AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1302630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302630 MtrunA17_Chr2g0289341 87.055 309 38 2 1 308 1 308 0.0 551
Msa1302630 MtrunA17_Chr3g0121141 75.000 316 75 2 1 315 1 313 4.72e-180 499
Msa1302630 MtrunA17_Chr5g0439011 72.990 311 81 2 1 310 2 310 1.20e-172 481
Msa1302630 MtrunA17_Chr3g0125201 53.226 310 132 5 5 306 4 308 1.20e-107 316
Msa1302630 MtrunA17_Chr4g0075431 93.252 163 10 1 1 163 1 162 3.81e-99 289
Msa1302630 MtrunA17_Chr6g0488511 47.368 304 146 5 5 304 4 297 6.38e-98 291
Msa1302630 MtrunA17_Chr4g0075471 97.826 138 3 0 154 291 24 161 4.59e-97 283
Msa1302630 MtrunA17_Chr5g0437181 36.825 315 185 6 1 305 46 356 1.21e-66 213
Msa1302630 MtrunA17_Chr3g0113641 36.218 312 185 6 4 305 50 357 2.14e-63 204
Msa1302630 MtrunA17_Chr7g0242551 35.669 314 185 6 4 305 54 362 4.31e-61 198
Msa1302630 MtrunA17_Chr8g0375571 36.559 279 158 5 3 268 44 316 9.10e-61 197
Msa1302630 MtrunA17_Chr4g0006371 34.628 309 189 5 5 303 63 368 8.53e-60 195
Msa1302630 MtrunA17_Chr8g0375671 33.987 306 183 7 3 296 51 349 1.09e-57 189
Msa1302630 MtrunA17_Chr8g0375601 33.770 305 188 6 1 296 45 344 7.78e-57 187
Msa1302630 MtrunA17_Chr3g0109041 37.542 301 166 10 4 288 42 336 1.63e-56 186
Msa1302630 MtrunA17_Chr3g0128001 33.447 293 176 7 1 284 35 317 7.97e-54 179
Msa1302630 MtrunA17_Chr8g0345831 33.893 298 168 7 2 284 40 323 2.37e-53 178
Msa1302630 MtrunA17_Chr8g0365241 30.164 305 197 5 1 296 54 351 3.12e-53 178
Msa1302630 MtrunA17_Chr5g0423191 31.908 304 192 6 1 296 44 340 6.82e-53 177
Msa1302630 MtrunA17_Chr2g0314381 32.013 303 191 7 3 296 76 372 1.34e-52 177
Msa1302630 MtrunA17_Chr5g0420951 30.492 305 194 6 2 296 51 347 2.44e-52 176
Msa1302630 MtrunA17_Chr2g0314401 34.307 274 169 5 3 268 50 320 7.58e-52 174
Msa1302630 MtrunA17_Chr5g0421041 31.561 301 193 6 3 296 44 338 3.60e-51 172
Msa1302630 MtrunA17_Chr5g0420981 29.180 305 200 5 1 296 50 347 5.68e-51 172
Msa1302630 MtrunA17_Chr1g0162191 34.672 274 168 6 1 266 44 314 8.69e-51 171
Msa1302630 MtrunA17_Chr5g0421011 30.592 304 196 6 1 296 44 340 1.13e-49 168
Msa1302630 MtrunA17_Chr5g0412681 34.343 297 170 8 2 286 31 314 2.62e-49 167
Msa1302630 MtrunA17_Chr2g0296371 33.439 314 173 8 4 296 50 348 7.00e-49 167
Msa1302630 MtrunA17_Chr5g0423251 30.363 303 198 5 1 296 44 340 1.63e-48 166
Msa1302630 MtrunA17_Chr5g0420941 30.164 305 196 7 1 296 42 338 8.07e-48 164
Msa1302630 MtrunA17_Chr2g0314391 31.900 279 169 5 3 268 69 339 2.32e-47 163
Msa1302630 MtrunA17_Chr1g0184101 34.686 271 160 6 5 265 39 302 4.02e-47 161
Msa1302630 MtrunA17_Chr5g0423201 29.667 300 197 5 5 296 48 341 6.48e-47 161
Msa1302630 MtrunA17_Chr7g0239111 32.566 304 186 7 3 296 54 348 7.32e-47 161
Msa1302630 MtrunA17_Chr4g0064781 33.456 272 169 4 4 268 50 316 1.32e-46 160
Msa1302630 MtrunA17_Chr5g0420901 32.000 275 172 6 1 266 43 311 1.75e-46 160
Msa1302630 MtrunA17_Chr5g0412671 34.409 279 166 7 1 266 35 309 1.84e-46 160
Msa1302630 MtrunA17_Chr7g0239101 31.715 309 182 8 3 296 54 348 3.55e-46 159
Msa1302630 MtrunA17_Chr3g0145171 32.258 310 193 9 4 304 52 353 5.79e-46 159
Msa1302630 MtrunA17_Chr5g0423221 31.317 281 167 5 1 266 68 337 6.39e-46 159
Msa1302630 MtrunA17_Chr8g0370711 32.895 304 186 9 5 298 53 348 7.70e-46 159
Msa1302630 MtrunA17_Chr7g0220001 32.907 313 182 11 1 302 38 333 1.71e-45 157
Msa1302630 MtrunA17_Chr1g0184161 31.525 295 181 7 5 288 39 323 2.46e-45 157
Msa1302630 MtrunA17_Chr5g0412651 34.276 283 165 7 1 268 35 311 2.91e-45 157
Msa1302630 MtrunA17_Chr2g0311761 33.574 277 164 6 5 268 69 338 3.89e-45 157
Msa1302630 MtrunA17_Chr8g0336751 34.296 277 161 8 5 268 95 363 4.50e-45 157
Msa1302630 MtrunA17_Chr5g0421101 29.304 273 182 4 1 266 44 312 9.94e-45 155
Msa1302630 MtrunA17_Chr8g0375701 32.609 276 168 5 1 266 52 319 2.04e-44 155
Msa1302630 MtrunA17_Chr2g0311921 33.852 257 155 6 5 252 55 305 2.05e-44 155
Msa1302630 MtrunA17_Chr2g0311681 31.646 316 183 12 4 298 63 366 2.26e-44 155
Msa1302630 MtrunA17_Chr7g0239121 31.148 305 190 8 3 296 50 345 3.99e-44 154
Msa1302630 MtrunA17_Chr5g0398291 33.692 279 171 5 3 268 46 323 4.70e-44 154
Msa1302630 MtrunA17_Chr1g0187831 30.068 296 187 9 5 288 71 358 4.74e-44 155
Msa1302630 MtrunA17_Chr5g0426891 30.612 294 191 8 2 287 37 325 5.99e-44 153
Msa1302630 MtrunA17_Chr7g0220011 31.544 298 181 10 2 288 37 322 6.81e-44 153
Msa1302630 MtrunA17_Chr8g0336851 31.907 257 160 5 5 252 61 311 1.19e-43 153
Msa1302630 MtrunA17_Chr1g0187811 32.482 274 170 8 5 269 189 456 1.21e-43 156
Msa1302630 MtrunA17_Chr4g0066121 34.221 263 155 7 4 255 60 315 1.95e-43 152
Msa1302630 MtrunA17_Chr5g0421091 27.575 301 206 6 3 296 44 339 1.99e-43 152
Msa1302630 MtrunA17_Chr8g0375681 32.714 269 167 6 36 296 15 277 2.01e-43 150
Msa1302630 MtrunA17_Chr2g0311831 33.673 294 172 10 5 285 69 352 2.77e-43 152
Msa1302630 MtrunA17_Chr8g0348081 31.939 263 160 6 4 255 60 314 3.23e-43 152
Msa1302630 MtrunA17_Chr2g0319491 32.414 290 172 9 3 284 32 305 3.39e-43 151
Msa1302630 MtrunA17_Chr1g0167911 33.225 307 187 8 5 301 55 353 3.75e-43 151
Msa1302630 MtrunA17_Chr1g0179801 30.903 288 160 7 3 266 65 337 7.28e-43 151
Msa1302630 MtrunA17_Chr1g0162361 34.028 288 163 8 1 268 24 304 9.45e-43 150
Msa1302630 MtrunA17_Chr1g0184121 32.727 275 167 7 5 268 38 305 1.03e-42 150
Msa1302630 MtrunA17_Chr1g0184111 30.169 295 186 8 5 288 38 323 3.80e-42 149
Msa1302630 MtrunA17_Chr2g0311691 31.013 316 185 12 4 298 63 366 5.03e-42 149
Msa1302630 MtrunA17_Chr7g0239821 29.467 319 203 7 3 310 63 370 5.08e-42 149
Msa1302630 MtrunA17_Chr6g0455481 32.143 308 187 8 6 303 41 336 9.05e-42 147
Msa1302630 MtrunA17_Chr2g0311861 34.932 292 159 12 4 288 64 331 9.53e-42 147
Msa1302630 MtrunA17_Chr2g0311711 32.246 276 169 7 5 268 68 337 1.53e-41 147
Msa1302630 MtrunA17_Chr4g0050031 32.095 296 185 7 2 287 60 349 2.43e-41 147
Msa1302630 MtrunA17_Chr2g0311701 30.421 309 178 10 5 293 70 361 2.97e-41 147
Msa1302630 MtrunA17_Chr8g0336761 32.090 268 149 6 5 254 61 313 3.25e-41 147
Msa1302630 MtrunA17_Chr1g0187821 31.408 277 169 9 5 268 68 336 3.36e-41 147
Msa1302630 MtrunA17_Chr8g0336781 31.538 260 164 5 4 254 95 349 4.37e-41 147
Msa1302630 MtrunA17_Chr1g0184151 32.491 277 164 8 5 268 39 305 6.78e-41 145
Msa1302630 MtrunA17_Chr8g0370721 32.609 276 172 8 3 268 51 322 8.52e-41 145
Msa1302630 MtrunA17_Chr8g0371931 32.593 270 167 7 3 261 38 303 9.00e-41 145
Msa1302630 MtrunA17_Chr5g0405411 33.456 272 162 9 3 261 38 303 9.48e-41 145
Msa1302630 MtrunA17_Chr3g0087031 31.879 298 186 9 5 293 61 350 1.04e-40 145
Msa1302630 MtrunA17_Chr2g0311741 30.824 279 170 7 3 268 26 294 1.95e-40 144
Msa1302630 MtrunA17_Chr7g0265221 28.966 290 173 5 3 268 66 346 2.48e-40 145
Msa1302630 MtrunA17_Chr8g0336861 31.818 264 156 8 5 254 61 314 2.91e-40 144
Msa1302630 MtrunA17_Chr4g0045471 32.881 295 165 9 2 268 24 313 3.51e-40 144
Msa1302630 MtrunA17_Chr4g0045411 30.796 289 173 8 2 268 28 311 8.12e-40 142
Msa1302630 MtrunA17_Chr8g0371921 31.481 270 170 7 3 261 38 303 1.83e-39 142
Msa1302630 MtrunA17_Chr5g0423211 27.036 307 205 8 1 296 44 342 2.00e-39 142
Msa1302630 MtrunA17_Chr7g0266651 33.208 265 147 9 4 252 59 309 2.17e-39 142
Msa1302630 MtrunA17_Chr1g0162351 30.088 339 194 11 2 312 67 390 2.82e-39 142
Msa1302630 MtrunA17_Chr4g0045441 31.338 284 171 7 5 268 33 312 3.52e-39 141
Msa1302630 MtrunA17_Chr7g0239071 31.560 282 179 5 23 296 18 293 3.59e-39 140
Msa1302630 MtrunA17_Chr1g0167951 33.594 256 155 6 5 252 54 302 4.87e-39 140
Msa1302630 MtrunA17_Chr6g0474391 30.169 295 181 8 5 281 65 352 5.01e-39 141
Msa1302630 MtrunA17_Chr8g0336631 32.197 264 155 8 5 254 61 314 8.35e-39 140
Msa1302630 MtrunA17_Chr1g0167961 33.721 258 155 7 4 252 69 319 1.33e-38 140
Msa1302630 MtrunA17_Chr5g0420721 31.950 241 156 4 58 296 8 242 1.42e-38 137
Msa1302630 MtrunA17_Chr3g0145181 28.881 277 178 7 6 268 51 322 1.48e-38 139
Msa1302630 MtrunA17_Chr2g0332191 30.657 274 169 7 5 266 53 317 1.52e-38 140
Msa1302630 MtrunA17_Chr1g0162321 29.794 339 195 11 2 312 67 390 2.47e-38 140
Msa1302630 MtrunA17_Chr4g0045451 31.250 288 168 8 5 266 27 310 7.96e-38 137
Msa1302630 MtrunA17_Chr8g0354261 32.374 278 166 9 4 266 68 338 1.20e-37 137
Msa1302630 MtrunA17_Chr3g0126741 31.884 276 169 7 3 266 58 326 1.52e-37 137
Msa1302630 MtrunA17_Chr7g0250511 30.769 299 179 9 4 287 49 334 1.65e-37 136
Msa1302630 MtrunA17_Chr8g0354241 32.971 276 165 7 5 266 69 338 1.69e-37 137
Msa1302630 MtrunA17_Chr7g0235951 28.188 298 192 9 5 288 68 357 2.34e-37 137
Msa1302630 MtrunA17_Chr5g0424201 32.877 292 176 9 5 285 45 327 2.80e-37 135
Msa1302630 MtrunA17_Chr7g0232161 33.471 242 146 5 3 235 59 294 3.03e-37 135
Msa1302630 MtrunA17_Chr3g0105281 30.370 270 163 5 2 259 32 288 8.73e-37 134
Msa1302630 MtrunA17_Chr8g0364471 27.425 299 193 9 5 288 68 357 8.86e-37 135
Msa1302630 MtrunA17_Chr3g0114861 31.295 278 173 6 24 287 56 329 2.97e-36 132
Msa1302630 MtrunA17_Chr3g0102041 31.579 247 156 6 24 261 61 303 8.54e-36 132
Msa1302630 MtrunA17_Chr3g0145201 28.881 277 178 7 6 268 686 957 9.31e-36 137
Msa1302630 MtrunA17_Chr5g0424211 31.769 277 169 7 5 268 43 312 1.26e-35 131
Msa1302630 MtrunA17_Chr3g0125421 30.921 304 179 12 5 287 37 330 2.48e-35 131
Msa1302630 MtrunA17_Chr3g0092531 29.520 271 182 6 20 287 26 290 4.08e-35 129
Msa1302630 MtrunA17_Chr7g0225881 31.923 260 153 9 5 252 68 315 5.27e-35 130
Msa1302630 MtrunA17_Chr8g0384481 28.571 280 180 9 3 267 58 332 6.59e-35 130
Msa1302630 MtrunA17_Chr2g0314371 28.674 279 162 7 3 250 51 323 8.97e-35 129
Msa1302630 MtrunA17_Chr3g0130391 28.041 296 190 9 3 281 65 354 1.01e-34 130
Msa1302630 MtrunA17_Chr2g0285931 29.470 302 186 11 1 286 25 315 1.24e-34 129
Msa1302630 MtrunA17_Chr8g0384461 28.094 299 192 10 5 287 48 339 2.22e-34 128
Msa1302630 MtrunA17_Chr4g0055591 28.571 259 160 7 4 251 61 305 2.87e-34 128
Msa1302630 MtrunA17_Chr8g0335411 33.094 278 164 10 5 269 68 336 3.27e-34 128
Msa1302630 MtrunA17_Chr6g0472861 30.916 262 155 9 4 251 70 319 3.84e-34 128
Msa1302630 MtrunA17_Chr1g0167931 31.873 251 130 6 4 252 54 265 4.09e-34 127
Msa1302630 MtrunA17_Chr1g0161041 32.841 271 142 9 5 255 97 347 5.43e-34 128
Msa1302630 MtrunA17_Chr7g0247991 31.786 280 167 11 5 268 68 339 5.60e-34 127
Msa1302630 MtrunA17_Chr1g0184241 30.303 264 170 5 5 261 70 326 9.07e-34 127
Msa1302630 MtrunA17_Chr8g0351101 26.498 317 210 10 3 303 53 362 1.28e-33 127
Msa1302630 MtrunA17_Chr1g0204181 26.578 301 184 7 5 281 60 347 3.02e-33 125
Msa1302630 MtrunA17_Chr1g0148771 28.839 267 174 7 5 264 64 321 4.78e-33 125
Msa1302630 MtrunA17_Chr4g0066991 29.795 292 175 8 5 288 68 337 5.68e-33 124
Msa1302630 MtrunA17_Chr7g0265351 28.758 306 178 10 2 288 37 321 9.06e-33 124
Msa1302630 MtrunA17_Chr2g0311631 28.205 312 194 9 4 297 55 354 9.12e-33 124
Msa1302630 MtrunA17_Chr1g0191201 27.000 300 196 10 5 287 54 347 3.99e-32 122
Msa1302630 MtrunA17_Chr5g0394071 37.931 174 94 5 114 286 5 165 7.25e-32 117
Msa1302630 MtrunA17_Chr2g0313111 28.947 304 183 9 5 293 29 314 1.33e-31 120
Msa1302630 MtrunA17_Chr1g0161111 32.353 272 146 9 3 255 131 383 3.80e-31 121
Msa1302630 MtrunA17_Chr7g0236011 29.373 303 182 10 5 288 68 357 4.09e-31 120
Msa1302630 MtrunA17_Chr4g0045431 27.778 270 171 7 19 268 47 312 1.09e-30 118
Msa1302630 MtrunA17_Chr7g0239091 26.230 305 213 7 4 307 160 453 1.48e-30 120
Msa1302630 MtrunA17_Chr3g0093751 28.239 301 186 8 2 288 54 338 1.93e-30 117
Msa1302630 MtrunA17_Chr3g0093741 28.852 305 179 11 2 288 54 338 1.93e-30 117
Msa1302630 MtrunA17_Chr1g0161081 29.412 306 175 11 3 288 72 356 2.05e-30 118
Msa1302630 MtrunA17_Chr8g0358941 28.076 317 201 10 5 304 28 334 3.52e-30 117
Msa1302630 MtrunA17_Chr7g0235981 32.114 246 146 8 35 269 55 290 8.79e-30 115
Msa1302630 MtrunA17_Chr4g0011311 28.814 236 144 7 1 223 64 288 1.99e-29 114
Msa1302630 MtrunA17_Chr3g0114871 34.568 243 140 9 5 238 43 275 2.01e-29 113
Msa1302630 MtrunA17_Chr3g0093761 28.239 301 185 10 2 288 54 337 2.06e-29 115
Msa1302630 MtrunA17_Chr5g0420881 36.765 136 84 1 162 297 4 137 2.08e-29 109
Msa1302630 MtrunA17_Chr8g0348951 29.677 310 173 12 4 287 5 295 2.17e-29 114
Msa1302630 MtrunA17_Chr4g0045461 29.682 283 176 6 5 268 33 311 1.39e-28 113
Msa1302630 MtrunA17_Chr4g0064771 32.386 176 111 2 104 279 19 186 1.52e-28 109
Msa1302630 MtrunA17_Chr3g0126761 34.911 169 108 2 100 268 33 199 3.55e-27 106
Msa1302630 MtrunA17_Chr4g0068891 27.907 301 196 8 4 293 20 310 4.09e-27 108
Msa1302630 MtrunA17_Chr7g0233661 43.182 132 70 3 158 287 20 148 4.43e-27 103
Msa1302630 MtrunA17_Chr7g0247741 29.966 297 181 12 5 287 12 295 6.55e-26 105
Msa1302630 MtrunA17_Chr1g0158011 34.518 197 114 7 97 290 63 247 1.85e-25 102
Msa1302630 MtrunA17_Chr5g0407781 26.073 303 202 9 2 297 3 290 4.22e-25 102
Msa1302630 MtrunA17_Chr1g0194321 27.358 318 188 12 4 293 20 322 4.23e-25 103
Msa1302630 MtrunA17_Chr8g0336801 43.617 94 52 1 162 255 14 106 1.17e-24 97.4
Msa1302630 MtrunA17_Chr4g0037611 36.196 163 91 5 123 284 3 153 5.01e-24 96.7
Msa1302630 MtrunA17_Chr6g0486831 27.760 317 183 11 3 285 17 321 6.64e-24 99.8
Msa1302630 MtrunA17_Chr4g0052251 26.449 276 185 8 23 284 42 313 6.78e-23 97.1
Msa1302630 MtrunA17_Chr1g0170631 31.868 182 113 5 111 289 3 176 7.00e-23 94.0
Msa1302630 MtrunA17_Chr8g0389941 29.225 284 160 12 6 259 36 308 1.21e-22 96.7
Msa1302630 MtrunA17_Chr8g0362741 27.350 234 135 7 1 223 64 273 1.54e-22 95.1
Msa1302630 MtrunA17_Chr4g0055911 28.049 328 186 12 4 296 9 321 2.52e-22 95.1
Msa1302630 MtrunA17_Chr4g0053251 27.092 251 165 7 27 261 41 289 4.88e-22 94.4
Msa1302630 MtrunA17_Chr8g0336871 38.931 131 70 3 124 254 3 123 3.03e-21 89.0
Msa1302630 MtrunA17_Chr2g0319521 34.783 115 71 2 109 223 14 124 3.53e-21 87.8
Msa1302630 MtrunA17_Chr3g0092581 29.341 167 113 4 121 287 1 162 5.48e-21 88.6
Msa1302630 MtrunA17_Chr4g0004071 27.046 281 182 7 2 268 7 278 2.41e-20 89.7
Msa1302630 MtrunA17_Chr4g0055871 27.536 276 156 10 11 259 13 271 2.31e-19 86.7
Msa1302630 MtrunA17_Chr4g0004061 26.690 281 182 8 3 268 8 279 2.53e-19 86.7
Msa1302630 MtrunA17_Chr5g0407731 24.915 293 192 10 5 287 34 308 1.76e-18 84.7
Msa1302630 MtrunA17_Chr1g0158031 33.962 159 95 6 121 275 1 153 5.98e-18 80.1
Msa1302630 MtrunA17_Chr1g0158021 28.829 222 143 8 2 215 47 261 1.87e-17 80.5
Msa1302630 MtrunA17_Chr8g0364171 33.913 115 68 3 111 223 18 126 2.70e-17 77.4
Msa1302630 MtrunA17_Chr2g0293931 29.319 191 119 6 110 293 13 194 6.03e-17 78.2
Msa1302630 MtrunA17_Chr8g0375581 45.312 64 35 0 156 219 22 85 1.01e-16 73.9
Msa1302630 MtrunA17_Chr1g0167921 34.862 109 67 2 114 222 52 156 7.00e-15 71.6
Msa1302630 MtrunA17_Chr4g0009561 27.273 220 136 7 95 294 93 308 7.84e-15 73.9
Msa1302630 MtrunA17_Chr8g0336831 26.738 187 124 5 5 182 61 243 1.79e-14 72.0
Msa1302630 MtrunA17_Chr3g0138351 26.519 181 127 5 110 288 125 301 6.54e-14 71.2
Msa1302630 MtrunA17_Chr1g0161101 41.053 95 45 3 162 255 409 493 7.27e-14 72.0
Msa1302630 MtrunA17_Chr2g0311611 43.478 69 31 2 162 223 4 71 7.77e-14 65.9
Msa1302630 MtrunA17_Chr7g0219991 36.190 105 63 1 114 218 251 351 2.71e-13 69.7
Msa1302630 MtrunA17_Chr8g0375661 33.981 103 60 2 3 97 51 153 5.43e-12 63.2
Msa1302630 MtrunA17_Chr8g0375641 34.615 104 58 3 3 97 51 153 6.49e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302630 AT1G05010.1 70.898 323 86 3 1 315 1 323 3.44e-173 483
Msa1302630 AT1G12010.1 71.895 306 82 1 3 308 6 307 9.39e-171 476
Msa1302630 AT1G62380.1 70.382 314 88 2 3 315 6 315 6.65e-169 472
Msa1302630 AT1G77330.1 52.077 313 130 6 5 306 4 307 9.25e-106 311
Msa1302630 AT2G19590.1 47.059 306 149 4 3 306 10 304 2.76e-105 310
Msa1302630 AT2G19590.2 48.000 275 130 4 34 306 26 289 9.71e-94 280
Msa1302630 AT5G24530.1 35.135 296 174 7 1 286 35 322 3.43e-58 191
Msa1302630 AT5G05600.1 36.486 296 163 8 5 284 63 349 7.43e-58 191
Msa1302630 AT2G38240.1 33.673 294 180 5 3 287 47 334 6.26e-56 185
Msa1302630 AT3G11180.1 35.739 291 170 6 4 284 95 378 3.05e-55 184
Msa1302630 AT3G11180.2 35.739 291 170 6 4 284 95 378 3.68e-55 184
Msa1302630 AT4G16330.2 36.700 297 164 9 3 286 66 351 6.79e-55 183
Msa1302630 AT1G78550.1 34.926 272 166 6 3 266 52 320 1.02e-53 179
Msa1302630 AT4G10490.1 32.781 302 192 5 2 296 40 337 1.24e-53 179
Msa1302630 AT3G55970.1 33.898 295 182 6 4 287 52 344 1.66e-53 179
Msa1302630 AT4G10500.1 33.103 290 182 6 2 284 42 326 3.58e-53 178
Msa1302630 AT1G17020.1 33.692 279 176 4 3 273 52 329 1.80e-50 171
Msa1302630 AT1G17010.1 33.091 275 174 4 1 267 51 323 9.21e-50 169
Msa1302630 AT4G25310.1 35.484 248 148 4 27 267 76 318 4.92e-47 162
Msa1302630 AT4G21200.1 36.226 265 152 8 3 259 41 296 1.46e-46 160
Msa1302630 AT1G06620.1 33.333 306 181 8 3 295 61 356 3.89e-46 160
Msa1302630 AT4G25300.1 31.868 273 176 4 3 267 51 321 3.99e-46 160
Msa1302630 AT1G78550.2 34.440 241 148 5 33 266 5 242 1.22e-45 156
Msa1302630 AT5G08640.2 32.877 292 176 7 4 284 43 325 1.37e-45 158
Msa1302630 AT5G08640.1 32.877 292 176 7 4 284 43 325 1.37e-45 158
Msa1302630 AT5G20400.1 30.744 309 189 7 4 298 45 342 2.53e-45 157
Msa1302630 AT3G21420.1 33.225 307 188 9 3 297 54 355 3.99e-44 154
Msa1302630 AT1G55290.1 31.544 298 181 9 2 288 60 345 1.52e-43 153
Msa1302630 AT5G59530.1 32.746 284 163 8 3 268 57 330 2.75e-43 152
Msa1302630 AT3G19010.1 34.965 286 161 7 2 266 26 307 2.91e-43 152
Msa1302630 AT3G19010.4 34.965 286 161 7 2 266 26 307 2.91e-43 152
Msa1302630 AT4G16330.1 40.976 205 114 5 84 286 46 245 6.69e-43 149
Msa1302630 AT5G43450.1 32.616 279 161 8 5 268 62 328 1.98e-42 150
Msa1302630 AT5G59540.1 32.333 300 176 10 3 282 60 352 3.89e-42 149
Msa1302630 AT1G49390.1 31.136 273 177 4 5 268 46 316 6.30e-42 148
Msa1302630 AT3G13610.1 31.104 299 181 9 2 288 60 345 6.43e-42 149
Msa1302630 AT4G22880.1 32.342 269 169 4 3 259 46 313 8.79e-42 148
Msa1302630 AT4G22880.2 32.342 269 169 4 3 259 46 313 8.79e-42 148
Msa1302630 AT4G22880.3 32.342 269 169 4 3 259 46 313 8.79e-42 148
Msa1302630 AT3G51240.1 33.210 271 166 7 2 261 36 302 1.94e-41 147
Msa1302630 AT1G03410.2 33.333 279 165 10 4 268 57 328 2.24e-41 147
Msa1302630 AT3G61400.1 36.434 258 145 9 6 252 69 318 3.72e-41 147
Msa1302630 AT1G03410.1 33.333 279 165 10 4 268 94 365 3.78e-41 147
Msa1302630 AT2G36690.2 30.961 281 164 7 3 266 60 327 6.09e-41 146
Msa1302630 AT2G36690.1 30.961 281 164 7 3 266 60 327 6.09e-41 146
Msa1302630 AT3G12900.1 30.820 305 183 10 7 297 59 349 9.35e-41 145
Msa1302630 AT5G20550.1 32.491 277 171 7 4 268 45 317 1.53e-40 145
Msa1302630 AT5G05600.2 35.169 236 130 7 4 223 62 290 1.56e-40 143
Msa1302630 AT5G54000.2 30.545 275 180 6 3 268 45 317 2.55e-40 144
Msa1302630 AT2G30830.1 33.696 276 163 9 13 279 66 330 5.28e-40 144
Msa1302630 AT1G06650.2 32.168 286 165 10 1 268 61 335 1.24e-39 143
Msa1302630 AT5G63595.1 33.091 275 151 9 2 266 23 274 2.87e-39 140
Msa1302630 AT3G19000.1 33.564 289 166 8 2 268 30 314 2.97e-39 141
Msa1302630 AT5G43440.1 31.752 274 172 7 5 268 63 331 2.99e-39 142
Msa1302630 AT3G55970.2 32.900 231 144 4 4 223 52 282 5.14e-39 139
Msa1302630 AT1G04350.1 34.420 276 161 11 5 268 59 326 6.05e-39 141
Msa1302630 AT1G80340.1 27.723 303 189 8 2 289 48 335 6.25e-39 140
Msa1302630 AT4G25420.1 29.236 301 187 9 5 287 62 354 6.82e-39 141
Msa1302630 AT1G49390.2 33.054 239 151 3 37 268 1 237 1.16e-38 138
Msa1302630 AT1G06640.1 30.693 303 189 9 1 290 61 355 2.41e-38 139
Msa1302630 AT2G30840.1 32.302 291 167 10 5 279 58 334 3.21e-38 139
Msa1302630 AT1G04380.1 31.757 296 178 10 5 288 46 329 3.34e-38 139
Msa1302630 AT5G63590.1 33.559 295 171 10 4 284 14 297 1.13e-37 136
Msa1302630 AT1G15550.1 28.333 300 191 8 2 289 55 342 1.39e-37 137
Msa1302630 AT5G54000.1 32.636 239 152 5 37 268 1 237 2.30e-37 134
Msa1302630 AT1G03400.1 34.375 256 149 8 4 252 56 299 1.67e-36 134
Msa1302630 AT3G19010.3 32.168 286 139 7 2 266 26 277 2.72e-36 133
Msa1302630 AT5G07200.1 27.243 301 197 5 5 287 59 355 5.53e-36 133
Msa1302630 AT1G60980.1 27.393 303 191 7 5 287 58 351 1.73e-35 132
Msa1302630 AT2G25450.1 31.541 279 172 9 5 270 56 328 2.30e-35 131
Msa1302630 AT1G80330.1 28.302 318 202 10 2 306 47 351 9.11e-35 130
Msa1302630 AT1G06645.1 30.961 281 172 8 1 268 74 345 1.05e-34 130
Msa1302630 AT2G30840.3 31.615 291 163 11 5 279 58 328 4.30e-34 128
Msa1302630 AT1G78440.1 29.054 296 182 11 5 284 19 302 5.34e-34 127
Msa1302630 AT5G51810.1 27.597 308 195 8 2 287 51 352 1.33e-33 127
Msa1302630 AT1G06620.2 33.333 231 136 6 3 223 61 283 1.52e-33 125
Msa1302630 AT5G43450.2 32.599 227 129 7 5 219 62 276 4.08e-33 124
Msa1302630 AT1G50960.1 28.295 258 173 5 3 253 39 291 4.49e-33 125
Msa1302630 AT5G63600.1 31.379 290 177 10 5 285 34 310 4.65e-33 124
Msa1302630 AT3G19010.2 34.146 246 137 7 2 226 26 267 9.59e-33 123
Msa1302630 AT3G61400.2 35.965 228 128 8 6 223 69 288 1.25e-32 122
Msa1302630 AT2G44800.1 28.383 303 193 11 4 293 52 343 2.20e-32 123
Msa1302630 AT3G19000.2 31.746 252 146 8 2 231 30 277 2.85e-32 121
Msa1302630 AT5G63600.2 31.615 291 176 11 5 285 34 311 3.20e-32 122
Msa1302630 AT4G25310.2 30.645 248 132 4 27 267 76 290 3.34e-32 122
Msa1302630 AT3G51240.2 38.122 181 104 4 85 261 42 218 4.93e-32 120
Msa1302630 AT3G60290.1 30.169 295 182 11 4 285 52 335 5.33e-32 122
Msa1302630 AT1G03400.2 31.802 283 146 9 5 252 57 327 5.50e-31 120
Msa1302630 AT4G25300.2 33.962 159 103 1 110 268 72 228 7.77e-31 117
Msa1302630 AT5G07480.1 28.428 299 187 11 5 285 45 334 1.17e-30 119
Msa1302630 AT1G30040.1 29.720 286 181 13 12 284 34 312 5.72e-30 116
Msa1302630 AT1G06640.2 29.832 238 152 6 1 229 61 292 1.09e-29 115
Msa1302630 AT1G06650.1 30.932 236 138 8 1 222 61 285 1.13e-29 115
Msa1302630 AT2G30840.2 31.579 228 140 6 5 222 58 279 4.16e-29 113
Msa1302630 AT1G06640.3 30.702 228 143 6 1 219 61 282 5.10e-29 113
Msa1302630 AT4G23340.1 30.882 272 170 10 27 287 30 294 1.52e-28 112
Msa1302630 AT5G59540.2 30.603 232 143 8 3 223 60 284 1.56e-28 111
Msa1302630 AT5G43440.2 30.631 222 142 6 5 219 63 279 2.14e-28 111
Msa1302630 AT3G47190.1 30.037 273 160 8 5 258 33 293 4.59e-28 111
Msa1302630 AT1G44090.1 27.000 300 198 8 4 287 63 357 6.05e-28 112
Msa1302630 AT1G04380.2 30.396 227 141 7 5 223 46 263 3.13e-27 107
Msa1302630 AT1G47990.1 25.974 308 202 10 2 294 13 309 9.00e-27 107
Msa1302630 AT3G50210.4 27.922 308 183 11 1 277 5 304 1.43e-26 107
Msa1302630 AT3G50210.1 27.922 308 183 11 1 277 5 304 1.43e-26 107
Msa1302630 AT3G50210.3 27.922 308 183 11 1 277 5 304 1.43e-26 107
Msa1302630 AT4G21690.1 25.574 305 194 11 4 289 47 337 3.19e-26 106
Msa1302630 AT5G43935.1 29.333 300 163 12 2 285 17 283 4.51e-26 105
Msa1302630 AT5G12270.1 28.296 311 190 10 5 297 57 352 9.63e-26 105
Msa1302630 AT2G34555.1 27.483 302 175 11 5 284 28 307 1.23e-25 104
Msa1302630 AT5G63580.2 31.224 237 131 8 4 223 19 240 4.97e-25 101
Msa1302630 AT5G63580.1 31.064 235 130 8 4 221 19 238 9.06e-25 100
Msa1302630 AT3G49620.1 26.403 303 185 10 4 278 34 326 1.57e-24 102
Msa1302630 AT5G51310.1 27.303 304 194 11 3 287 4 299 1.73e-24 101
Msa1302630 AT1G02400.1 28.391 317 202 14 4 306 24 329 2.75e-24 101
Msa1302630 AT5G07480.2 33.516 182 109 5 110 285 50 225 4.83e-24 98.6
Msa1302630 AT4G25420.2 28.692 237 145 8 5 223 62 292 1.59e-23 98.6
Msa1302630 AT3G49630.1 26.073 303 198 9 6 285 18 317 2.06e-23 98.6
Msa1302630 AT3G49630.3 26.073 303 198 9 6 285 14 313 2.34e-23 98.6
Msa1302630 AT5G51810.2 27.935 247 152 7 2 226 51 293 9.31e-22 93.6
Msa1302630 AT5G58660.1 24.390 287 177 7 4 259 34 311 1.59e-21 94.0
Msa1302630 AT1G14130.1 27.823 248 168 5 24 266 26 267 6.90e-21 91.3
Msa1302630 AT4G23340.2 32.044 181 111 7 114 287 1 176 3.81e-19 84.3
Msa1302630 AT1G14120.2 27.059 255 166 8 4 250 8 250 9.11e-19 85.5
Msa1302630 AT1G14120.1 27.059 255 166 8 4 250 8 250 9.11e-19 85.5
Msa1302630 AT1G14120.3 27.059 255 166 8 4 250 8 250 9.11e-19 85.5
Msa1302630 AT1G35190.1 27.458 295 170 9 1 259 1 287 3.06e-18 84.3
Msa1302630 AT1G35190.2 25.545 321 170 11 1 285 1 288 4.91e-18 83.2
Msa1302630 AT3G46490.1 25.839 298 153 10 6 259 19 292 1.29e-17 82.4
Msa1302630 AT3G50210.2 30.000 190 116 5 98 277 40 222 3.54e-17 80.1
Msa1302630 AT3G49630.2 27.919 197 133 5 97 285 49 244 5.01e-17 79.7
Msa1302630 AT1G52820.1 25.263 285 180 9 3 268 11 281 9.87e-16 77.0
Msa1302630 AT3G46500.7 25.368 272 178 9 1 253 14 279 1.30e-15 76.3
Msa1302630 AT3G46490.2 25.087 287 147 10 6 248 19 281 2.21e-14 72.8
Msa1302630 AT4G22870.1 42.647 68 39 0 192 259 2 69 6.51e-14 67.4
Msa1302630 AT4G16765.6 27.660 188 116 7 110 286 59 237 3.60e-13 68.6
Msa1302630 AT4G16765.1 27.660 188 116 7 110 286 59 237 3.60e-13 68.6
Msa1302630 AT4G16765.2 27.660 188 116 7 110 286 59 237 3.60e-13 68.6
Msa1302630 AT4G03070.1 25.641 312 186 14 3 288 13 304 4.33e-13 69.3
Msa1302630 AT4G16765.5 32.773 119 71 4 173 286 77 191 2.65e-12 65.5
Msa1302630 AT4G16765.3 28.916 166 108 6 110 268 59 221 3.44e-12 65.5
Msa1302630 AT3G46480.1 39.362 94 50 3 171 259 154 245 5.34e-12 65.9
Msa1302630 AT1G02400.2 26.496 234 156 10 4 226 24 252 5.61e-12 65.5

Find 88 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAAGATGCTTGTGAAAAT+TGG 0.134705 8_3:-65212474 Msa1302630:CDS
CAATCCATTGGCCATCTTTA+AGG 0.155824 8_3:+65211394 None:intergenic
GGATCCAAGGGACCAAATTT+TGG 0.175226 8_3:-65211540 Msa1302630:CDS
CTAAGGTTTCTGAATGCTTT+TGG 0.208927 8_3:-65210829 Msa1302630:three_prime_UTR
CTAACTTTGGTTCCAAAATT+TGG 0.232333 8_3:+65211528 None:intergenic
AGCTTCAAATCTTGGCTCTT+TGG 0.245143 8_3:+65210940 None:intergenic
AAAAGATGCTTGTGAAAATT+GGG 0.255457 8_3:-65212473 Msa1302630:CDS
ATTAGTACTATACCTCAATT+TGG 0.306583 8_3:+65211328 None:intergenic
GACTTGCTGTGTGAGAATCT+TGG 0.323307 8_3:-65211597 Msa1302630:CDS
AACTTTGTCCATCAACTCTA+TGG 0.333621 8_3:+65212066 None:intergenic
GCCTTCATAGCTTCAAATCT+TGG 0.334798 8_3:+65210932 None:intergenic
GGTTCCAAAATTTGGTCCCT+TGG 0.349046 8_3:+65211536 None:intergenic
TGCAGTGGAACTTGAGAAAC+TGG 0.361619 8_3:-65211634 Msa1302630:CDS
CAAATCTTGGCTCTTTGGCT+TGG 0.362611 8_3:+65210945 None:intergenic
GCTCTTTGGCTTGGAATTTG+AGG 0.371223 8_3:+65210954 None:intergenic
GTCCACCAACCTTGTCATCT+TGG 0.380130 8_3:+65211424 None:intergenic
ACTTGCTGTGTGAGAATCTT+GGG 0.390042 8_3:-65211596 Msa1302630:CDS
TGAAAATTGGGGTTTCTTTG+AGG 0.399932 8_3:-65212461 Msa1302630:intron
CTGAGTCCTTTGATAAGATC+TGG 0.404368 8_3:+65211483 None:intergenic
CAGAAATCAATGACTTGGAT+TGG 0.409232 8_3:-65211955 Msa1302630:CDS
TATTTGAAGAAAGTCTTTCA+TGG 0.410538 8_3:-65211561 Msa1302630:CDS
TGGGATATCCATAGAGTTGA+TGG 0.415130 8_3:-65212074 Msa1302630:CDS
ACATGCTTAGGCAGTTGGTA+TGG 0.424335 8_3:+65210892 None:intergenic
TCATCACATGCTTAGGCAGT+TGG 0.430982 8_3:+65210887 None:intergenic
GGAGCAAAGGTTCAAAGAAA+TGG 0.439953 8_3:-65212008 Msa1302630:CDS
AGATTCTTCATGTCAACTAC+TGG 0.442836 8_3:+65212532 None:intergenic
GGCAGTTGGTATGGGAATGT+TGG 0.451851 8_3:+65210901 None:intergenic
ATCTCTGATATGTTAGAGTT+AGG 0.452914 8_3:+65211905 None:intergenic
CACACTCTTGTATTTGCCAT+TGG 0.461320 8_3:+65211150 None:intergenic
AGAAATCAATGACTTGGATT+GGG 0.472666 8_3:-65211954 Msa1302630:CDS
AATCTCTCCTGCAGCAGCCT+TGG 0.474285 8_3:-65211050 Msa1302630:CDS
TATGGGAATGTTGGATTCCA+TGG 0.476603 8_3:+65210910 None:intergenic
TCCTTCACCAAGGCTGCTGC+AGG 0.479391 8_3:+65211043 None:intergenic
CATTCCATTGTTATCAACCT+TGG 0.482440 8_3:-65211354 Msa1302630:CDS
GAGAATCTTGGGCTAGAGAA+AGG 0.487980 8_3:-65211585 Msa1302630:CDS
AGGAGGGTAGTTGCTAACTT+TGG 0.492635 8_3:+65211515 None:intergenic
GAGATTACTGCATCATTGCC+TGG 0.493110 8_3:+65211067 None:intergenic
CAACCTTGGTGACCAAATTG+AGG 0.503779 8_3:-65211340 Msa1302630:intron
CTCAGAGCCCACACAGATGC+TGG 0.508251 8_3:-65211465 Msa1302630:CDS
CCTTTGATAAGATCTGGCTT+AGG 0.514259 8_3:+65211489 None:intergenic
GCCAAGATTTGAAGCTATGA+AGG 0.524377 8_3:-65210933 Msa1302630:CDS
TTAAAACAGGTGATTACCAA+TGG 0.524820 8_3:-65211166 Msa1302630:intron
AAAGATGCTTGTGAAAATTG+GGG 0.528531 8_3:-65212472 Msa1302630:CDS
CATGCTTAGGCAGTTGGTAT+GGG 0.532498 8_3:+65210893 None:intergenic
TTGATCTTGATCATGACTAC+AGG 0.534190 8_3:-65211880 Msa1302630:intron
TTCCAAGATGACAAGGTTGG+TGG 0.537071 8_3:-65211426 Msa1302630:CDS
CTATTCCAAGATGACAAGGT+TGG 0.537341 8_3:-65211429 Msa1302630:CDS
TGTAGTCATGATCAAGATCA+AGG 0.541430 8_3:+65211882 None:intergenic
TCCTGCAGCAGCCTTGGTGA+AGG 0.544976 8_3:-65211044 Msa1302630:CDS
CTGATATGTTAGAGTTAGGA+AGG 0.547684 8_3:+65211909 None:intergenic
AGCTCCTTAAAGATGGCCAA+TGG 0.550067 8_3:-65211398 Msa1302630:CDS
ATTTGAAGCTATGAAGGCCA+TGG 0.550162 8_3:-65210927 Msa1302630:CDS
GAAAGTCTTTCATGGATCCA+AGG 0.558321 8_3:-65211553 Msa1302630:CDS
TCAGTCAGAAATCAATGACT+TGG 0.558442 8_3:-65211960 Msa1302630:CDS
GATTACATGAAACTCTATGC+TGG 0.558834 8_3:-65210977 Msa1302630:CDS
TGGATTATAAAATGATGCTA+TGG 0.559145 8_3:+65211087 None:intergenic
GAATCTTAACACTGAAGAGA+AGG 0.559570 8_3:-65212515 Msa1302630:CDS
CTTCTGTTTGAGCAATTACA+CGG 0.563408 8_3:+65211122 None:intergenic
GGACTTCAGCTCCTTAAAGA+TGG 0.565268 8_3:-65211405 Msa1302630:CDS
ATAAGATCTGGCTTAGGACA+AGG 0.565790 8_3:+65211495 None:intergenic
AAAGAAATGGTAGCAAGCAA+AGG 0.566022 8_3:-65211995 Msa1302630:CDS
GTCACCAAGGTTGATAACAA+TGG 0.568643 8_3:+65211350 None:intergenic
TTGGTGGGACATCAATCCAT+TGG 0.570294 8_3:+65211382 None:intergenic
CGTGTAATTGCTCAAACAGA+AGG 0.571834 8_3:-65211121 Msa1302630:CDS
ACAATGGAATGACGCATTGG+TGG 0.574276 8_3:+65211366 None:intergenic
AGAATCTTGGGCTAGAGAAA+GGG 0.575627 8_3:-65211584 Msa1302630:CDS
AGAAAACTACAAGAAGCGTA+TGG 0.577170 8_3:-65212029 Msa1302630:CDS
ACAAGAAGCGTATGGAGCAA+AGG 0.585634 8_3:-65212021 Msa1302630:CDS
TTTATGCTACACATGCACAT+AGG 0.597145 8_3:+65210782 None:intergenic
CAATGGAATGACGCATTGGT+GGG 0.600451 8_3:+65211367 None:intergenic
CCTAAGCCAGATCTTATCAA+AGG 0.602471 8_3:-65211489 Msa1302630:CDS
AAAGTCTTTCATGGATCCAA+GGG 0.606069 8_3:-65211552 Msa1302630:CDS
TGATGAAGTTGGTGAACCAT+GGG 0.610190 8_3:-65212093 Msa1302630:intron
TTGATGAAGTTGGTGAACCA+TGG 0.611805 8_3:-65212094 Msa1302630:intron
GGCAATGAAGGAATTTGCAG+TGG 0.619899 8_3:-65211649 Msa1302630:CDS
TGAAGAGAAGGCATCAACCA+TGG 0.624686 8_3:-65212503 Msa1302630:CDS
ATAACAATGGAATGACGCAT+TGG 0.625745 8_3:+65211363 None:intergenic
GTGTAATTGCTCAAACAGAA+GGG 0.628227 8_3:-65211120 Msa1302630:CDS
TTTACTATTCCAAGATGACA+AGG 0.632555 8_3:-65211433 Msa1302630:CDS
CACATCTAATTCCTTCACCA+AGG 0.639481 8_3:+65211033 None:intergenic
TCAACTCTATGGATATCCCA+TGG 0.641514 8_3:+65212077 None:intergenic
TATGCCACCAGCATCTGTGT+GGG 0.645103 8_3:+65211458 None:intergenic
TTATGCCACCAGCATCTGTG+TGG 0.659371 8_3:+65211457 None:intergenic
ATACCTCAATTTGGTCACCA+AGG 0.670046 8_3:+65211337 None:intergenic
AGATCTGGCTTAGGACAAGG+AGG 0.670854 8_3:+65211498 None:intergenic
AGAGCCCACACAGATGCTGG+TGG 0.706268 8_3:-65211462 Msa1302630:CDS
ATATGTTAGAGTTAGGAAGG+TGG 0.716594 8_3:+65211912 None:intergenic
GATCTGGCTTAGGACAAGGA+GGG 0.742716 8_3:+65211499 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAAAACATTACTAAT+TGG + chr8_3:65210924-65210943 None:intergenic 10.0%
!!! AGTAATGTTTTTATTATTAT+AGG - chr8_3:65210927-65210946 Msa1302630:CDS 10.0%
!!! TTTTTTGTGTTATTAATTTT+AGG - chr8_3:65211611-65211630 Msa1302630:CDS 10.0%
!! ATAATAAAAACATTACTAAT+TGG + chr8_3:65210924-65210943 None:intergenic 10.0%
!!! AGTAATGTTTTTATTATTAT+AGG - chr8_3:65210927-65210946 Msa1302630:CDS 10.0%
!!! TTTTTTGTGTTATTAATTTT+AGG - chr8_3:65211611-65211630 Msa1302630:CDS 10.0%
!!! TTTTTTATGAGATTTATTTG+AGG - chr8_3:65210853-65210872 Msa1302630:three_prime_UTR 15.0%
!!! TGTATATATTTTTTTGTGTT+TGG - chr8_3:65211580-65211599 Msa1302630:CDS 15.0%
!! ATATAATACTTTGTTAAAAC+AGG - chr8_3:65212106-65212125 Msa1302630:intron 15.0%
!!! AATCATCAAAAACAAATTTT+GGG + chr8_3:65212292-65212311 None:intergenic 15.0%
!!! TAATCATCAAAAACAAATTT+TGG + chr8_3:65212293-65212312 None:intergenic 15.0%
!!! TTAATTTTGTTTATTTGCTA+AGG - chr8_3:65212439-65212458 Msa1302630:intron 15.0%
!!! TTTTTTATGAGATTTATTTG+AGG - chr8_3:65210853-65210872 Msa1302630:three_prime_UTR 15.0%
!!! TGTATATATTTTTTTGTGTT+TGG - chr8_3:65211580-65211599 Msa1302630:CDS 15.0%
!! ATATAATACTTTGTTAAAAC+AGG - chr8_3:65212106-65212125 Msa1302630:intron 15.0%
!!! AATCATCAAAAACAAATTTT+GGG + chr8_3:65212292-65212311 None:intergenic 15.0%
!!! TAATCATCAAAAACAAATTT+TGG + chr8_3:65212293-65212312 None:intergenic 15.0%
!!! TTAATTTTGTTTATTTGCTA+AGG - chr8_3:65212439-65212458 Msa1302630:intron 15.0%
!!! GTTTATTTGTTTCTTATTTG+TGG - chr8_3:65211152-65211171 Msa1302630:CDS 20.0%
!!! AAATCGCATTTTAAAATAAG+AGG + chr8_3:65211463-65211482 None:intergenic 20.0%
!! AAATATATACACATAGATCA+TGG + chr8_3:65211571-65211590 None:intergenic 20.0%
!!! TTGTGTTATTAATTTTAGGA+AGG - chr8_3:65211615-65211634 Msa1302630:CDS 20.0%
!!! GTTTATTTGTTTCTTATTTG+TGG - chr8_3:65211152-65211171 Msa1302630:CDS 20.0%
!!! AAATCGCATTTTAAAATAAG+AGG + chr8_3:65211463-65211482 None:intergenic 20.0%
!! AAATATATACACATAGATCA+TGG + chr8_3:65211571-65211590 None:intergenic 20.0%
!!! TTGTGTTATTAATTTTAGGA+AGG - chr8_3:65211615-65211634 Msa1302630:CDS 20.0%
! TAAAAGATGCTTGTGAAAAT+TGG - chr8_3:65210811-65210830 Msa1302630:three_prime_UTR 25.0%
! AAAAGATGCTTGTGAAAATT+GGG - chr8_3:65210812-65210831 Msa1302630:three_prime_UTR 25.0%
!!! TTGAATGAGTTTTAAGTAGA+AGG + chr8_3:65211003-65211022 None:intergenic 25.0%
! TTACGATATGATATCTATTG+TGG - chr8_3:65211525-65211544 Msa1302630:CDS 25.0%
! TATTTGAAGAAAGTCTTTCA+TGG - chr8_3:65211724-65211743 Msa1302630:intron 25.0%
! ATTAGTACTATACCTCAATT+TGG + chr8_3:65211960-65211979 None:intergenic 25.0%
!! TAATCAAAGGGTATAACTAT+AGG - chr8_3:65211976-65211995 Msa1302630:CDS 25.0%
! CCTCAAAATTCGTAATATTA+CGG - chr8_3:65212032-65212051 Msa1302630:CDS 25.0%
! TGGATTATAAAATGATGCTA+TGG + chr8_3:65212201-65212220 None:intergenic 25.0%
!! ATAGCATCATTTTATAATCC+AGG - chr8_3:65212200-65212219 Msa1302630:intron 25.0%
!!! AAACAAATTTTGGGTAAACT+TGG + chr8_3:65212283-65212302 None:intergenic 25.0%
! TAAAAGATGCTTGTGAAAAT+TGG - chr8_3:65210811-65210830 Msa1302630:three_prime_UTR 25.0%
! AAAAGATGCTTGTGAAAATT+GGG - chr8_3:65210812-65210831 Msa1302630:three_prime_UTR 25.0%
!!! TTGAATGAGTTTTAAGTAGA+AGG + chr8_3:65211003-65211022 None:intergenic 25.0%
! TTACGATATGATATCTATTG+TGG - chr8_3:65211525-65211544 Msa1302630:CDS 25.0%
! TATTTGAAGAAAGTCTTTCA+TGG - chr8_3:65211724-65211743 Msa1302630:intron 25.0%
! ATTAGTACTATACCTCAATT+TGG + chr8_3:65211960-65211979 None:intergenic 25.0%
!! TAATCAAAGGGTATAACTAT+AGG - chr8_3:65211976-65211995 Msa1302630:CDS 25.0%
! CCTCAAAATTCGTAATATTA+CGG - chr8_3:65212032-65212051 Msa1302630:CDS 25.0%
! TGGATTATAAAATGATGCTA+TGG + chr8_3:65212201-65212220 None:intergenic 25.0%
!! ATAGCATCATTTTATAATCC+AGG - chr8_3:65212200-65212219 Msa1302630:intron 25.0%
!!! AAACAAATTTTGGGTAAACT+TGG + chr8_3:65212283-65212302 None:intergenic 25.0%
! AGCATCTTTTATAATCTCCA+TGG + chr8_3:65210802-65210821 None:intergenic 30.0%
AAAGATGCTTGTGAAAATTG+GGG - chr8_3:65210813-65210832 Msa1302630:three_prime_UTR 30.0%
!!! TTAGTTGTCATGCTAGTTTT+TGG - chr8_3:65210963-65210982 Msa1302630:CDS 30.0%
!!! TAGTTGTCATGCTAGTTTTT+GGG - chr8_3:65210964-65210983 Msa1302630:CDS 30.0%
GTACTACTAATTAGTATGTC+CGG + chr8_3:65211058-65211077 None:intergenic 30.0%
CAACTTCATCAAACAACATA+AGG + chr8_3:65211183-65211202 None:intergenic 30.0%
! CTTATGTTGTTTGATGAAGT+TGG - chr8_3:65211181-65211200 Msa1302630:intron 30.0%
! AGAAATCAATGACTTGGATT+GGG - chr8_3:65211331-65211350 Msa1302630:intron 30.0%
ATCTCTGATATGTTAGAGTT+AGG + chr8_3:65211383-65211402 None:intergenic 30.0%
GATTTGAACCTTCATATTGT+GGG - chr8_3:65211478-65211497 Msa1302630:CDS 30.0%
! TACATTTTCCCACAATATGA+AGG + chr8_3:65211489-65211508 None:intergenic 30.0%
!! TAATTTTAGGAAGGCAATGA+AGG - chr8_3:65211624-65211643 Msa1302630:CDS 30.0%
! CTAACTTTGGTTCCAAAATT+TGG + chr8_3:65211760-65211779 None:intergenic 30.0%
TTTACTATTCCAAGATGACA+AGG - chr8_3:65211852-65211871 Msa1302630:intron 30.0%
TGAGGTATAGTACTAATCAA+AGG - chr8_3:65211963-65211982 Msa1302630:CDS 30.0%
GAGGTATAGTACTAATCAAA+GGG - chr8_3:65211964-65211983 Msa1302630:CDS 30.0%
! CCGTAATATTACGAATTTTG+AGG + chr8_3:65212035-65212054 None:intergenic 30.0%
TTAAAACAGGTGATTACCAA+TGG - chr8_3:65212119-65212138 Msa1302630:intron 30.0%
! AATTTTCTCATCACATGCTT+AGG + chr8_3:65212408-65212427 None:intergenic 30.0%
! AGCATCTTTTATAATCTCCA+TGG + chr8_3:65210802-65210821 None:intergenic 30.0%
AAAGATGCTTGTGAAAATTG+GGG - chr8_3:65210813-65210832 Msa1302630:three_prime_UTR 30.0%
!!! TTAGTTGTCATGCTAGTTTT+TGG - chr8_3:65210963-65210982 Msa1302630:CDS 30.0%
!!! TAGTTGTCATGCTAGTTTTT+GGG - chr8_3:65210964-65210983 Msa1302630:CDS 30.0%
GTACTACTAATTAGTATGTC+CGG + chr8_3:65211058-65211077 None:intergenic 30.0%
CAACTTCATCAAACAACATA+AGG + chr8_3:65211183-65211202 None:intergenic 30.0%
! CTTATGTTGTTTGATGAAGT+TGG - chr8_3:65211181-65211200 Msa1302630:intron 30.0%
! AGAAATCAATGACTTGGATT+GGG - chr8_3:65211331-65211350 Msa1302630:intron 30.0%
ATCTCTGATATGTTAGAGTT+AGG + chr8_3:65211383-65211402 None:intergenic 30.0%
GATTTGAACCTTCATATTGT+GGG - chr8_3:65211478-65211497 Msa1302630:CDS 30.0%
! TACATTTTCCCACAATATGA+AGG + chr8_3:65211489-65211508 None:intergenic 30.0%
!! TAATTTTAGGAAGGCAATGA+AGG - chr8_3:65211624-65211643 Msa1302630:CDS 30.0%
! CTAACTTTGGTTCCAAAATT+TGG + chr8_3:65211760-65211779 None:intergenic 30.0%
TTTACTATTCCAAGATGACA+AGG - chr8_3:65211852-65211871 Msa1302630:intron 30.0%
TGAGGTATAGTACTAATCAA+AGG - chr8_3:65211963-65211982 Msa1302630:CDS 30.0%
GAGGTATAGTACTAATCAAA+GGG - chr8_3:65211964-65211983 Msa1302630:CDS 30.0%
! CCGTAATATTACGAATTTTG+AGG + chr8_3:65212035-65212054 None:intergenic 30.0%
TTAAAACAGGTGATTACCAA+TGG - chr8_3:65212119-65212138 Msa1302630:intron 30.0%
! AATTTTCTCATCACATGCTT+AGG + chr8_3:65212408-65212427 None:intergenic 30.0%
AGATTCTTCATGTCAACTAC+TGG + chr8_3:65210756-65210775 None:intergenic 35.0%
GAATCTTAACACTGAAGAGA+AGG - chr8_3:65210770-65210789 Msa1302630:three_prime_UTR 35.0%
TGAAAATTGGGGTTTCTTTG+AGG - chr8_3:65210824-65210843 Msa1302630:three_prime_UTR 35.0%
AATTGGTATGCATATATCCG+TGG + chr8_3:65210907-65210926 None:intergenic 35.0%
!!! AGTTTTAAGTAGAAGGTTGC+AGG + chr8_3:65210996-65211015 None:intergenic 35.0%
TACACAACATGAATATGCAG+GGG + chr8_3:65211114-65211133 None:intergenic 35.0%
GTACACAACATGAATATGCA+GGG + chr8_3:65211115-65211134 None:intergenic 35.0%
AGTACACAACATGAATATGC+AGG + chr8_3:65211116-65211135 None:intergenic 35.0%
TGTTGTGTACTTGTGTTTGA+AGG - chr8_3:65211125-65211144 Msa1302630:CDS 35.0%
AACTTTGTCCATCAACTCTA+TGG + chr8_3:65211222-65211241 None:intergenic 35.0%
! AGAAAACTACAAGAAGCGTA+TGG - chr8_3:65211256-65211275 Msa1302630:intron 35.0%
AAAGAAATGGTAGCAAGCAA+AGG - chr8_3:65211290-65211309 Msa1302630:intron 35.0%
TCAGTCAGAAATCAATGACT+TGG - chr8_3:65211325-65211344 Msa1302630:intron 35.0%
! CAGAAATCAATGACTTGGAT+TGG - chr8_3:65211330-65211349 Msa1302630:intron 35.0%
ATATGTTAGAGTTAGGAAGG+TGG + chr8_3:65211376-65211395 None:intergenic 35.0%
CTGATATGTTAGAGTTAGGA+AGG + chr8_3:65211379-65211398 None:intergenic 35.0%
TGTAGTCATGATCAAGATCA+AGG + chr8_3:65211406-65211425 None:intergenic 35.0%
TTGATCTTGATCATGACTAC+AGG - chr8_3:65211405-65211424 Msa1302630:CDS 35.0%
CGATTTGAACCTTCATATTG+TGG - chr8_3:65211477-65211496 Msa1302630:CDS 35.0%
! GTGGGAAAATGTAGTTGATA+CGG - chr8_3:65211496-65211515 Msa1302630:CDS 35.0%
AAAGTCTTTCATGGATCCAA+GGG - chr8_3:65211733-65211752 Msa1302630:intron 35.0%
ATAACAATGGAATGACGCAT+TGG + chr8_3:65211925-65211944 None:intergenic 35.0%
CATTCCATTGTTATCAACCT+TGG - chr8_3:65211931-65211950 Msa1302630:CDS 35.0%
CTTCTGTTTGAGCAATTACA+CGG + chr8_3:65212166-65212185 None:intergenic 35.0%
GTGTAATTGCTCAAACAGAA+GGG - chr8_3:65212165-65212184 Msa1302630:intron 35.0%
GATTACATGAAACTCTATGC+TGG - chr8_3:65212308-65212327 Msa1302630:intron 35.0%
! CTAAGGTTTCTGAATGCTTT+TGG - chr8_3:65212456-65212475 Msa1302630:intron 35.0%
! ATGCTTTTGGTCTCTTTGAT+TGG - chr8_3:65212469-65212488 Msa1302630:CDS 35.0%
TTTATGCTACACATGCACAT+AGG + chr8_3:65212506-65212525 None:intergenic 35.0%
AGATTCTTCATGTCAACTAC+TGG + chr8_3:65210756-65210775 None:intergenic 35.0%
GAATCTTAACACTGAAGAGA+AGG - chr8_3:65210770-65210789 Msa1302630:three_prime_UTR 35.0%
TGAAAATTGGGGTTTCTTTG+AGG - chr8_3:65210824-65210843 Msa1302630:three_prime_UTR 35.0%
AATTGGTATGCATATATCCG+TGG + chr8_3:65210907-65210926 None:intergenic 35.0%
!!! AGTTTTAAGTAGAAGGTTGC+AGG + chr8_3:65210996-65211015 None:intergenic 35.0%
TACACAACATGAATATGCAG+GGG + chr8_3:65211114-65211133 None:intergenic 35.0%
GTACACAACATGAATATGCA+GGG + chr8_3:65211115-65211134 None:intergenic 35.0%
AGTACACAACATGAATATGC+AGG + chr8_3:65211116-65211135 None:intergenic 35.0%
TGTTGTGTACTTGTGTTTGA+AGG - chr8_3:65211125-65211144 Msa1302630:CDS 35.0%
AACTTTGTCCATCAACTCTA+TGG + chr8_3:65211222-65211241 None:intergenic 35.0%
! AGAAAACTACAAGAAGCGTA+TGG - chr8_3:65211256-65211275 Msa1302630:intron 35.0%
AAAGAAATGGTAGCAAGCAA+AGG - chr8_3:65211290-65211309 Msa1302630:intron 35.0%
TCAGTCAGAAATCAATGACT+TGG - chr8_3:65211325-65211344 Msa1302630:intron 35.0%
! CAGAAATCAATGACTTGGAT+TGG - chr8_3:65211330-65211349 Msa1302630:intron 35.0%
ATATGTTAGAGTTAGGAAGG+TGG + chr8_3:65211376-65211395 None:intergenic 35.0%
CTGATATGTTAGAGTTAGGA+AGG + chr8_3:65211379-65211398 None:intergenic 35.0%
TGTAGTCATGATCAAGATCA+AGG + chr8_3:65211406-65211425 None:intergenic 35.0%
TTGATCTTGATCATGACTAC+AGG - chr8_3:65211405-65211424 Msa1302630:CDS 35.0%
CGATTTGAACCTTCATATTG+TGG - chr8_3:65211477-65211496 Msa1302630:CDS 35.0%
! GTGGGAAAATGTAGTTGATA+CGG - chr8_3:65211496-65211515 Msa1302630:CDS 35.0%
AAAGTCTTTCATGGATCCAA+GGG - chr8_3:65211733-65211752 Msa1302630:intron 35.0%
ATAACAATGGAATGACGCAT+TGG + chr8_3:65211925-65211944 None:intergenic 35.0%
CATTCCATTGTTATCAACCT+TGG - chr8_3:65211931-65211950 Msa1302630:CDS 35.0%
CTTCTGTTTGAGCAATTACA+CGG + chr8_3:65212166-65212185 None:intergenic 35.0%
GTGTAATTGCTCAAACAGAA+GGG - chr8_3:65212165-65212184 Msa1302630:intron 35.0%
GATTACATGAAACTCTATGC+TGG - chr8_3:65212308-65212327 Msa1302630:intron 35.0%
! CTAAGGTTTCTGAATGCTTT+TGG - chr8_3:65212456-65212475 Msa1302630:intron 35.0%
! ATGCTTTTGGTCTCTTTGAT+TGG - chr8_3:65212469-65212488 Msa1302630:CDS 35.0%
TTTATGCTACACATGCACAT+AGG + chr8_3:65212506-65212525 None:intergenic 35.0%
GGTACTCTATGATGCTAAGT+TGG - chr8_3:65210874-65210893 Msa1302630:three_prime_UTR 40.0%
! AGGGGAAATCAGTCTTTTGA+AGG + chr8_3:65211096-65211115 None:intergenic 40.0%
!! TTGATGAAGTTGGTGAACCA+TGG - chr8_3:65211191-65211210 Msa1302630:intron 40.0%
!! TGATGAAGTTGGTGAACCAT+GGG - chr8_3:65211192-65211211 Msa1302630:intron 40.0%
TCAACTCTATGGATATCCCA+TGG + chr8_3:65211211-65211230 None:intergenic 40.0%
TGGGATATCCATAGAGTTGA+TGG - chr8_3:65211211-65211230 Msa1302630:intron 40.0%
GGAGCAAAGGTTCAAAGAAA+TGG - chr8_3:65211277-65211296 Msa1302630:intron 40.0%
!! ACTTGCTGTGTGAGAATCTT+GGG - chr8_3:65211689-65211708 Msa1302630:intron 40.0%
! AGAATCTTGGGCTAGAGAAA+GGG - chr8_3:65211701-65211720 Msa1302630:intron 40.0%
GAAAGTCTTTCATGGATCCA+AGG - chr8_3:65211732-65211751 Msa1302630:intron 40.0%
! ATAAGATCTGGCTTAGGACA+AGG + chr8_3:65211793-65211812 None:intergenic 40.0%
! CCTTTGATAAGATCTGGCTT+AGG + chr8_3:65211799-65211818 None:intergenic 40.0%
CCTAAGCCAGATCTTATCAA+AGG - chr8_3:65211796-65211815 Msa1302630:intron 40.0%
CTGAGTCCTTTGATAAGATC+TGG + chr8_3:65211805-65211824 None:intergenic 40.0%
CTATTCCAAGATGACAAGGT+TGG - chr8_3:65211856-65211875 Msa1302630:intron 40.0%
CAATCCATTGGCCATCTTTA+AGG + chr8_3:65211894-65211913 None:intergenic 40.0%
!! GTCACCAAGGTTGATAACAA+TGG + chr8_3:65211938-65211957 None:intergenic 40.0%
ATACCTCAATTTGGTCACCA+AGG + chr8_3:65211951-65211970 None:intergenic 40.0%
CACACTCTTGTATTTGCCAT+TGG + chr8_3:65212138-65212157 None:intergenic 40.0%
CGTGTAATTGCTCAAACAGA+AGG - chr8_3:65212164-65212183 Msa1302630:intron 40.0%
CACATCTAATTCCTTCACCA+AGG + chr8_3:65212255-65212274 None:intergenic 40.0%
! AGCTTCAAATCTTGGCTCTT+TGG + chr8_3:65212348-65212367 None:intergenic 40.0%
! GCCAAGATTTGAAGCTATGA+AGG - chr8_3:65212352-65212371 Msa1302630:intron 40.0%
GCCTTCATAGCTTCAAATCT+TGG + chr8_3:65212356-65212375 None:intergenic 40.0%
! ATTTGAAGCTATGAAGGCCA+TGG - chr8_3:65212358-65212377 Msa1302630:intron 40.0%
TATGGGAATGTTGGATTCCA+TGG + chr8_3:65212378-65212397 None:intergenic 40.0%
GGTACTCTATGATGCTAAGT+TGG - chr8_3:65210874-65210893 Msa1302630:three_prime_UTR 40.0%
! AGGGGAAATCAGTCTTTTGA+AGG + chr8_3:65211096-65211115 None:intergenic 40.0%
!! TTGATGAAGTTGGTGAACCA+TGG - chr8_3:65211191-65211210 Msa1302630:intron 40.0%
!! TGATGAAGTTGGTGAACCAT+GGG - chr8_3:65211192-65211211 Msa1302630:intron 40.0%
TCAACTCTATGGATATCCCA+TGG + chr8_3:65211211-65211230 None:intergenic 40.0%
TGGGATATCCATAGAGTTGA+TGG - chr8_3:65211211-65211230 Msa1302630:intron 40.0%
GGAGCAAAGGTTCAAAGAAA+TGG - chr8_3:65211277-65211296 Msa1302630:intron 40.0%
!! ACTTGCTGTGTGAGAATCTT+GGG - chr8_3:65211689-65211708 Msa1302630:intron 40.0%
! AGAATCTTGGGCTAGAGAAA+GGG - chr8_3:65211701-65211720 Msa1302630:intron 40.0%
GAAAGTCTTTCATGGATCCA+AGG - chr8_3:65211732-65211751 Msa1302630:intron 40.0%
! ATAAGATCTGGCTTAGGACA+AGG + chr8_3:65211793-65211812 None:intergenic 40.0%
! CCTTTGATAAGATCTGGCTT+AGG + chr8_3:65211799-65211818 None:intergenic 40.0%
CCTAAGCCAGATCTTATCAA+AGG - chr8_3:65211796-65211815 Msa1302630:intron 40.0%
CTGAGTCCTTTGATAAGATC+TGG + chr8_3:65211805-65211824 None:intergenic 40.0%
CTATTCCAAGATGACAAGGT+TGG - chr8_3:65211856-65211875 Msa1302630:intron 40.0%
CAATCCATTGGCCATCTTTA+AGG + chr8_3:65211894-65211913 None:intergenic 40.0%
!! GTCACCAAGGTTGATAACAA+TGG + chr8_3:65211938-65211957 None:intergenic 40.0%
ATACCTCAATTTGGTCACCA+AGG + chr8_3:65211951-65211970 None:intergenic 40.0%
CACACTCTTGTATTTGCCAT+TGG + chr8_3:65212138-65212157 None:intergenic 40.0%
CGTGTAATTGCTCAAACAGA+AGG - chr8_3:65212164-65212183 Msa1302630:intron 40.0%
CACATCTAATTCCTTCACCA+AGG + chr8_3:65212255-65212274 None:intergenic 40.0%
! AGCTTCAAATCTTGGCTCTT+TGG + chr8_3:65212348-65212367 None:intergenic 40.0%
! GCCAAGATTTGAAGCTATGA+AGG - chr8_3:65212352-65212371 Msa1302630:intron 40.0%
GCCTTCATAGCTTCAAATCT+TGG + chr8_3:65212356-65212375 None:intergenic 40.0%
! ATTTGAAGCTATGAAGGCCA+TGG - chr8_3:65212358-65212377 Msa1302630:intron 40.0%
TATGGGAATGTTGGATTCCA+TGG + chr8_3:65212378-65212397 None:intergenic 40.0%
!! TGAAGAGAAGGCATCAACCA+TGG - chr8_3:65210782-65210801 Msa1302630:three_prime_UTR 45.0%
! CTATGATGCTAAGTTGGCCA+CGG - chr8_3:65210880-65210899 Msa1302630:exon 45.0%
CTAATTAGTATGTCCGGCGT+AGG + chr8_3:65211052-65211071 None:intergenic 45.0%
! ACAAGAAGCGTATGGAGCAA+AGG - chr8_3:65211264-65211283 Msa1302630:intron 45.0%
GGCAATGAAGGAATTTGCAG+TGG - chr8_3:65211636-65211655 Msa1302630:CDS 45.0%
TGCAGTGGAACTTGAGAAAC+TGG - chr8_3:65211651-65211670 Msa1302630:CDS 45.0%
!! GACTTGCTGTGTGAGAATCT+TGG - chr8_3:65211688-65211707 Msa1302630:intron 45.0%
! GAGAATCTTGGGCTAGAGAA+AGG - chr8_3:65211700-65211719 Msa1302630:intron 45.0%
! GGATCCAAGGGACCAAATTT+TGG - chr8_3:65211745-65211764 Msa1302630:intron 45.0%
GGTTCCAAAATTTGGTCCCT+TGG + chr8_3:65211752-65211771 None:intergenic 45.0%
AGGAGGGTAGTTGCTAACTT+TGG + chr8_3:65211773-65211792 None:intergenic 45.0%
TTCCAAGATGACAAGGTTGG+TGG - chr8_3:65211859-65211878 Msa1302630:intron 45.0%
GGACTTCAGCTCCTTAAAGA+TGG - chr8_3:65211880-65211899 Msa1302630:intron 45.0%
AGCTCCTTAAAGATGGCCAA+TGG - chr8_3:65211887-65211906 Msa1302630:CDS 45.0%
TTGGTGGGACATCAATCCAT+TGG + chr8_3:65211906-65211925 None:intergenic 45.0%
! CAATGGAATGACGCATTGGT+GGG + chr8_3:65211921-65211940 None:intergenic 45.0%
ACAATGGAATGACGCATTGG+TGG + chr8_3:65211922-65211941 None:intergenic 45.0%
! CAACCTTGGTGACCAAATTG+AGG - chr8_3:65211945-65211964 Msa1302630:CDS 45.0%
GAGATTACTGCATCATTGCC+TGG + chr8_3:65212221-65212240 None:intergenic 45.0%
!! GCTCTTTGGCTTGGAATTTG+AGG + chr8_3:65212334-65212353 None:intergenic 45.0%
! CAAATCTTGGCTCTTTGGCT+TGG + chr8_3:65212343-65212362 None:intergenic 45.0%
! CATGCTTAGGCAGTTGGTAT+GGG + chr8_3:65212395-65212414 None:intergenic 45.0%
! ACATGCTTAGGCAGTTGGTA+TGG + chr8_3:65212396-65212415 None:intergenic 45.0%
TCATCACATGCTTAGGCAGT+TGG + chr8_3:65212401-65212420 None:intergenic 45.0%
!! TGAAGAGAAGGCATCAACCA+TGG - chr8_3:65210782-65210801 Msa1302630:three_prime_UTR 45.0%
! CTATGATGCTAAGTTGGCCA+CGG - chr8_3:65210880-65210899 Msa1302630:exon 45.0%
CTAATTAGTATGTCCGGCGT+AGG + chr8_3:65211052-65211071 None:intergenic 45.0%
! ACAAGAAGCGTATGGAGCAA+AGG - chr8_3:65211264-65211283 Msa1302630:intron 45.0%
GGCAATGAAGGAATTTGCAG+TGG - chr8_3:65211636-65211655 Msa1302630:CDS 45.0%
TGCAGTGGAACTTGAGAAAC+TGG - chr8_3:65211651-65211670 Msa1302630:CDS 45.0%
!! GACTTGCTGTGTGAGAATCT+TGG - chr8_3:65211688-65211707 Msa1302630:intron 45.0%
! GAGAATCTTGGGCTAGAGAA+AGG - chr8_3:65211700-65211719 Msa1302630:intron 45.0%
! GGATCCAAGGGACCAAATTT+TGG - chr8_3:65211745-65211764 Msa1302630:intron 45.0%
GGTTCCAAAATTTGGTCCCT+TGG + chr8_3:65211752-65211771 None:intergenic 45.0%
AGGAGGGTAGTTGCTAACTT+TGG + chr8_3:65211773-65211792 None:intergenic 45.0%
TTCCAAGATGACAAGGTTGG+TGG - chr8_3:65211859-65211878 Msa1302630:intron 45.0%
GGACTTCAGCTCCTTAAAGA+TGG - chr8_3:65211880-65211899 Msa1302630:intron 45.0%
AGCTCCTTAAAGATGGCCAA+TGG - chr8_3:65211887-65211906 Msa1302630:CDS 45.0%
TTGGTGGGACATCAATCCAT+TGG + chr8_3:65211906-65211925 None:intergenic 45.0%
! CAATGGAATGACGCATTGGT+GGG + chr8_3:65211921-65211940 None:intergenic 45.0%
ACAATGGAATGACGCATTGG+TGG + chr8_3:65211922-65211941 None:intergenic 45.0%
! CAACCTTGGTGACCAAATTG+AGG - chr8_3:65211945-65211964 Msa1302630:CDS 45.0%
GAGATTACTGCATCATTGCC+TGG + chr8_3:65212221-65212240 None:intergenic 45.0%
!! GCTCTTTGGCTTGGAATTTG+AGG + chr8_3:65212334-65212353 None:intergenic 45.0%
! CAAATCTTGGCTCTTTGGCT+TGG + chr8_3:65212343-65212362 None:intergenic 45.0%
! CATGCTTAGGCAGTTGGTAT+GGG + chr8_3:65212395-65212414 None:intergenic 45.0%
! ACATGCTTAGGCAGTTGGTA+TGG + chr8_3:65212396-65212415 None:intergenic 45.0%
TCATCACATGCTTAGGCAGT+TGG + chr8_3:65212401-65212420 None:intergenic 45.0%
ATGCATATATCCGTGGACCG+TGG + chr8_3:65210900-65210919 None:intergenic 50.0%
ACTGATCGAACTACCTACGC+CGG - chr8_3:65211036-65211055 Msa1302630:CDS 50.0%
! GATCTGGCTTAGGACAAGGA+GGG + chr8_3:65211789-65211808 None:intergenic 50.0%
! AGATCTGGCTTAGGACAAGG+AGG + chr8_3:65211790-65211809 None:intergenic 50.0%
TATGCCACCAGCATCTGTGT+GGG + chr8_3:65211830-65211849 None:intergenic 50.0%
TTATGCCACCAGCATCTGTG+TGG + chr8_3:65211831-65211850 None:intergenic 50.0%
GTCCACCAACCTTGTCATCT+TGG + chr8_3:65211864-65211883 None:intergenic 50.0%
! GGCAGTTGGTATGGGAATGT+TGG + chr8_3:65212387-65212406 None:intergenic 50.0%
ATGCATATATCCGTGGACCG+TGG + chr8_3:65210900-65210919 None:intergenic 50.0%
ACTGATCGAACTACCTACGC+CGG - chr8_3:65211036-65211055 Msa1302630:CDS 50.0%
! GATCTGGCTTAGGACAAGGA+GGG + chr8_3:65211789-65211808 None:intergenic 50.0%
! AGATCTGGCTTAGGACAAGG+AGG + chr8_3:65211790-65211809 None:intergenic 50.0%
TATGCCACCAGCATCTGTGT+GGG + chr8_3:65211830-65211849 None:intergenic 50.0%
TTATGCCACCAGCATCTGTG+TGG + chr8_3:65211831-65211850 None:intergenic 50.0%
GTCCACCAACCTTGTCATCT+TGG + chr8_3:65211864-65211883 None:intergenic 50.0%
! GGCAGTTGGTATGGGAATGT+TGG + chr8_3:65212387-65212406 None:intergenic 50.0%
AATCTCTCCTGCAGCAGCCT+TGG - chr8_3:65212235-65212254 Msa1302630:intron 55.0%
AATCTCTCCTGCAGCAGCCT+TGG - chr8_3:65212235-65212254 Msa1302630:intron 55.0%
! GCTAAGTTGGCCACGGTCCA+CGG - chr8_3:65210887-65210906 Msa1302630:exon 60.0%
CTCAGAGCCCACACAGATGC+TGG - chr8_3:65211820-65211839 Msa1302630:intron 60.0%
AGAGCCCACACAGATGCTGG+TGG - chr8_3:65211823-65211842 Msa1302630:intron 60.0%
TCCTGCAGCAGCCTTGGTGA+AGG - chr8_3:65212241-65212260 Msa1302630:intron 60.0%
TCCTTCACCAAGGCTGCTGC+AGG + chr8_3:65212245-65212264 None:intergenic 60.0%
! GCTAAGTTGGCCACGGTCCA+CGG - chr8_3:65210887-65210906 Msa1302630:exon 60.0%
CTCAGAGCCCACACAGATGC+TGG - chr8_3:65211820-65211839 Msa1302630:intron 60.0%
AGAGCCCACACAGATGCTGG+TGG - chr8_3:65211823-65211842 Msa1302630:intron 60.0%
TCCTGCAGCAGCCTTGGTGA+AGG - chr8_3:65212241-65212260 Msa1302630:intron 60.0%
TCCTTCACCAAGGCTGCTGC+AGG + chr8_3:65212245-65212264 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 65210741 65212566 65210741 ID=Msa1302630;Name=Msa1302630
chr8_3 mRNA 65210741 65212566 65210741 ID=Msa1302630-mRNA-1;Parent=Msa1302630;Name=Msa1302630-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.75|1|1|1|4|157|315
chr8_3 exon 65210741 65211179 65210741 ID=Msa1302630-mRNA-1:exon:19785;Parent=Msa1302630-mRNA-1
chr8_3 exon 65211341 65211674 65211341 ID=Msa1302630-mRNA-1:exon:19784;Parent=Msa1302630-mRNA-1
chr8_3 exon 65211881 65212107 65211881 ID=Msa1302630-mRNA-1:exon:19783;Parent=Msa1302630-mRNA-1
chr8_3 exon 65212462 65212566 65212462 ID=Msa1302630-mRNA-1:exon:19782;Parent=Msa1302630-mRNA-1
chr8_3 CDS 65212462 65212566 65212462 ID=Msa1302630-mRNA-1:cds;Parent=Msa1302630-mRNA-1
chr8_3 CDS 65211881 65212107 65211881 ID=Msa1302630-mRNA-1:cds;Parent=Msa1302630-mRNA-1
chr8_3 CDS 65211341 65211674 65211341 ID=Msa1302630-mRNA-1:cds;Parent=Msa1302630-mRNA-1
chr8_3 CDS 65210898 65211179 65210898 ID=Msa1302630-mRNA-1:cds;Parent=Msa1302630-mRNA-1
chr8_3 three_prime_UTR 65210741 65210897 65210741 ID=Msa1302630-mRNA-1:three_prime_utr;Parent=Msa1302630-mRNA-1
Gene Sequence

>Msa1302630

ATGGAGAAGTTTCCAGTAGTTGACATGAAGAATCTTAACACTGAAGAGAAGGCATCAACCATGGAGATTATAAAAGATGCTTGTGAAAATTGGGGTTTCTTTGAGTTGGTGAACCATGGGATATCCATAGAGTTGATGGACAAAGTTGAGAAGCTGACAAAAGAAAACTACAAGAAGCGTATGGAGCAAAGGTTCAAAGAAATGGTAGCAAGCAAAGGTTTAGAGTTTGCTCAGTCAGAAATCAATGACTTGGATTGGGAAAGCACTTTCTTTTTGCGCCACCTTCCTAACTCTAACATATCAGAGATCCTTGATCTTGATCATGACTACAGGAAGGCAATGAAGGAATTTGCAGTGGAACTTGAGAAACTGGCTGAGCTACTTCTTGACTTGCTGTGTGAGAATCTTGGGCTAGAGAAAGGGTATTTGAAGAAAGTCTTTCATGGATCCAAGGGACCAAATTTTGGAACCAAAGTTAGCAACTACCCTCCTTGTCCTAAGCCAGATCTTATCAAAGGACTCAGAGCCCACACAGATGCTGGTGGCATAATTTTACTATTCCAAGATGACAAGGTTGGTGGACTTCAGCTCCTTAAAGATGGCCAATGGATTGATGTCCCACCAATGCGTCATTCCATTGTTATCAACCTTGGTGACCAAATTGAGGTGATTACCAATGGCAAATACAAGAGTGTGTTGCACCGTGTAATTGCTCAAACAGAAGGGAACAGAATGTCCATAGCATCATTTTATAATCCAGGCAATGATGCAGTAATCTCTCCTGCAGCAGCCTTGGTGAAGGAATTAGATGTGACAAACCAAGTTTACCCAAAATTTGTTTTTGATGATTACATGAAACTCTATGCTGGCCTCAAATTCCAAGCCAAAGAGCCAAGATTTGAAGCTATGAAGGCCATGGAATCCAACATTCCCATACCAACTGCCTAA
Protein sequence

>Msa1302630

MEKFPVVDMKNLNTEEKASTMEIIKDACENWGFFELVNHGISIELMDKVEKLTKENYKKRMEQRFKEMVASKGLEFAQSEINDLDWESTFFLRHLPNSNISEILDLDHDYRKAMKEFAVELEKLAELLLDLLCENLGLEKGYLKKVFHGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVGGLQLLKDGQWIDVPPMRHSIVINLGDQIEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGNDAVISPAAALVKELDVTNQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMESNIPIPTA*