Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1451190 | A0A072V1Y3 | 78.102 | 137 | 8 | 2 | 1 | 115 | 1 | 137 | 5.67e-59 | 192 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa1451190 | 0.805800 | 1.120431e-49 | -8.615850e-47 |
| Msa1404000 | Msa1451190 | 0.818113 | 2.321756e-52 | -8.615850e-47 |
| Msa1415310 | Msa1451190 | 0.810324 | 1.219935e-50 | -8.615850e-47 |
| Msa1422180 | Msa1451190 | 0.810146 | 1.332365e-50 | -8.615850e-47 |
| Msa0604350 | Msa1451190 | 0.840773 | 7.103005e-58 | -8.615850e-47 |
| Msa0636170 | Msa1451190 | 0.868983 | 4.350406e-66 | -8.615850e-47 |
| Msa0694370 | Msa1451190 | 0.805721 | 1.164447e-49 | -8.615850e-47 |
| Msa0726140 | Msa1451190 | 0.826576 | 2.515363e-54 | -8.615850e-47 |
| Msa0743810 | Msa1451190 | 0.836972 | 6.837731e-57 | -8.615850e-47 |
| Msa0745060 | Msa1451190 | 0.838285 | 3.149960e-57 | -8.615850e-47 |
| Msa0767720 | Msa1451190 | 0.809398 | 1.930096e-50 | -8.615850e-47 |
| Msa0783160 | Msa1451190 | 0.820141 | 8.024851e-53 | -8.615850e-47 |
| Msa0825860 | Msa1451190 | 0.833013 | 6.803612e-56 | -8.615850e-47 |
| Msa0227480 | Msa1451190 | 0.803479 | 3.418014e-49 | -8.615850e-47 |
| Msa0232850 | Msa1451190 | 0.816244 | 6.111663e-52 | -8.615850e-47 |
| Msa1269670 | Msa1451190 | 0.835824 | 1.340349e-56 | -8.615850e-47 |
| Msa1270230 | Msa1451190 | 0.825293 | 5.071730e-54 | -8.615850e-47 |
| Msa1270240 | Msa1451190 | 0.831205 | 1.905112e-55 | -8.615850e-47 |
| Msa1270270 | Msa1451190 | 0.805143 | 1.538768e-49 | -8.615850e-47 |
| Msa1283330 | Msa1451190 | 0.818952 | 1.498100e-52 | -8.615850e-47 |
| Msa1285930 | Msa1451190 | 0.835715 | 1.427788e-56 | -8.615850e-47 |
| Msa1287800 | Msa1451190 | 0.818434 | 1.963867e-52 | -8.615850e-47 |
| Msa1287810 | Msa1451190 | 0.832158 | 1.108738e-55 | -8.615850e-47 |
| Msa1297210 | Msa1451190 | 0.801331 | 9.471008e-49 | -8.615850e-47 |
| Msa0384800 | Msa1451190 | 0.830045 | 3.662987e-55 | -8.615850e-47 |
| Msa0414420 | Msa1451190 | 0.816938 | 4.272739e-52 | -8.615850e-47 |
| Msa0450000 | Msa1451190 | 0.804660 | 1.941588e-49 | -8.615850e-47 |
| Msa0452900 | Msa1451190 | 0.844098 | 9.330312e-59 | -8.615850e-47 |
| Msa0453120 | Msa1451190 | 0.804737 | 1.871108e-49 | -8.615850e-47 |
| Msa0454910 | Msa1451190 | 0.841810 | 3.790459e-58 | -8.615850e-47 |
| Msa0989060 | Msa1451190 | 0.822857 | 1.892483e-53 | -8.615850e-47 |
| Msa1016280 | Msa1451190 | 0.817689 | 2.894282e-52 | -8.615850e-47 |
| Msa1024240 | Msa1451190 | 0.806297 | 8.807984e-50 | -8.615850e-47 |
| Msa1025360 | Msa1451190 | 0.826982 | 2.011397e-54 | -8.615850e-47 |
| Msa1025370 | Msa1451190 | 0.830902 | 2.260261e-55 | -8.615850e-47 |
| Msa1042430 | Msa1451190 | 0.860520 | 1.951231e-63 | -8.615850e-47 |
| Msa1044830 | Msa1451190 | 0.833186 | 6.164209e-56 | -8.615850e-47 |
| Msa1044840 | Msa1451190 | 0.825315 | 5.013116e-54 | -8.615850e-47 |
| Msa1054790 | Msa1451190 | 0.807269 | 5.488904e-50 | -8.615850e-47 |
| Msa1092990 | Msa1451190 | 0.826281 | 2.957421e-54 | -8.615850e-47 |
| Msa1100980 | Msa1451190 | 0.836441 | 9.339980e-57 | -8.615850e-47 |
| Msa0267000 | Msa1451190 | 0.820560 | 6.430702e-53 | -8.615850e-47 |
| Msa0267010 | Msa1451190 | 0.820630 | 6.197671e-53 | -8.615850e-47 |
| Msa0342240 | Msa1451190 | 0.828578 | 8.318678e-55 | -8.615850e-47 |
| Msa0360510 | Msa1451190 | 0.807226 | 5.604482e-50 | -8.615850e-47 |
| Msa1109440 | Msa1451190 | 0.803628 | 3.183832e-49 | -8.615850e-47 |
| Msa1135740 | Msa1451190 | 0.825623 | 4.237588e-54 | -8.615850e-47 |
| Msa1136090 | Msa1451190 | 0.805507 | 1.291388e-49 | -8.615850e-47 |
| Msa1146110 | Msa1451190 | 0.825246 | 5.203379e-54 | -8.615850e-47 |
| Msa1173920 | Msa1451190 | 0.801190 | 1.012166e-48 | -8.615850e-47 |
| Msa1187940 | Msa1451190 | 0.825120 | 5.573327e-54 | -8.615850e-47 |
| Msa1187950 | Msa1451190 | 0.819561 | 1.088461e-52 | -8.615850e-47 |
| Msa1192640 | Msa1451190 | 0.817009 | 4.117104e-52 | -8.615850e-47 |
| Msa0506270 | Msa1451190 | 0.807541 | 4.807341e-50 | -8.615850e-47 |
| Msa0596150 | Msa1451190 | 0.803849 | 2.865141e-49 | -8.615850e-47 |
| Msa0598780 | Msa1451190 | 0.805752 | 1.146877e-49 | -8.615850e-47 |
| Msa0846210 | Msa1451190 | 0.825678 | 4.111470e-54 | -8.615850e-47 |
| Msa0846330 | Msa1451190 | 0.800959 | 1.128235e-48 | -8.615850e-47 |
| Msa0854980 | Msa1451190 | 0.821436 | 4.042693e-53 | -8.615850e-47 |
| Msa0865320 | Msa1451190 | 0.817085 | 3.960138e-52 | -8.615850e-47 |
| Msa0885280 | Msa1451190 | 0.810924 | 9.048947e-51 | -8.615850e-47 |
| Msa0885290 | Msa1451190 | 0.812863 | 3.421823e-51 | -8.615850e-47 |
| Msa0907260 | Msa1451190 | 0.822296 | 2.555759e-53 | -8.615850e-47 |
| Msa0956270 | Msa1451190 | 0.814672 | 1.367496e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1451190 | MtrunA17_Chr3g0131781 | 78.102 | 137 | 8 | 2 | 1 | 115 | 1 | 137 | 1.09e-62 | 192 |
| Msa1451190 | MtrunA17_Chr8g0385941 | 41.916 | 167 | 40 | 9 | 1 | 116 | 1 | 161 | 6.96e-21 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTCAAACCAAATACAATT+AGG | 0.178192 | tig0033260:-11945 | None:intergenic |
| CCAATTCGATCTTGGTCTTT+TGG | 0.187350 | tig0033260:-11595 | None:intergenic |
| TGAACACCCCTAATTGTATT+TGG | 0.203872 | tig0033260:+11937 | Msa1451190:CDS |
| TGGTAGCTGGAAAGTGAAAA+AGG | 0.224871 | tig0033260:+11569 | Msa1451190:CDS |
| TCGTTGCTCCGCCGTTTATT+TGG | 0.233205 | tig0033260:-11304 | None:intergenic |
| GTTCAAACCAAATACAATTA+GGG | 0.300309 | tig0033260:-11944 | None:intergenic |
| AACACCGACGGTGTAATTAT+TGG | 0.331686 | tig0033260:+11549 | Msa1451190:CDS |
| CCTCTTTCTTGATGTGCATT+GGG | 0.358724 | tig0033260:-11985 | None:intergenic |
| CAAAAGACCAAGATCGAATT+GGG | 0.359194 | tig0033260:+11596 | Msa1451190:CDS |
| GCCTCTTTCTTGATGTGCAT+TGG | 0.361842 | tig0033260:-11986 | None:intergenic |
| CCAAAAGACCAAGATCGAAT+TGG | 0.364115 | tig0033260:+11595 | Msa1451190:CDS |
| AAATCATGGCGATTCGGCTT+CGG | 0.384660 | tig0033260:+11443 | Msa1451190:CDS |
| CCGCCGTTTATTTGGACCTT+CGG | 0.398024 | tig0033260:-11296 | None:intergenic |
| GGTCTCCGATGTCGCCTAAT+CGG | 0.413080 | tig0033260:-11388 | None:intergenic |
| TTCGGCTTCGGCAACGTCTC+AGG | 0.441191 | tig0033260:+11455 | Msa1451190:CDS |
| TTCATTGTTCTAAACTGCAT+TGG | 0.445305 | tig0033260:-11918 | None:intergenic |
| CCACCGAAGGTCCAAATAAA+CGG | 0.453209 | tig0033260:+11293 | Msa1451190:CDS |
| GAAGAAACCCAATTCGATCT+TGG | 0.472216 | tig0033260:-11603 | None:intergenic |
| TTCGATCCGTGAGGTTCTGA+AGG | 0.475990 | tig0033260:-11344 | None:intergenic |
| AGTTCAAAATCATGGCGATT+CGG | 0.480998 | tig0033260:+11437 | Msa1451190:CDS |
| CGCCTAATCGGACGCTGGGT+CGG | 0.497118 | tig0033260:-11376 | None:intergenic |
| GCGGCGAGGGTGGGAATCAG+AGG | 0.498456 | tig0033260:-11414 | None:intergenic |
| CCCAATGCACATCAAGAAAG+AGG | 0.499995 | tig0033260:+11985 | Msa1451190:CDS |
| CTCGCCGCAGTTCAAAATCA+TGG | 0.500043 | tig0033260:+11429 | Msa1451190:CDS |
| AATAATTACACCGTCGGTGT+TGG | 0.505458 | tig0033260:-11547 | None:intergenic |
| GTTTCTTCGCGAATTGAAGA+AGG | 0.522515 | tig0033260:+11618 | Msa1451190:CDS |
| TTTATTTGGACCTTCGGTGG+CGG | 0.523272 | tig0033260:-11290 | None:intergenic |
| GATGTCGCCTAATCGGACGC+TGG | 0.529379 | tig0033260:-11381 | None:intergenic |
| ACGGTGTAATTATTGGTAGC+TGG | 0.534282 | tig0033260:+11556 | Msa1451190:CDS |
| ATGTCGCCTAATCGGACGCT+GGG | 0.537206 | tig0033260:-11380 | None:intergenic |
| CCGTTTATTTGGACCTTCGG+TGG | 0.544420 | tig0033260:-11293 | None:intergenic |
| TCGATCCGTGAGGTTCTGAA+GGG | 0.559702 | tig0033260:-11343 | None:intergenic |
| CACCGACCCAGCGTCCGATT+AGG | 0.565703 | tig0033260:+11374 | Msa1451190:CDS |
| CGGCGAGGGTGGGAATCAGA+GGG | 0.591797 | tig0033260:-11413 | None:intergenic |
| GGAAGAGGTTCCGCCACCGA+AGG | 0.594303 | tig0033260:+11280 | Msa1451190:CDS |
| GAGGGTGGGAATCAGAGGGT+TGG | 0.602586 | tig0033260:-11409 | None:intergenic |
| GAAACGGAAGAAAATGGAAG+AGG | 0.606203 | tig0033260:+11265 | None:intergenic |
| GTGCATTGGGATGCAAAAGA+TGG | 0.609464 | tig0033260:-11972 | None:intergenic |
| CGATCCGTGAGGTTCTGAAG+GGG | 0.626502 | tig0033260:-11342 | None:intergenic |
| TTCAAACCAAATACAATTAG+GGG | 0.626752 | tig0033260:-11943 | None:intergenic |
| AGCGTCCGATTAGGCGACAT+CGG | 0.639876 | tig0033260:+11383 | Msa1451190:CDS |
| GATCCGTGAGGTTCTGAAGG+GGG | 0.654909 | tig0033260:-11341 | None:intergenic |
| GCTACCAATAATTACACCGT+CGG | 0.667969 | tig0033260:-11553 | None:intergenic |
| GACGTAGAAACCAACACCGA+CGG | 0.675808 | tig0033260:+11537 | Msa1451190:intron |
| CAGAACCTCACGGATCGAAG+CGG | 0.686667 | tig0033260:+11348 | Msa1451190:CDS |
| TGTTGCCGCTTCGATCCGTG+AGG | 0.714492 | tig0033260:-11353 | None:intergenic |
| CCGAAGGTCCAAATAAACGG+CGG | 0.735932 | tig0033260:+11296 | Msa1451190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAACCAGTTTTTTTTAAAG+TGG | + | tig0033260:11856-11875 | Msa1451190:intron | 20.0% |
| !!! | AAAACCACTTTAAAAAAAAC+TGG | - | tig0033260:11863-11882 | None:intergenic | 20.0% |
| !!! | AGATTTTGAAGGTGATAATT+CGG | + | tig0033260:11674-11693 | Msa1451190:intron | 25.0% |
| ! | AACCAGTTCAAAAAAAAATC+TGG | + | tig0033260:11706-11725 | Msa1451190:intron | 25.0% |
| !!! | AACCAGATTTTTTTTTGAAC+TGG | - | tig0033260:11711-11730 | None:intergenic | 25.0% |
| ! | CTGGTTAAAAATAAGTAAAC+CGG | + | tig0033260:11725-11744 | Msa1451190:intron | 25.0% |
| ! | TTCAAACCAAATACAATTAG+GGG | - | tig0033260:11946-11965 | None:intergenic | 25.0% |
| ! | GTTCAAACCAAATACAATTA+GGG | - | tig0033260:11947-11966 | None:intergenic | 25.0% |
| ! | TCCTTTGACTAATTTGACTT+CGG | + | tig0033260:11496-11515 | Msa1451190:intron | 30.0% |
| ! | GATTTGTATCGAGATTTTGA+AGG | + | tig0033260:11663-11682 | Msa1451190:CDS | 30.0% |
| !! | GATTTTGAAGGTGATAATTC+GGG | + | tig0033260:11675-11694 | Msa1451190:intron | 30.0% |
| ! | ACCGGTTTAAAACTATAAAC+CGG | + | tig0033260:11743-11762 | Msa1451190:intron | 30.0% |
| !!! | ACCGGTTTATAGTTTTAAAC+CGG | - | tig0033260:11747-11766 | None:intergenic | 30.0% |
| !!! | CCGGTTTATTTATTTTGAAC+CGG | - | tig0033260:11776-11795 | None:intergenic | 30.0% |
| CCGGTTCAAAATAAATAAAC+CGG | + | tig0033260:11773-11792 | Msa1451190:intron | 30.0% | |
| ! | TTTTTAAACCAGTTCCAGTT+CGG | - | tig0033260:11835-11854 | None:intergenic | 30.0% |
| CTGAATTGTATCCATTAATG+TGG | + | tig0033260:11888-11907 | Msa1451190:intron | 30.0% | |
| ! | TTCATTGTTCTAAACTGCAT+TGG | - | tig0033260:11921-11940 | None:intergenic | 30.0% |
| CGTTCAAACCAAATACAATT+AGG | - | tig0033260:11948-11967 | None:intergenic | 30.0% | |
| AGTTCAAAATCATGGCGATT+CGG | + | tig0033260:11437-11456 | Msa1451190:CDS | 35.0% | |
| ACCGAAGTCAAATTAGTCAA+AGG | - | tig0033260:11500-11519 | None:intergenic | 35.0% | |
| CAAAAGACCAAGATCGAATT+GGG | + | tig0033260:11596-11615 | Msa1451190:CDS | 35.0% | |
| TTGGAACTGAACCACATTAA+TGG | - | tig0033260:11902-11921 | None:intergenic | 35.0% | |
| TGAACACCCCTAATTGTATT+TGG | + | tig0033260:11937-11956 | Msa1451190:CDS | 35.0% | |
| ! | ATCGCCATGATTTTGAACTG+CGG | - | tig0033260:11436-11455 | None:intergenic | 40.0% |
| TCTACGTCTTCCATCGAAAT+CGG | - | tig0033260:11525-11544 | None:intergenic | 40.0% | |
| AATAATTACACCGTCGGTGT+TGG | - | tig0033260:11550-11569 | None:intergenic | 40.0% | |
| AACACCGACGGTGTAATTAT+TGG | + | tig0033260:11549-11568 | Msa1451190:CDS | 40.0% | |
| GCTACCAATAATTACACCGT+CGG | - | tig0033260:11556-11575 | None:intergenic | 40.0% | |
| ! | ACGGTGTAATTATTGGTAGC+TGG | + | tig0033260:11556-11575 | Msa1451190:CDS | 40.0% |
| TGGTAGCTGGAAAGTGAAAA+AGG | + | tig0033260:11569-11588 | Msa1451190:CDS | 40.0% | |
| GGTAGCTGGAAAGTGAAAAA+GGG | + | tig0033260:11570-11589 | Msa1451190:CDS | 40.0% | |
| !! | CCAATTCGATCTTGGTCTTT+TGG | - | tig0033260:11598-11617 | None:intergenic | 40.0% |
| CCAAAAGACCAAGATCGAAT+TGG | + | tig0033260:11595-11614 | Msa1451190:CDS | 40.0% | |
| GAAGAAACCCAATTCGATCT+TGG | - | tig0033260:11606-11625 | None:intergenic | 40.0% | |
| GTTTCTTCGCGAATTGAAGA+AGG | + | tig0033260:11618-11637 | Msa1451190:CDS | 40.0% | |
| !! | ACTATAAACCGGTTCGAAAC+CGG | + | tig0033260:11754-11773 | Msa1451190:intron | 40.0% |
| !! | ATTTTGAACCGGTTTCGAAC+CGG | - | tig0033260:11765-11784 | None:intergenic | 40.0% |
| ! | ACCGGTTCAAAACTGTAAAC+CGG | + | tig0033260:11791-11810 | Msa1451190:intron | 40.0% |
| !!! | ACCGGTTTACAGTTTTGAAC+CGG | - | tig0033260:11795-11814 | None:intergenic | 40.0% |
| CCTCTTTCTTGATGTGCATT+GGG | - | tig0033260:11988-12007 | None:intergenic | 40.0% | |
| TTTATTTGGACCTTCGGTGG+CGG | - | tig0033260:11293-11312 | None:intergenic | 45.0% | |
| CCACCGAAGGTCCAAATAAA+CGG | + | tig0033260:11293-11312 | Msa1451190:CDS | 45.0% | |
| ! | ATGATTTTGAACTGCGGCGA+GGG | - | tig0033260:11430-11449 | None:intergenic | 45.0% |
| ! | AAATCATGGCGATTCGGCTT+CGG | + | tig0033260:11443-11462 | Msa1451190:CDS | 45.0% |
| GTCAAAGGACGAGTCTTCAA+GGG | - | tig0033260:11485-11504 | None:intergenic | 45.0% | |
| AGTCAAAGGACGAGTCTTCA+AGG | - | tig0033260:11486-11505 | None:intergenic | 45.0% | |
| ACTTCGGTTTCCGATTTCGA+TGG | + | tig0033260:11512-11531 | Msa1451190:intron | 45.0% | |
| !! | ACTGTAAACCGGTTCTGAAC+CGG | + | tig0033260:11802-11821 | Msa1451190:intron | 45.0% |
| ! | GTTTAGAACCGGTTCAGAAC+CGG | - | tig0033260:11813-11832 | None:intergenic | 45.0% |
| ! | GTTCCAGTTCGGTTTAGAAC+CGG | - | tig0033260:11824-11843 | None:intergenic | 45.0% |
| ! | GTTCTAAACCGAACTGGAAC+TGG | + | tig0033260:11824-11843 | Msa1451190:intron | 45.0% |
| GTGCATTGGGATGCAAAAGA+TGG | - | tig0033260:11975-11994 | None:intergenic | 45.0% | |
| CCCAATGCACATCAAGAAAG+AGG | + | tig0033260:11985-12004 | Msa1451190:CDS | 45.0% | |
| GCCTCTTTCTTGATGTGCAT+TGG | - | tig0033260:11989-12008 | None:intergenic | 45.0% | |
| CCGTTTATTTGGACCTTCGG+TGG | - | tig0033260:11296-11315 | None:intergenic | 50.0% | |
| CCGCCGTTTATTTGGACCTT+CGG | - | tig0033260:11299-11318 | None:intergenic | 50.0% | |
| CCGAAGGTCCAAATAAACGG+CGG | + | tig0033260:11296-11315 | Msa1451190:CDS | 50.0% | |
| TCGTTGCTCCGCCGTTTATT+TGG | - | tig0033260:11307-11326 | None:intergenic | 50.0% | |
| !! | TCGATCCGTGAGGTTCTGAA+GGG | - | tig0033260:11346-11365 | None:intergenic | 50.0% |
| ! | TTCGATCCGTGAGGTTCTGA+AGG | - | tig0033260:11347-11366 | None:intergenic | 50.0% |
| ! | CATGATTTTGAACTGCGGCG+AGG | - | tig0033260:11431-11450 | None:intergenic | 50.0% |
| CTCGCCGCAGTTCAAAATCA+TGG | + | tig0033260:11429-11448 | Msa1451190:CDS | 50.0% | |
| GACGTAGAAACCAACACCGA+CGG | + | tig0033260:11537-11556 | Msa1451190:intron | 50.0% | |
| !! | GAACCGGTTCTAAACCGAAC+TGG | + | tig0033260:11818-11837 | Msa1451190:intron | 50.0% |
| CTACCCCCTTCAGAACCTCA+CGG | + | tig0033260:11338-11357 | Msa1451190:CDS | 55.0% | |
| !! | GATCCGTGAGGTTCTGAAGG+GGG | - | tig0033260:11344-11363 | None:intergenic | 55.0% |
| !! | CGATCCGTGAGGTTCTGAAG+GGG | - | tig0033260:11345-11364 | None:intergenic | 55.0% |
| CAGAACCTCACGGATCGAAG+CGG | + | tig0033260:11348-11367 | Msa1451190:CDS | 55.0% | |
| ATGTCGCCTAATCGGACGCT+GGG | - | tig0033260:11383-11402 | None:intergenic | 55.0% | |
| AGCGTCCGATTAGGCGACAT+CGG | + | tig0033260:11383-11402 | Msa1451190:CDS | 55.0% | |
| GGTCTCCGATGTCGCCTAAT+CGG | - | tig0033260:11391-11410 | None:intergenic | 55.0% | |
| ! | TTTTGAACTGCGGCGAGGGT+GGG | - | tig0033260:11426-11445 | None:intergenic | 55.0% |
| ! | ATTTTGAACTGCGGCGAGGG+TGG | - | tig0033260:11427-11446 | None:intergenic | 55.0% |
| ! | TGTTGCCGCTTCGATCCGTG+AGG | - | tig0033260:11356-11375 | None:intergenic | 60.0% |
| GATGTCGCCTAATCGGACGC+TGG | - | tig0033260:11384-11403 | None:intergenic | 60.0% | |
| GAGGGTGGGAATCAGAGGGT+TGG | - | tig0033260:11412-11431 | None:intergenic | 60.0% | |
| TTCGGCTTCGGCAACGTCTC+AGG | + | tig0033260:11455-11474 | Msa1451190:CDS | 60.0% | |
| GGAAGAGGTTCCGCCACCGA+AGG | + | tig0033260:11280-11299 | Msa1451190:CDS | 65.0% | |
| CACCGACCCAGCGTCCGATT+AGG | + | tig0033260:11374-11393 | Msa1451190:CDS | 65.0% | |
| CGCCTAATCGGACGCTGGGT+CGG | - | tig0033260:11379-11398 | None:intergenic | 65.0% | |
| CGGCGAGGGTGGGAATCAGA+GGG | - | tig0033260:11416-11435 | None:intergenic | 65.0% | |
| GCGGCGAGGGTGGGAATCAG+AGG | - | tig0033260:11417-11436 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0033260 | gene | 11278 | 12016 | 11278 | ID=Msa1451190;Name=Msa1451190 |
| tig0033260 | mRNA | 11278 | 12016 | 11278 | ID=Msa1451190-mRNA-1;Parent=Msa1451190;Name=Msa1451190-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|0.66|1|1|3|0|148 |
| tig0033260 | exon | 11278 | 11476 | 11278 | ID=Msa1451190-mRNA-1:exon:17878;Parent=Msa1451190-mRNA-1 |
| tig0033260 | exon | 11538 | 11684 | 11538 | ID=Msa1451190-mRNA-1:exon:17879;Parent=Msa1451190-mRNA-1 |
| tig0033260 | exon | 11916 | 12016 | 11916 | ID=Msa1451190-mRNA-1:exon:17880;Parent=Msa1451190-mRNA-1 |
| tig0033260 | CDS | 11278 | 11476 | 11278 | ID=Msa1451190-mRNA-1:cds;Parent=Msa1451190-mRNA-1 |
| tig0033260 | CDS | 11538 | 11684 | 11538 | ID=Msa1451190-mRNA-1:cds;Parent=Msa1451190-mRNA-1 |
| tig0033260 | CDS | 11916 | 12016 | 11916 | ID=Msa1451190-mRNA-1:cds;Parent=Msa1451190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
