AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0628200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0628200 MtrunA17_Chr4g0004071 91.156 294 20 2 1 288 1 294 0.0 541
Msa0628200 MtrunA17_Chr4g0004071 88.158 152 14 1 293 440 1 152 7.31e-87 270
Msa0628200 MtrunA17_Chr4g0004071 84.884 86 12 1 436 520 229 314 2.09e-44 159
Msa0628200 MtrunA17_Chr4g0004061 83.390 295 42 3 1 288 1 295 7.15e-179 505
Msa0628200 MtrunA17_Chr4g0004061 80.921 152 25 1 293 440 1 152 5.47e-80 252
Msa0628200 MtrunA17_Chr4g0004061 74.157 89 22 1 433 520 227 315 2.64e-39 145
Msa0628200 MtrunA17_Chr7g0256741 38.255 298 172 6 1 288 1 296 1.44e-65 215
Msa0628200 MtrunA17_Chr7g0256741 38.562 153 89 2 293 440 1 153 2.83e-28 115
Msa0628200 MtrunA17_Chr7g0256741 41.573 89 44 4 436 520 232 316 5.55e-14 73.2
Msa0628200 MtrunA17_Chr1g0148781 36.721 305 172 9 1 287 1 302 1.21e-57 194
Msa0628200 MtrunA17_Chr1g0148781 31.847 157 96 4 293 439 1 156 1.16e-20 93.2
Msa0628200 MtrunA17_Chr1g0148781 46.479 71 37 1 433 502 234 304 4.34e-14 73.6
Msa0628200 MtrunA17_Chr3g0138351 35.880 301 176 9 1 287 1 298 9.07e-55 186
Msa0628200 MtrunA17_Chr3g0138351 37.013 154 88 4 293 439 1 152 1.21e-23 101
Msa0628200 MtrunA17_Chr3g0138351 44.595 74 40 1 433 505 230 303 6.41e-14 72.8
Msa0628200 MtrunA17_Chr4g0009561 32.558 301 183 9 4 287 2 299 1.16e-47 167
Msa0628200 MtrunA17_Chr4g0009561 31.293 147 93 4 300 438 6 152 3.63e-15 76.6
Msa0628200 MtrunA17_Chr4g0009561 45.588 68 36 1 436 502 234 301 2.59e-13 70.9
Msa0628200 MtrunA17_Chr4g0009541 33.110 299 185 9 1 287 1 296 1.30e-46 165
Msa0628200 MtrunA17_Chr4g0009541 32.237 152 96 3 293 439 1 150 3.24e-17 82.8
Msa0628200 MtrunA17_Chr4g0009541 42.857 70 39 1 434 502 229 298 4.33e-12 67.4
Msa0628200 MtrunA17_Chr8g0348951 30.741 270 175 4 35 292 29 298 7.37e-36 136
Msa0628200 MtrunA17_Chr7g0247741 30.345 290 187 7 35 310 30 318 1.14e-30 121
Msa0628200 MtrunA17_Chr5g0407781 29.104 268 170 7 32 288 21 279 1.30e-27 112
Msa0628200 MtrunA17_Chr5g0407731 29.197 274 184 6 19 286 36 305 5.39e-26 108
Msa0628200 MtrunA17_Chr8g0345831 26.384 307 196 7 5 294 38 331 1.42e-23 102
Msa0628200 MtrunA17_Chr7g0239101 27.946 297 193 10 3 288 52 338 3.30e-23 101
Msa0628200 MtrunA17_Chr8g0384461 27.007 274 177 9 33 288 70 338 4.70e-23 100
Msa0628200 MtrunA17_Chr8g0370711 31.319 182 118 4 112 287 158 338 1.12e-22 99.4
Msa0628200 MtrunA17_Chr7g0239111 27.667 300 191 10 4 288 50 338 1.30e-22 99.4
Msa0628200 MtrunA17_Chr7g0265221 27.010 311 181 9 8 287 66 361 2.66e-22 99.0
Msa0628200 MtrunA17_Chr1g0184151 26.022 269 179 6 32 286 57 319 5.20e-22 97.4
Msa0628200 MtrunA17_Chr5g0412681 27.431 288 194 6 29 302 43 329 5.43e-22 97.1
Msa0628200 MtrunA17_Chr8g0371931 26.370 292 200 8 8 288 38 325 5.64e-22 97.4
Msa0628200 MtrunA17_Chr4g0064781 29.389 262 167 11 32 279 66 323 5.70e-22 97.4
Msa0628200 MtrunA17_Chr2g0296371 28.571 294 195 7 31 310 71 363 6.58e-22 97.4
Msa0628200 MtrunA17_Chr1g0184121 26.568 271 180 5 31 287 55 320 7.50e-22 97.1
Msa0628200 MtrunA17_Chr5g0412671 28.146 302 188 7 20 300 47 340 8.58e-22 96.7
Msa0628200 MtrunA17_Chr3g0130391 24.497 298 204 6 7 288 67 359 1.82e-21 96.3
Msa0628200 MtrunA17_Chr4g0045411 26.333 300 204 5 3 286 27 325 1.96e-21 95.9
Msa0628200 MtrunA17_Chr1g0184111 26.568 271 180 5 31 287 55 320 2.99e-21 95.1
Msa0628200 MtrunA17_Chr5g0394071 31.176 170 105 5 121 286 2 163 3.55e-21 91.3
Msa0628200 MtrunA17_Chr5g0405411 25.874 286 201 5 13 288 41 325 5.03e-21 94.7
Msa0628200 MtrunA17_Chr3g0128001 26.259 278 194 4 19 286 41 317 5.64e-21 94.4
Msa0628200 MtrunA17_Chr1g0148771 26.255 259 177 6 19 267 66 320 6.57e-21 94.4
Msa0628200 MtrunA17_Chr1g0191201 25.180 278 187 7 33 292 76 350 7.97e-21 94.4
Msa0628200 MtrunA17_Chr2g0332191 25.524 286 194 5 19 289 55 336 8.13e-21 94.4
Msa0628200 MtrunA17_Chr4g0037611 31.875 160 98 4 131 286 1 153 8.75e-21 90.1
Msa0628200 MtrunA17_Chr1g0184161 25.926 270 178 7 32 286 57 319 1.00e-20 93.6
Msa0628200 MtrunA17_Chr7g0233661 34.783 138 83 2 149 286 7 137 1.22e-20 89.0
Msa0628200 MtrunA17_Chr5g0412651 28.041 296 198 7 19 300 46 340 1.28e-20 93.2
Msa0628200 MtrunA17_Chr7g0242551 28.881 277 175 7 27 286 71 342 1.54e-20 93.2
Msa0628200 MtrunA17_Chr8g0351101 26.277 274 184 7 31 288 75 346 3.41e-20 92.4
Msa0628200 MtrunA17_Chr8g0371921 26.022 269 186 6 31 288 59 325 3.53e-20 92.4
Msa0628200 MtrunA17_Chr1g0179801 25.329 304 189 8 8 287 65 354 3.53e-20 92.4
Msa0628200 MtrunA17_Chr5g0424201 25.000 296 195 7 8 287 43 327 5.06e-20 91.3
Msa0628200 MtrunA17_Chr2g0319491 26.389 288 189 8 8 286 32 305 5.13e-20 91.3
Msa0628200 MtrunA17_Chr1g0204181 26.545 275 179 8 33 288 82 352 5.92e-20 91.7
Msa0628200 MtrunA17_Chr8g0370721 28.956 297 193 12 1 284 44 335 6.99e-20 91.3
Msa0628200 MtrunA17_Chr6g0455481 26.866 268 184 6 32 288 58 324 7.58e-20 90.9
Msa0628200 MtrunA17_Chr4g0006371 28.832 274 169 7 32 286 84 350 1.02e-19 90.9
Msa0628200 MtrunA17_Chr7g0239821 28.814 295 186 11 8 288 63 347 1.85e-19 90.1
Msa0628200 MtrunA17_Chr5g0420941 28.428 299 194 10 3 289 39 329 3.35e-19 89.4
Msa0628200 MtrunA17_Chr3g0145171 29.885 174 116 3 112 280 158 330 3.36e-19 89.4
Msa0628200 MtrunA17_Chr7g0239121 26.756 299 196 12 4 288 46 335 3.40e-19 89.4
Msa0628200 MtrunA17_Chr5g0423251 28.358 268 175 7 35 289 68 331 3.52e-19 89.0
Msa0628200 MtrunA17_Chr4g0045441 26.690 281 184 7 28 287 48 327 4.38e-19 89.0
Msa0628200 MtrunA17_Chr6g0474391 30.409 171 114 2 118 288 192 357 5.48e-19 89.0
Msa0628200 MtrunA17_Chr7g0250511 26.190 294 194 7 9 288 49 333 5.67e-19 88.6
Msa0628200 MtrunA17_Chr1g0162361 25.965 285 174 8 31 286 42 318 6.37e-19 88.2
Msa0628200 MtrunA17_Chr1g0162191 28.803 309 201 9 4 298 42 345 6.54e-19 88.6
Msa0628200 MtrunA17_Chr3g0102041 26.937 271 185 7 29 288 57 325 1.00e-18 87.8
Msa0628200 MtrunA17_Chr1g0162351 25.000 284 191 5 27 289 92 374 1.37e-18 87.8
Msa0628200 MtrunA17_Chr5g0421041 27.946 297 196 9 3 288 39 328 1.56e-18 87.0
Msa0628200 MtrunA17_Chr3g0109041 27.979 193 131 3 111 296 151 342 2.33e-18 86.7
Msa0628200 MtrunA17_Chr5g0420721 30.939 181 120 3 112 288 53 232 2.75e-18 84.7
Msa0628200 MtrunA17_Chr8g0375671 29.333 300 194 10 3 288 44 339 2.81e-18 86.7
Msa0628200 MtrunA17_Chr7g0220011 27.675 271 177 7 32 288 55 320 2.90e-18 86.3
Msa0628200 MtrunA17_Chr5g0423191 27.985 268 176 8 35 289 68 331 4.02e-18 85.9
Msa0628200 MtrunA17_Chr3g0125421 24.272 309 207 9 33 321 59 360 5.29e-18 85.9
Msa0628200 MtrunA17_Chr1g0162321 25.000 284 191 6 27 289 92 374 7.55e-18 85.5
Msa0628200 MtrunA17_Chr3g0145181 29.050 179 120 4 112 284 158 335 9.13e-18 84.7
Msa0628200 MtrunA17_Chr3g0113641 25.249 301 189 9 9 286 50 337 9.34e-18 85.1
Msa0628200 MtrunA17_Chr1g0184101 25.407 307 205 6 9 301 38 334 9.86e-18 84.7
Msa0628200 MtrunA17_Chr6g0463821 38.739 111 61 2 120 229 40 144 1.04e-17 80.9
Msa0628200 MtrunA17_Chr8g0384481 24.627 268 187 4 33 286 81 347 1.29e-17 84.7
Msa0628200 MtrunA17_Chr4g0045431 25.676 296 191 8 28 300 48 337 1.33e-17 84.3
Msa0628200 MtrunA17_Chr4g0045471 30.872 149 100 2 161 306 201 349 1.54e-17 84.3
Msa0628200 MtrunA17_Chr2g0289341 24.306 288 204 7 9 288 4 285 1.61e-17 83.6
Msa0628200 MtrunA17_Chr5g0421011 27.723 303 195 10 1 289 39 331 1.89e-17 84.0
Msa0628200 MtrunA17_Chr5g0423201 27.517 298 197 9 3 288 41 331 2.47e-17 83.6
Msa0628200 MtrunA17_Chr5g0420901 27.778 306 183 10 3 287 40 328 2.68e-17 83.6
Msa0628200 MtrunA17_Chr4g0055871 27.640 322 199 13 1 300 1 310 4.21e-17 82.4
Msa0628200 MtrunA17_Chr7g0265351 26.071 280 183 6 25 287 46 318 5.82e-17 82.4
Msa0628200 MtrunA17_Chr5g0420881 37.607 117 71 2 173 288 11 126 6.21e-17 78.2
Msa0628200 MtrunA17_Chr5g0423221 26.846 298 199 7 2 287 64 354 7.12e-17 82.4
Msa0628200 MtrunA17_Chr4g0068891 25.517 290 189 7 19 289 23 304 1.14e-16 81.3
Msa0628200 MtrunA17_Chr3g0105281 27.839 273 156 9 35 286 49 301 2.12e-16 80.5
Msa0628200 MtrunA17_Chr3g0145201 29.050 179 120 4 112 284 793 970 2.22e-16 82.8
Msa0628200 MtrunA17_Chr4g0045451 27.660 282 180 9 28 287 48 327 2.71e-16 80.5
Msa0628200 MtrunA17_Chr8g0375701 27.273 297 199 8 3 288 47 337 4.14e-16 80.1
Msa0628200 MtrunA17_Chr5g0437181 26.374 273 176 7 32 286 71 336 4.66e-16 79.7
Msa0628200 MtrunA17_Chr1g0194321 26.857 175 113 2 112 286 154 313 6.48e-16 79.3
Msa0628200 MtrunA17_Chr7g0239071 27.138 269 175 10 37 288 19 283 6.71e-16 78.6
Msa0628200 MtrunA17_Chr3g0093761 25.436 287 198 7 9 287 56 334 8.53e-16 79.0
Msa0628200 MtrunA17_Chr8g0375681 28.090 267 167 10 35 288 13 267 8.66e-16 78.2
Msa0628200 MtrunA17_Chr8g0375601 26.578 301 198 10 3 288 42 334 1.00e-15 79.0
Msa0628200 MtrunA17_Chr7g0220001 25.993 277 186 7 32 294 57 328 1.16e-15 78.2
Msa0628200 MtrunA17_Chr5g0426891 25.083 303 193 9 6 288 36 324 1.59e-15 78.2
Msa0628200 MtrunA17_Chr5g0420951 28.090 267 175 8 36 289 76 338 2.10e-15 77.8
Msa0628200 MtrunA17_Chr3g0126761 36.607 112 69 2 176 287 104 213 2.36e-15 75.9
Msa0628200 MtrunA17_Chr4g0045461 35.714 112 71 1 176 286 214 325 3.01e-15 77.4
Msa0628200 MtrunA17_Chr5g0420981 26.403 303 196 9 2 288 46 337 3.08e-15 77.4
Msa0628200 MtrunA17_Chr8g0365241 27.757 263 179 7 36 288 80 341 4.50e-15 77.0
Msa0628200 MtrunA17_Chr3g0093741 25.243 309 197 11 9 298 56 349 4.58e-15 76.6
Msa0628200 MtrunA17_Chr2g0311631 25.632 277 170 9 4 257 49 312 4.70e-15 76.6
Msa0628200 MtrunA17_Chr5g0424211 23.810 273 190 6 19 275 45 315 5.43e-15 76.3
Msa0628200 MtrunA17_Chr8g0375571 28.041 296 183 11 3 279 39 323 6.59e-15 76.3
Msa0628200 MtrunA17_Chr5g0423211 26.384 307 188 12 3 287 41 331 6.85e-15 76.3
Msa0628200 MtrunA17_Chr2g0314401 26.022 269 186 6 31 288 70 336 7.29e-15 76.3
Msa0628200 MtrunA17_Chr3g0092531 24.895 237 161 5 33 259 30 259 1.08e-14 75.1
Msa0628200 MtrunA17_Chr2g0293931 35.088 114 73 1 176 288 74 187 1.43e-14 72.8
Msa0628200 MtrunA17_Chr5g0439011 23.952 334 202 11 9 322 5 306 1.52e-14 74.7
Msa0628200 MtrunA17_Chr4g0052251 25.271 277 186 8 29 286 39 313 2.20e-14 74.3
Msa0628200 MtrunA17_Chr5g0421101 27.027 296 198 9 3 287 41 329 2.54e-14 74.3
Msa0628200 MtrunA17_Chr3g0093751 24.460 278 190 6 25 287 63 335 3.24e-14 74.3
Msa0628200 MtrunA17_Chr3g0125201 24.436 266 170 7 9 257 3 254 4.09e-14 73.2
Msa0628200 MtrunA17_Chr5g0398291 24.013 304 198 8 7 287 45 338 4.65e-14 73.6
Msa0628200 MtrunA17_Chr3g0126741 25.497 302 200 8 1 287 51 342 4.75e-14 73.9
Msa0628200 MtrunA17_Chr6g0486831 28.495 186 119 5 114 287 138 321 5.10e-14 73.6
Msa0628200 MtrunA17_Chr3g0121141 23.313 326 210 11 9 322 4 301 6.34e-14 72.8
Msa0628200 MtrunA17_Chr4g0075471 33.871 124 77 3 153 272 16 138 7.29e-14 69.7
Msa0628200 MtrunA17_Chr4g0050031 27.638 199 134 5 114 303 169 366 8.31e-14 73.2
Msa0628200 MtrunA17_Chr2g0314381 26.374 273 186 7 27 288 94 362 8.44e-14 73.2
Msa0628200 MtrunA17_Chr5g0407591 38.144 97 56 3 207 300 7 102 1.34e-13 67.4
Msa0628200 MtrunA17_Chr5g0407591 45.070 71 33 3 434 499 17 86 1.92e-11 61.2
Msa0628200 MtrunA17_Chr3g0114861 25.556 180 128 3 112 286 143 321 1.62e-13 71.6
Msa0628200 MtrunA17_Chr3g0092581 31.532 111 75 1 149 259 22 131 2.07e-13 68.9
Msa0628200 MtrunA17_Chr5g0421091 26.263 297 200 9 3 287 39 328 2.19e-13 71.6
Msa0628200 MtrunA17_Chr7g0232161 27.600 250 160 9 7 245 61 300 2.76e-13 70.9
Msa0628200 MtrunA17_Chr8g0358941 32.174 115 78 0 176 290 203 317 3.37e-13 70.9
Msa0628200 MtrunA17_Chr7g0239091 24.483 290 193 9 9 288 160 433 6.23e-13 70.9
Msa0628200 MtrunA17_Chr1g0158011 26.984 189 130 5 120 300 69 257 9.44e-13 68.6
Msa0628200 MtrunA17_Chr4g0064771 29.032 186 121 7 102 279 6 188 1.05e-12 67.4
Msa0628200 MtrunA17_Chr4g0053251 23.938 259 174 6 21 258 26 282 1.88e-12 68.6
Msa0628200 MtrunA17_Chr2g0314391 25.455 275 176 8 31 286 89 353 1.99e-12 68.9
Msa0628200 MtrunA17_Chr2g0285931 31.356 118 79 2 176 292 203 319 2.86e-12 68.2
Msa0628200 MtrunA17_Chr3g0087031 24.324 296 206 9 3 287 54 342 4.02e-12 67.8
Msa0628200 MtrunA17_Chr2g0313111 23.929 280 179 9 29 286 38 305 8.37e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0628200 AT1G52820.1 58.974 312 116 4 1 300 1 312 3.51e-127 374
Msa0628200 AT1G52820.1 55.152 165 65 3 293 448 1 165 1.37e-52 181
Msa0628200 AT1G52820.1 60.674 89 34 1 433 520 229 317 1.15e-30 122
Msa0628200 AT4G03070.1 52.901 293 121 5 8 287 13 301 3.44e-101 308
Msa0628200 AT4G03070.1 49.315 146 65 3 299 439 12 153 1.06e-38 144
Msa0628200 AT4G03070.1 58.537 82 34 0 433 514 234 315 6.64e-26 108
Msa0628200 AT1G52820.2 58.475 236 89 3 1 227 1 236 1.37e-92 283
Msa0628200 AT1G52820.2 55.152 165 65 3 293 448 1 165 3.61e-53 181
Msa0628200 AT1G28030.1 48.148 297 142 7 3 288 7 302 8.81e-84 263
Msa0628200 AT1G28030.1 48.993 149 71 2 295 439 7 154 6.74e-36 136
Msa0628200 AT1G28030.1 46.154 91 44 2 433 520 234 322 2.38e-17 83.6
Msa0628200 AT1G52790.1 43.464 306 160 6 6 300 2 305 1.35e-81 257
Msa0628200 AT1G52790.1 41.958 143 78 2 300 437 4 146 1.47e-32 127
Msa0628200 AT1G52790.1 40.000 85 48 2 436 519 227 309 2.02e-15 77.8
Msa0628200 AT1G52800.1 41.311 305 167 5 6 300 7 309 6.05e-74 237
Msa0628200 AT1G52800.1 40.411 146 82 2 300 440 9 154 2.75e-31 123
Msa0628200 AT1G52800.1 43.902 82 43 2 440 520 235 314 3.77e-16 79.7
Msa0628200 AT1G52810.1 42.414 290 127 6 8 288 11 269 1.14e-66 217
Msa0628200 AT1G52810.1 40.780 282 105 4 299 520 10 289 6.57e-62 205
Msa0628200 AT1G80320.1 36.120 299 176 5 1 288 1 295 7.52e-59 198
Msa0628200 AT1G80320.1 30.822 146 92 3 301 439 9 152 1.62e-15 78.2
Msa0628200 AT1G80320.1 39.362 94 49 3 433 520 227 318 4.79e-14 73.6
Msa0628200 AT1G15540.1 35.065 308 179 7 1 293 1 302 3.95e-53 182
Msa0628200 AT1G15540.1 29.936 157 94 4 293 437 1 153 9.48e-19 87.8
Msa0628200 AT1G15540.1 41.573 89 45 4 436 520 234 319 2.50e-12 68.6
Msa0628200 AT1G15540.4 35.065 308 179 7 1 293 1 302 3.95e-53 182
Msa0628200 AT1G15540.4 29.936 157 94 4 293 437 1 153 9.48e-19 87.8
Msa0628200 AT1G15540.4 41.573 89 45 4 436 520 234 319 2.50e-12 68.6
Msa0628200 AT1G15540.2 35.065 308 179 7 1 293 4 305 4.51e-53 182
Msa0628200 AT1G15540.2 29.936 157 94 4 293 437 4 156 1.13e-18 87.4
Msa0628200 AT1G15540.2 41.573 89 45 4 436 520 237 322 2.36e-12 68.6
Msa0628200 AT1G15540.3 35.065 308 179 7 1 293 8 309 4.72e-53 182
Msa0628200 AT1G15540.3 29.936 157 94 4 293 437 8 160 1.14e-18 87.8
Msa0628200 AT1G15540.3 41.573 89 45 4 436 520 241 326 2.33e-12 68.6
Msa0628200 AT4G03050.2 42.857 189 98 4 1 183 1 185 6.30e-41 152
Msa0628200 AT4G03050.2 50.000 116 57 1 173 287 271 386 5.20e-34 133
Msa0628200 AT4G03050.2 40.123 162 88 3 300 455 7 165 1.22e-29 120
Msa0628200 AT4G03050.2 49.425 87 42 2 436 520 321 407 2.26e-20 94.0
Msa0628200 AT4G03050.1 42.857 189 98 4 1 183 1 185 6.30e-41 152
Msa0628200 AT4G03050.1 50.000 116 57 1 173 287 271 386 5.20e-34 133
Msa0628200 AT4G03050.1 40.123 162 88 3 300 455 7 165 1.22e-29 120
Msa0628200 AT4G03050.1 49.425 87 42 2 436 520 321 407 2.26e-20 94.0
Msa0628200 AT4G23340.1 28.990 307 203 6 19 311 13 318 9.47e-32 125
Msa0628200 AT2G36690.2 27.759 299 185 8 8 288 60 345 9.33e-24 103
Msa0628200 AT2G36690.1 27.759 299 185 8 8 288 60 345 9.33e-24 103
Msa0628200 AT3G51240.1 27.055 292 198 8 8 288 37 324 1.07e-22 100
Msa0628200 AT5G51310.1 26.780 295 195 6 19 292 8 302 1.17e-22 99.4
Msa0628200 AT4G23340.2 30.500 200 127 3 124 311 1 200 2.03e-22 95.9
Msa0628200 AT4G21690.1 26.277 274 178 8 35 287 63 333 2.59e-22 98.6
Msa0628200 AT1G15550.1 26.545 275 187 4 29 289 67 340 6.62e-22 97.8
Msa0628200 AT1G50960.1 27.532 316 192 7 8 306 39 334 6.85e-22 97.4
Msa0628200 AT1G78550.1 27.757 263 177 7 36 287 77 337 2.09e-21 96.3
Msa0628200 AT4G21200.1 27.931 290 181 11 8 286 41 313 2.47e-21 95.5
Msa0628200 AT3G21420.1 28.839 267 177 7 32 286 77 342 2.80e-21 95.9
Msa0628200 AT1G78550.2 29.536 237 154 7 62 287 25 259 5.98e-21 93.2
Msa0628200 AT1G14130.1 26.568 271 191 4 19 283 12 280 1.07e-20 93.2
Msa0628200 AT1G14120.2 28.758 306 195 7 19 305 11 312 1.55e-20 92.8
Msa0628200 AT1G14120.1 28.758 306 195 7 19 305 11 312 1.55e-20 92.8
Msa0628200 AT1G14120.3 28.758 306 195 7 19 305 11 312 1.55e-20 92.8
Msa0628200 AT5G51810.1 24.638 276 183 5 33 288 81 351 1.65e-20 94.0
Msa0628200 AT3G19010.1 25.352 284 181 8 29 286 45 323 1.18e-19 90.9
Msa0628200 AT3G19010.4 25.352 284 181 8 29 286 45 323 1.18e-19 90.9
Msa0628200 AT1G80330.1 26.389 288 190 8 19 288 52 335 1.75e-19 90.5
Msa0628200 AT5G05600.1 28.125 288 189 9 27 298 79 364 2.91e-19 90.1
Msa0628200 AT3G51240.2 28.814 236 155 6 64 288 7 240 3.15e-19 88.2
Msa0628200 AT4G25420.1 24.916 297 202 7 9 288 61 353 3.65e-19 89.7
Msa0628200 AT3G55970.1 27.063 303 175 11 15 289 63 347 5.07e-19 89.4
Msa0628200 AT5G24530.1 25.574 305 195 8 19 300 41 336 6.24e-19 88.6
Msa0628200 AT5G07200.1 29.651 172 117 2 103 271 165 335 1.97e-18 87.8
Msa0628200 AT5G08640.2 23.841 302 193 8 6 286 40 325 1.38e-17 84.3
Msa0628200 AT5G08640.1 23.841 302 193 8 6 286 40 325 1.38e-17 84.3
Msa0628200 AT4G16330.1 26.738 187 129 3 113 296 67 248 1.58e-17 82.8
Msa0628200 AT3G11180.2 26.923 286 188 6 17 286 98 378 2.83e-17 84.3
Msa0628200 AT3G11180.1 27.575 301 194 8 17 298 98 393 3.60e-17 84.0
Msa0628200 AT4G25310.1 29.213 267 166 9 36 287 76 334 8.87e-17 82.4
Msa0628200 AT5G63600.2 23.792 269 186 6 32 287 49 311 1.45e-16 81.3
Msa0628200 AT4G16330.2 26.738 187 129 3 113 296 173 354 1.48e-16 81.6
Msa0628200 AT1G80340.1 25.828 302 199 6 2 289 43 333 1.83e-16 81.3
Msa0628200 AT5G20400.1 24.828 290 188 7 9 279 45 323 1.93e-16 81.3
Msa0628200 AT3G13610.1 25.413 303 194 8 3 288 56 343 2.06e-16 81.3
Msa0628200 AT5G63600.1 23.507 268 187 5 32 287 49 310 3.12e-16 80.5
Msa0628200 AT5G43935.1 22.945 292 191 9 6 287 16 283 3.12e-16 79.7
Msa0628200 AT4G10490.1 29.670 182 120 4 113 288 148 327 3.68e-16 80.5
Msa0628200 AT2G38240.1 28.261 276 166 9 33 286 66 331 4.93e-16 80.1
Msa0628200 AT3G19010.3 23.827 277 164 8 29 286 45 293 6.59e-16 79.3
Msa0628200 AT5G20550.1 27.174 276 175 11 31 287 65 333 7.25e-16 79.7
Msa0628200 AT3G19000.1 24.567 289 179 8 29 287 50 329 1.34e-15 79.0
Msa0628200 AT2G34555.1 23.929 280 182 6 29 286 37 307 1.50e-15 78.6
Msa0628200 AT1G60980.1 28.125 192 131 3 100 288 163 350 1.57e-15 79.0
Msa0628200 AT4G25300.1 24.830 294 200 7 8 287 51 337 2.53e-15 77.8
Msa0628200 AT2G44800.1 24.762 315 180 8 3 287 48 335 3.55e-15 77.4
Msa0628200 AT1G30040.1 24.364 275 188 6 29 286 41 312 3.80e-15 77.4
Msa0628200 AT4G22880.1 23.762 303 208 8 4 288 42 339 3.96e-15 77.4
Msa0628200 AT4G22880.2 23.762 303 208 8 4 288 42 339 3.96e-15 77.4
Msa0628200 AT4G22880.3 23.762 303 208 8 4 288 42 339 3.96e-15 77.4
Msa0628200 AT5G63590.1 24.828 290 187 10 19 286 17 297 4.88e-15 76.6
Msa0628200 AT5G54000.2 25.556 270 181 6 31 285 66 330 5.28e-15 77.0
Msa0628200 AT5G54000.1 26.616 263 165 7 38 285 1 250 6.02e-15 75.5
Msa0628200 AT5G63595.1 22.822 241 172 3 19 257 28 256 1.37e-14 74.7
Msa0628200 AT1G55290.1 25.000 284 191 7 18 288 69 343 3.44e-14 74.7
Msa0628200 AT1G78440.1 27.624 181 111 2 126 286 122 302 4.04e-14 73.9
Msa0628200 AT1G77330.1 24.823 282 182 7 9 273 3 271 6.71e-14 73.2
Msa0628200 AT3G60290.1 26.692 266 175 8 36 287 76 335 8.27e-14 73.6
Msa0628200 AT5G43440.1 27.168 173 115 6 122 286 176 345 1.04e-13 73.2
Msa0628200 AT4G10500.1 23.649 296 195 8 9 286 44 326 1.09e-13 72.8
Msa0628200 AT4G25300.2 29.143 175 112 4 120 286 72 242 1.10e-13 71.6
Msa0628200 AT1G44090.1 28.649 185 124 5 118 298 189 369 1.18e-13 73.2
Msa0628200 AT1G12010.1 23.193 332 214 11 4 323 2 304 1.42e-13 72.4
Msa0628200 AT1G49390.2 28.902 173 117 3 112 279 73 244 3.21e-13 70.5
Msa0628200 AT1G49390.1 25.869 259 162 7 37 279 79 323 7.34e-13 70.5
Msa0628200 AT1G17020.1 26.316 266 177 9 36 286 77 338 1.11e-12 70.1
Msa0628200 AT1G47990.1 31.034 116 79 1 174 288 186 301 1.47e-12 69.3
Msa0628200 AT1G62380.1 24.476 286 191 11 4 275 2 276 1.53e-12 68.9
Msa0628200 AT1G02400.1 31.034 116 79 1 175 289 197 312 1.65e-12 68.9
Msa0628200 AT5G07480.2 25.946 185 127 4 112 287 42 225 2.05e-12 67.8
Msa0628200 AT3G61400.1 27.604 192 129 6 122 303 179 370 2.53e-12 68.9
Msa0628200 AT3G50210.4 23.602 322 196 11 9 287 8 322 2.56e-12 68.6
Msa0628200 AT3G50210.1 23.602 322 196 11 9 287 8 322 2.56e-12 68.6
Msa0628200 AT3G50210.3 23.602 322 196 11 9 287 8 322 2.56e-12 68.6
Msa0628200 AT1G05010.1 31.646 158 98 6 118 270 115 267 3.73e-12 68.2
Msa0628200 AT5G07480.1 25.946 185 127 4 112 287 151 334 4.20e-12 68.2
Msa0628200 AT5G58660.1 32.117 137 85 4 134 265 180 313 5.32e-12 67.8
Msa0628200 AT1G17010.1 25.912 274 186 8 29 287 68 339 7.58e-12 67.4
Msa0628200 AT1G04380.1 31.933 119 77 3 173 288 210 327 1.09e-11 66.6

Find 160 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAACCTTCCACTTGATTT+TGG 0.165013 4_3:-8804476 None:intergenic
CTCCTCGGAGAAGGAATTTA+TGG 0.165333 4_3:-8808877 None:intergenic
AATTATTAGGAAGATGATTT+TGG 0.182671 4_3:+8804305 Msa0628200:CDS
ACACATCATATATATATTTA+TGG 0.191669 4_3:-8809824 None:intergenic
TTTATAATGTACCCTTCTTT+GGG 0.224285 4_3:-8809497 None:intergenic
CATAACCCTGAGACGGTAAT+TGG 0.234620 4_3:-8804373 None:intergenic
GGGAAGGACCGGTGAAAATA+TGG 0.251843 4_3:+8808133 Msa0628200:intron
GCTTATCCATTGTTCATCTT+TGG 0.262260 4_3:-8804508 None:intergenic
TTGAGTTGGATCAAATTATT+AGG 0.271655 4_3:+8804292 Msa0628200:CDS
TAACTCCCAATTGGGACTTT+TGG 0.274880 4_3:-8803592 None:intergenic
TCCATCCGGCCACAAGATAT+TGG 0.294565 4_3:-8803868 None:intergenic
TCCATCCGGCCACAAGATAT+TGG 0.294565 4_3:-8808489 None:intergenic
TAACTCCCAATTGGGACTTT+TGG 0.307103 4_3:-8808213 None:intergenic
CTCTTCTAGTGAAGTAAATA+TGG 0.310135 4_3:-8808321 None:intergenic
TATATGTTGTTTGCATTCAT+TGG 0.322888 4_3:+8809895 Msa0628200:three_prime_UTR
AAGCCTTATGATGGCTATAT+TGG 0.334407 4_3:+8803768 Msa0628200:intron
AGGTTATTGAAGTCAATTAT+TGG 0.351381 4_3:-8808179 None:intergenic
AGTGAAGTCCCAAGTCTATA+AGG 0.368829 4_3:+8808235 Msa0628200:CDS
AAGCCTTATGATGGCTATCT+TGG 0.371205 4_3:+8808389 Msa0628200:intron
AAGACAATTAGTGGAAGCTT+TGG 0.371289 4_3:-8803549 None:intergenic
CTCATCATCACCCGGTGAAA+TGG 0.378285 4_3:-8809434 None:intergenic
CTCATCATCACCCGGTGAAA+TGG 0.379842 4_3:-8804816 None:intergenic
AATTACACCGGTGTTACGTC+TGG 0.386685 4_3:+8809674 Msa0628200:three_prime_UTR
GGACTTCACTAACTCCCAAT+TGG 0.386844 4_3:-8803601 None:intergenic
GGACTTCACTAACTCCCAAT+TGG 0.386844 4_3:-8808222 None:intergenic
TTTATAATGTACCCTCCATT+GGG 0.397954 4_3:-8804879 None:intergenic
TACAAGGCATTAGTAGAGTA+TGG 0.398278 4_3:+8803630 Msa0628200:CDS
GGCTGCATTCGCCATTTCAC+CGG 0.398369 4_3:+8804805 Msa0628200:CDS
GGCTGCATTCGCCATTTCAC+CGG 0.398369 4_3:+8809423 Msa0628200:CDS
TATAAGGCATTAGCAGAGTA+TGG 0.406334 4_3:+8808251 Msa0628200:CDS
CTATAGCTTATGTTATTAAG+AGG 0.409102 4_3:+8809796 Msa0628200:three_prime_UTR
TCCTCATCCACCAGCTCCTC+CGG 0.417316 4_3:-8809524 None:intergenic
TTAAGTAGCTTAGTCTCTAA+AGG 0.419629 4_3:-8803735 None:intergenic
CTCCTCAGAGAAGGAATGTA+TGG 0.419991 4_3:-8804265 None:intergenic
CTACTAATGCCTTGTAGACT+TGG 0.421084 4_3:-8803623 None:intergenic
TGGAAGCCAAAAGTCCCAAT+TGG 0.421664 4_3:+8808207 Msa0628200:CDS
CAAAAGGCTTAAAGAGTAAA+GGG 0.424456 4_3:-8804932 None:intergenic
ACTCAACCAATTACCGTCTC+AGG 0.434283 4_3:+8804367 Msa0628200:CDS
CTGCTAATGCCTTATAGACT+TGG 0.437929 4_3:-8808244 None:intergenic
AGGTTATTGAAGACAATTAG+TGG 0.438262 4_3:-8803558 None:intergenic
TGGATGCCAAAAGTCCCAAT+TGG 0.438994 4_3:+8803586 Msa0628200:CDS
TCCCGTGGAGCTGGTGGATG+AGG 0.442692 4_3:+8804905 Msa0628200:CDS
TCCGGAGGAGCTGGTGGATG+AGG 0.453378 4_3:+8809523 Msa0628200:CDS
TTGAGTAGCTTAGTCTCTAA+AGG 0.454248 4_3:-8808356 None:intergenic
TCAAAAGGCTTAAAGAGTAA+AGG 0.456074 4_3:-8804933 None:intergenic
ACTACAAAACTTTCTGAAGA+AGG 0.456597 4_3:-8804537 None:intergenic
CTCCTCATCCACCAGCTCCA+CGG 0.458278 4_3:-8804907 None:intergenic
TCCTCATCCACCAGCTCCAC+GGG 0.464984 4_3:-8804906 None:intergenic
CTCTCATAAAGTGGAACTAC+AGG 0.468829 4_3:-8808419 None:intergenic
CTCTGAGGAGCTAATTGAGT+TGG 0.471934 4_3:+8804278 Msa0628200:CDS
TATAAAAGCTCCGGAGGAGC+TGG 0.478262 4_3:+8809514 Msa0628200:CDS
CTCAATTAGCTCCTCGGAGA+AGG 0.480469 4_3:-8808886 None:intergenic
TATAAAAGCTCCCGTGGAGC+TGG 0.481011 4_3:+8804896 Msa0628200:CDS
GACTTCACTAACTCCCAATT+GGG 0.486736 4_3:-8803600 None:intergenic
GACTTCACTAACTCCCAATT+GGG 0.486736 4_3:-8808221 None:intergenic
TAAGTAGCTTAGTCTCTAAA+GGG 0.493999 4_3:-8803734 None:intergenic
TGAGTAGCTTAGTCTCTAAA+GGG 0.493999 4_3:-8808355 None:intergenic
ACCAATATCTTGTGGCCGGA+TGG 0.495704 4_3:+8803867 Msa0628200:CDS
ACCAATATCTTGTGGCCGGA+TGG 0.495704 4_3:+8808488 Msa0628200:CDS
CTCCGAGGAGCTAATTGAGT+TGG 0.496308 4_3:+8808890 Msa0628200:CDS
AGGAACTCAGCATAATCAAA+AGG 0.497152 4_3:-8804948 None:intergenic
AGGAACTCAGCATAATCAAA+AGG 0.497152 4_3:-8809566 None:intergenic
ATCCAACTCAATTAGCTCCT+CGG 0.499257 4_3:-8808892 None:intergenic
TGACCAAGATAGCCATCATA+AGG 0.499656 4_3:-8808392 None:intergenic
ATAGCTCAAACCCATCCCTT+TGG 0.499909 4_3:-8809777 None:intergenic
TGGCTATATTGGTCAATATC+CGG 0.500153 4_3:+8803779 Msa0628200:CDS
ATGGCTTTGCGAAGGTGTAA+AGG 0.500853 4_3:-8808302 None:intergenic
AATTATTGGAAGCTTTAGAA+TGG 0.504433 4_3:-8808165 None:intergenic
GTGTCTAATAAGCCTTATGA+TGG 0.509211 4_3:+8803759 Msa0628200:intron
GTGTCTAATAAGCCTTATGA+TGG 0.509211 4_3:+8808380 Msa0628200:intron
CGGTCTGTGCGCACTTATTG+TGG 0.509968 4_3:+8809623 Msa0628200:CDS
ATGTCTTTACGAAGGTCTAA+AGG 0.510202 4_3:-8803681 None:intergenic
GGAAGCCAAAAGTCCCAATT+GGG 0.510341 4_3:+8808208 Msa0628200:CDS
CTACTCTCATGAAGGCCAAA+GGG 0.512486 4_3:+8809762 Msa0628200:three_prime_UTR
TGTCTTCAATAACCTCAACT+TGG 0.513211 4_3:+8803566 Msa0628200:CDS
TGACCAATATAGCCATCATA+AGG 0.516797 4_3:-8803771 None:intergenic
TGACTTCAATAACCTCAACT+TGG 0.518399 4_3:+8808187 Msa0628200:CDS
AGGGTACATTATAAAAGCTC+CGG 0.518778 4_3:+8809505 Msa0628200:CDS
TAAGATATTTGCATCCTCAA+TGG 0.520151 4_3:-8803826 None:intergenic
GGATGCCAAAAGTCCCAATT+GGG 0.520983 4_3:+8803587 Msa0628200:CDS
TTTCACGCTCGAGAAGGCGT+GGG 0.522167 4_3:+8809596 Msa0628200:CDS
TTTAGGTGTTGAAAAGTACA+TGG 0.523921 4_3:+8804332 Msa0628200:intron
CTCAATTAGCTCCTCAGAGA+AGG 0.525827 4_3:-8804274 None:intergenic
GCTGCATTCGCCATTTCACC+GGG 0.528558 4_3:+8804806 Msa0628200:CDS
GCTGCATTCGCCATTTCACC+GGG 0.528558 4_3:+8809424 Msa0628200:CDS
GGAAGGACCGGTGAAAATAT+GGG 0.532015 4_3:+8808134 Msa0628200:intron
ATGGCCATGCTCTCATAAAG+TGG 0.532560 4_3:-8803807 None:intergenic
TTCACGCTCGAGAAGGCGTG+GGG 0.534148 4_3:+8809597 Msa0628200:CDS
AATGAGGCAAGGTATTCAGC+AGG 0.534999 4_3:+8804843 Msa0628200:CDS
AATGAGGCAAGGTATTCAGC+AGG 0.534999 4_3:+8809461 Msa0628200:CDS
AAAAGCTCCCGTGGAGCTGG+TGG 0.535296 4_3:+8804899 Msa0628200:CDS
ATGGCCATCCTCTCATAAAG+TGG 0.539466 4_3:-8808428 None:intergenic
CTCATGAAGGCCAAAGGGAT+GGG 0.539788 4_3:+8809767 Msa0628200:three_prime_UTR
TCTCATGAAGGCCAAAGGGA+TGG 0.541383 4_3:+8809766 Msa0628200:three_prime_UTR
CTCTCATAAAGTGGAACCAC+CGG 0.543310 4_3:-8803798 None:intergenic
TTATAATGTACCCTTCTTTG+GGG 0.548996 4_3:-8809496 None:intergenic
CAAACAAGTGACACAAAACT+AGG 0.550916 4_3:+8804411 Msa0628200:CDS
AAAAGCTCCGGAGGAGCTGG+TGG 0.554268 4_3:+8809517 Msa0628200:CDS
TTGTACCAAAATCAAGTGGA+AGG 0.554694 4_3:+8804471 Msa0628200:CDS
ACAAAGTTCTTGTCCGTGTG+TGG 0.562542 4_3:-8804441 None:intergenic
CATGACCAATATCTTGTGGC+CGG 0.564885 4_3:+8803863 Msa0628200:CDS
CATGACCAATATCTTGTGGC+CGG 0.564885 4_3:+8808484 Msa0628200:CDS
AGTGAAGTCCCAAGTCTACA+AGG 0.568762 4_3:+8803614 Msa0628200:CDS
TACTAATGCCTTGTAGACTT+GGG 0.570489 4_3:-8803622 None:intergenic
TGCTAATGCCTTATAGACTT+GGG 0.570558 4_3:-8808243 None:intergenic
TATAGCTTATGTTATTAAGA+GGG 0.570560 4_3:+8809797 Msa0628200:three_prime_UTR
TTATGAGAGCATGGCCATTG+AGG 0.570943 4_3:+8803812 Msa0628200:CDS
GGTGATGATGAGTCGGAATG+AGG 0.577416 4_3:+8804827 Msa0628200:CDS
GGTTCCACTTTATGAGAGCA+TGG 0.579516 4_3:+8803803 Msa0628200:CDS
CTGTAGTTCCACTTTATGAG+AGG 0.580451 4_3:+8808420 Msa0628200:CDS
AGTTCCACTTTATGAGAGGA+TGG 0.582196 4_3:+8808424 Msa0628200:CDS
CATATTGTACCAAAATCAAG+TGG 0.585592 4_3:+8804467 Msa0628200:CDS
AAGTATTACTACTCTCATGA+AGG 0.588140 4_3:+8809754 Msa0628200:three_prime_UTR
TTTCACCGGGTGATGATGAG+TGG 0.590400 4_3:+8809437 Msa0628200:CDS
CATTCCCACTCATCATCACC+CGG 0.593548 4_3:-8809442 None:intergenic
TATAATGTACCCTTCTTTGG+GGG 0.599958 4_3:-8809495 None:intergenic
TGTAATTTGAGAAGTAAATG+TGG 0.600791 4_3:-8809658 None:intergenic
CTCGAGCGTGAAAATACTTG+AGG 0.604032 4_3:-8809586 None:intergenic
TGCAGGCATGGTCAAACGGG+AGG 0.605635 4_3:+8809402 Msa0628200:intron
TGATGACCAAAGATGAACAA+TGG 0.605988 4_3:+8804502 Msa0628200:CDS
ACTACTCTCATGAAGGCCAA+AGG 0.608150 4_3:+8809761 Msa0628200:three_prime_UTR
TTCACCGGGTGATGATGAGT+CGG 0.609819 4_3:+8804820 Msa0628200:CDS
TTCACCGGGTGATGATGAGT+GGG 0.609819 4_3:+8809438 Msa0628200:CDS
CAACACAATACTTCTTACAA+AGG 0.611240 4_3:-8809924 None:intergenic
TTGTTCTCTAACCCCAATGG+AGG 0.612012 4_3:+8804867 Msa0628200:CDS
ATTTACTTCTCAAATTACAC+CGG 0.612419 4_3:+8809662 Msa0628200:three_prime_UTR
TAAGATATTTGCATCCTCGA+TGG 0.613439 4_3:-8808447 None:intergenic
CTCAACCAATTACCGTCTCA+GGG 0.615222 4_3:+8804368 Msa0628200:CDS
GGTGATGATGAGTGGGAATG+AGG 0.615235 4_3:+8809445 Msa0628200:CDS
GGGTTGTTCTCTAACCCCAA+TGG 0.618714 4_3:+8804864 Msa0628200:CDS
TGTACTTCATAACCCTGAGA+CGG 0.619668 4_3:-8804380 None:intergenic
ATTACACCGGTGTTACGTCT+GGG 0.619845 4_3:+8809675 Msa0628200:three_prime_UTR
CATTCCGACTCATCATCACC+CGG 0.626520 4_3:-8804824 None:intergenic
CATGAGAGTAGTAATACTTG+AGG 0.629628 4_3:-8809750 None:intergenic
AAAGCATGACCAATATCTTG+TGG 0.630527 4_3:+8803859 Msa0628200:CDS
AAAGCATGACCAATATCTTG+TGG 0.630527 4_3:+8808480 Msa0628200:CDS
TGTAGGCATGGTCAAACGGG+AGG 0.633699 4_3:+8804784 Msa0628200:intron
CTCAGGGTTATGAAGTACAA+AGG 0.637097 4_3:+8804384 Msa0628200:CDS
AAGCAAATATGTCTTTACGA+AGG 0.638765 4_3:-8803689 None:intergenic
GTACATTATAAAAGCTCCCG+TGG 0.641395 4_3:+8804890 Msa0628200:CDS
ACTAGGCCTCAGTCCACACA+CGG 0.644053 4_3:+8804428 Msa0628200:CDS
AATTAGTGGAAGCTTTGGAG+TGG 0.646700 4_3:-8803544 None:intergenic
TTATAATGTACCCTCCATTG+GGG 0.646898 4_3:-8804878 None:intergenic
TGATGAGTCGGAATGAGGCA+AGG 0.647318 4_3:+8804832 Msa0628200:CDS
TCTTGTCCGTGTGTGGACTG+AGG 0.654196 4_3:-8804434 None:intergenic
TGATGAGTGGGAATGAGGCA+AGG 0.659052 4_3:+8809450 Msa0628200:CDS
AAGTAAATATGGCTTTGCGA+AGG 0.659208 4_3:-8808310 None:intergenic
ACACTACCCAGACGTAACAC+CGG 0.666494 4_3:-8809681 None:intergenic
TGTTCTCTAACCCCAATGGA+GGG 0.668675 4_3:+8804868 Msa0628200:CDS
GTACATTATAAAAGCTCCGG+AGG 0.668840 4_3:+8809508 Msa0628200:CDS
ATGAGGCAAGGTATTCAGCA+GGG 0.672754 4_3:+8804844 Msa0628200:CDS
AACCATACATTCCTTCTCTG+AGG 0.672793 4_3:+8804263 Msa0628200:CDS
CTATATTGGTCAATATCCGG+TGG 0.672985 4_3:+8803782 Msa0628200:CDS
GTAGCTTAGTCTCTAAAGGG+AGG 0.679630 4_3:-8803731 None:intergenic
ATGAGGCAAGGTATTCAGCA+GGG 0.682721 4_3:+8809462 Msa0628200:CDS
AACCATAAATTCCTTCTCCG+AGG 0.691780 4_3:+8808875 Msa0628200:CDS
TCACGCTCGAGAAGGCGTGG+GGG 0.693622 4_3:+8809598 Msa0628200:CDS
GTAGCTTAGTCTCTAAAGGG+AGG 0.695642 4_3:-8808352 None:intergenic
AGGTGTTGAAAAGTACATGG+AGG 0.723372 4_3:+8804335 Msa0628200:intron
TTATGAGAGGATGGCCATCG+AGG 0.726896 4_3:+8808433 Msa0628200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATATTAACAACTTT+AGG - chr4_3:8803951-8803970 None:intergenic 10.0%
!! AAAGAAAATCAAATTAATAA+GGG - chr4_3:8804235-8804254 None:intergenic 10.0%
!! AAAAGAAAATCAAATTAATA+AGG - chr4_3:8804236-8804255 None:intergenic 10.0%
!!! TAATTGCTTTATTATAATAA+AGG + chr4_3:8805461-8805480 Msa0628200:intron 10.0%
!! ACAAAAATTAAGTTAAAAAT+AGG + chr4_3:8805674-8805693 Msa0628200:intron 10.0%
!! CAAAAATTAAGTTAAAAATA+GGG + chr4_3:8805675-8805694 Msa0628200:intron 10.0%
!!! TATTCTTTATGATATTTTAT+AGG - chr4_3:8806938-8806957 None:intergenic 10.0%
!!! TAAACATTTTAATATTATCA+AGG + chr4_3:8808010-8808029 Msa0628200:intron 10.0%
!!! TTTAAAATATTAACAACTTT+AGG - chr4_3:8803951-8803970 None:intergenic 10.0%
!!! AATTATTAAAAAGATGATTT+TGG + chr4_3:8808917-8808936 Msa0628200:CDS 10.0%
!! ATTTATAAATAACCATCAAT+TGG + chr4_3:8804605-8804624 Msa0628200:intron 15.0%
!! CATAATAATAAATTTCAACA+TGG - chr4_3:8804718-8804737 None:intergenic 15.0%
!! CATGTTGAAATTTATTATTA+TGG + chr4_3:8804716-8804735 Msa0628200:intron 15.0%
!!! ATGAATTTTTGCATTTTTTA+CGG + chr4_3:8805548-8805567 Msa0628200:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr4_3:8805706-8805725 Msa0628200:intron 15.0%
!! TGATATTCTTTCATTTAAAT+TGG - chr4_3:8805869-8805888 None:intergenic 15.0%
!! AAAACACATATTAAGTAATA+CGG + chr4_3:8805907-8805926 Msa0628200:intron 15.0%
!!! GATTTGGAATTTTAATAAAA+TGG - chr4_3:8806485-8806504 None:intergenic 15.0%
!!! TTTAATAGGAAGAATAATTT+TGG - chr4_3:8806764-8806783 None:intergenic 15.0%
!! TATTCTTCCTATTAAATATA+AGG + chr4_3:8806768-8806787 Msa0628200:intron 15.0%
!! ATTCTTCCTATTAAATATAA+GGG + chr4_3:8806769-8806788 Msa0628200:intron 15.0%
!!! ATATTTTTTCATGAATATCA+AGG - chr4_3:8807018-8807037 None:intergenic 15.0%
!!! ATAATTTGTGTAAATGAAAT+TGG + chr4_3:8807115-8807134 Msa0628200:intron 15.0%
!! TAATTTCCTAATTTGATTAA+GGG - chr4_3:8808113-8808132 None:intergenic 15.0%
!! TTAATCAAATTAGGAAATTA+GGG + chr4_3:8808113-8808132 Msa0628200:intron 15.0%
!!! TATTAGTTCTAATGATAAAT+AGG - chr4_3:8808810-8808829 None:intergenic 15.0%
!! AAAGCAAATCAAATTAATTA+GGG - chr4_3:8808847-8808866 None:intergenic 15.0%
!! AAAAGCAAATCAAATTAATT+AGG - chr4_3:8808848-8808867 None:intergenic 15.0%
!! ATTTATAAATAACCATCAAT+TGG + chr4_3:8804605-8804624 Msa0628200:intron 15.0%
!! AATAATAAATTTCAACAACA+TGG - chr4_3:8809333-8809352 None:intergenic 15.0%
!! GTTGTTGAAATTTATTATTA+TGG + chr4_3:8809334-8809353 Msa0628200:intron 15.0%
!! ACACATCATATATATATTTA+TGG - chr4_3:8809827-8809846 None:intergenic 15.0%
!! TTATTAACAAGTTTCATCAT+TGG + chr4_3:8804050-8804069 Msa0628200:intron 20.0%
!! GTTACAATGATAAGATAAAT+AGG - chr4_3:8804193-8804212 None:intergenic 20.0%
!!! AATTATTAGGAAGATGATTT+TGG + chr4_3:8804305-8804324 Msa0628200:CDS 20.0%
!!! TTGATGGTTATTTATAAATG+AGG - chr4_3:8804604-8804623 None:intergenic 20.0%
!!! ATTACTCATGTAAATTTTGT+AGG + chr4_3:8804767-8804786 Msa0628200:intron 20.0%
!! TATAGCTTATGTTATTAAGA+GGG + chr4_3:8805182-8805201 Msa0628200:intron 20.0%
!!! ACACACAACATATATATTTT+TGG - chr4_3:8805212-8805231 None:intergenic 20.0%
!!! ACAAATTTTTATCAAGTTCA+AGG - chr4_3:8805258-8805277 None:intergenic 20.0%
!! TTAAATTTGAACAAGAACTA+TGG + chr4_3:8805431-8805450 Msa0628200:intron 20.0%
!! AACATGAATTTAACAAAACA+TGG + chr4_3:8805518-8805537 Msa0628200:intron 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr4_3:8805702-8805721 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr4_3:8805705-8805724 Msa0628200:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG + chr4_3:8805766-8805785 Msa0628200:intron 20.0%
!! TTAAAAACGAAAAAGAAAGA+GGG - chr4_3:8805810-8805829 None:intergenic 20.0%
!! TATTCTTTCATTTAAATTGG+TGG - chr4_3:8805866-8805885 None:intergenic 20.0%
!! GAAAACTAATTAATTTCTTG+TGG + chr4_3:8806144-8806163 Msa0628200:intron 20.0%
!! TTAATAAAATGGAGAAATGT+TGG - chr4_3:8806474-8806493 None:intergenic 20.0%
!!! CTCATCTCTATATATTTTAA+AGG + chr4_3:8806506-8806525 Msa0628200:intron 20.0%
!! AGATTGCAAACAAAATTATT+GGG - chr4_3:8806717-8806736 None:intergenic 20.0%
!! AAGATTGCAAACAAAATTAT+TGG - chr4_3:8806718-8806737 None:intergenic 20.0%
!! AATAAGATTACTTCTAGATA+AGG + chr4_3:8806909-8806928 Msa0628200:intron 20.0%
!! ATAAGATTACTTCTAGATAA+GGG + chr4_3:8806910-8806929 Msa0628200:intron 20.0%
!!! ACAAATTTTAGGTTACTTTT+AGG - chr4_3:8807058-8807077 None:intergenic 20.0%
!!! TAAACATGCAAACAAATTTT+AGG - chr4_3:8807069-8807088 None:intergenic 20.0%
!! ATTAAACATCATGGTAAAAA+TGG - chr4_3:8807242-8807261 None:intergenic 20.0%
!! AGCATTAAAATTAAACATCA+TGG - chr4_3:8807251-8807270 None:intergenic 20.0%
!!! TGATAATATTTTTGTTACTC+TGG - chr4_3:8807320-8807339 None:intergenic 20.0%
!!! AAATTGTCAAAAAGCATTTT+CGG - chr4_3:8807756-8807775 None:intergenic 20.0%
!! CTAATTTCCTAATTTGATTA+AGG - chr4_3:8808114-8808133 None:intergenic 20.0%
!! CTTAATCAAATTAGGAAATT+AGG + chr4_3:8808112-8808131 Msa0628200:intron 20.0%
!!! TTGATGGTTATTTATAAATG+AGG - chr4_3:8804604-8804623 None:intergenic 20.0%
!! TATAGCTTATGTTATTAAGA+GGG + chr4_3:8805182-8805201 Msa0628200:intron 20.0%
!!! ACAAATTTTTATCAAGTTCA+AGG - chr4_3:8805258-8805277 None:intergenic 20.0%
!!! CTAAAATTTTTGTTTCCATC+CGG - chr4_3:8803885-8803904 None:intergenic 25.0%
! GAAACTCGATATATTGTTAA+CGG - chr4_3:8804130-8804149 None:intergenic 25.0%
!!! TTGAGTTGGATCAAATTATT+AGG + chr4_3:8804292-8804311 Msa0628200:CDS 25.0%
!!! AAGATGATTTTGGAAAGTTT+AGG + chr4_3:8804315-8804334 Msa0628200:intron 25.0%
! GGTTATTTATAAATGAGGAA+TGG - chr4_3:8804599-8804618 None:intergenic 25.0%
! CTATAGCTTATGTTATTAAG+AGG + chr4_3:8805181-8805200 Msa0628200:intron 25.0%
!! TATATGTTGTTTGCATTCAT+TGG + chr4_3:8805278-8805297 Msa0628200:intron 25.0%
!!! TCATGTTTTGACTAAATTAC+AGG - chr4_3:8805505-8805524 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr4_3:8805734-8805753 Msa0628200:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr4_3:8805735-8805754 Msa0628200:intron 25.0%
! CGAAAAGTTGACATATTTAT+AGG + chr4_3:8805765-8805784 Msa0628200:intron 25.0%
! TAAAAACGAAAAAGAAAGAG+GGG - chr4_3:8805809-8805828 None:intergenic 25.0%
! GTTAAAAACGAAAAAGAAAG+AGG - chr4_3:8805811-8805830 None:intergenic 25.0%
! ATATAGCATAATTGACACAA+TGG + chr4_3:8806017-8806036 Msa0628200:intron 25.0%
!! TGTCGTACAATTATTTTCAA+AGG - chr4_3:8806101-8806120 None:intergenic 25.0%
! ATATATAGAGATGAGAGATT+TGG - chr4_3:8806501-8806520 None:intergenic 25.0%
! GATTGCAAACAAAATTATTG+GGG - chr4_3:8806716-8806735 None:intergenic 25.0%
!!! GGTTACTTTTAGGTATATAT+AGG - chr4_3:8807048-8807067 None:intergenic 25.0%
!! TTTTTATTGTGAGAGATAAG+AGG + chr4_3:8807195-8807214 Msa0628200:intron 25.0%
!! TTTTATTGTGAGAGATAAGA+GGG + chr4_3:8807196-8807215 Msa0628200:intron 25.0%
! AAAAAATAGTTTCTCCAGTA+AGG - chr4_3:8807560-8807579 None:intergenic 25.0%
!!! TTGTGTTGTTACTACATTTT+TGG + chr4_3:8807629-8807648 Msa0628200:intron 25.0%
!!! TGTGTTGTTACTACATTTTT+GGG + chr4_3:8807630-8807649 Msa0628200:intron 25.0%
! AGTTTCCTTCTATAAATAGA+GGG - chr4_3:8807681-8807700 None:intergenic 25.0%
!!! CACTTTTATTGACTTTGATA+TGG - chr4_3:8807907-8807926 None:intergenic 25.0%
! CATATCAAAGTCAATAAAAG+TGG + chr4_3:8807905-8807924 Msa0628200:intron 25.0%
! CATTATATAACTCAATCACA+AGG + chr4_3:8808056-8808075 Msa0628200:intron 25.0%
!!! AATTATTGGAAGCTTTAGAA+TGG - chr4_3:8808168-8808187 None:intergenic 25.0%
! AGGTTATTGAAGTCAATTAT+TGG - chr4_3:8808182-8808201 None:intergenic 25.0%
!!! CTAAAATTTTTGTTTCCATC+CGG - chr4_3:8803885-8803904 None:intergenic 25.0%
! TCAATCAAGATATAATGTTG+AGG - chr4_3:8808535-8808554 None:intergenic 25.0%
!!! AAGATGATTTTGGAAAGTTT+AGG + chr4_3:8804315-8804334 Msa0628200:intron 25.0%
! TATAAATGAGGAATAGTGAA+TGG - chr4_3:8809207-8809226 None:intergenic 25.0%
!! ATTTCTCATGTAAATTTTGC+AGG + chr4_3:8809385-8809404 Msa0628200:intron 25.0%
! TTTATAATGTACCCTTCTTT+GGG - chr4_3:8809500-8809519 None:intergenic 25.0%
!! TTTTATAATGTACCCTTCTT+TGG - chr4_3:8809501-8809520 None:intergenic 25.0%
! TGTAATTTGAGAAGTAAATG+TGG - chr4_3:8809661-8809680 None:intergenic 25.0%
! ATTTACTTCTCAAATTACAC+CGG + chr4_3:8809662-8809681 Msa0628200:three_prime_UTR 25.0%
! CTATAGCTTATGTTATTAAG+AGG + chr4_3:8805181-8805200 Msa0628200:intron 25.0%
!! TATATGTTGTTTGCATTCAT+TGG + chr4_3:8805278-8805297 Msa0628200:intron 25.0%
AGGTTATTGAAGACAATTAG+TGG - chr4_3:8803561-8803580 None:intergenic 30.0%
AAGCAAATATGTCTTTACGA+AGG - chr4_3:8803692-8803711 None:intergenic 30.0%
TAAGTAGCTTAGTCTCTAAA+GGG - chr4_3:8803737-8803756 None:intergenic 30.0%
TTAAGTAGCTTAGTCTCTAA+AGG - chr4_3:8803738-8803757 None:intergenic 30.0%
TAAGATATTTGCATCCTCAA+TGG - chr4_3:8803829-8803848 None:intergenic 30.0%
! CGGATGGAAACAAAAATTTT+AGG + chr4_3:8803883-8803902 Msa0628200:CDS 30.0%
!! TTTAGGTGTTGAAAAGTACA+TGG + chr4_3:8804332-8804351 Msa0628200:intron 30.0%
!! CACTTGATTTTGGTACAATA+TGG - chr4_3:8804469-8804488 None:intergenic 30.0%
CATATTGTACCAAAATCAAG+TGG + chr4_3:8804467-8804486 Msa0628200:CDS 30.0%
! ACTACAAAACTTTCTGAAGA+AGG - chr4_3:8804540-8804559 None:intergenic 30.0%
TATAAATGAGGAATGGTGAA+TGG - chr4_3:8804592-8804611 None:intergenic 30.0%
CTTCATTAGTTACCAATTGA+TGG - chr4_3:8804620-8804639 None:intergenic 30.0%
! CATCAATTGGTAACTAATGA+AGG + chr4_3:8804618-8804637 Msa0628200:intron 30.0%
! TCATGTAAATTTTGTAGGCA+TGG + chr4_3:8804772-8804791 Msa0628200:intron 30.0%
TTTATAATGTACCCTCCATT+GGG - chr4_3:8804882-8804901 None:intergenic 30.0%
! TTTTATAATGTACCCTCCAT+TGG - chr4_3:8804883-8804902 None:intergenic 30.0%
CAAAAGGCTTAAAGAGTAAA+GGG - chr4_3:8804935-8804954 None:intergenic 30.0%
TCAAAAGGCTTAAAGAGTAA+AGG - chr4_3:8804936-8804955 None:intergenic 30.0%
AAGTATTACTACTCTCATGA+AGG + chr4_3:8805139-8805158 Msa0628200:intron 30.0%
CAACACAATACTTCTTACAA+AGG - chr4_3:8805310-8805329 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr4_3:8805721-8805740 Msa0628200:intron 30.0%
! AGAGGGGTTAAATATGTTTT+TGG - chr4_3:8805793-8805812 None:intergenic 30.0%
CTAATTAATTTCTTGTGGTC+CGG + chr4_3:8806149-8806168 Msa0628200:intron 30.0%
! TTCCTTTGAATGTGCATTTT+GGG + chr4_3:8806213-8806232 Msa0628200:intron 30.0%
!!! AAAACCAAAATTTTTGGTCC+TGG - chr4_3:8806254-8806273 None:intergenic 30.0%
!!! AGGACCAAAAATTTTGGTTT+TGG + chr4_3:8806253-8806272 Msa0628200:intron 30.0%
! GTGACCAAAACCAAAATTTT+TGG - chr4_3:8806260-8806279 None:intergenic 30.0%
! TTTTCTCGTGCATTTTTCTA+TGG + chr4_3:8806411-8806430 Msa0628200:intron 30.0%
CTTCCTATTAAATATAAGGG+AGG + chr4_3:8806772-8806791 Msa0628200:intron 30.0%
TTGCCTCCCTTATATTTAAT+AGG - chr4_3:8806778-8806797 None:intergenic 30.0%
ACTTGATATGTCATCTATGA+TGG - chr4_3:8807167-8807186 None:intergenic 30.0%
CATGGTAAAAATGGATCAAA+TGG - chr4_3:8807233-8807252 None:intergenic 30.0%
AAAATAAGTGACGAGAAAAG+AGG + chr4_3:8807347-8807366 Msa0628200:intron 30.0%
! TGAACACACAATATTTTACG+TGG + chr4_3:8807373-8807392 Msa0628200:intron 30.0%
AATAAGGGGAAAAAAAACCA+CGG + chr4_3:8807409-8807428 Msa0628200:intron 30.0%
AGTAAAGAACTTTCACTAAG+TGG + chr4_3:8807438-8807457 Msa0628200:intron 30.0%
TACCACTCTCTCTTATAAAT+AGG + chr4_3:8807504-8807523 Msa0628200:intron 30.0%
AAGTTCCCTCTATTTATAGA+AGG + chr4_3:8807673-8807692 Msa0628200:intron 30.0%
CAGTTTCCTTCTATAAATAG+AGG - chr4_3:8807682-8807701 None:intergenic 30.0%
!! GGAAAGCAACTTATTTTCTT+TGG - chr4_3:8807866-8807885 None:intergenic 30.0%
TGTGAACATTGAAAGCAAAA+GGG - chr4_3:8807937-8807956 None:intergenic 30.0%
ATGTGAACATTGAAAGCAAA+AGG - chr4_3:8807938-8807957 None:intergenic 30.0%
ACATTAACAACTCTTAAGAC+TGG - chr4_3:8807986-8808005 None:intergenic 30.0%
GCATTACCCTTAATCAAATT+AGG + chr4_3:8808104-8808123 Msa0628200:intron 30.0%
TCAAATTAGGAAATTAGGGA+AGG + chr4_3:8808117-8808136 Msa0628200:intron 30.0%
CTCTTCTAGTGAAGTAAATA+TGG - chr4_3:8808324-8808343 None:intergenic 30.0%
! CGGATGGAAACAAAAATTTT+AGG + chr4_3:8803883-8803902 Msa0628200:CDS 30.0%
TCCTTAACAAGTTTCATCAT+TGG + chr4_3:8808667-8808686 Msa0628200:intron 30.0%
!! TCCAATGATGAAACTTGTTA+AGG - chr4_3:8804054-8804073 None:intergenic 30.0%
!! GTTTACAAAGTTTTATAGCC+AGG - chr4_3:8804163-8804182 None:intergenic 30.0%
!! TTTAGGTGTTGAAAAGTACA+TGG + chr4_3:8804332-8804351 Msa0628200:intron 30.0%
!! CACTTGATTTTGGTACAATA+TGG - chr4_3:8804469-8804488 None:intergenic 30.0%
CATATTGTACCAAAATCAAG+TGG + chr4_3:8804467-8804486 Msa0628200:CDS 30.0%
CTTCATTAGTTACCAATTGA+TGG - chr4_3:8804620-8804639 None:intergenic 30.0%
TTATAATGTACCCTTCTTTG+GGG - chr4_3:8809499-8809518 None:intergenic 30.0%
CAAAAGGCTTAAAAAGCAAA+GGG - chr4_3:8809553-8809572 None:intergenic 30.0%
TCAAAAGGCTTAAAAAGCAA+AGG - chr4_3:8809554-8809573 None:intergenic 30.0%
AAGTATTACTACTCTCATGA+AGG + chr4_3:8805139-8805158 Msa0628200:intron 30.0%
CAACACAATACTTCTTACAA+AGG - chr4_3:8805310-8805329 None:intergenic 30.0%
AAGACAATTAGTGGAAGCTT+TGG - chr4_3:8803552-8803571 None:intergenic 35.0%
TGTCTTCAATAACCTCAACT+TGG + chr4_3:8803566-8803585 Msa0628200:CDS 35.0%
TACTAATGCCTTGTAGACTT+GGG - chr4_3:8803625-8803644 None:intergenic 35.0%
! TACAAGGCATTAGTAGAGTA+TGG + chr4_3:8803630-8803649 Msa0628200:CDS 35.0%
ATGTCTTTACGAAGGTCTAA+AGG - chr4_3:8803684-8803703 None:intergenic 35.0%
! GTGTCTAATAAGCCTTATGA+TGG + chr4_3:8803759-8803778 Msa0628200:intron 35.0%
! AAGCCTTATGATGGCTATAT+TGG + chr4_3:8803768-8803787 Msa0628200:intron 35.0%
TGACCAATATAGCCATCATA+AGG - chr4_3:8803774-8803793 None:intergenic 35.0%
TGGCTATATTGGTCAATATC+CGG + chr4_3:8803779-8803798 Msa0628200:CDS 35.0%
AAAGCATGACCAATATCTTG+TGG + chr4_3:8803859-8803878 Msa0628200:CDS 35.0%
!!! GTTTTGTGTCACTTGTTTGA+GGG - chr4_3:8804410-8804429 None:intergenic 35.0%
!!! AGTTTTGTGTCACTTGTTTG+AGG - chr4_3:8804411-8804430 None:intergenic 35.0%
CAAACAAGTGACACAAAACT+AGG + chr4_3:8804411-8804430 Msa0628200:CDS 35.0%
TTGTACCAAAATCAAGTGGA+AGG + chr4_3:8804471-8804490 Msa0628200:CDS 35.0%
! CTAAACCTTCCACTTGATTT+TGG - chr4_3:8804479-8804498 None:intergenic 35.0%
TGATGACCAAAGATGAACAA+TGG + chr4_3:8804502-8804521 Msa0628200:CDS 35.0%
GCTTATCCATTGTTCATCTT+TGG - chr4_3:8804511-8804530 None:intergenic 35.0%
!! GAAAGTTTTGTAGTTGTGCT+TGG + chr4_3:8804546-8804565 Msa0628200:CDS 35.0%
! ATTTTGTAGGCATGGTCAAA+CGG + chr4_3:8804780-8804799 Msa0628200:intron 35.0%
TTATAATGTACCCTCCATTG+GGG - chr4_3:8804881-8804900 None:intergenic 35.0%
AGGAACTCAGCATAATCAAA+AGG - chr4_3:8804951-8804970 None:intergenic 35.0%
AAGTATTATCACTCTCGAGA+AGG + chr4_3:8804972-8804991 Msa0628200:intron 35.0%
TGTAATTTGAGCAGTAAGTG+TGG - chr4_3:8805046-8805065 None:intergenic 35.0%
ACTTACTGCTCAAATTACAC+CGG + chr4_3:8805047-8805066 Msa0628200:intron 35.0%
CATGAGAGTAGTAATACTTG+AGG - chr4_3:8805138-8805157 None:intergenic 35.0%
GTAAATTGTCTAGAGAACAC+TGG - chr4_3:8805236-8805255 None:intergenic 35.0%
ATTCATGCACAATTTGTGTC+CGG - chr4_3:8806171-8806190 None:intergenic 35.0%
ACATTCAAAGGAACTCTTGT+CGG - chr4_3:8806206-8806225 None:intergenic 35.0%
! GTTCCTTTGAATGTGCATTT+TGG + chr4_3:8806212-8806231 Msa0628200:intron 35.0%
TTCCCAAAATGCACATTCAA+AGG - chr4_3:8806218-8806237 None:intergenic 35.0%
AAGAGAGAAGAGAGAGAAAA+TGG - chr4_3:8806325-8806344 None:intergenic 35.0%
!! TTGTTTTATGCAAACACGAG+AGG + chr4_3:8806540-8806559 Msa0628200:intron 35.0%
TCTAATCATGTTTCGCCATA+TGG + chr4_3:8806565-8806584 Msa0628200:intron 35.0%
GTTTGCAATCTTGATATGCT+TGG + chr4_3:8806726-8806745 Msa0628200:intron 35.0%
AATCTTGATATGCTTGGTTG+TGG + chr4_3:8806732-8806751 Msa0628200:intron 35.0%
! GATATGTCATCTATGATGGA+AGG - chr4_3:8807163-8807182 None:intergenic 35.0%
! TTTTCAGCTTCTCCATTGTT+GGG + chr4_3:8807292-8807311 Msa0628200:intron 35.0%
! TTTTTCCCCTTATTCGTTGA+GGG - chr4_3:8807403-8807422 None:intergenic 35.0%
!!! TTTTTTCCCCTTATTCGTTG+AGG - chr4_3:8807404-8807423 None:intergenic 35.0%
ATAAGGGGAAAAAAAACCAC+GGG + chr4_3:8807410-8807429 Msa0628200:intron 35.0%
CACTAAGTGGAAGAAATTAC+AGG + chr4_3:8807451-8807470 Msa0628200:intron 35.0%
CTCCTATTTATAAGAGAGAG+TGG - chr4_3:8807509-8807528 None:intergenic 35.0%
TTGACAATTTGCATGCTACA+AGG + chr4_3:8807766-8807785 Msa0628200:intron 35.0%
GCATGTTGAAATTGTATGCA+TGG - chr4_3:8807831-8807850 None:intergenic 35.0%
ATGCTTGCTTAGTTTAAGCT+AGG - chr4_3:8808088-8808107 None:intergenic 35.0%
TGACTTCAATAACCTCAACT+TGG + chr4_3:8808187-8808206 Msa0628200:CDS 35.0%
TGCTAATGCCTTATAGACTT+GGG - chr4_3:8808246-8808265 None:intergenic 35.0%
! TATAAGGCATTAGCAGAGTA+TGG + chr4_3:8808251-8808270 Msa0628200:CDS 35.0%
! AAGTAAATATGGCTTTGCGA+AGG - chr4_3:8808313-8808332 None:intergenic 35.0%
TGAGTAGCTTAGTCTCTAAA+GGG - chr4_3:8808358-8808377 None:intergenic 35.0%
TTGAGTAGCTTAGTCTCTAA+AGG - chr4_3:8808359-8808378 None:intergenic 35.0%
! GTGTCTAATAAGCCTTATGA+TGG + chr4_3:8803759-8803778 Msa0628200:intron 35.0%
TAAGATATTTGCATCCTCGA+TGG - chr4_3:8808450-8808469 None:intergenic 35.0%
AAAGCATGACCAATATCTTG+TGG + chr4_3:8803859-8803878 Msa0628200:CDS 35.0%
AACAAGTTTCATCATTGGAG+AGG + chr4_3:8804055-8804074 Msa0628200:intron 35.0%
!!! GTTTTGTGTCACTTGTTTGA+GGG - chr4_3:8804410-8804429 None:intergenic 35.0%
!!! AGTTTTGTGTCACTTGTTTG+AGG - chr4_3:8804411-8804430 None:intergenic 35.0%
CAAACAAGTGACACAAAACT+AGG + chr4_3:8804411-8804430 Msa0628200:CDS 35.0%
TTGTACCAAAATCAAGTGGA+AGG + chr4_3:8804471-8804490 Msa0628200:CDS 35.0%
! CTAAACCTTCCACTTGATTT+TGG - chr4_3:8804479-8804498 None:intergenic 35.0%
TTAGAGATGATGACCAAAGA+TGG + chr4_3:8804495-8804514 Msa0628200:CDS 35.0%
! TCATGTAAATTTTGCAGGCA+TGG + chr4_3:8809390-8809409 Msa0628200:intron 35.0%
TATAATGTACCCTTCTTTGG+GGG - chr4_3:8809498-8809517 None:intergenic 35.0%
AGGGTACATTATAAAAGCTC+CGG + chr4_3:8804887-8804906 Msa0628200:CDS 35.0%
AGGAACTCAGCATAATCAAA+AGG - chr4_3:8804951-8804970 None:intergenic 35.0%
CATGAGAGTAGTAATACTTG+AGG - chr4_3:8805138-8805157 None:intergenic 35.0%
!! AATTAGTGGAAGCTTTGGAG+TGG - chr4_3:8803547-8803566 None:intergenic 40.0%
! TAACTCCCAATTGGGACTTT+TGG - chr4_3:8803595-8803614 None:intergenic 40.0%
GACTTCACTAACTCCCAATT+GGG - chr4_3:8803603-8803622 None:intergenic 40.0%
CTACTAATGCCTTGTAGACT+TGG - chr4_3:8803626-8803645 None:intergenic 40.0%
CTATATTGGTCAATATCCGG+TGG + chr4_3:8803782-8803801 Msa0628200:CDS 40.0%
AACCATACATTCCTTCTCTG+AGG + chr4_3:8804263-8804282 Msa0628200:CDS 40.0%
!! AGGTGTTGAAAAGTACATGG+AGG + chr4_3:8804335-8804354 Msa0628200:intron 40.0%
TGTACTTCATAACCCTGAGA+CGG - chr4_3:8804383-8804402 None:intergenic 40.0%
CTCAGGGTTATGAAGTACAA+AGG + chr4_3:8804384-8804403 Msa0628200:CDS 40.0%
! TTTTGTAGGCATGGTCAAAC+GGG + chr4_3:8804781-8804800 Msa0628200:intron 40.0%
GTACATTATAAAAGCTCCCG+TGG + chr4_3:8804890-8804909 Msa0628200:CDS 40.0%
CTCGAGAGTGATAATACTTG+AGG - chr4_3:8804971-8804990 None:intergenic 40.0%
! TTTGCTATCCGCACTTATTG+TGG + chr4_3:8805008-8805027 Msa0628200:intron 40.0%
CTCAAACACCACAATAAGTG+CGG - chr4_3:8805019-8805038 None:intergenic 40.0%
!! CATTTTGGGAAACACTTGTG+TGG + chr4_3:8806227-8806246 Msa0628200:intron 40.0%
! TGGACCAGGACCAAAAATTT+TGG + chr4_3:8806247-8806266 Msa0628200:intron 40.0%
ATGCACGAGAAAATCTTGTG+TGG - chr4_3:8806404-8806423 None:intergenic 40.0%
TCGACAAGACTCAAACCATA+TGG - chr4_3:8806583-8806602 None:intergenic 40.0%
GATGGAAGGCTAAGTTGTTA+AGG - chr4_3:8807149-8807168 None:intergenic 40.0%
! GTTTTCAGCTTCTCCATTGT+TGG + chr4_3:8807291-8807310 Msa0628200:intron 40.0%
! TTTTCCCCTTATTCGTTGAG+GGG - chr4_3:8807402-8807421 None:intergenic 40.0%
TAAGGGGAAAAAAAACCACG+GGG + chr4_3:8807411-8807430 Msa0628200:intron 40.0%
AGGACCTCTCTCTAAATACA+AGG + chr4_3:8807471-8807490 Msa0628200:intron 40.0%
CTCTCCTTGTATTTAGAGAG+AGG - chr4_3:8807478-8807497 None:intergenic 40.0%
CAATCTAGGAGAAACCTTAC+TGG + chr4_3:8807543-8807562 Msa0628200:intron 40.0%
TGCCGAACAAAACAAAGCAA+AGG + chr4_3:8807700-8807719 Msa0628200:intron 40.0%
GCCGAACAAAACAAAGCAAA+GGG + chr4_3:8807701-8807720 Msa0628200:intron 40.0%
!!! GCCCTTTGCTTTGTTTTGTT+CGG - chr4_3:8807705-8807724 None:intergenic 40.0%
ACAAAACAAAGCAAAGGGCA+TGG + chr4_3:8807706-8807725 Msa0628200:intron 40.0%
TCAAGCAGCGAAAGCAATTT+GGG + chr4_3:8807789-8807808 Msa0628200:intron 40.0%
TGGAACATGTAATAGCAACG+TGG - chr4_3:8807887-8807906 None:intergenic 40.0%
AAGACTGGATCCTCAAAACA+CGG - chr4_3:8807971-8807990 None:intergenic 40.0%
TTAGGAAATTAGGGAAGGAC+CGG + chr4_3:8808122-8808141 Msa0628200:intron 40.0%
! TTCTGAGCCCATATTTTCAC+CGG - chr4_3:8808144-8808163 None:intergenic 40.0%
! TAACTCCCAATTGGGACTTT+TGG - chr4_3:8803595-8803614 None:intergenic 40.0%
GACTTCACTAACTCCCAATT+GGG - chr4_3:8803603-8803622 None:intergenic 40.0%
AGTGAAGTCCCAAGTCTATA+AGG + chr4_3:8808235-8808254 Msa0628200:CDS 40.0%
CTGCTAATGCCTTATAGACT+TGG - chr4_3:8808247-8808266 None:intergenic 40.0%
! AAGCCTTATGATGGCTATCT+TGG + chr4_3:8808389-8808408 Msa0628200:intron 40.0%
TGACCAAGATAGCCATCATA+AGG - chr4_3:8808395-8808414 None:intergenic 40.0%
CTCTCATAAAGTGGAACTAC+AGG - chr4_3:8808422-8808441 None:intergenic 40.0%
CTGTAGTTCCACTTTATGAG+AGG + chr4_3:8808420-8808439 Msa0628200:CDS 40.0%
AGTTCCACTTTATGAGAGGA+TGG + chr4_3:8808424-8808443 Msa0628200:CDS 40.0%
CAAGTTTCTTCAAAGTGACC+TGG + chr4_3:8808759-8808778 Msa0628200:intron 40.0%
AACCATAAATTCCTTCTCCG+AGG + chr4_3:8808875-8808894 Msa0628200:CDS 40.0%
ATCCAACTCAATTAGCTCCT+CGG - chr4_3:8804283-8804302 None:intergenic 40.0%
!! AGGTGTTGAAAAGTACATGG+AGG + chr4_3:8804335-8804354 Msa0628200:intron 40.0%
ACTCAACCAATTACCATCTC+AGG + chr4_3:8808979-8808998 Msa0628200:intron 40.0%
CTCAACCAATTACCATCTCA+GGG + chr4_3:8808980-8808999 Msa0628200:intron 40.0%
CATAACCCTGAGATGGTAAT+TGG - chr4_3:8808988-8809007 None:intergenic 40.0%
TGTACTTCATAACCCTGAGA+TGG - chr4_3:8804383-8804402 None:intergenic 40.0%
CTCAGGGTTATGAAGTACAA+AGG + chr4_3:8804384-8804403 Msa0628200:CDS 40.0%
ACAAAGTTCTTGTCAGTGTG+TGG - chr4_3:8809056-8809075 None:intergenic 40.0%
TGATGACCAAAGATGGACAA+TGG + chr4_3:8809114-8809133 Msa0628200:intron 40.0%
GCTTATCCATTGTCCATCTT+TGG - chr4_3:8809123-8809142 None:intergenic 40.0%
AGCTACAAGTCTTCTTCTTC+AGG + chr4_3:8809140-8809159 Msa0628200:intron 40.0%
!! GGCAGTTTTGTAGTTGTGAT+TGG + chr4_3:8809161-8809180 Msa0628200:intron 40.0%
! ATTTTGCAGGCATGGTCAAA+CGG + chr4_3:8809398-8809417 Msa0628200:intron 40.0%
GTACATTATAAAAGCTCCGG+AGG + chr4_3:8809508-8809527 Msa0628200:CDS 40.0%
! AAGTATTTTCACGCTCGAGA+AGG + chr4_3:8809590-8809609 Msa0628200:CDS 40.0%
! GACTTTTGGCATCCAAGTTG+AGG - chr4_3:8803581-8803600 None:intergenic 45.0%
TGGATGCCAAAAGTCCCAAT+TGG + chr4_3:8803586-8803605 Msa0628200:CDS 45.0%
GGATGCCAAAAGTCCCAATT+GGG + chr4_3:8803587-8803606 Msa0628200:CDS 45.0%
GGACTTCACTAACTCCCAAT+TGG - chr4_3:8803604-8803623 None:intergenic 45.0%
AGTGAAGTCCCAAGTCTACA+AGG + chr4_3:8803614-8803633 Msa0628200:CDS 45.0%
! GTAGCTTAGTCTCTAAAGGG+AGG - chr4_3:8803734-8803753 None:intergenic 45.0%
CTCTCATAAAGTGGAACCAC+CGG - chr4_3:8803801-8803820 None:intergenic 45.0%
GGTTCCACTTTATGAGAGCA+TGG + chr4_3:8803803-8803822 Msa0628200:CDS 45.0%
ATGGCCATGCTCTCATAAAG+TGG - chr4_3:8803810-8803829 None:intergenic 45.0%
! TTATGAGAGCATGGCCATTG+AGG + chr4_3:8803812-8803831 Msa0628200:CDS 45.0%
CATGACCAATATCTTGTGGC+CGG + chr4_3:8803863-8803882 Msa0628200:CDS 45.0%
CGAGTTTCTTCAAAGTGACG+TGG + chr4_3:8804142-8804161 Msa0628200:intron 45.0%
CTCCTCAGAGAAGGAATGTA+TGG - chr4_3:8804268-8804287 None:intergenic 45.0%
CTCAATTAGCTCCTCAGAGA+AGG - chr4_3:8804277-8804296 None:intergenic 45.0%
! CTCTGAGGAGCTAATTGAGT+TGG + chr4_3:8804278-8804297 Msa0628200:CDS 45.0%
ACTCAACCAATTACCGTCTC+AGG + chr4_3:8804367-8804386 Msa0628200:CDS 45.0%
CTCAACCAATTACCGTCTCA+GGG + chr4_3:8804368-8804387 Msa0628200:CDS 45.0%
CATAACCCTGAGACGGTAAT+TGG - chr4_3:8804376-8804395 None:intergenic 45.0%
ACAAAGTTCTTGTCCGTGTG+TGG - chr4_3:8804444-8804463 None:intergenic 45.0%
AATGCAAGTGACCACGATCT+GGG - chr4_3:8804688-8804707 None:intergenic 45.0%
AAATGCAAGTGACCACGATC+TGG - chr4_3:8804689-8804708 None:intergenic 45.0%
! AATGAGGCAAGGTATTCAGC+AGG + chr4_3:8804843-8804862 Msa0628200:CDS 45.0%
! ATGAGGCAAGGTATTCAGCA+GGG + chr4_3:8804844-8804863 Msa0628200:CDS 45.0%
TTGTTCTCTAACCCCAATGG+AGG + chr4_3:8804867-8804886 Msa0628200:CDS 45.0%
TGTTCTCTAACCCCAATGGA+GGG + chr4_3:8804868-8804887 Msa0628200:CDS 45.0%
TTATCACTCTCGAGAAGGCA+TGG + chr4_3:8804977-8804996 Msa0628200:intron 45.0%
! TATCACTCTCGAGAAGGCAT+GGG + chr4_3:8804978-8804997 Msa0628200:intron 45.0%
!! ATTACACCGGTGTTACGTCT+AGG + chr4_3:8805060-8805079 Msa0628200:intron 45.0%
ACACTACCTAGACGTAACAC+CGG - chr4_3:8805069-8805088 None:intergenic 45.0%
ACTACTCTCATGAAGGCCAA+AGG + chr4_3:8805146-8805165 Msa0628200:intron 45.0%
CTACTCTCATGAAGGCCAAA+GGG + chr4_3:8805147-8805166 Msa0628200:intron 45.0%
ATAGCTCAAACCCATCCCTT+TGG - chr4_3:8805165-8805184 None:intergenic 45.0%
GAGAGAACAGAAGAGAGAGA+AGG - chr4_3:8806298-8806317 None:intergenic 45.0%
GAGAAAATCTTGTGTGGTCC+TGG - chr4_3:8806398-8806417 None:intergenic 45.0%
GGAAGGCTAAGTTGTTAAGG+AGG - chr4_3:8807146-8807165 None:intergenic 45.0%
TGCTTCTCTTCTCTAGTGAG+AGG + chr4_3:8807267-8807286 Msa0628200:intron 45.0%
GTTACTCTGGTACCCAACAA+TGG - chr4_3:8807307-8807326 None:intergenic 45.0%
TGGAAACCCCTCAACGAATA+AGG + chr4_3:8807393-8807412 Msa0628200:intron 45.0%
GGAAACCCCTCAACGAATAA+GGG + chr4_3:8807394-8807413 Msa0628200:intron 45.0%
GAAACCCCTCAACGAATAAG+GGG + chr4_3:8807395-8807414 Msa0628200:intron 45.0%
ATAGAGGGAACTTGCAGCAA+AGG - chr4_3:8807666-8807685 None:intergenic 45.0%
GTCAAGCAGCGAAAGCAATT+TGG + chr4_3:8807788-8807807 Msa0628200:intron 45.0%
GGAAGGACCGGTGAAAATAT+GGG + chr4_3:8808134-8808153 Msa0628200:intron 45.0%
!!! GACTTTTGGCTTCCAAGTTG+AGG - chr4_3:8808202-8808221 None:intergenic 45.0%
TGGAAGCCAAAAGTCCCAAT+TGG + chr4_3:8808207-8808226 Msa0628200:CDS 45.0%
GGAAGCCAAAAGTCCCAATT+GGG + chr4_3:8808208-8808227 Msa0628200:CDS 45.0%
GGACTTCACTAACTCCCAAT+TGG - chr4_3:8803604-8803623 None:intergenic 45.0%
! ATGGCTTTGCGAAGGTGTAA+AGG - chr4_3:8808305-8808324 None:intergenic 45.0%
! GTAGCTTAGTCTCTAAAGGG+AGG - chr4_3:8803734-8803753 None:intergenic 45.0%
ATGGCCATCCTCTCATAAAG+TGG - chr4_3:8808431-8808450 None:intergenic 45.0%
CATGACCAATATCTTGTGGC+CGG + chr4_3:8803863-8803882 Msa0628200:CDS 45.0%
CTCCTCGGAGAAGGAATTTA+TGG - chr4_3:8808880-8808899 None:intergenic 45.0%
AATGCATGTGACCACGATCT+GGG - chr4_3:8809303-8809322 None:intergenic 45.0%
AAATGCATGTGACCACGATC+TGG - chr4_3:8809304-8809323 None:intergenic 45.0%
! TTTTGCAGGCATGGTCAAAC+GGG + chr4_3:8809399-8809418 Msa0628200:intron 45.0%
! AATGAGGCAAGGTATTCAGC+AGG + chr4_3:8804843-8804862 Msa0628200:CDS 45.0%
! ATGAGGCAAGGTATTCAGCA+GGG + chr4_3:8804844-8804863 Msa0628200:CDS 45.0%
TTGTTCTCTACCCCCAAAGA+AGG + chr4_3:8809485-8809504 Msa0628200:CDS 45.0%
TGTTCTCTACCCCCAAAGAA+GGG + chr4_3:8809486-8809505 Msa0628200:CDS 45.0%
CTCGAGCGTGAAAATACTTG+AGG - chr4_3:8809589-8809608 None:intergenic 45.0%
!! AATTACACCGGTGTTACGTC+TGG + chr4_3:8805059-8805078 Msa0628200:intron 45.0%
!! ATTACACCGGTGTTACGTCT+GGG + chr4_3:8805060-8805079 Msa0628200:intron 45.0%
ACTACTCTCATGAAGGCCAA+AGG + chr4_3:8805146-8805165 Msa0628200:intron 45.0%
CTACTCTCATGAAGGCCAAA+GGG + chr4_3:8805147-8805166 Msa0628200:intron 45.0%
ATAGCTCAAACCCATCCCTT+TGG - chr4_3:8805165-8805184 None:intergenic 45.0%
!!! TTAAAAATTCTAATTTTTTT+AGG + chr4_3:8805601-8805620 Msa0628200:intron 5.0%
!!! ATAACATAATTTATTTTATT+TGG + chr4_3:8805989-8806008 Msa0628200:intron 5.0%
ACCAATATCTTGTGGCCGGA+TGG + chr4_3:8803867-8803886 Msa0628200:CDS 50.0%
TCCATCCGGCCACAAGATAT+TGG - chr4_3:8803871-8803890 None:intergenic 50.0%
CTCATCATCACCCGGTGAAA+TGG - chr4_3:8804819-8804838 None:intergenic 50.0%
! TTCACCGGGTGATGATGAGT+CGG + chr4_3:8804820-8804839 Msa0628200:CDS 50.0%
CATTCCGACTCATCATCACC+CGG - chr4_3:8804827-8804846 None:intergenic 50.0%
! GGTGATGATGAGTCGGAATG+AGG + chr4_3:8804827-8804846 Msa0628200:CDS 50.0%
TGATGAGTCGGAATGAGGCA+AGG + chr4_3:8804832-8804851 Msa0628200:CDS 50.0%
GGGTTGTTCTCTAACCCCAA+TGG + chr4_3:8804864-8804883 Msa0628200:CDS 50.0%
TATAAAAGCTCCCGTGGAGC+TGG + chr4_3:8804896-8804915 Msa0628200:CDS 50.0%
! ATCACTCTCGAGAAGGCATG+GGG + chr4_3:8804979-8804998 Msa0628200:intron 50.0%
TCTCATGAAGGCCAAAGGGA+TGG + chr4_3:8805151-8805170 Msa0628200:intron 50.0%
CTCATGAAGGCCAAAGGGAT+GGG + chr4_3:8805152-8805171 Msa0628200:intron 50.0%
GTGACCAAAGACCACTTGTG+TGG + chr4_3:8806371-8806390 Msa0628200:intron 50.0%
TGGTCCACACAAGTGGTCTT+TGG - chr4_3:8806378-8806397 None:intergenic 50.0%
AAAGACCACTTGTGTGGACC+AGG + chr4_3:8806377-8806396 Msa0628200:intron 50.0%
GTGTCTGCATCAGCATCTCT+TGG - chr4_3:8806867-8806886 None:intergenic 50.0%
AGTTCTTTACTCTTGCCCCG+TGG - chr4_3:8807429-8807448 None:intergenic 50.0%
GGATCCTCAAAACACGGAGA+GGG - chr4_3:8807965-8807984 None:intergenic 50.0%
TGGATCCTCAAAACACGGAG+AGG - chr4_3:8807966-8807985 None:intergenic 50.0%
GGGAAGGACCGGTGAAAATA+TGG + chr4_3:8808133-8808152 Msa0628200:intron 50.0%
TTATGAGAGGATGGCCATCG+AGG + chr4_3:8808433-8808452 Msa0628200:CDS 50.0%
ACCAATATCTTGTGGCCGGA+TGG + chr4_3:8803867-8803886 Msa0628200:CDS 50.0%
TCCATCCGGCCACAAGATAT+TGG - chr4_3:8803871-8803890 None:intergenic 50.0%
CTCAATTAGCTCCTCGGAGA+AGG - chr4_3:8808889-8808908 None:intergenic 50.0%
CTCCGAGGAGCTAATTGAGT+TGG + chr4_3:8808890-8808909 Msa0628200:CDS 50.0%
! TCTTGTCAGTGTGTGGACTG+AGG - chr4_3:8809049-8809068 None:intergenic 50.0%
CTCATCATCACCCGGTGAAA+TGG - chr4_3:8804819-8804838 None:intergenic 50.0%
! TTTCACCGGGTGATGATGAG+TGG + chr4_3:8804819-8804838 Msa0628200:CDS 50.0%
! TTCACCGGGTGATGATGAGT+GGG + chr4_3:8804820-8804839 Msa0628200:CDS 50.0%
CATTCCCACTCATCATCACC+CGG - chr4_3:8809445-8809464 None:intergenic 50.0%
! GGTGATGATGAGTGGGAATG+AGG + chr4_3:8809445-8809464 Msa0628200:CDS 50.0%
TGATGAGTGGGAATGAGGCA+AGG + chr4_3:8809450-8809469 Msa0628200:CDS 50.0%
TATAAAAGCTCCGGAGGAGC+TGG + chr4_3:8809514-8809533 Msa0628200:CDS 50.0%
ACACTACCCAGACGTAACAC+CGG - chr4_3:8809684-8809703 None:intergenic 50.0%
TCTCATGAAGGCCAAAGGGA+TGG + chr4_3:8805151-8805170 Msa0628200:intron 50.0%
CTCATGAAGGCCAAAGGGAT+GGG + chr4_3:8805152-8805171 Msa0628200:intron 50.0%
ACTAGGCCTCAGTCCACACA+CGG + chr4_3:8804428-8804447 Msa0628200:CDS 55.0%
! TCTTGTCCGTGTGTGGACTG+AGG - chr4_3:8804437-8804456 None:intergenic 55.0%
TGATGTCGTAGCCCAGATCG+TGG + chr4_3:8804674-8804693 Msa0628200:intron 55.0%
TGTAGGCATGGTCAAACGGG+AGG + chr4_3:8804784-8804803 Msa0628200:intron 55.0%
GGCTGCATTCGCCATTTCAC+CGG + chr4_3:8804805-8804824 Msa0628200:CDS 55.0%
GCTGCATTCGCCATTTCACC+GGG + chr4_3:8804806-8804825 Msa0628200:CDS 55.0%
! TCACTCTCGAGAAGGCATGG+GGG + chr4_3:8804980-8804999 Msa0628200:intron 55.0%
GGGAAACACTTGTGTGGACC+AGG + chr4_3:8806233-8806252 Msa0628200:intron 55.0%
CCTCAAAACACGGAGAGGGA+TGG - chr4_3:8807961-8807980 None:intergenic 55.0%
! CCATCCCTCTCCGTGTTTTG+AGG + chr4_3:8807958-8807977 Msa0628200:intron 55.0%
GGCTGCATTCGCCATTTCAC+CGG + chr4_3:8804805-8804824 Msa0628200:CDS 55.0%
GCTGCATTCGCCATTTCACC+GGG + chr4_3:8804806-8804825 Msa0628200:CDS 55.0%
! TTTTCACGCTCGAGAAGGCG+TGG + chr4_3:8809595-8809614 Msa0628200:CDS 55.0%
! TTTCACGCTCGAGAAGGCGT+GGG + chr4_3:8809596-8809615 Msa0628200:CDS 55.0%
CGGTCTGTGCGCACTTATTG+TGG + chr4_3:8809623-8809642 Msa0628200:CDS 55.0%
AAAAGCTCCCGTGGAGCTGG+TGG + chr4_3:8804899-8804918 Msa0628200:CDS 60.0%
TCCTCATCCACCAGCTCCAC+GGG - chr4_3:8804909-8804928 None:intergenic 60.0%
CTCCTCATCCACCAGCTCCA+CGG - chr4_3:8804910-8804929 None:intergenic 60.0%
GTGGTCCTGGTCCACACAAG+TGG - chr4_3:8806385-8806404 None:intergenic 60.0%
TGATGTCGCAGCCCAGATCG+TGG + chr4_3:8809289-8809308 Msa0628200:intron 60.0%
TGCAGGCATGGTCAAACGGG+AGG + chr4_3:8809402-8809421 Msa0628200:intron 60.0%
AAAAGCTCCGGAGGAGCTGG+TGG + chr4_3:8809517-8809536 Msa0628200:CDS 60.0%
TCCTCATCCACCAGCTCCTC+CGG - chr4_3:8809527-8809546 None:intergenic 60.0%
! TTCACGCTCGAGAAGGCGTG+GGG + chr4_3:8809597-8809616 Msa0628200:CDS 60.0%
! TCCCGTGGAGCTGGTGGATG+AGG + chr4_3:8804905-8804924 Msa0628200:CDS 65.0%
! CTCGAGAAGGCATGGGGGCT+CGG + chr4_3:8804985-8805004 Msa0628200:intron 65.0%
! TCCGGAGGAGCTGGTGGATG+AGG + chr4_3:8809523-8809542 Msa0628200:CDS 65.0%
! TCACGCTCGAGAAGGCGTGG+GGG + chr4_3:8809598-8809617 Msa0628200:CDS 65.0%
! CTCGAGAAGGCGTGGGGGCT+CGG + chr4_3:8809603-8809622 Msa0628200:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 8803531 8810037 8803531 ID=Msa0628200;Name=Msa0628200
chr4_3 mRNA 8803531 8810037 8803531 ID=Msa0628200-mRNA-1;Parent=Msa0628200;Name=Msa0628200-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0.37|0.11|1|0.37|0.11|9|385|520
chr4_3 exon 8803531 8803758 8803531 ID=Msa0628200-mRNA-1:exon:2569;Parent=Msa0628200-mRNA-1
chr4_3 exon 8803771 8803904 8803771 ID=Msa0628200-mRNA-1:exon:2570;Parent=Msa0628200-mRNA-1
chr4_3 exon 8804260 8804330 8804260 ID=Msa0628200-mRNA-1:exon:2571;Parent=Msa0628200-mRNA-1
chr4_3 exon 8804337 8804581 8804337 ID=Msa0628200-mRNA-1:exon:2572;Parent=Msa0628200-mRNA-1
chr4_3 exon 8804789 8804973 8804789 ID=Msa0628200-mRNA-1:exon:2573;Parent=Msa0628200-mRNA-1
chr4_3 exon 8808139 8808379 8808139 ID=Msa0628200-mRNA-1:exon:2574;Parent=Msa0628200-mRNA-1
chr4_3 exon 8808392 8808525 8808392 ID=Msa0628200-mRNA-1:exon:2575;Parent=Msa0628200-mRNA-1
chr4_3 exon 8808872 8808950 8808872 ID=Msa0628200-mRNA-1:exon:2576;Parent=Msa0628200-mRNA-1
chr4_3 exon 8809407 8810037 8809407 ID=Msa0628200-mRNA-1:exon:2577;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8803531 8803758 8803531 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8803771 8803904 8803771 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8804260 8804330 8804260 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8804337 8804581 8804337 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8804789 8804973 8804789 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8808139 8808379 8808139 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8808392 8808525 8808392 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8808872 8808950 8808872 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 CDS 8809407 8809652 8809407 ID=Msa0628200-mRNA-1:cds;Parent=Msa0628200-mRNA-1
chr4_3 three_prime_UTR 8809653 8810037 8809653 ID=Msa0628200-mRNA-1:three_prime_utr;Parent=Msa0628200-mRNA-1
Gene Sequence

>Msa0628200

ATGGGCTCAGAAACCACTCCAAAGCTTCCACTAATTGTCTTCAATAACCTCAACTTGGATGCCAAAAGTCCCAATTGGGAGTTAGTGAAGTCCCAAGTCTACAAGGCATTAGTAGAGTATGGTTGCTTTGAAGCAATTTTTGATAAAGTTCCTTTAGACCTTCGTAAAGACATATTTGCTTCAATAGAAGAGCTCTTTGACCTCCCTTTAGAGACTAAGCTACTTAATCCTTATGATGGCTATATTGGTCAATATCCGGTGGTTCCACTTTATGAGAGCATGGCCATTGAGGATGCAAATATCTTAGAGAAAGTAAAAAGCATGACCAATATCTTGTGGCCGGATGGAAACAAAAATTTTAGTGAAACCATACATTCCTTCTCTGAGGAGCTAATTGAGTTGGATCAAATTATTAGGAAGATGATTTTGGAAAGTGTTGAAAAGTACATGGAGGAACACATGAACTCAACCAATTACCGTCTCAGGGTTATGAAGTACAAAGGCCCTCAAACAAGTGACACAAAACTAGGCCTCAGTCCACACACGGACAAGAACTTTGTGACCATATTGTACCAAAATCAAGTGGAAGGTTTAGAGATGATGACCAAAGATGAACAATGGATAAGCTACAAGCCTTCTTCAGAAAGTTTTGTAGTTGTGCTTGGTGATTCTATGCATGCATGGTCAAACGGGAGGCTGCATTCGCCATTTCACCGGGTGATGATGAGTCGGAATGAGGCAAGGTATTCAGCAGGGTTGTTCTCTAACCCCAATGGAGGGTACATTATAAAAGCTCCCGTGGAGCTGGTGGATGAGGAGCACCCTTTACTCTTTAAGCCTTTTGATTATGCTGAGTTCCTCAAGACCGGTGAAAATATGGGCTCAGAAACCATTCTAAAGCTTCCAATAATTGACTTCAATAACCTCAACTTGGAAGCCAAAAGTCCCAATTGGGAGTTAGTGAAGTCCCAAGTCTATAAGGCATTAGCAGAGTATGGTTGCTTCGAAGCAATTTTTGATAAAGTTCCTTTACACCTTCGCAAAGCCATATTTACTTCACTAGAAGAGCTCTTTGACCTCCCTTTAGAGACTAAGCTACTCAATCCTTATGATGGCTATCTTGGTCAATATCCTGTAGTTCCACTTTATGAGAGGATGGCCATCGAGGATGCAAATATCTTAGAGAAAGTAAAAAGCATGACCAATATCTTGTGGCCGGATGGAAACAAAAATTTTAGTGAAACCATAAATTCCTTCTCCGAGGAGCTAATTGAGTTGGATCAAATTATTAAAAAGATGATTTTGGAAAGTTTAGGTGCATGGTCAAACGGGAGGCTGCATTCGCCATTTCACCGGGTGATGATGAGTGGGAATGAGGCAAGGTATTCAGCAGGGTTGTTCTCTACCCCCAAAGAAGGGTACATTATAAAAGCTCCGGAGGAGCTGGTGGATGAGGAGCACCCTTTGCTTTTTAAGCCTTTTGATTATGCTGAGTTCCTCAAGTATTTTCACGCTCGAGAAGGCGTGGGGGCTCGGTCTGTGCGCACTTATTGTGGTGTTTGA
Protein sequence

>Msa0628200

MGSETTPKLPLIVFNNLNLDAKSPNWELVKSQVYKALVEYGCFEAIFDKVPLDLRKDIFASIEELFDLPLETKLLNPYDGYIGQYPVVPLYESMAIEDANILEKVKSMTNILWPDGNKNFSETIHSFSEELIELDQIIRKMILESVEKYMEEHMNSTNYRLRVMKYKGPQTSDTKLGLSPHTDKNFVTILYQNQVEGLEMMTKDEQWISYKPSSESFVVVLGDSMHAWSNGRLHSPFHRVMMSRNEARYSAGLFSNPNGGYIIKAPVELVDEEHPLLFKPFDYAEFLKTGENMGSETILKLPIIDFNNLNLEAKSPNWELVKSQVYKALAEYGCFEAIFDKVPLHLRKAIFTSLEELFDLPLETKLLNPYDGYLGQYPVVPLYERMAIEDANILEKVKSMTNILWPDGNKNFSETINSFSEELIELDQIIKKMILESLGAWSNGRLHSPFHRVMMSGNEARYSAGLFSTPKEGYIIKAPEELVDEEHPLLFKPFDYAEFLKYFHAREGVGARSVRTYCGV*