 9.249666e-53 | -8.615850e-47 |
| Msa0841050 | Msa0903590 | -0.800727 | 1.258076e-48 | -8.615850e-47 |
| Msa0841050 | Msa0909260 | 0.801835 | 7.464775e-49 | -8.615850e-47 |
| Msa0841050 | Msa0910170 | 0.802477 | 5.507229e-49 | -8.615850e-47 |
| Msa0841050 | Msa0930770 | 0.810826 | 9.502546e-51 | -8.615850e-47 |
| Msa0841050 | Msa0941150 | -0.801835 | 7.463189e-49 | -8.615850e-47 |
| Msa0841050 | Msa0964400 | -0.806813 | 6.854034e-50 | -8.615850e-47 |
| Msa0841050 | Msa0973080 | -0.808977 | 2.375407e-50 | -8.615850e-47 |
| Msa0841050 | Msa0982730 | 0.803430 | 3.498745e-49 | -8.615850e-47 |
| Msa0841050 | Msa1002550 | -0.800262 | 1.565267e-48 | -8.615850e-47 |
| Msa0841050 | Msa1014550 | -0.820176 | 7.877984e-53 | -8.615850e-47 |
| Msa0841050 | Msa1015360 | 0.801856 | 7.392322e-49 | -8.615850e-47 |
| Msa0841050 | Msa1022420 | 0.808049 | 3.747726e-50 | -8.615850e-47 |
| Msa0841050 | Msa1039440 | -0.824543 | 7.623472e-54 | -8.615850e-47 |
| Msa0841050 | Msa1042300 | 0.816699 | 4.834164e-52 | -8.615850e-47 |
| Msa0841050 | Msa1044250 | 0.827083 | 1.902982e-54 | -8.615850e-47 |
| Msa0841050 | Msa1078280 | -0.808358 | 3.220894e-50 | -8.615850e-47 |
| Msa0841050 | Msa1106730 | -0.801770 | 7.698359e-49 | -8.615850e-47 |
| Msa0841050 | Msa1123490 | -0.803295 | 3.731358e-49 | -8.615850e-47 |
| Msa0841050 | Msa1128520 | -0.806919 | 6.509366e-50 | -8.615850e-47 |
| Msa0841050 | Msa1129120 | -0.806801 | 6.893937e-50 | -8.615850e-47 |
| Msa0841050 | Msa1130060 | 0.800186 | 1.621976e-48 | -8.615850e-47 |
| Msa0841050 | Msa1149910 | 0.813344 | 2.684327e-51 | -8.615850e-47 |
| Msa0841050 | Msa1154320 | 0.811295 | 7.518302e-51 | -8.615850e-47 |
| Msa0841050 | Msa1165460 | 0.813079 | 3.068728e-51 | -8.615850e-47 |
| Msa0841050 | Msa1184680 | 0.834271 | 3.301598e-56 | -8.615850e-47 |
| Msa0841050 | Msa1191530 | -0.817743 | 2.814442e-52 | -8.615850e-47 |
| Msa0841050 | Msa1199700 | -0.804032 | 2.624003e-49 | -8.615850e-47 |
| Msa0841050 | Msa1209990 | -0.808654 | 2.784929e-50 | -8.615850e-47 |
| Msa0841050 | Msa1212150 | -0.803979 | 2.691432e-49 | -8.615850e-47 |
| Msa0841050 | Msa1221120 | 0.804169 | 2.458182e-49 | -8.615850e-47 |
| Msa0841050 | Msa1221130 | 0.830668 | 2.579096e-55 | -8.615850e-47 |
| Msa0841050 | Msa1223540 | 0.806297 | 8.807153e-50 | -8.615850e-47 |
| Msa0841050 | Msa1265450 | 0.803983 | 2.686560e-49 | -8.615850e-47 |
| Msa0841050 | Msa1266120 | -0.831979 | 1.227504e-55 | -8.615850e-47 |
| Msa0841050 | Msa1279250 | -0.806099 | 9.695487e-50 | -8.615850e-47 |
| Msa0841050 | Msa1286860 | -0.807332 | 5.323201e-50 | -8.615850e-47 |
| Msa0841050 | Msa1295210 | -0.812638 | 3.833042e-51 | -8.615850e-47 |
| Msa0841050 | Msa1295480 | -0.845344 | 4.307551e-59 | -8.615850e-47 |
| Msa0841050 | Msa1298480 | -0.808553 | 2.927193e-50 | -8.615850e-47 |
| Msa0841050 | Msa1331720 | -0.808237 | 3.418853e-50 | -8.615850e-47 |
| Msa0841050 | Msa1336020 | 0.813645 | 2.304390e-51 | -8.615850e-47 |
| Msa0841050 | Msa1348170 | -0.814114 | 1.816374e-51 | -8.615850e-47 |
| Msa0841050 | Msa1352600 | -0.813384 | 2.630868e-51 | -8.615850e-47 |
| Msa0841050 | Msa1366140 | -0.817997 | 2.466538e-52 | -8.615850e-47 |
| Msa0841050 | Msa1368390 | 0.814979 | 1.169329e-51 | -8.615850e-47 |
| Msa0841050 | Msa1372000 | 0.810651 | 1.036860e-50 | -8.615850e-47 |
| Msa0841050 | Msa1381870 | -0.805239 | 1.469712e-49 | -8.615850e-47 |
| Msa0841050 | Msa1386180 | -0.809708 | 1.655551e-50 | -8.615850e-47 |
| Msa0841050 | Msa1386910 | -0.805511 | 1.288580e-49 | -8.615850e-47 |
| Msa0841050 | Msa1387450 | -0.824613 | 7.341934e-54 | -8.615850e-47 |
| Msa0841050 | Msa1388720 | -0.806469 | 8.101305e-50 | -8.615850e-47 |
| Msa0841050 | Msa1391500 | 0.804222 | 2.395966e-49 | -8.615850e-47 |
| Msa0841050 | Msa1396200 | -0.809413 | 1.915963e-50 | -8.615850e-47 |
| Msa0841050 | Msa1401300 | 0.840397 | 8.914219e-58 | -8.615850e-47 |
| Msa0841050 | Msa1405830 | 0.814719 | 1.335297e-51 | -8.615850e-47 |
| Msa0841050 | Msa1407810 | 0.828093 | 1.088828e-54 | -8.615850e-47 |
| Msa0841050 | Msa1407840 | 0.802306 | 5.972407e-49 | -8.615850e-47 |
| Msa0841050 | Msa1412330 | -0.807382 | 5.193687e-50 | -8.615850e-47 |
| Msa0841050 | Msa1412800 | -0.802651 | 5.071680e-49 | -8.615850e-47 |
| Msa0841050 | Msa1421520 | -0.817879 | 2.623322e-52 | -8.615850e-47 |
| Msa0841050 | Msa1421630 | 0.834301 | 3.243831e-56 | -8.615850e-47 |
| Msa0841050 | Msa1422860 | 0.851704 | 7.460775e-61 | -8.615850e-47 |
| Msa0841050 | Msa1428230 | -0.862662 | 4.323207e-64 | -8.615850e-47 |
| Msa0841050 | Msa1433360 | 0.826823 | 2.195671e-54 | -8.615850e-47 |
| Msa0841050 | Msa1435950 | -0.819738 | 9.918399e-53 | -8.615850e-47 |
| Msa0841050 | Msa1436620 | 0.805426 | 1.342691e-49 | -8.615850e-47 |
| Msa0841050 | Msa1437780 | 0.827167 | 1.817001e-54 | -8.615850e-47 |
| Msa0841050 | Msa1437810 | 0.801697 | 7.969254e-49 | -8.615850e-47 |
| Msa0841050 | Msa1451910 | -0.827747 | 1.318665e-54 | -8.615850e-47 |
| Msa0121320 | Msa0841050 | 0.817108 | 3.913209e-52 | -8.615850e-47 |
| Msa0122170 | Msa0841050 | -0.802439 | 5.608662e-49 | -8.615850e-47 |
| Msa0129930 | Msa0841050 | -0.813965 | 1.959083e-51 | -8.615850e-47 |
| Msa0133140 | Msa0841050 | -0.817481 | 3.225038e-52 | -8.615850e-47 |
| Msa0136180 | Msa0841050 | -0.801136 | 1.037974e-48 | -8.615850e-47 |
| Msa0142430 | Msa0841050 | 0.801630 | 8.223984e-49 | -8.615850e-47 |
| Msa0151380 | Msa0841050 | -0.803747 | 3.007586e-49 | -8.615850e-47 |
| Msa0151510 | Msa0841050 | -0.811476 | 6.869765e-51 | -8.615850e-47 |
| Msa0154880 | Msa0841050 | -0.814429 | 1.548082e-51 | -8.615850e-47 |
| Msa0154890 | Msa0841050 | -0.840123 | 1.050737e-57 | -8.615850e-47 |
| Msa0165640 | Msa0841050 | 0.851662 | 7.667117e-61 | -8.615850e-47 |
| Msa0166180 | Msa0841050 | 0.806956 | 6.394545e-50 | -8.615850e-47 |
| Msa0178440 | Msa0841050 | -0.805904 | 1.065881e-49 | -8.615850e-47 |
| Msa0183310 | Msa0841050 | -0.849662 | 2.801159e-60 | -8.615850e-47 |
| Msa0189560 | Msa0841050 | -0.827475 | 1.533107e-54 | -8.615850e-47 |
| Msa0198990 | Msa0841050 | 0.832291 | 1.028106e-55 | -8.615850e-47 |
| Msa0203080 | Msa0841050 | 0.811216 | 7.822879e-51 | -8.615850e-47 |
| Msa0204950 | Msa0841050 | 0.804894 | 1.734993e-49 | -8.615850e-47 |
| Msa0211460 | Msa0841050 | 0.835299 | 1.819020e-56 | -8.615850e-47 |
| Msa0225790 | Msa0841050 | -0.827868 | 1.233144e-54 | -8.615850e-47 |
| Msa0227770 | Msa0841050 | -0.826180 | 3.124943e-54 | -8.615850e-47 |
| Msa0229350 | Msa0841050 | -0.806760 | 7.033909e-50 | -8.615850e-47 |
| Msa0364910 | Msa0841050 | -0.803608 | 3.213606e-49 | -8.615850e-47 |
| Msa0365210 | Msa0841050 | 0.819643 | 1.043028e-52 | -8.615850e-47 |
| Msa0371350 | Msa0841050 | -0.809318 | 2.007881e-50 | -8.615850e-47 |
| Msa0375330 | Msa0841050 | -0.800384 | 1.477987e-48 | -8.615850e-47 |
| Msa0386880 | Msa0841050 | 0.813249 | 2.816794e-51 | -8.615850e-47 |
| Msa0388210 | Msa0841050 | 0.809658 | 1.697531e-50 | -8.615850e-47 |
| Msa0412580 | Msa0841050 | -0.807120 | 5.904158e-50 | -8.615850e-47 |
| Msa0437440 | Msa0841050 | -0.827986 | 1.155531e-54 | -8.615850e-47 |
| Msa0438680 | Msa0841050 | -0.804257 | 2.356279e-49 | -8.615850e-47 |
| Msa0457070 | Msa0841050 | -0.805188 | 1.506094e-49 | -8.615850e-47 |
| Msa0467330 | Msa0841050 | 0.805850 | 1.094012e-49 | -8.615850e-47 |
| Msa0474660 | Msa0841050 | -0.809872 | 1.526473e-50 | -8.615850e-47 |
| Msa0241750 | Msa0841050 | 0.855960 | 4.440291e-62 | -8.615850e-47 |
| Msa0258910 | Msa0841050 | 0.804392 | 2.208700e-49 | -8.615850e-47 |
| Msa0260580 | Msa0841050 | -0.821716 | 3.483133e-53 | -8.615850e-47 |
| Msa0260640 | Msa0841050 | -0.819295 | 1.251634e-52 | -8.615850e-47 |
| Msa0260870 | Msa0841050 | -0.821317 | 4.305961e-53 | -8.615850e-47 |
| Msa0261350 | Msa0841050 | -0.803962 | 2.714287e-49 | -8.615850e-47 |
| Msa0267450 | Msa0841050 | -0.830600 | 2.680250e-55 | -8.615850e-47 |
| Msa0267510 | Msa0841050 | -0.831489 | 1.622109e-55 | -8.615850e-47 |
| Msa0269220 | Msa0841050 | -0.821235 | 4.497656e-53 | -8.615850e-47 |
| Msa0276800 | Msa0841050 | -0.802174 | 6.359440e-49 | -8.615850e-47 |
| Msa0279810 | Msa0841050 | 0.814796 | 1.283941e-51 | -8.615850e-47 |
| Msa0284800 | Msa0841050 | 0.820389 | 7.037289e-53 | -8.615850e-47 |
| Msa0290800 | Msa0841050 | 0.802219 | 6.223285e-49 | -8.615850e-47 |
| Msa0298670 | Msa0841050 | -0.827297 | 1.691325e-54 | -8.615850e-47 |
| Msa0299130 | Msa0841050 | -0.807006 | 6.239102e-50 | -8.615850e-47 |
| Msa0307430 | Msa0841050 | 0.828817 | 7.279684e-55 | -8.615850e-47 |
| Msa0313900 | Msa0841050 | 0.806787 | 6.943769e-50 | -8.615850e-47 |
| Msa0316720 | Msa0841050 | -0.802427 | 5.638963e-49 | -8.615850e-47 |
| Msa0319220 | Msa0841050 | 0.819388 | 1.192253e-52 | -8.615850e-47 |
| Msa0320600 | Msa0841050 | 0.809183 | 2.146029e-50 | -8.615850e-47 |
| Msa0326170 | Msa0841050 | -0.853721 | 1.981761e-61 | -8.615850e-47 |
| Msa0328870 | Msa0841050 | 0.800348 | 1.503565e-48 | -8.615850e-47 |
| Msa0330520 | Msa0841050 | 0.803110 | 4.076334e-49 | -8.615850e-47 |
| Msa0331070 | Msa0841050 | -0.828489 | 8.738019e-55 | -8.615850e-47 |
| Msa0340700 | Msa0841050 | -0.812156 | 4.885301e-51 | -8.615850e-47 |
| Msa0506750 | Msa0841050 | 0.820147 | 7.997075e-53 | -8.615850e-47 |
| Msa0525180 | Msa0841050 | -0.806520 | 7.904509e-50 | -8.615850e-47 |
| Msa0526150 | Msa0841050 | 0.803609 | 3.212581e-49 | -8.615850e-47 |
| Msa0528180 | Msa0841050 | 0.815952 | 7.101313e-52 | -8.615850e-47 |
| Msa0548260 | Msa0841050 | -0.802836 | 4.643701e-49 | -8.615850e-47 |
| Msa0549130 | Msa0841050 | 0.808124 | 3.613186e-50 | -8.615850e-47 |
| Msa0556450 | Msa0841050 | -0.808394 | 3.164109e-50 | -8.615850e-47 |
| Msa0567330 | Msa0841050 | 0.836157 | 1.102864e-56 | -8.615850e-47 |
| Msa0567570 | Msa0841050 | 0.818725 | 1.687248e-52 | -8.615850e-47 |
| Msa0567610 | Msa0841050 | 0.800920 | 1.149264e-48 | -8.615850e-47 |
| Msa0574900 | Msa0841050 | 0.802777 | 4.776506e-49 | -8.615850e-47 |
| Msa0576320 | Msa0841050 | 0.833047 | 6.674053e-56 | -8.615850e-47 |
| Msa0579160 | Msa0841050 | 0.800575 | 1.351596e-48 | -8.615850e-47 |
| Msa0579220 | Msa0841050 | 0.803037 | 4.220901e-49 | -8.615850e-47 |
| Msa0590620 | Msa0841050 | -0.809676 | 1.681705e-50 | -8.615850e-47 |
| Msa0601380 | Msa0841050 | 0.839065 | 1.980426e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841050 | MtrunA17_Chr5g0410651 | 94.576 | 295 | 2 | 1 | 1 | 281 | 1 | 295 | 0.0 | 573 |
| Msa0841050 | MtrunA17_Chr4g0074441 | 56.463 | 294 | 103 | 5 | 1 | 276 | 1 | 287 | 1.51e-115 | 335 |
| Msa0841050 | MtrunA17_Chr7g0226551 | 55.678 | 273 | 102 | 2 | 1 | 259 | 1 | 268 | 1.17e-109 | 323 |
| Msa0841050 | MtrunA17_Chr3g0116571 | 52.805 | 303 | 123 | 4 | 1 | 288 | 1 | 298 | 6.88e-109 | 322 |
| Msa0841050 | MtrunA17_Chr7g0220431 | 56.884 | 276 | 94 | 3 | 1 | 259 | 1 | 268 | 5.61e-105 | 312 |
| Msa0841050 | MtrunA17_Chr6g0457861 | 51.447 | 311 | 125 | 5 | 1 | 285 | 1 | 311 | 4.20e-101 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0841050 | AT1G32190.1 | 73.826 | 298 | 60 | 2 | 1 | 280 | 1 | 298 | 8.95e-155 | 440 |
| Msa0841050 | AT2G24320.2 | 52.862 | 297 | 117 | 4 | 1 | 280 | 1 | 291 | 3.97e-113 | 330 |
| Msa0841050 | AT4G24760.1 | 52.787 | 305 | 120 | 4 | 1 | 291 | 1 | 295 | 1.48e-111 | 328 |
| Msa0841050 | AT3G30380.2 | 58.582 | 268 | 91 | 3 | 1 | 254 | 1 | 262 | 8.54e-111 | 327 |
| Msa0841050 | AT2G24320.1 | 53.103 | 290 | 113 | 4 | 8 | 280 | 1 | 284 | 9.32e-111 | 323 |
| Msa0841050 | AT3G30380.1 | 58.582 | 268 | 91 | 3 | 1 | 254 | 1 | 262 | 1.87e-110 | 327 |
| Msa0841050 | AT4G31020.2 | 55.351 | 271 | 100 | 3 | 1 | 256 | 1 | 265 | 2.99e-109 | 320 |
| Msa0841050 | AT4G31020.1 | 55.351 | 271 | 100 | 3 | 1 | 256 | 1 | 265 | 2.99e-109 | 320 |
| Msa0841050 | AT3G01690.1 | 51.299 | 308 | 112 | 4 | 1 | 275 | 1 | 303 | 4.63e-106 | 314 |
| Msa0841050 | AT1G66900.1 | 56.364 | 275 | 98 | 4 | 1 | 259 | 1 | 269 | 2.49e-105 | 309 |
| Msa0841050 | AT5G14390.1 | 51.290 | 310 | 111 | 5 | 1 | 275 | 1 | 305 | 8.33e-105 | 311 |
| Msa0841050 | AT5G38220.3 | 55.970 | 268 | 97 | 4 | 1 | 254 | 1 | 261 | 6.34e-103 | 305 |
| Msa0841050 | AT5G38220.1 | 55.970 | 268 | 97 | 4 | 1 | 254 | 1 | 261 | 6.34e-103 | 305 |
| Msa0841050 | AT1G32190.2 | 79.661 | 177 | 36 | 0 | 104 | 280 | 37 | 213 | 2.65e-101 | 301 |
| Msa0841050 | AT1G13610.1 | 51.020 | 294 | 125 | 4 | 1 | 280 | 1 | 289 | 1.12e-96 | 290 |
| Msa0841050 | AT5G38220.2 | 55.869 | 213 | 73 | 4 | 1 | 199 | 1 | 206 | 2.83e-73 | 226 |
| Msa0841050 | AT1G13610.2 | 55.497 | 191 | 79 | 2 | 90 | 280 | 5 | 189 | 3.83e-65 | 206 |
Find 88 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACACAGCGGCATTCTTTC+TGG | 0.128334 | 5_4:+16975532 | Msa0841050:CDS |
| CAACTTGGTCTTGAACATTT+AGG | 0.151307 | 5_4:-16977643 | None:intergenic |
| TTGTCATCTTCTCCATTTCT+TGG | 0.196441 | 5_4:-16977255 | None:intergenic |
| CATGGCAATGCTGCTGATTT+AGG | 0.205462 | 5_4:+16973304 | Msa0841050:CDS |
| TTCCTGGCCAACTCCATATT+TGG | 0.237019 | 5_4:-16975425 | None:intergenic |
| CAACAAGGCAATGAACATTT+TGG | 0.250347 | 5_4:-16977616 | None:intergenic |
| CCGAAGTTCACAGATTGTTT+TGG | 0.276283 | 5_4:+16977550 | Msa0841050:CDS |
| AACTTGGTCTTGAACATTTA+GGG | 0.297120 | 5_4:-16977642 | None:intergenic |
| CTTGGATGAATTTGCATAGA+TGG | 0.300293 | 5_4:-16977237 | None:intergenic |
| GAATGCCTTGAAACCAAATA+TGG | 0.310658 | 5_4:+16975412 | Msa0841050:CDS |
| TGATCTCTTTGTTCAACTTA+AGG | 0.314107 | 5_4:+16973336 | Msa0841050:CDS |
| CATAGATGGCGTATGTAATC+AGG | 0.321303 | 5_4:-16977223 | None:intergenic |
| TGGCAACCGACTATGGAAAA+TGG | 0.324511 | 5_4:+16977138 | Msa0841050:CDS |
| GGTTACATGGCAACCGACTA+TGG | 0.328727 | 5_4:+16977131 | Msa0841050:CDS |
| ATGAGAGGTGGTGGAGTTGC+AGG | 0.330521 | 5_4:-16972908 | None:intergenic |
| CAGGAAGACGTAATCTTATA+CGG | 0.331817 | 5_4:+16975442 | Msa0841050:CDS |
| AGCAAAGTTAATCTTGCATA+AGG | 0.341545 | 5_4:-16973274 | None:intergenic |
| ACTTAGAGAAAATTTCAAAA+TGG | 0.355639 | 5_4:-16973002 | None:intergenic |
| CAACTCCATATTTGGTTTCA+AGG | 0.370723 | 5_4:-16975417 | None:intergenic |
| GGGAGTCATATGAACCCTTA+TGG | 0.381353 | 5_4:+16977164 | Msa0841050:CDS |
| ATTATAGCATAAGGTTCAAA+AGG | 0.384795 | 5_4:+16972978 | Msa0841050:five_prime_UTR |
| ATGCAAATTCATCCAAGAAA+TGG | 0.386608 | 5_4:+16977243 | Msa0841050:CDS |
| CGTATAAGATTACGTCTTCC+TGG | 0.406105 | 5_4:-16975441 | None:intergenic |
| CCACAAATTATTATAGCATA+AGG | 0.418270 | 5_4:+16972969 | Msa0841050:five_prime_UTR |
| ACCGCCTCCTTTGATCCATA+AGG | 0.421520 | 5_4:-16977179 | None:intergenic |
| CCGCCTCCTTTGATCCATAA+GGG | 0.422572 | 5_4:-16977178 | None:intergenic |
| GCAAAGTTAATCTTGCATAA+GGG | 0.428314 | 5_4:-16973273 | None:intergenic |
| CCTTATGCTATAATAATTTG+TGG | 0.434691 | 5_4:-16972969 | None:intergenic |
| ATCTTATACGGGCAATCAGT+TGG | 0.448134 | 5_4:+16975454 | Msa0841050:CDS |
| TTAACTTTGCTTTATTCTCA+TGG | 0.455196 | 5_4:+16973286 | Msa0841050:CDS |
| AAGTGGACCAACATTGCATT+TGG | 0.456630 | 5_4:+16975477 | Msa0841050:CDS |
| TTCTTCAGCTGATACGTTGG+TGG | 0.465989 | 5_4:-16973121 | None:intergenic |
| TGGTTTGTGATGAGAGGTGG+TGG | 0.476264 | 5_4:-16972917 | None:intergenic |
| TTATCATCAGGATGAGGAAT+CGG | 0.478365 | 5_4:-16973184 | None:intergenic |
| CAGAAGATGACGTAGTCAAT+TGG | 0.479966 | 5_4:+16977110 | Msa0841050:CDS |
| TCATCCTGATGATAACTCAT+TGG | 0.484592 | 5_4:+16973192 | Msa0841050:CDS |
| CTTCTTGTTGACACAAAACA+TGG | 0.495893 | 5_4:+16973220 | Msa0841050:CDS |
| TGTAGTACAGTGAGAAGATG+TGG | 0.498894 | 5_4:-16972758 | None:intergenic |
| AGCTGATACGTTGGTGGTGA+AGG | 0.499741 | 5_4:-16973115 | None:intergenic |
| CTTACATGTATTACAAGGAC+AGG | 0.499842 | 5_4:-16976018 | None:intergenic |
| ACATCCAATGAGTTATCATC+AGG | 0.502138 | 5_4:-16973196 | None:intergenic |
| ATTTACTTACATGTATTACA+AGG | 0.507529 | 5_4:-16976023 | None:intergenic |
| TTCTTCTTCAGCTGATACGT+TGG | 0.513005 | 5_4:-16973124 | None:intergenic |
| CTTATGCTATAATAATTTGT+GGG | 0.516767 | 5_4:-16972968 | None:intergenic |
| GTTGCAGCAGAAACTAGTTA+TGG | 0.519208 | 5_4:-16972792 | None:intergenic |
| CTCTATGTCAGCATATGTGC+TGG | 0.520235 | 5_4:-16975380 | None:intergenic |
| AACCAAATATGGAGTTGGCC+AGG | 0.523037 | 5_4:+16975423 | Msa0841050:CDS |
| AATCTCAGAGTTAATCTCAT+GGG | 0.526908 | 5_4:+16973361 | Msa0841050:CDS |
| AAACAACTCATGCAACAACT+TGG | 0.530466 | 5_4:-16977658 | None:intergenic |
| TGCTATAATAATTTGTGGGT+AGG | 0.531642 | 5_4:-16972964 | None:intergenic |
| GGTACAGTGATGATGAGAAT+AGG | 0.531675 | 5_4:-16972886 | None:intergenic |
| GAACATCAACAAAATAAAGA+AGG | 0.540351 | 5_4:+16975987 | Msa0841050:intron |
| TACGGGCAATCAGTTGGAAG+TGG | 0.541674 | 5_4:+16975460 | Msa0841050:CDS |
| TGTTGGTTTGTGATGAGAGG+TGG | 0.548156 | 5_4:-16972920 | None:intergenic |
| TTAGCTGCCAAATGCAATGT+TGG | 0.556035 | 5_4:-16975484 | None:intergenic |
| CTTGAAACCAAATATGGAGT+TGG | 0.559208 | 5_4:+16975418 | Msa0841050:CDS |
| CAGCTGAAGAAGAATGATGA+TGG | 0.561573 | 5_4:+16973133 | Msa0841050:CDS |
| GACGTAGTCAATTGGTTACA+TGG | 0.564056 | 5_4:+16977118 | Msa0841050:CDS |
| TTATAGCATAAGGTTCAAAA+GGG | 0.565001 | 5_4:+16972979 | Msa0841050:five_prime_UTR |
| TATGAACCCTTATGGATCAA+AGG | 0.569011 | 5_4:+16977172 | Msa0841050:CDS |
| AATCTCTGCAACTTTCAAGT+GGG | 0.571956 | 5_4:+16972844 | Msa0841050:five_prime_UTR |
| TGTGTGATGAATGGGTTGCA+TGG | 0.573626 | 5_4:+16973057 | Msa0841050:exon |
| CCAAAACAATCTGTGAACTT+CGG | 0.579808 | 5_4:-16977550 | None:intergenic |
| AAATCTCTGCAACTTTCAAG+TGG | 0.581026 | 5_4:+16972843 | Msa0841050:five_prime_UTR |
| AGGAAGACGTAATCTTATAC+GGG | 0.584093 | 5_4:+16975443 | Msa0841050:CDS |
| CAGCACATATGCTGACATAG+AGG | 0.584108 | 5_4:+16975381 | Msa0841050:CDS |
| ACCGACTATGGAAAATGGCA+AGG | 0.593180 | 5_4:+16977143 | Msa0841050:CDS |
| CCCTTATGGATCAAAGGAGG+CGG | 0.604217 | 5_4:+16977178 | Msa0841050:CDS |
| AGAACCACGCCTCTCAGCCT+CGG | 0.605262 | 5_4:-16975511 | None:intergenic |
| AATGAGTTATCATCAGGATG+AGG | 0.605904 | 5_4:-16973190 | None:intergenic |
| TAATCTCAGAGTTAATCTCA+TGG | 0.609130 | 5_4:+16973360 | Msa0841050:CDS |
| ATCTCAGAGTTAATCTCATG+GGG | 0.613897 | 5_4:+16973362 | Msa0841050:CDS |
| ATAGATGGCGTATGTAATCA+GGG | 0.614420 | 5_4:-16977222 | None:intergenic |
| ATCTCTGCAACTTTCAAGTG+GGG | 0.619601 | 5_4:+16972845 | Msa0841050:five_prime_UTR |
| ATGAGGAATCGGAGACGCGG+TGG | 0.623975 | 5_4:-16973173 | None:intergenic |
| AATCTGTGAACTTCGGTAAG+CGG | 0.623999 | 5_4:-16977543 | None:intergenic |
| GAATGATGATGGCAAACTCA+CGG | 0.632646 | 5_4:+16973144 | Msa0841050:CDS |
| GTTACCGAGGCTGAGAGGCG+TGG | 0.644100 | 5_4:+16975507 | Msa0841050:CDS |
| GAACATTTAGGGTAGCAACA+AGG | 0.657420 | 5_4:-16977631 | None:intergenic |
| GCTAAGTTACCGAGGCTGAG+AGG | 0.669433 | 5_4:+16975502 | Msa0841050:CDS |
| TGATACGTTGGTGGTGAAGG+TGG | 0.669917 | 5_4:-16973112 | None:intergenic |
| TGAGAGGTGGTGGAGTTGCA+GGG | 0.670313 | 5_4:-16972907 | None:intergenic |
| CCGACTATGGAAAATGGCAA+GGG | 0.671837 | 5_4:+16977144 | Msa0841050:CDS |
| ATTTGGCAGCTAAGTTACCG+AGG | 0.676887 | 5_4:+16975494 | Msa0841050:CDS |
| GAACCCTTATGGATCAAAGG+AGG | 0.684609 | 5_4:+16977175 | Msa0841050:CDS |
| AGGATGAGGAATCGGAGACG+CGG | 0.692644 | 5_4:-16973176 | None:intergenic |
| AGAGGCGTGGTTCTACACAG+CGG | 0.771216 | 5_4:+16975520 | Msa0841050:CDS |
| TGATGATGGCAAACTCACGG+TGG | 0.774722 | 5_4:+16973147 | Msa0841050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTGTAAATTATATATTT+TGG | + | chr5_4:16975789-16975808 | Msa0841050:intron | 10.0% |
| !!! | AAAATTTGAACTTTTTTTGT+TGG | - | chr5_4:16972940-16972959 | None:intergenic | 15.0% |
| !! | CAACAAAAATATAGTTTATT+TGG | + | chr5_4:16973626-16973645 | Msa0841050:intron | 15.0% |
| !!! | ATTTTTTGTTTGTTTGTTTA+GGG | - | chr5_4:16974059-16974078 | None:intergenic | 15.0% |
| !!! | TTTAATTCTAATGCTTTAAA+AGG | - | chr5_4:16974411-16974430 | None:intergenic | 15.0% |
| !!! | ATTTTATAGAATCAATTCAT+TGG | + | chr5_4:16974702-16974721 | Msa0841050:intron | 15.0% |
| !! | AATTTATACAAAAGCTAAAT+GGG | - | chr5_4:16974859-16974878 | None:intergenic | 15.0% |
| !! | AAATTTATACAAAAGCTAAA+TGG | - | chr5_4:16974860-16974879 | None:intergenic | 15.0% |
| !! | TAAATTATAAAAGTGAGTTT+CGG | + | chr5_4:16975861-16975880 | Msa0841050:intron | 15.0% |
| !! | AAAAAAAAAATGTCAACTAT+AGG | - | chr5_4:16976880-16976899 | None:intergenic | 15.0% |
| !!! | AATGTATTTAGAATATAAAC+TGG | - | chr5_4:16976914-16976933 | None:intergenic | 15.0% |
| !! | TTTATATTCTAAATACATTG+AGG | + | chr5_4:16976915-16976934 | Msa0841050:intron | 15.0% |
| !!! | TGAGAATAGGATTTTTTTTT+TGG | - | chr5_4:16972876-16972895 | None:intergenic | 20.0% |
| !!! | CTTATGCTATAATAATTTGT+GGG | - | chr5_4:16972971-16972990 | None:intergenic | 20.0% |
| !! | ACTTAGAGAAAATTTCAAAA+TGG | - | chr5_4:16973005-16973024 | None:intergenic | 20.0% |
| !!! | GATTAATTTGCAAAACATAA+GGG | - | chr5_4:16973405-16973424 | None:intergenic | 20.0% |
| !!! | TGATTAATTTGCAAAACATA+AGG | - | chr5_4:16973406-16973425 | None:intergenic | 20.0% |
| !! | ATCAAGATAATACAAAACAA+GGG | - | chr5_4:16973577-16973596 | None:intergenic | 20.0% |
| !!! | TATAGTTTATTTGGTTTTAG+TGG | + | chr5_4:16973635-16973654 | Msa0841050:intron | 20.0% |
| !!! | ATAGTTTATTTGGTTTTAGT+GGG | + | chr5_4:16973636-16973655 | Msa0841050:intron | 20.0% |
| !! | TATTATGTTAATCTATGCAT+TGG | + | chr5_4:16973686-16973705 | Msa0841050:intron | 20.0% |
| !!! | CATTTTTTGTTTGTTTGTTT+AGG | - | chr5_4:16974060-16974079 | None:intergenic | 20.0% |
| !! | ATGAAAAAGTTAAAGTGAAA+AGG | + | chr5_4:16974077-16974096 | Msa0841050:intron | 20.0% |
| !! | AAATTGAGAAAGTAAAACAA+AGG | - | chr5_4:16974241-16974260 | None:intergenic | 20.0% |
| !!! | CTTTAAAAGGAAAATAATGT+TGG | - | chr5_4:16974398-16974417 | None:intergenic | 20.0% |
| !! | GAAAATGATAAATGTATGTT+TGG | + | chr5_4:16974431-16974450 | Msa0841050:intron | 20.0% |
| !! | AATAGTAAATCGAATGTAAA+GGG | - | chr5_4:16974671-16974690 | None:intergenic | 20.0% |
| !! | TAATAGTAAATCGAATGTAA+AGG | - | chr5_4:16974672-16974691 | None:intergenic | 20.0% |
| !! | TTTACATTCGATTTACTATT+AGG | + | chr5_4:16974671-16974690 | Msa0841050:intron | 20.0% |
| !! | GAACTTCAAATCAATAATAA+TGG | - | chr5_4:16974837-16974856 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTGACATTTATA+AGG | + | chr5_4:16975585-16975604 | Msa0841050:CDS | 20.0% |
| !! | TTTGACATTTATAAGGTAAT+AGG | + | chr5_4:16975592-16975611 | Msa0841050:intron | 20.0% |
| !!! | TTTTTTAAGATGCCATTATT+TGG | + | chr5_4:16975686-16975705 | Msa0841050:intron | 20.0% |
| !! | TTAACTCAAATTCCAAATAA+TGG | - | chr5_4:16975701-16975720 | None:intergenic | 20.0% |
| !! | ATGTGTCTTTCATTTATTAA+TGG | + | chr5_4:16975829-16975848 | Msa0841050:intron | 20.0% |
| !! | ATTTACTTACATGTATTACA+AGG | - | chr5_4:16976026-16976045 | None:intergenic | 20.0% |
| !!! | TTTAAACATGCTACAATTTT+AGG | - | chr5_4:16977010-16977029 | None:intergenic | 20.0% |
| ! | CCTTATGCTATAATAATTTG+TGG | - | chr5_4:16972972-16972991 | None:intergenic | 25.0% |
| ! | CCACAAATTATTATAGCATA+AGG | + | chr5_4:16972969-16972988 | Msa0841050:five_prime_UTR | 25.0% |
| ! | ATTATAGCATAAGGTTCAAA+AGG | + | chr5_4:16972978-16972997 | Msa0841050:five_prime_UTR | 25.0% |
| ! | TTATAGCATAAGGTTCAAAA+GGG | + | chr5_4:16972979-16972998 | Msa0841050:five_prime_UTR | 25.0% |
| !! | TTAACTTTGCTTTATTCTCA+TGG | + | chr5_4:16973286-16973305 | Msa0841050:CDS | 25.0% |
| ! | CATCAAGATAATACAAAACA+AGG | - | chr5_4:16973578-16973597 | None:intergenic | 25.0% |
| ! | TACTCTTTCTCTTTCTTATT+AGG | + | chr5_4:16973603-16973622 | Msa0841050:intron | 25.0% |
| !! | ATTGTCATTTCTTTGATGTA+TGG | - | chr5_4:16973935-16973954 | None:intergenic | 25.0% |
| ! | AAGTTAAAGTGAAAAGGAAA+AGG | + | chr5_4:16974083-16974102 | Msa0841050:intron | 25.0% |
| ! | AAAAAAGCAGCATGTATTTA+TGG | + | chr5_4:16974115-16974134 | Msa0841050:intron | 25.0% |
| !! | TACCTTTGTTTAGATTCTAT+TGG | + | chr5_4:16974162-16974181 | Msa0841050:intron | 25.0% |
| !!! | ATAATTGATTTTGACACGTT+TGG | + | chr5_4:16974494-16974513 | Msa0841050:intron | 25.0% |
| ! | GATACATTCAATGTAAAAGT+GGG | - | chr5_4:16974638-16974657 | None:intergenic | 25.0% |
| ! | GAAAGATTACAACAATTCAA+AGG | - | chr5_4:16974782-16974801 | None:intergenic | 25.0% |
| ! | ATGGCAAAGTATATTATTAC+AGG | - | chr5_4:16974818-16974837 | None:intergenic | 25.0% |
| !!! | ATTTGCTTTAGAAGTTTCAT+TGG | + | chr5_4:16974900-16974919 | Msa0841050:intron | 25.0% |
| ! | TAAAAAGTGAACATGTACAT+TGG | + | chr5_4:16974959-16974978 | Msa0841050:intron | 25.0% |
| ! | GATGTAAATCAAACCATTTA+TGG | - | chr5_4:16974986-16975005 | None:intergenic | 25.0% |
| ! | GAACATCAACAAAATAAAGA+AGG | + | chr5_4:16975987-16976006 | Msa0841050:intron | 25.0% |
| !!! | GTCTTCGTATTTATTTCTTT+TGG | + | chr5_4:16976072-16976091 | Msa0841050:intron | 25.0% |
| !!! | TTTATTTCTTTTGGCATTCA+AGG | + | chr5_4:16976081-16976100 | Msa0841050:intron | 25.0% |
| !!! | AATGATTGATTCTCTAGTTT+TGG | + | chr5_4:16976134-16976153 | Msa0841050:intron | 25.0% |
| ! | ATTTACCTCTAAATCTCTAT+TGG | + | chr5_4:16976346-16976365 | Msa0841050:intron | 25.0% |
| ! | AAAAAATAGCTTGAGTTTGT+TGG | + | chr5_4:16976531-16976550 | Msa0841050:intron | 25.0% |
| ! | TGGAATAACAACATTAGATT+TGG | - | chr5_4:16976589-16976608 | None:intergenic | 25.0% |
| !! | TCCAACACTTACTATTTTAT+TGG | + | chr5_4:16976717-16976736 | Msa0841050:intron | 25.0% |
| ! | TCCAATAAAATAGTAAGTGT+TGG | - | chr5_4:16976721-16976740 | None:intergenic | 25.0% |
| ! | CTTATTGTGTTAAATACATG+TGG | - | chr5_4:16976801-16976820 | None:intergenic | 25.0% |
| !! | ATTTAGAATATAAACTGGTG+AGG | - | chr5_4:16976909-16976928 | None:intergenic | 25.0% |
| !! | GCAGATGATAATGATTTAAT+TGG | - | chr5_4:16976968-16976987 | None:intergenic | 25.0% |
| ! | TGAGAACAAAAATGTTATGA+TGG | + | chr5_4:16977062-16977081 | Msa0841050:intron | 25.0% |
| !!! | ACATGCTAAATTATTTTGCA+GGG | + | chr5_4:16977085-16977104 | Msa0841050:intron | 25.0% |
| ! | TGCTATAATAATTTGTGGGT+AGG | - | chr5_4:16972967-16972986 | None:intergenic | 30.0% |
| ! | TTTTGTGTTGTGTGATGAAT+GGG | + | chr5_4:16973049-16973068 | Msa0841050:exon | 30.0% |
| GCAAAGTTAATCTTGCATAA+GGG | - | chr5_4:16973276-16973295 | None:intergenic | 30.0% | |
| AGCAAAGTTAATCTTGCATA+AGG | - | chr5_4:16973277-16973296 | None:intergenic | 30.0% | |
| TGATCTCTTTGTTCAACTTA+AGG | + | chr5_4:16973336-16973355 | Msa0841050:CDS | 30.0% | |
| TAATCTCAGAGTTAATCTCA+TGG | + | chr5_4:16973360-16973379 | Msa0841050:CDS | 30.0% | |
| AATCTCAGAGTTAATCTCAT+GGG | + | chr5_4:16973361-16973380 | Msa0841050:CDS | 30.0% | |
| GGATTAATTAGTCGAAATCA+CGG | + | chr5_4:16973821-16973840 | Msa0841050:intron | 30.0% | |
| ! | CTGCATAGTTTTTGCAAAAT+CGG | - | chr5_4:16973856-16973875 | None:intergenic | 30.0% |
| GTAGAAAGTAGATGAAGTTA+AGG | + | chr5_4:16974010-16974029 | Msa0841050:intron | 30.0% | |
| AAAGTGAAAAGGAAAAGGAA+AGG | + | chr5_4:16974088-16974107 | Msa0841050:intron | 30.0% | |
| AAGTGAAAAGGAAAAGGAAA+GGG | + | chr5_4:16974089-16974108 | Msa0841050:intron | 30.0% | |
| ACTACCAAGAAGAAAAAGTT+AGG | - | chr5_4:16974188-16974207 | None:intergenic | 30.0% | |
| !!! | AGAGTTTTTTGGTGTGTTTA+TGG | + | chr5_4:16974320-16974339 | Msa0841050:intron | 30.0% |
| !!! | GAGTTTTTTGGTGTGTTTAT+GGG | + | chr5_4:16974321-16974340 | Msa0841050:intron | 30.0% |
| !!! | AGTTTTTTGGTGTGTTTATG+GGG | + | chr5_4:16974322-16974341 | Msa0841050:intron | 30.0% |
| !! | GGAAAATAATGTTGGTAGTA+TGG | - | chr5_4:16974390-16974409 | None:intergenic | 30.0% |
| ! | GATAAATGTATGTTTGGTTC+CGG | + | chr5_4:16974437-16974456 | Msa0841050:intron | 30.0% |
| ! | AAGTTAGAGTCAATTTTGGA+AGG | - | chr5_4:16974545-16974564 | None:intergenic | 30.0% |
| ! | CATCAAGTTAGAGTCAATTT+TGG | - | chr5_4:16974549-16974568 | None:intergenic | 30.0% |
| TCTAACTTGATGCTAGAATT+TGG | + | chr5_4:16974557-16974576 | Msa0841050:intron | 30.0% | |
| ! | TGGGTTGAACAATAAATTTG+AGG | - | chr5_4:16974619-16974638 | None:intergenic | 30.0% |
| GGATACATTCAATGTAAAAG+TGG | - | chr5_4:16974639-16974658 | None:intergenic | 30.0% | |
| TAAGAAAATGCTTAGGTGTA+TGG | - | chr5_4:16974752-16974771 | None:intergenic | 30.0% | |
| TGTAGGATAAGAAAATGCTT+AGG | - | chr5_4:16974759-16974778 | None:intergenic | 30.0% | |
| ! | TTACAACAATTCAAAGGTGT+AGG | - | chr5_4:16974776-16974795 | None:intergenic | 30.0% |
| ! | TATTTTGTTGATGTTCTGCA+TGG | - | chr5_4:16975983-16976002 | None:intergenic | 30.0% |
| ! | TTTGGAGTTATCACTATACA+TGG | + | chr5_4:16976152-16976171 | Msa0841050:intron | 30.0% |
| ! | AAGCAATTTTCCATTAAGTG+AGG | + | chr5_4:16976262-16976281 | Msa0841050:intron | 30.0% |
| ! | AATTTTCCATTAAGTGAGGT+TGG | + | chr5_4:16976266-16976285 | Msa0841050:intron | 30.0% |
| TCTATAAATCTAACACCGAT+TGG | - | chr5_4:16976320-16976339 | None:intergenic | 30.0% | |
| ! | AGAGTTGGAACATTTGTTAA+AGG | - | chr5_4:16976402-16976421 | None:intergenic | 30.0% |
| TTACTTCTGTACAACATTGT+CGG | + | chr5_4:16976441-16976460 | Msa0841050:intron | 30.0% | |
| ! | AACATTAATGGATCGGTTTA+AGG | - | chr5_4:16976618-16976637 | None:intergenic | 30.0% |
| ! | TCCTCAAAACATTAATGGAT+CGG | - | chr5_4:16976625-16976644 | None:intergenic | 30.0% |
| TAATCTACCCCTAATTATGA+TGG | - | chr5_4:16976653-16976672 | None:intergenic | 30.0% | |
| TTTATTGGATGAAATGCACA+TGG | + | chr5_4:16976732-16976751 | Msa0841050:intron | 30.0% | |
| TTATTGGATGAAATGCACAT+GGG | + | chr5_4:16976733-16976752 | Msa0841050:intron | 30.0% | |
| !! | GACATGCTAAATTATTTTGC+AGG | + | chr5_4:16977084-16977103 | Msa0841050:intron | 30.0% |
| ATGCAAATTCATCCAAGAAA+TGG | + | chr5_4:16977243-16977262 | Msa0841050:CDS | 30.0% | |
| !!! | ATTTTGATTCCAGACTTTGT+CGG | - | chr5_4:16977303-16977322 | None:intergenic | 30.0% |
| ATCAGGACAATTGATAGATA+GGG | - | chr5_4:16977491-16977510 | None:intergenic | 30.0% | |
| AATCAGGACAATTGATAGAT+AGG | - | chr5_4:16977492-16977511 | None:intergenic | 30.0% | |
| !! | AACTTGGTCTTGAACATTTA+GGG | - | chr5_4:16977645-16977664 | None:intergenic | 30.0% |
| AAATCTCTGCAACTTTCAAG+TGG | + | chr5_4:16972843-16972862 | Msa0841050:five_prime_UTR | 35.0% | |
| ! | AATCTCTGCAACTTTCAAGT+GGG | + | chr5_4:16972844-16972863 | Msa0841050:five_prime_UTR | 35.0% |
| !!! | TTTTGTTGGTTTGTGATGAG+AGG | - | chr5_4:16972926-16972945 | None:intergenic | 35.0% |
| ! | GTTTTGTGTTGTGTGATGAA+TGG | + | chr5_4:16973048-16973067 | Msa0841050:exon | 35.0% |
| TTATCATCAGGATGAGGAAT+CGG | - | chr5_4:16973187-16973206 | None:intergenic | 35.0% | |
| AATGAGTTATCATCAGGATG+AGG | - | chr5_4:16973193-16973212 | None:intergenic | 35.0% | |
| TCATCCTGATGATAACTCAT+TGG | + | chr5_4:16973192-16973211 | Msa0841050:CDS | 35.0% | |
| ACATCCAATGAGTTATCATC+AGG | - | chr5_4:16973199-16973218 | None:intergenic | 35.0% | |
| CTTCTTGTTGACACAAAACA+TGG | + | chr5_4:16973220-16973239 | Msa0841050:CDS | 35.0% | |
| ATCTCAGAGTTAATCTCATG+GGG | + | chr5_4:16973362-16973381 | Msa0841050:CDS | 35.0% | |
| TAATACAAAACAAGGGTCAG+TGG | - | chr5_4:16973570-16973589 | None:intergenic | 35.0% | |
| !! | GTGAGTATGTGTTTTAGATC+TGG | + | chr5_4:16973745-16973764 | Msa0841050:intron | 35.0% |
| TGATGTGCATGTTTGGTATA+AGG | + | chr5_4:16973800-16973819 | Msa0841050:intron | 35.0% | |
| TTAATTAGTCGAAATCACGG+TGG | + | chr5_4:16973824-16973843 | Msa0841050:intron | 35.0% | |
| GGCCAATAGAATCTAAACAA+AGG | - | chr5_4:16974167-16974186 | None:intergenic | 35.0% | |
| !! | TTGGCCTAACTTTTTCTTCT+TGG | + | chr5_4:16974181-16974200 | Msa0841050:intron | 35.0% |
| !!! | GGACATAGCATAGAGTTTTT+TGG | + | chr5_4:16974309-16974328 | Msa0841050:intron | 35.0% |
| AAGCTTTCAAAGAACACCAA+GGG | - | chr5_4:16974354-16974373 | None:intergenic | 35.0% | |
| AAAGCTTTCAAAGAACACCA+AGG | - | chr5_4:16974355-16974374 | None:intergenic | 35.0% | |
| GAATGTAAAGGGCTTATGTT+TGG | - | chr5_4:16974660-16974679 | None:intergenic | 35.0% | |
| CATGTACATTGGTCCATAAA+TGG | + | chr5_4:16974970-16974989 | Msa0841050:intron | 35.0% | |
| AGGTATGACTATTCTGGATA+TGG | + | chr5_4:16975148-16975167 | Msa0841050:intron | 35.0% | |
| GAATGCCTTGAAACCAAATA+TGG | + | chr5_4:16975412-16975431 | Msa0841050:CDS | 35.0% | |
| ! | CAACTCCATATTTGGTTTCA+AGG | - | chr5_4:16975420-16975439 | None:intergenic | 35.0% |
| CTTGAAACCAAATATGGAGT+TGG | + | chr5_4:16975418-16975437 | Msa0841050:CDS | 35.0% | |
| CAGGAAGACGTAATCTTATA+CGG | + | chr5_4:16975442-16975461 | Msa0841050:CDS | 35.0% | |
| AGGAAGACGTAATCTTATAC+GGG | + | chr5_4:16975443-16975462 | Msa0841050:CDS | 35.0% | |
| CTTACATGTATTACAAGGAC+AGG | - | chr5_4:16976021-16976040 | None:intergenic | 35.0% | |
| CCAATGCCATAAAATCCAAT+CGG | + | chr5_4:16976302-16976321 | Msa0841050:intron | 35.0% | |
| !! | CTAACACCGATTGGATTTTA+TGG | - | chr5_4:16976311-16976330 | None:intergenic | 35.0% |
| ATCGACCAATAGAGATTTAG+AGG | - | chr5_4:16976354-16976373 | None:intergenic | 35.0% | |
| TCTAAATCTCTATTGGTCGA+TGG | + | chr5_4:16976353-16976372 | Msa0841050:intron | 35.0% | |
| ! | GTTGGAACATTTGTTAAAGG+CGG | - | chr5_4:16976399-16976418 | None:intergenic | 35.0% |
| !! | GGATCGGTTTAAGGTATTTT+TGG | - | chr5_4:16976609-16976628 | None:intergenic | 35.0% |
| ! | ACCGATCCATTAATGTTTTG+AGG | + | chr5_4:16976621-16976640 | Msa0841050:intron | 35.0% |
| CGATCTCCTCAAAACATTAA+TGG | - | chr5_4:16976630-16976649 | None:intergenic | 35.0% | |
| ACTATAGGATGCAATCAAAG+TGG | - | chr5_4:16976865-16976884 | None:intergenic | 35.0% | |
| TATGAACCCTTATGGATCAA+AGG | + | chr5_4:16977172-16977191 | Msa0841050:CDS | 35.0% | |
| ATAGATGGCGTATGTAATCA+GGG | - | chr5_4:16977225-16977244 | None:intergenic | 35.0% | |
| CTTGGATGAATTTGCATAGA+TGG | - | chr5_4:16977240-16977259 | None:intergenic | 35.0% | |
| TTGTCATCTTCTCCATTTCT+TGG | - | chr5_4:16977258-16977277 | None:intergenic | 35.0% | |
| CCAAAACAATCTGTGAACTT+CGG | - | chr5_4:16977553-16977572 | None:intergenic | 35.0% | |
| ! | CATTTTGGACAACAACAACT+AGG | - | chr5_4:16977604-16977623 | None:intergenic | 35.0% |
| ! | CAACAAGGCAATGAACATTT+TGG | - | chr5_4:16977619-16977638 | None:intergenic | 35.0% |
| !! | CAACTTGGTCTTGAACATTT+AGG | - | chr5_4:16977646-16977665 | None:intergenic | 35.0% |
| TGTAGTACAGTGAGAAGATG+TGG | - | chr5_4:16972761-16972780 | None:intergenic | 40.0% | |
| GTTGCAGCAGAAACTAGTTA+TGG | - | chr5_4:16972795-16972814 | None:intergenic | 40.0% | |
| ! | ATCTCTGCAACTTTCAAGTG+GGG | + | chr5_4:16972845-16972864 | Msa0841050:five_prime_UTR | 40.0% |
| ! | GGTACAGTGATGATGAGAAT+AGG | - | chr5_4:16972889-16972908 | None:intergenic | 40.0% |
| TTCTTCTTCAGCTGATACGT+TGG | - | chr5_4:16973127-16973146 | None:intergenic | 40.0% | |
| CAGCTGAAGAAGAATGATGA+TGG | + | chr5_4:16973133-16973152 | Msa0841050:CDS | 40.0% | |
| !! | GAATGATGATGGCAAACTCA+CGG | + | chr5_4:16973144-16973163 | Msa0841050:CDS | 40.0% |
| GTGAATGTGATGTGCATGTT+TGG | + | chr5_4:16973793-16973812 | Msa0841050:intron | 40.0% | |
| TTTGATGTATGGTATCACCG+TGG | - | chr5_4:16973924-16973943 | None:intergenic | 40.0% | |
| GTAGATGAAGTTAAGGCTTC+TGG | + | chr5_4:16974017-16974036 | Msa0841050:intron | 40.0% | |
| ! | TTCCAGTTTTTACCCCTACA+TGG | + | chr5_4:16974282-16974301 | Msa0841050:intron | 40.0% |
| ATCCATGTAGGGGTAAAAAC+TGG | - | chr5_4:16974287-16974306 | None:intergenic | 40.0% | |
| ! | TTTTTACCCCTACATGGATG+TGG | + | chr5_4:16974288-16974307 | Msa0841050:intron | 40.0% |
| !! | TTTTGGTGTGTTTATGGGGA+TGG | + | chr5_4:16974326-16974345 | Msa0841050:intron | 40.0% |
| !! | GTATGTTTGGTTCCGGTTTT+TGG | + | chr5_4:16974444-16974463 | Msa0841050:intron | 40.0% |
| ! | ATTTTGCCTCCTCCAAAAAC+CGG | - | chr5_4:16974459-16974478 | None:intergenic | 40.0% |
| ! | CAGCTTTAGTCTAGAAATGC+TGG | - | chr5_4:16975089-16975108 | None:intergenic | 40.0% |
| !!! | AACCTTTTTTTTCTTCCCGC+AGG | + | chr5_4:16975128-16975147 | Msa0841050:intron | 40.0% |
| TACCTGCGGGAAGAAAAAAA+AGG | - | chr5_4:16975133-16975152 | None:intergenic | 40.0% | |
| ATCCAGAATAGTCATACCTG+CGG | - | chr5_4:16975147-16975166 | None:intergenic | 40.0% | |
| CGTATAAGATTACGTCTTCC+TGG | - | chr5_4:16975444-16975463 | None:intergenic | 40.0% | |
| ATCTTATACGGGCAATCAGT+TGG | + | chr5_4:16975454-16975473 | Msa0841050:CDS | 40.0% | |
| AAGTGGACCAACATTGCATT+TGG | + | chr5_4:16975477-16975496 | Msa0841050:CDS | 40.0% | |
| TTAGCTGCCAAATGCAATGT+TGG | - | chr5_4:16975487-16975506 | None:intergenic | 40.0% | |
| TGTTCTGCATGGTTGGAAAA+GGG | - | chr5_4:16975972-16975991 | None:intergenic | 40.0% | |
| ATGTTCTGCATGGTTGGAAA+AGG | - | chr5_4:16975973-16975992 | None:intergenic | 40.0% | |
| TTGTTGATGTTCTGCATGGT+TGG | - | chr5_4:16975979-16975998 | None:intergenic | 40.0% | |
| ATGAAATTCAAGCAGGATGG+TGG | - | chr5_4:16976192-16976211 | None:intergenic | 40.0% | |
| ACCATCCTGCTTGAATTTCA+TGG | + | chr5_4:16976191-16976210 | Msa0841050:intron | 40.0% | |
| ACCATGAAATTCAAGCAGGA+TGG | - | chr5_4:16976195-16976214 | None:intergenic | 40.0% | |
| AGCTACCATGAAATTCAAGC+AGG | - | chr5_4:16976199-16976218 | None:intergenic | 40.0% | |
| GCTTGAATTTCATGGTAGCT+AGG | + | chr5_4:16976199-16976218 | Msa0841050:intron | 40.0% | |
| ATGTAGCCAACCTCACTTAA+TGG | - | chr5_4:16976275-16976294 | None:intergenic | 40.0% | |
| ! | CCGATTGGATTTTATGGCAT+TGG | - | chr5_4:16976305-16976324 | None:intergenic | 40.0% |
| ! | TCGATGGCCAGTAGATTTTA+AGG | + | chr5_4:16976369-16976388 | Msa0841050:intron | 40.0% |
| CGGTAGACCTTAAAATCTAC+TGG | - | chr5_4:16976379-16976398 | None:intergenic | 40.0% | |
| GTACAGAAGTAAATGTACGC+AGG | - | chr5_4:16976433-16976452 | None:intergenic | 40.0% | |
| ! | ACATTTTACTGCACAACCAC+TGG | - | chr5_4:16976468-16976487 | None:intergenic | 40.0% |
| AAGCTTGTGTGATACTTCTC+TGG | + | chr5_4:16976494-16976513 | Msa0841050:intron | 40.0% | |
| AGGAGATCGCCATCATAATT+AGG | + | chr5_4:16976641-16976660 | Msa0841050:intron | 40.0% | |
| GGAGATCGCCATCATAATTA+GGG | + | chr5_4:16976642-16976661 | Msa0841050:intron | 40.0% | |
| GAGATCGCCATCATAATTAG+GGG | + | chr5_4:16976643-16976662 | Msa0841050:intron | 40.0% | |
| CAGAAGATGACGTAGTCAAT+TGG | + | chr5_4:16977110-16977129 | Msa0841050:CDS | 40.0% | |
| GACGTAGTCAATTGGTTACA+TGG | + | chr5_4:16977118-16977137 | Msa0841050:CDS | 40.0% | |
| CATAGATGGCGTATGTAATC+AGG | - | chr5_4:16977226-16977245 | None:intergenic | 40.0% | |
| ! | GACTTTGTCGGATCTTTTTG+AGG | - | chr5_4:16977291-16977310 | None:intergenic | 40.0% |
| CAAAAAGATCCGACAAAGTC+TGG | + | chr5_4:16977291-16977310 | Msa0841050:CDS | 40.0% | |
| TGCAGCAACACTTCATACTA+GGG | - | chr5_4:16977357-16977376 | None:intergenic | 40.0% | |
| TCAATTGTCCTGATTGTTGC+TGG | + | chr5_4:16977497-16977516 | Msa0841050:intron | 40.0% | |
| AATCTGTGAACTTCGGTAAG+CGG | - | chr5_4:16977546-16977565 | None:intergenic | 40.0% | |
| ! | CCGAAGTTCACAGATTGTTT+TGG | + | chr5_4:16977550-16977569 | Msa0841050:CDS | 40.0% |
| ! | GAACATTTAGGGTAGCAACA+AGG | - | chr5_4:16977634-16977653 | None:intergenic | 40.0% |
| TTTCAGAGAGAGAGAGAGTG+AGG | - | chr5_4:16972825-16972844 | None:intergenic | 45.0% | |
| !! | TGTTGGTTTGTGATGAGAGG+TGG | - | chr5_4:16972923-16972942 | None:intergenic | 45.0% |
| !! | TGTGTGATGAATGGGTTGCA+TGG | + | chr5_4:16973057-16973076 | Msa0841050:exon | 45.0% |
| TTCTTCAGCTGATACGTTGG+TGG | - | chr5_4:16973124-16973143 | None:intergenic | 45.0% | |
| !! | CATGGCAATGCTGCTGATTT+AGG | + | chr5_4:16973304-16973323 | Msa0841050:CDS | 45.0% |
| TGGTTACTCGAAATCACGGT+GGG | - | chr5_4:16973904-16973923 | None:intergenic | 45.0% | |
| ! | ACCGTGATTTCGAGTAACCA+CGG | + | chr5_4:16973904-16973923 | Msa0841050:intron | 45.0% |
| ACCGTGGTTACTCGAAATCA+CGG | - | chr5_4:16973908-16973927 | None:intergenic | 45.0% | |
| CTATGTCCACATCCATGTAG+GGG | - | chr5_4:16974297-16974316 | None:intergenic | 45.0% | |
| GCTATGTCCACATCCATGTA+GGG | - | chr5_4:16974298-16974317 | None:intergenic | 45.0% | |
| TGCTATGTCCACATCCATGT+AGG | - | chr5_4:16974299-16974318 | None:intergenic | 45.0% | |
| !! | TGTTTGGTTCCGGTTTTTGG+AGG | + | chr5_4:16974447-16974466 | Msa0841050:intron | 45.0% |
| ! | GGAGGAGGCAAAATTGATTC+TGG | + | chr5_4:16974465-16974484 | Msa0841050:intron | 45.0% |
| TCCAGAATAGTCATACCTGC+GGG | - | chr5_4:16975146-16975165 | None:intergenic | 45.0% | |
| CAAAGAAAAGCCTACCTTGC+CGG | - | chr5_4:16975182-16975201 | None:intergenic | 45.0% | |
| !! | ACTTAGTTCTGTCGCAACGA+TGG | + | chr5_4:16975216-16975235 | Msa0841050:intron | 45.0% |
| GCATATGTGCTGGATTCACT+AGG | - | chr5_4:16975373-16975392 | None:intergenic | 45.0% | |
| CTCTATGTCAGCATATGTGC+TGG | - | chr5_4:16975383-16975402 | None:intergenic | 45.0% | |
| CAGCACATATGCTGACATAG+AGG | + | chr5_4:16975381-16975400 | Msa0841050:CDS | 45.0% | |
| AACCAAATATGGAGTTGGCC+AGG | + | chr5_4:16975423-16975442 | Msa0841050:CDS | 45.0% | |
| TTCCTGGCCAACTCCATATT+TGG | - | chr5_4:16975428-16975447 | None:intergenic | 45.0% | |
| ATTTGGCAGCTAAGTTACCG+AGG | + | chr5_4:16975494-16975513 | Msa0841050:CDS | 45.0% | |
| ACGACTAGAGAAAGGACACA+AGG | - | chr5_4:16976225-16976244 | None:intergenic | 45.0% | |
| TGTTGTGCACGACTAGAGAA+AGG | - | chr5_4:16976233-16976252 | None:intergenic | 45.0% | |
| TAGGCCCCACATATAGTGTT+GGG | + | chr5_4:16976773-16976792 | Msa0841050:intron | 45.0% | |
| TGGAGCCCAACACTATATGT+GGG | - | chr5_4:16976781-16976800 | None:intergenic | 45.0% | |
| TGGCAACCGACTATGGAAAA+TGG | + | chr5_4:16977138-16977157 | Msa0841050:CDS | 45.0% | |
| ACCGACTATGGAAAATGGCA+AGG | + | chr5_4:16977143-16977162 | Msa0841050:CDS | 45.0% | |
| !!! | CCCTTGCCATTTTCCATAGT+CGG | - | chr5_4:16977147-16977166 | None:intergenic | 45.0% |
| CCGACTATGGAAAATGGCAA+GGG | + | chr5_4:16977144-16977163 | Msa0841050:CDS | 45.0% | |
| GGGAGTCATATGAACCCTTA+TGG | + | chr5_4:16977164-16977183 | Msa0841050:CDS | 45.0% | |
| GAACCCTTATGGATCAAAGG+AGG | + | chr5_4:16977175-16977194 | Msa0841050:CDS | 45.0% | |
| CATACTAGGGCATGTACATG+TGG | - | chr5_4:16977344-16977363 | None:intergenic | 45.0% | |
| CTGCAGCAACACTTCATACT+AGG | - | chr5_4:16977358-16977377 | None:intergenic | 45.0% | |
| CTAGGTTTCCAGCAACAATC+AGG | - | chr5_4:16977508-16977527 | None:intergenic | 45.0% | |
| ! | TGGTTTGTGATGAGAGGTGG+TGG | - | chr5_4:16972920-16972939 | None:intergenic | 50.0% |
| !! | TGATACGTTGGTGGTGAAGG+TGG | - | chr5_4:16973115-16973134 | None:intergenic | 50.0% |
| !! | AGCTGATACGTTGGTGGTGA+AGG | - | chr5_4:16973118-16973137 | None:intergenic | 50.0% |
| !! | TGATGATGGCAAACTCACGG+TGG | + | chr5_4:16973147-16973166 | Msa0841050:CDS | 50.0% |
| GTGGTTACTCGAAATCACGG+TGG | - | chr5_4:16973905-16973924 | None:intergenic | 50.0% | |
| TTAAGGCTTCTGGCACCAGA+GGG | + | chr5_4:16974027-16974046 | Msa0841050:intron | 50.0% | |
| TGTTTAGGGAAGACACCCTC+TGG | - | chr5_4:16974045-16974064 | None:intergenic | 50.0% | |
| !! | TTGGTTCCGGTTTTTGGAGG+AGG | + | chr5_4:16974450-16974469 | Msa0841050:intron | 50.0% |
| TCCCGCAGGTATGACTATTC+TGG | + | chr5_4:16975142-16975161 | Msa0841050:intron | 50.0% | |
| TCTGGATATGGTGCCTCTAC+CGG | + | chr5_4:16975160-16975179 | Msa0841050:intron | 50.0% | |
| ! | CGGCAAGGTAGGCTTTTCTT+TGG | + | chr5_4:16975180-16975199 | Msa0841050:intron | 50.0% |
| TACGGGCAATCAGTTGGAAG+TGG | + | chr5_4:16975460-16975479 | Msa0841050:CDS | 50.0% | |
| CTACACAGCGGCATTCTTTC+TGG | + | chr5_4:16975532-16975551 | Msa0841050:CDS | 50.0% | |
| GTAAATGTACGCAGGCAGAC+AGG | - | chr5_4:16976425-16976444 | None:intergenic | 50.0% | |
| GTACAACATTGTCGGTCCAG+TGG | + | chr5_4:16976449-16976468 | Msa0841050:intron | 50.0% | |
| !!! | GGTCTCACCGTTTTGGAACT+AGG | + | chr5_4:16976754-16976773 | Msa0841050:intron | 50.0% |
| TGTGGGGCCTAGTTCCAAAA+CGG | - | chr5_4:16976764-16976783 | None:intergenic | 50.0% | |
| CTAGGCCCCACATATAGTGT+TGG | + | chr5_4:16976772-16976791 | Msa0841050:intron | 50.0% | |
| GGAGCCCAACACTATATGTG+GGG | - | chr5_4:16976780-16976799 | None:intergenic | 50.0% | |
| GTGGAGCCCAACACTATATG+TGG | - | chr5_4:16976782-16976801 | None:intergenic | 50.0% | |
| GGTTACATGGCAACCGACTA+TGG | + | chr5_4:16977131-16977150 | Msa0841050:CDS | 50.0% | |
| CCGCCTCCTTTGATCCATAA+GGG | - | chr5_4:16977181-16977200 | None:intergenic | 50.0% | |
| CCCTTATGGATCAAAGGAGG+CGG | + | chr5_4:16977178-16977197 | Msa0841050:CDS | 50.0% | |
| ACCGCCTCCTTTGATCCATA+AGG | - | chr5_4:16977182-16977201 | None:intergenic | 50.0% | |
| ! | CTGCAGCAGCTAGAGCATTT+AGG | - | chr5_4:16977397-16977416 | None:intergenic | 50.0% |
| ! | CTGCAGCAGCTAGAGCATTT+AGG | - | chr5_4:16977397-16977416 | None:intergenic | 50.0% |
| CGGCAACACTTGATACAGCT+AGG | - | chr5_4:16977526-16977545 | None:intergenic | 50.0% | |
| !! | TGAGAGGTGGTGGAGTTGCA+GGG | - | chr5_4:16972910-16972929 | None:intergenic | 55.0% |
| !! | ATGAGAGGTGGTGGAGTTGC+AGG | - | chr5_4:16972911-16972930 | None:intergenic | 55.0% |
| AGGATGAGGAATCGGAGACG+CGG | - | chr5_4:16973179-16973198 | None:intergenic | 55.0% | |
| GTTAAGGCTTCTGGCACCAG+AGG | + | chr5_4:16974026-16974045 | Msa0841050:intron | 55.0% | |
| GTTTATGGGGATGGAGCCCT+TGG | + | chr5_4:16974335-16974354 | Msa0841050:intron | 55.0% | |
| ATATGGTGCCTCTACCGGCA+AGG | + | chr5_4:16975165-16975184 | Msa0841050:intron | 55.0% | |
| AAAGCCTACCTTGCCGGTAG+AGG | - | chr5_4:16975176-16975195 | None:intergenic | 55.0% | |
| GCTAAGTTACCGAGGCTGAG+AGG | + | chr5_4:16975502-16975521 | Msa0841050:CDS | 55.0% | |
| ! | AGAGGCGTGGTTCTACACAG+CGG | + | chr5_4:16975520-16975539 | Msa0841050:CDS | 55.0% |
| ! | GCACATGGGTCTCACCGTTT+TGG | + | chr5_4:16976747-16976766 | Msa0841050:intron | 55.0% |
| ATGAGGAATCGGAGACGCGG+TGG | - | chr5_4:16973176-16973195 | None:intergenic | 60.0% | |
| AGAACCACGCCTCTCAGCCT+CGG | - | chr5_4:16975514-16975533 | None:intergenic | 60.0% | |
| ACGCAGGCAGACAGGAGAGT+TGG | - | chr5_4:16976417-16976436 | None:intergenic | 60.0% | |
| GGTGCCTCTACCGGCAAGGT+AGG | + | chr5_4:16975169-16975188 | Msa0841050:intron | 65.0% | |
| GTTACCGAGGCTGAGAGGCG+TGG | + | chr5_4:16975507-16975526 | Msa0841050:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 16972731 | 16977673 | 16972731 | ID=Msa0841050;Name=Msa0841050 |
| chr5_4 | mRNA | 16972731 | 16977673 | 16972731 | ID=Msa0841050-mRNA-1;Parent=Msa0841050;Name=Msa0841050-mRNA-1;_AED=0.15;_eAED=0.15;_QI=336|0.5|0.4|1|1|1|5|0|327 |
| chr5_4 | exon | 16972731 | 16973383 | 16972731 | ID=Msa0841050-mRNA-1:exon:7292;Parent=Msa0841050-mRNA-1 |
| chr5_4 | exon | 16975375 | 16975606 | 16975375 | ID=Msa0841050-mRNA-1:exon:7293;Parent=Msa0841050-mRNA-1 |
| chr5_4 | exon | 16975988 | 16976035 | 16975988 | ID=Msa0841050-mRNA-1:exon:7294;Parent=Msa0841050-mRNA-1 |
| chr5_4 | exon | 16977106 | 16977346 | 16977106 | ID=Msa0841050-mRNA-1:exon:7295;Parent=Msa0841050-mRNA-1 |
| chr5_4 | exon | 16977528 | 16977673 | 16977528 | ID=Msa0841050-mRNA-1:exon:7296;Parent=Msa0841050-mRNA-1 |
| chr5_4 | five_prime_UTR | 16972731 | 16973066 | 16972731 | ID=Msa0841050-mRNA-1:five_prime_utr;Parent=Msa0841050-mRNA-1 |
| chr5_4 | CDS | 16973067 | 16973383 | 16973067 | ID=Msa0841050-mRNA-1:cds;Parent=Msa0841050-mRNA-1 |
| chr5_4 | CDS | 16975375 | 16975606 | 16975375 | ID=Msa0841050-mRNA-1:cds;Parent=Msa0841050-mRNA-1 |
| chr5_4 | CDS | 16975988 | 16976035 | 16975988 | ID=Msa0841050-mRNA-1:cds;Parent=Msa0841050-mRNA-1 |
| chr5_4 | CDS | 16977106 | 16977346 | 16977106 | ID=Msa0841050-mRNA-1:cds;Parent=Msa0841050-mRNA-1 |
| chr5_4 | CDS | 16977528 | 16977673 | 16977528 | ID=Msa0841050-mRNA-1:cds;Parent=Msa0841050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
