Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506270 | AES70281.2 | 52.866 | 314 | 59 | 5 | 197 | 426 | 19 | 327 | 7.90e-88 | 282 |
| Msa0506270 | AES70281.2 | 74.886 | 219 | 31 | 3 | 1 | 195 | 1 | 219 | 5.20e-99 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506270 | sp|Q7XTT4|NUCL2_ORYSJ | 38.318 | 107 | 60 | 4 | 334 | 438 | 412 | 514 | 1.46e-12 | 73.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506270 | G7J1Z7 | 52.866 | 314 | 59 | 5 | 197 | 426 | 19 | 327 | 3.77e-88 | 282 |
| Msa0506270 | G7J1Z7 | 74.886 | 219 | 31 | 3 | 1 | 195 | 1 | 219 | 2.49e-99 | 310 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0506270 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0506270 | 0.842060 | 3.256037e-58 | -8.615850e-47 |
| Msa0016570 | Msa0506270 | 0.843555 | 1.303590e-58 | -8.615850e-47 |
| Msa0016580 | Msa0506270 | 0.828522 | 8.577607e-55 | -8.615850e-47 |
| Msa0056530 | Msa0506270 | 0.803884 | 2.817576e-49 | -8.615850e-47 |
| Msa0102070 | Msa0506270 | 0.849198 | 3.770518e-60 | -8.615850e-47 |
| Msa0110270 | Msa0506270 | 0.802934 | 4.432404e-49 | -8.615850e-47 |
| Msa0111510 | Msa0506270 | 0.800110 | 1.680338e-48 | -8.615850e-47 |
| Msa0123810 | Msa0506270 | 0.834421 | 3.026558e-56 | -8.615850e-47 |
| Msa0124100 | Msa0506270 | 0.816838 | 4.499437e-52 | -8.615850e-47 |
| Msa0142220 | Msa0506270 | 0.880992 | 3.475418e-70 | -8.615850e-47 |
| Msa0145750 | Msa0506270 | 0.805741 | 1.153299e-49 | -8.615850e-47 |
| Msa0153910 | Msa0506270 | 0.816087 | 6.624860e-52 | -8.615850e-47 |
| Msa0200000 | Msa0506270 | 0.807675 | 4.502141e-50 | -8.615850e-47 |
| Msa0227480 | Msa0506270 | 0.871675 | 5.702617e-67 | -8.615850e-47 |
| Msa0231000 | Msa0506270 | 0.830700 | 2.532927e-55 | -8.615850e-47 |
| Msa0232850 | Msa0506270 | 0.858060 | 1.067215e-62 | -8.615850e-47 |
| Msa0235140 | Msa0506270 | 0.803430 | 3.500110e-49 | -8.615850e-47 |
| Msa0365500 | Msa0506270 | 0.822594 | 2.179261e-53 | -8.615850e-47 |
| Msa0371730 | Msa0506270 | 0.804512 | 2.085164e-49 | -8.615850e-47 |
| Msa0384800 | Msa0506270 | 0.847229 | 1.320116e-59 | -8.615850e-47 |
| Msa0384890 | Msa0506270 | 0.815832 | 7.552709e-52 | -8.615850e-47 |
| Msa0390070 | Msa0506270 | 0.810822 | 9.520444e-51 | -8.615850e-47 |
| Msa0391180 | Msa0506270 | 0.804355 | 2.247710e-49 | -8.615850e-47 |
| Msa0394970 | Msa0506270 | 0.813916 | 2.008860e-51 | -8.615850e-47 |
| Msa0406120 | Msa0506270 | 0.825840 | 3.763981e-54 | -8.615850e-47 |
| Msa0407750 | Msa0506270 | 0.858633 | 7.202908e-63 | -8.615850e-47 |
| Msa0414410 | Msa0506270 | 0.849390 | 3.335244e-60 | -8.615850e-47 |
| Msa0414420 | Msa0506270 | 0.863079 | 3.214548e-64 | -8.615850e-47 |
| Msa0429880 | Msa0506270 | 0.812220 | 4.730122e-51 | -8.615850e-47 |
| Msa0435230 | Msa0506270 | 0.832857 | 7.438992e-56 | -8.615850e-47 |
| Msa0436780 | Msa0506270 | 0.921404 | 3.735829e-88 | -8.615850e-47 |
| Msa0436800 | Msa0506270 | 0.861924 | 7.284815e-64 | -8.615850e-47 |
| Msa0438620 | Msa0506270 | 0.811388 | 7.179120e-51 | -8.615850e-47 |
| Msa0444130 | Msa0506270 | 0.842745 | 2.143242e-58 | -8.615850e-47 |
| Msa0450000 | Msa0506270 | 0.858630 | 7.221154e-63 | -8.615850e-47 |
| Msa0450570 | Msa0506270 | 0.820872 | 5.452284e-53 | -8.615850e-47 |
| Msa0451730 | Msa0506270 | 0.820685 | 6.019678e-53 | -8.615850e-47 |
| Msa0452900 | Msa0506270 | 0.889173 | 3.069012e-73 | -8.615850e-47 |
| Msa0453120 | Msa0506270 | 0.951424 | 2.102711e-109 | -8.615850e-47 |
| Msa0454370 | Msa0506270 | 0.836158 | 1.102732e-56 | -8.615850e-47 |
| Msa0454910 | Msa0506270 | 0.828491 | 8.730013e-55 | -8.615850e-47 |
| Msa0459160 | Msa0506270 | 0.835402 | 1.713272e-56 | -8.615850e-47 |
| Msa0459170 | Msa0506270 | 0.811637 | 6.338819e-51 | -8.615850e-47 |
| Msa0479340 | Msa0506270 | 0.818062 | 2.384319e-52 | -8.615850e-47 |
| Msa0251320 | Msa0506270 | 0.820011 | 8.591069e-53 | -8.615850e-47 |
| Msa0256440 | Msa0506270 | 0.804856 | 1.766989e-49 | -8.615850e-47 |
| Msa0267000 | Msa0506270 | 0.888866 | 4.036507e-73 | -8.615850e-47 |
| Msa0267010 | Msa0506270 | 0.871260 | 7.823176e-67 | -8.615850e-47 |
| Msa0270520 | Msa0506270 | 0.833509 | 5.119326e-56 | -8.615850e-47 |
| Msa0290870 | Msa0506270 | 0.805217 | 1.484718e-49 | -8.615850e-47 |
| Msa0304170 | Msa0506270 | 0.814277 | 1.672500e-51 | -8.615850e-47 |
| Msa0306460 | Msa0506270 | 0.842022 | 3.332678e-58 | -8.615850e-47 |
| Msa0309020 | Msa0506270 | 0.803277 | 3.763910e-49 | -8.615850e-47 |
| Msa0311750 | Msa0506270 | 0.822039 | 2.931761e-53 | -8.615850e-47 |
| Msa0313760 | Msa0506270 | 0.808673 | 2.759818e-50 | -8.615850e-47 |
| Msa0342240 | Msa0506270 | 0.843646 | 1.232545e-58 | -8.615850e-47 |
| Msa0360510 | Msa0506270 | 0.886471 | 3.323269e-72 | -8.615850e-47 |
| Msa0363300 | Msa0506270 | 0.818994 | 1.465905e-52 | -8.615850e-47 |
| Msa0486950 | Msa0506270 | 0.808213 | 3.459173e-50 | -8.615850e-47 |
| Msa0491590 | Msa0506270 | 0.841879 | 3.636168e-58 | -8.615850e-47 |
| Msa0502760 | Msa0506270 | 0.807267 | 5.494105e-50 | -8.615850e-47 |
| Msa0506270 | Msa0534540 | 0.822675 | 2.086400e-53 | -8.615850e-47 |
| Msa0506270 | Msa0564890 | 0.832480 | 9.227052e-56 | -8.615850e-47 |
| Msa0506270 | Msa0596150 | 0.844253 | 8.477925e-59 | -8.615850e-47 |
| Msa0506270 | Msa0600700 | 0.809392 | 1.935288e-50 | -8.615850e-47 |
| Msa0506270 | Msa0604350 | 0.832240 | 1.058093e-55 | -8.615850e-47 |
| Msa0506270 | Msa0636170 | 0.858957 | 5.763632e-63 | -8.615850e-47 |
| Msa0506270 | Msa0639610 | 0.846776 | 1.755815e-59 | -8.615850e-47 |
| Msa0506270 | Msa0678930 | 0.810416 | 1.165107e-50 | -8.615850e-47 |
| Msa0506270 | Msa0689390 | 0.800283 | 1.549487e-48 | -8.615850e-47 |
| Msa0506270 | Msa0694370 | 0.843521 | 1.331670e-58 | -8.615850e-47 |
| Msa0506270 | Msa0725850 | 0.817565 | 3.088010e-52 | -8.615850e-47 |
| Msa0506270 | Msa0726140 | 0.875078 | 4.091352e-68 | -8.615850e-47 |
| Msa0506270 | Msa0729800 | 0.837453 | 5.150861e-57 | -8.615850e-47 |
| Msa0506270 | Msa0732310 | 0.810196 | 1.300190e-50 | -8.615850e-47 |
| Msa0506270 | Msa0733290 | 0.815272 | 1.006309e-51 | -8.615850e-47 |
| Msa0506270 | Msa0735080 | 0.807865 | 4.102302e-50 | -8.615850e-47 |
| Msa0506270 | Msa0741990 | 0.812379 | 4.367930e-51 | -8.615850e-47 |
| Msa0506270 | Msa0743810 | 0.888529 | 5.445705e-73 | -8.615850e-47 |
| Msa0506270 | Msa0745060 | 0.879644 | 1.052797e-69 | -8.615850e-47 |
| Msa0506270 | Msa0762360 | 0.811109 | 8.253408e-51 | -8.615850e-47 |
| Msa0506270 | Msa0764960 | 0.805160 | 1.526468e-49 | -8.615850e-47 |
| Msa0506270 | Msa0766630 | 0.815069 | 1.116668e-51 | -8.615850e-47 |
| Msa0506270 | Msa0767720 | 0.837740 | 4.349629e-57 | -8.615850e-47 |
| Msa0506270 | Msa0775300 | 0.801063 | 1.074661e-48 | -8.615850e-47 |
| Msa0506270 | Msa0777870 | 0.848628 | 5.428997e-60 | -8.615850e-47 |
| Msa0506270 | Msa0783160 | 0.845318 | 4.376288e-59 | -8.615850e-47 |
| Msa0506270 | Msa0784290 | 0.828624 | 8.107379e-55 | -8.615850e-47 |
| Msa0506270 | Msa0784300 | 0.800156 | 1.645220e-48 | -8.615850e-47 |
| Msa0506270 | Msa0787600 | 0.871358 | 7.264873e-67 | -8.615850e-47 |
| Msa0506270 | Msa0789250 | 0.813295 | 2.751560e-51 | -8.615850e-47 |
| Msa0506270 | Msa0808010 | 0.826508 | 2.609930e-54 | -8.615850e-47 |
| Msa0506270 | Msa0808020 | 0.821230 | 4.510352e-53 | -8.615850e-47 |
| Msa0506270 | Msa0811080 | 0.818852 | 1.578927e-52 | -8.615850e-47 |
| Msa0506270 | Msa0811270 | 0.818912 | 1.529798e-52 | -8.615850e-47 |
| Msa0506270 | Msa0825860 | 0.872151 | 3.964621e-67 | -8.615850e-47 |
| Msa0506270 | Msa0833290 | 0.823903 | 1.077832e-53 | -8.615850e-47 |
| Msa0506270 | Msa0845930 | 0.810968 | 8.853419e-51 | -8.615850e-47 |
| Msa0506270 | Msa0846210 | 0.810202 | 1.295711e-50 | -8.615850e-47 |
| Msa0506270 | Msa0846330 | 0.842212 | 2.968734e-58 | -8.615850e-47 |
| Msa0506270 | Msa0846350 | 0.852807 | 3.623156e-61 | -8.615850e-47 |
| Msa0506270 | Msa0854980 | 0.822574 | 2.202086e-53 | -8.615850e-47 |
| Msa0506270 | Msa0858980 | 0.823171 | 1.598901e-53 | -8.615850e-47 |
| Msa0506270 | Msa0865320 | 0.851779 | 7.105721e-61 | -8.615850e-47 |
| Msa0506270 | Msa0885280 | 0.832836 | 7.529553e-56 | -8.615850e-47 |
| Msa0506270 | Msa0885290 | 0.843961 | 1.015242e-58 | -8.615850e-47 |
| Msa0506270 | Msa0888370 | 0.825332 | 4.966635e-54 | -8.615850e-47 |
| Msa0506270 | Msa0888420 | 0.807698 | 4.450436e-50 | -8.615850e-47 |
| Msa0506270 | Msa0899450 | 0.808740 | 2.669180e-50 | -8.615850e-47 |
| Msa0506270 | Msa0907260 | 0.825609 | 4.270520e-54 | -8.615850e-47 |
| Msa0506270 | Msa0914760 | 0.805130 | 1.548336e-49 | -8.615850e-47 |
| Msa0506270 | Msa0954020 | 0.824806 | 6.611319e-54 | -8.615850e-47 |
| Msa0506270 | Msa0954910 | 0.815149 | 1.071885e-51 | -8.615850e-47 |
| Msa0506270 | Msa0956270 | 0.828398 | 9.194316e-55 | -8.615850e-47 |
| Msa0506270 | Msa0957860 | 0.820640 | 6.165074e-53 | -8.615850e-47 |
| Msa0506270 | Msa0957960 | 0.821446 | 4.021112e-53 | -8.615850e-47 |
| Msa0506270 | Msa0981370 | 0.846566 | 2.003842e-59 | -8.615850e-47 |
| Msa0506270 | Msa0989060 | 0.868808 | 4.958961e-66 | -8.615850e-47 |
| Msa0506270 | Msa1016280 | 0.860370 | 2.166056e-63 | -8.615850e-47 |
| Msa0506270 | Msa1023010 | 0.804501 | 2.095343e-49 | -8.615850e-47 |
| Msa0506270 | Msa1024240 | 0.836574 | 8.642819e-57 | -8.615850e-47 |
| Msa0506270 | Msa1025360 | 0.881535 | 2.213680e-70 | -8.615850e-47 |
| Msa0506270 | Msa1025370 | 0.887626 | 1.209313e-72 | -8.615850e-47 |
| Msa0506270 | Msa1030060 | 0.813959 | 1.965735e-51 | -8.615850e-47 |
| Msa0506270 | Msa1044830 | 0.891621 | 3.362194e-74 | -8.615850e-47 |
| Msa0506270 | Msa1044840 | 0.876059 | 1.886502e-68 | -8.615850e-47 |
| Msa0506270 | Msa1057920 | 0.812684 | 3.745939e-51 | -8.615850e-47 |
| Msa0506270 | Msa1060840 | 0.847650 | 1.010870e-59 | -8.615850e-47 |
| Msa0506270 | Msa1087490 | 0.807436 | 5.060329e-50 | -8.615850e-47 |
| Msa0506270 | Msa1092990 | 0.877042 | 8.625482e-69 | -8.615850e-47 |
| Msa0506270 | Msa1099970 | 0.828097 | 1.086161e-54 | -8.615850e-47 |
| Msa0506270 | Msa1100980 | 0.870977 | 9.703362e-67 | -8.615850e-47 |
| Msa0506270 | Msa1109440 | 0.839534 | 1.496177e-57 | -8.615850e-47 |
| Msa0506270 | Msa1112300 | 0.807604 | 4.661188e-50 | -8.615850e-47 |
| Msa0506270 | Msa1114030 | 0.804884 | 1.743756e-49 | -8.615850e-47 |
| Msa0506270 | Msa1121200 | 0.856595 | 2.892480e-62 | -8.615850e-47 |
| Msa0506270 | Msa1121480 | 0.800202 | 1.609858e-48 | -8.615850e-47 |
| Msa0506270 | Msa1135740 | 0.851033 | 1.154993e-60 | -8.615850e-47 |
| Msa0506270 | Msa1136090 | 0.841146 | 5.671615e-58 | -8.615850e-47 |
| Msa0506270 | Msa1137690 | 0.809516 | 1.820349e-50 | -8.615850e-47 |
| Msa0506270 | Msa1146110 | 0.870275 | 1.650146e-66 | -8.615850e-47 |
| Msa0506270 | Msa1148020 | 0.816167 | 6.356658e-52 | -8.615850e-47 |
| Msa0506270 | Msa1149360 | 0.818105 | 2.331697e-52 | -8.615850e-47 |
| Msa0506270 | Msa1150370 | 0.825717 | 4.024459e-54 | -8.615850e-47 |
| Msa0506270 | Msa1160670 | 0.836388 | 9.636018e-57 | -8.615850e-47 |
| Msa0506270 | Msa1160690 | 0.800813 | 1.208527e-48 | -8.615850e-47 |
| Msa0506270 | Msa1173920 | 0.824614 | 7.335213e-54 | -8.615850e-47 |
| Msa0506270 | Msa1182090 | 0.806974 | 6.338804e-50 | -8.615850e-47 |
| Msa0506270 | Msa1187940 | 0.861800 | 7.953668e-64 | -8.615850e-47 |
| Msa0506270 | Msa1187950 | 0.899853 | 1.313495e-77 | -8.615850e-47 |
| Msa0506270 | Msa1192640 | 0.846600 | 1.961221e-59 | -8.615850e-47 |
| Msa0506270 | Msa1230430 | 0.840134 | 1.044177e-57 | -8.615850e-47 |
| Msa0506270 | Msa1246880 | 0.850996 | 1.183075e-60 | -8.615850e-47 |
| Msa0506270 | Msa1269670 | 0.875612 | 2.686572e-68 | -8.615850e-47 |
| Msa0506270 | Msa1270230 | 0.909942 | 3.256479e-82 | -8.615850e-47 |
| Msa0506270 | Msa1270240 | 0.876583 | 1.244038e-68 | -8.615850e-47 |
| Msa0506270 | Msa1270270 | 0.845828 | 3.183715e-59 | -8.615850e-47 |
| Msa0506270 | Msa1273230 | 0.826534 | 2.574125e-54 | -8.615850e-47 |
| Msa0506270 | Msa1283330 | 0.898268 | 6.263976e-77 | -8.615850e-47 |
| Msa0506270 | Msa1285930 | 0.856490 | 3.106473e-62 | -8.615850e-47 |
| Msa0506270 | Msa1287800 | 0.862734 | 4.107858e-64 | -8.615850e-47 |
| Msa0506270 | Msa1287810 | 0.874072 | 8.986780e-68 | -8.615850e-47 |
| Msa0506270 | Msa1289420 | 0.824972 | 6.040401e-54 | -8.615850e-47 |
| Msa0506270 | Msa1289430 | 0.821924 | 3.117736e-53 | -8.615850e-47 |
| Msa0506270 | Msa1297210 | 0.819117 | 1.374656e-52 | -8.615850e-47 |
| Msa0506270 | Msa1307890 | 0.867481 | 1.325970e-65 | -8.615850e-47 |
| Msa0506270 | Msa1314280 | 0.817304 | 3.533976e-52 | -8.615850e-47 |
| Msa0506270 | Msa1320300 | 0.819510 | 1.118531e-52 | -8.615850e-47 |
| Msa0506270 | Msa1321560 | 0.803802 | 2.930244e-49 | -8.615850e-47 |
| Msa0506270 | Msa1340590 | 0.829805 | 4.191973e-55 | -8.615850e-47 |
| Msa0506270 | Msa1342200 | 0.802128 | 6.496931e-49 | -8.615850e-47 |
| Msa0506270 | Msa1369430 | 0.819890 | 9.159684e-53 | -8.615850e-47 |
| Msa0506270 | Msa1382700 | 0.804210 | 2.409543e-49 | -8.615850e-47 |
| Msa0506270 | Msa1386330 | 0.827445 | 1.558263e-54 | -8.615850e-47 |
| Msa0506270 | Msa1397580 | 0.820234 | 7.640662e-53 | -8.615850e-47 |
| Msa0506270 | Msa1402790 | 0.824502 | 7.795903e-54 | -8.615850e-47 |
| Msa0506270 | Msa1404000 | 0.872018 | 4.387603e-67 | -8.615850e-47 |
| Msa0506270 | Msa1408780 | 0.813651 | 2.297482e-51 | -8.615850e-47 |
| Msa0506270 | Msa1415310 | 0.840619 | 7.798470e-58 | -8.615850e-47 |
| Msa0506270 | Msa1422180 | 0.859584 | 3.739778e-63 | -8.615850e-47 |
| Msa0506270 | Msa1433120 | 0.861884 | 7.495073e-64 | -8.615850e-47 |
| Msa0506270 | Msa1451190 | 0.807541 | 4.807341e-50 | -8.615850e-47 |
| Msa0506270 | Msa1451570 | 0.814233 | 1.710192e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506270 | MtrunA17_Chr3g0098461 | 81.132 | 159 | 23 | 1 | 1 | 152 | 1 | 159 | 4.74e-87 | 262 |
| Msa0506270 | MtrunA17_Chr3g0098461 | 68.293 | 123 | 38 | 1 | 197 | 319 | 19 | 140 | 6.91e-51 | 169 |
| Msa0506270 | MtrunA17_Chr3g0098471 | 64.286 | 126 | 15 | 1 | 320 | 415 | 48 | 173 | 6.59e-39 | 139 |
| Msa0506270 | MtrunA17_Chr0c05g0492161 | 56.098 | 123 | 46 | 2 | 1 | 115 | 1 | 123 | 7.40e-38 | 134 |
| Msa0506270 | MtrunA17_Chr0c05g0492161 | 53.247 | 77 | 36 | 0 | 197 | 273 | 19 | 95 | 7.55e-20 | 85.1 |
| Msa0506270 | MtrunA17_Chr4g0038111 | 66.667 | 63 | 21 | 0 | 353 | 415 | 321 | 383 | 1.33e-20 | 94.4 |
| Msa0506270 | MtrunA17_Chr1g0163591 | 48.387 | 62 | 31 | 1 | 355 | 415 | 276 | 337 | 3.11e-13 | 71.6 |
| Msa0506270 | MtrunA17_Chr3g0090311 | 37.864 | 103 | 60 | 4 | 217 | 316 | 42 | 143 | 3.99e-11 | 62.0 |
| Msa0506270 | MtrunA17_Chr3g0090311 | 33.121 | 157 | 88 | 4 | 6 | 146 | 2 | 157 | 6.62e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506270 | AT3G18610.3 | 47.692 | 65 | 33 | 1 | 351 | 415 | 335 | 398 | 8.45e-13 | 70.9 |
| Msa0506270 | AT3G18610.1 | 47.692 | 65 | 33 | 1 | 351 | 415 | 365 | 428 | 8.51e-13 | 70.9 |
| Msa0506270 | AT3G18610.2 | 47.692 | 65 | 33 | 1 | 351 | 415 | 305 | 368 | 9.29e-13 | 70.5 |
| Msa0506270 | AT1G48920.1 | 42.424 | 66 | 36 | 2 | 351 | 415 | 278 | 342 | 4.38e-11 | 65.5 |
Find 108 sgRNAs with CRISPR-Local
Find 529 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAAGGATGGAAAGCTTAA+AGG | 0.173752 | 3_4:+52547983 | Msa0506270:CDS |
| TAAAGATCGTCTTTCTTTAC+AGG | 0.196172 | 3_4:-52547220 | None:intergenic |
| AATGCGTCAGTGTTGGTCTT+TGG | 0.291887 | 3_4:-52541208 | None:intergenic |
| TCATCTTCTGAAGAATCTTC+TGG | 0.335928 | 3_4:+52547247 | Msa0506270:CDS |
| TGTTGACCTATATAAGATTC+TGG | 0.336459 | 3_4:+52540755 | Msa0506270:CDS |
| ACTCCTTCTCTCCGAAAGAT+AGG | 0.337370 | 3_4:-52545292 | None:intergenic |
| TGACGTGGATCTTGAAAGTT+TGG | 0.353226 | 3_4:+52545144 | Msa0506270:CDS |
| TTCTACAACGATGGTGTCCC+CGG | 0.363342 | 3_4:+52540707 | None:intergenic |
| ACTTGTGACCATGGCTGAAA+TGG | 0.368546 | 3_4:+52540974 | Msa0506270:CDS |
| ATTACTCTTCTTCGAAAAGA+TGG | 0.379614 | 3_4:+52541228 | Msa0506270:CDS |
| ATCCATCAGAGTTGGTCTTC+GGG | 0.381778 | 3_4:-52545602 | None:intergenic |
| ATGCGTCAGTGTTGGTCTTT+GGG | 0.387142 | 3_4:-52541207 | None:intergenic |
| GATGGAAAGCTTAAAGGCTT+TGG | 0.397596 | 3_4:+52547989 | Msa0506270:CDS |
| ATTACTCTTCTTCGAAAAGA+TGG | 0.410597 | 3_4:+52545623 | Msa0506270:CDS |
| TGACGTGGATACTCAAAGTT+TGG | 0.414598 | 3_4:+52540794 | Msa0506270:CDS |
| GGCCCTATCTTTCGAAGAAA+AGG | 0.417511 | 3_4:+52540939 | Msa0506270:CDS |
| TCTTCGTTAACCCTATCTTT+CGG | 0.418866 | 3_4:+52545281 | Msa0506270:CDS |
| GTGAAGAGCAATAGTATTGA+TGG | 0.420089 | 3_4:+52541268 | Msa0506270:CDS |
| AATCCATCAGAGTTGGTCTT+CGG | 0.430864 | 3_4:-52545603 | None:intergenic |
| TGTACGTCTTGCTTCTCATA+AGG | 0.432229 | 3_4:+52547967 | Msa0506270:CDS |
| GTGAAGAGCAATTATATTGA+TGG | 0.434863 | 3_4:+52545663 | Msa0506270:CDS |
| AACGATGGTGTCCCCGGGTG+TGG | 0.437378 | 3_4:+52540713 | None:intergenic |
| AGAATCTTATATAGGTCAAC+AGG | 0.439517 | 3_4:-52540753 | None:intergenic |
| GGCTGAAATGGACTTGGAAA+AGG | 0.444198 | 3_4:+52540986 | Msa0506270:CDS |
| CATATCACTTCCCTCTTCGT+TGG | 0.453367 | 3_4:+52540918 | Msa0506270:CDS |
| TGAAAAGGACTTGAGGGATA+AGG | 0.466500 | 3_4:+52545339 | Msa0506270:CDS |
| ACTTGTGGAAAGCGCTGAAA+AGG | 0.467490 | 3_4:+52545324 | Msa0506270:CDS |
| GAACTGAAGCGTACTGGTTA+CGG | 0.472216 | 3_4:+52540894 | Msa0506270:CDS |
| AAAGATAGGGTTAACGAAGA+TGG | 0.472513 | 3_4:-52545278 | None:intergenic |
| TATGTTGGGAACTTATCCTT+CGG | 0.474371 | 3_4:+52547814 | Msa0506270:CDS |
| CTTCGAAAAGATGGGTTATG+AGG | 0.474734 | 3_4:+52541237 | Msa0506270:CDS |
| GGTTACCTTGTCTTTGATGT+TGG | 0.476676 | 3_4:+52540870 | Msa0506270:CDS |
| TCAGAGTTGGTCTTCGGGAC+GGG | 0.477721 | 3_4:-52545597 | None:intergenic |
| GATCTTGAAAGTTTGGAGAA+TGG | 0.482941 | 3_4:+52545151 | Msa0506270:CDS |
| TGCCAAACAAAAGGTATTGA+AGG | 0.484854 | 3_4:+52543205 | Msa0506270:CDS |
| TTACTCTTCTTCGAAAAGAT+GGG | 0.485859 | 3_4:+52545624 | Msa0506270:CDS |
| CGAGGTTGCTGCCAAACAAA+AGG | 0.496709 | 3_4:+52543196 | Msa0506270:CDS |
| AACCCTATCTTTCGGAGAGA+AGG | 0.502877 | 3_4:+52545289 | Msa0506270:CDS |
| GTCAGTGTTGGTCTTTGGGA+TGG | 0.506964 | 3_4:-52541203 | None:intergenic |
| TTACTCTTCTTCGAAAAGAT+GGG | 0.507362 | 3_4:+52541229 | Msa0506270:CDS |
| TTCCAAGTCCATTTCAGCCA+TGG | 0.509729 | 3_4:-52540982 | None:intergenic |
| GACCATGGCTGAAATGGACT+TGG | 0.509783 | 3_4:+52540980 | Msa0506270:CDS |
| CATTCACCAGAATCTTATAT+AGG | 0.510974 | 3_4:-52540761 | None:intergenic |
| GTGTGAAGACATTATATGTT+GGG | 0.513802 | 3_4:+52547800 | Msa0506270:CDS |
| TGACCACAACCATTACTCTT+CGG | 0.514416 | 3_4:-52545247 | None:intergenic |
| CGTGTGAAGACATTATATGT+TGG | 0.515977 | 3_4:+52547799 | Msa0506270:CDS |
| GCGTCTCTTACGACCACACC+CGG | 0.518110 | 3_4:-52540726 | None:intergenic |
| CGACATATTTAAGATTCTCG+TGG | 0.520223 | 3_4:+52545108 | Msa0506270:intron |
| AAGCGCTGAAAAGGACTTGA+GGG | 0.526550 | 3_4:+52545333 | Msa0506270:CDS |
| CGTCTTGCTTCTCATAAGGA+TGG | 0.533795 | 3_4:+52547971 | Msa0506270:CDS |
| GATACTCAAAGTTTGGTGAA+TGG | 0.534335 | 3_4:+52540801 | Msa0506270:CDS |
| AGTGACTTCAAAGAAGCAAA+AGG | 0.536343 | 3_4:+52543169 | Msa0506270:CDS |
| TCAGTGTTGGTCTTTGGGAT+GGG | 0.537407 | 3_4:-52541202 | None:intergenic |
| GTCCCGAAGACCAACTCTGA+TGG | 0.538106 | 3_4:+52545600 | Msa0506270:CDS |
| CGCTACTCGACTTGTGACCA+TGG | 0.544412 | 3_4:+52540965 | Msa0506270:CDS |
| GCAAGCTGAGGAAGAAGTCA+AGG | 0.547712 | 3_4:+52543145 | Msa0506270:CDS |
| TGAAGAGCAATTATATTGAT+GGG | 0.547887 | 3_4:+52545664 | Msa0506270:CDS |
| GAGCAATTATATTGATGGGA+AGG | 0.549182 | 3_4:+52545668 | Msa0506270:CDS |
| AGGAGTCGCTTCTAAACTTG+TGG | 0.551270 | 3_4:+52545309 | Msa0506270:CDS |
| ATCAGAGTTGGTCTTCGGGA+CGG | 0.551912 | 3_4:-52545598 | None:intergenic |
| ATCATGACGAAGAAGCTCAA+GGG | 0.553264 | 3_4:+52541310 | Msa0506270:CDS |
| CTCCTTCTCTCCGAAAGATA+GGG | 0.554373 | 3_4:-52545291 | None:intergenic |
| AAACTTTGAGTATCCACGTC+AGG | 0.555864 | 3_4:-52540792 | None:intergenic |
| GATCGCCAAGACGCTATCCT+CGG | 0.566309 | 3_4:+52545199 | Msa0506270:CDS |
| GCAAGGTGCTGCTTACGTCT+CGG | 0.567387 | 3_4:+52541177 | Msa0506270:intron |
| TCTACAACGATGGTGTCCCC+GGG | 0.568555 | 3_4:+52540708 | None:intergenic |
| GTTGCAGCAGATGATCTCCT+AGG | 0.569948 | 3_4:+52540837 | Msa0506270:intron |
| AGATTCATCAAAGGATTCCT+CGG | 0.570696 | 3_4:-52543243 | None:intergenic |
| AAACTTTCAAGATCCACGTC+AGG | 0.572396 | 3_4:-52545142 | None:intergenic |
| AAAGATGGGTTATGAGGAGG+AGG | 0.574952 | 3_4:+52541243 | Msa0506270:CDS |
| CGAAAAGATGGGGTATGAGA+AGG | 0.577206 | 3_4:+52545635 | Msa0506270:CDS |
| GATGGGTTATGAGGAGGAGG+CGG | 0.578268 | 3_4:+52541246 | Msa0506270:CDS |
| GTTGGTGAACTGAAGCGTAC+TGG | 0.578758 | 3_4:+52540888 | Msa0506270:CDS |
| GAAGAGTAATCCATCAGAGT+TGG | 0.583113 | 3_4:-52545610 | None:intergenic |
| AAAGATAGGGCCAACGAAGA+GGG | 0.584375 | 3_4:-52540928 | None:intergenic |
| ATGCGTTCTGCGGAGACCGA+AGG | 0.587376 | 3_4:+52541340 | Msa0506270:CDS |
| GAAGAGTAATGCGTCAGTGT+TGG | 0.587807 | 3_4:-52541215 | None:intergenic |
| TACTCTTCTTCGAAAAGATG+GGG | 0.590062 | 3_4:+52545625 | Msa0506270:CDS |
| CGTAACCGAGGATAGCGTCT+TGG | 0.592411 | 3_4:-52545204 | None:intergenic |
| TGAAGAGCAATAGTATTGAT+GGG | 0.595651 | 3_4:+52541269 | Msa0506270:CDS |
| AAAACTGCTACCCTAGTCGT+CGG | 0.600371 | 3_4:-52548675 | None:intergenic |
| GAAAGATAGGGCCAACGAAG+AGG | 0.603202 | 3_4:-52540929 | None:intergenic |
| GAACCGAAGAGTAATGGTTG+TGG | 0.611924 | 3_4:+52545244 | Msa0506270:CDS |
| AATCATGACGAAGAAGCTCA+AGG | 0.613048 | 3_4:+52541309 | Msa0506270:CDS |
| GGATTATCTCTTACCTGACG+TGG | 0.613896 | 3_4:+52545129 | Msa0506270:CDS |
| TTTACTTTGATATAGGCAAG+AGG | 0.615439 | 3_4:+52543123 | Msa0506270:intron |
| CACGTCCTCAGATTCATCAA+AGG | 0.616561 | 3_4:-52543252 | None:intergenic |
| GGAATCCTTTGATGAATCTG+AGG | 0.620629 | 3_4:+52543247 | Msa0506270:CDS |
| CGAAAAGATGGGTTATGAGG+AGG | 0.622267 | 3_4:+52541240 | Msa0506270:CDS |
| GGTAACCGAGGATAATGCCT+AGG | 0.623647 | 3_4:-52540854 | None:intergenic |
| GTCGTTGAACCGAAGAGTAA+TGG | 0.627136 | 3_4:+52545238 | Msa0506270:CDS |
| TCATGACGAAGAAGCTCAAG+GGG | 0.629217 | 3_4:+52541311 | Msa0506270:CDS |
| TTGGTGAAGATCTTATGTAA+CGG | 0.629951 | 3_4:+52548709 | Msa0506270:CDS |
| CGTCTCTTACGACCACACCC+GGG | 0.631420 | 3_4:-52540725 | None:intergenic |
| AAAGATGGGGTATGAGAAGG+AGG | 0.631960 | 3_4:+52545638 | Msa0506270:CDS |
| GGTAGTCGAAATTAGTTCCG+AGG | 0.633179 | 3_4:+52543226 | Msa0506270:CDS |
| AAAGCGCTGAAAAGGACTTG+AGG | 0.634334 | 3_4:+52545332 | Msa0506270:CDS |
| GATCTCCTAGGCATTATCCT+CGG | 0.649171 | 3_4:+52540849 | Msa0506270:CDS |
| GTCTCTTACGACCACACCCG+GGG | 0.653034 | 3_4:-52540724 | None:intergenic |
| TGAATCTTCTGATGAAGATG+AGG | 0.655782 | 3_4:+52547270 | Msa0506270:CDS |
| CATCAAAGACAAGGTAACCG+AGG | 0.661196 | 3_4:-52540866 | None:intergenic |
| GGGGAAGCAGATGCGTTCTG+CGG | 0.668612 | 3_4:+52541330 | Msa0506270:CDS |
| TATAGGCAAGAGGCAAGCTG+AGG | 0.681134 | 3_4:+52543133 | Msa0506270:intron |
| GTTCACCAACATCAAAGACA+AGG | 0.681557 | 3_4:-52540875 | None:intergenic |
| GAATGATGTCTTTCCTGACG+TGG | 0.685326 | 3_4:+52540779 | Msa0506270:CDS |
| AAAGAAGCAAAAGGTAGACG+AGG | 0.690556 | 3_4:+52543178 | Msa0506270:CDS |
| CATCAAAGATGACGTAACCG+AGG | 0.714623 | 3_4:-52545216 | None:intergenic |
| TAAGATTCTTCAAGTCATCG+CGG | 0.762237 | 3_4:+52545174 | Msa0506270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAATGTTTAATTAAAAA+GGG | - | chr3_4:52541762-52541781 | None:intergenic | 10.0% |
| !! | ACAAAAATGTTTAATTAAAA+AGG | - | chr3_4:52541763-52541782 | None:intergenic | 10.0% |
| !!! | AATTAAACATTTTTGTTTTA+TGG | + | chr3_4:52541767-52541786 | Msa0506270:intron | 10.0% |
| !! | ATACAATGATATAAAATTAA+GGG | - | chr3_4:52544721-52544740 | None:intergenic | 10.0% |
| !! | AATACAATGATATAAAATTA+AGG | - | chr3_4:52544722-52544741 | None:intergenic | 10.0% |
| !!! | TTTTATATCATTGTATTTAA+TGG | + | chr3_4:52544725-52544744 | Msa0506270:intron | 10.0% |
| !! | GAAAAATATTTAATTAAAAC+GGG | - | chr3_4:52544763-52544782 | None:intergenic | 10.0% |
| !! | TTACAATGATATAAAATAAA+GGG | - | chr3_4:52544942-52544961 | None:intergenic | 10.0% |
| !! | ATTACAATGATATAAAATAA+AGG | - | chr3_4:52544943-52544962 | None:intergenic | 10.0% |
| !! | ATACATTGATATAAAATTAA+GGG | - | chr3_4:52547103-52547122 | None:intergenic | 10.0% |
| !! | AATACATTGATATAAAATTA+AGG | - | chr3_4:52547104-52547123 | None:intergenic | 10.0% |
| !! | ACAAAAATGTTTAATTAAAA+CGG | - | chr3_4:52541763-52541782 | None:intergenic | 10.0% |
| !! | AAATCAATGATATAAAATTA+AGG | - | chr3_4:52547336-52547355 | None:intergenic | 10.0% |
| !! | CAAAAAAGTTTAATTAAAAA+GGG | - | chr3_4:52547376-52547395 | None:intergenic | 10.0% |
| !! | ACAAAAAAGTTTAATTAAAA+AGG | - | chr3_4:52547377-52547396 | None:intergenic | 10.0% |
| !! | TTGTTAAAATCATATATGTT+AGG | + | chr3_4:52541065-52541084 | Msa0506270:intron | 15.0% |
| !! | ATACAATGACATAAAATTAA+GGG | - | chr3_4:52541721-52541740 | None:intergenic | 15.0% |
| !! | AATACAATGACATAAAATTA+AGG | - | chr3_4:52541722-52541741 | None:intergenic | 15.0% |
| !!! | TATTGTTATTGTGATATATA+TGG | - | chr3_4:52542001-52542020 | None:intergenic | 15.0% |
| !! | TTGTTATCTTATAATAAGAA+AGG | - | chr3_4:52542049-52542068 | None:intergenic | 15.0% |
| !! | TACATAATCTTCATATTTAA+TGG | - | chr3_4:52542793-52542812 | None:intergenic | 15.0% |
| !!! | TTGTTTGCATTTTTAATAAT+AGG | + | chr3_4:52543718-52543737 | Msa0506270:intron | 15.0% |
| !! | AATATATAAAAGAATAACTG+GGG | - | chr3_4:52544068-52544087 | None:intergenic | 15.0% |
| !! | CAATATATAAAAGAATAACT+GGG | - | chr3_4:52544069-52544088 | None:intergenic | 15.0% |
| !! | ACAATATATAAAAGAATAAC+TGG | - | chr3_4:52544070-52544089 | None:intergenic | 15.0% |
| !!! | AATTAAATATTTTTCTGTCA+TGG | + | chr3_4:52544768-52544787 | Msa0506270:intron | 15.0% |
| !! | TAGTTAAAATCATATATGTT+AGG | + | chr3_4:52545452-52545471 | Msa0506270:intron | 15.0% |
| !! | AAAATAAACAGCTAAAAAAA+GGG | - | chr3_4:52545798-52545817 | None:intergenic | 15.0% |
| !!! | TTTTATATCAATGTATTTAC+TGG | + | chr3_4:52547107-52547126 | Msa0506270:intron | 15.0% |
| !!! | AATTAAACATTTTTGTATCA+TGG | + | chr3_4:52547150-52547169 | Msa0506270:intron | 15.0% |
| !!! | ATTTTATATCATTGATTTAC+CGG | + | chr3_4:52547338-52547357 | Msa0506270:intron | 15.0% |
| !!! | AATTAAACTTTTTTGTTTCA+TGG | + | chr3_4:52547381-52547400 | Msa0506270:intron | 15.0% |
| !! | TTGAAAAAAGTAACAAATAA+TGG | - | chr3_4:52548310-52548329 | None:intergenic | 15.0% |
| !!! | TATTTGTTACTTTTTTCAAT+AGG | + | chr3_4:52548311-52548330 | Msa0506270:intron | 15.0% |
| !!! | TTTTATGTCATTGTATTTAC+TGG | + | chr3_4:52541725-52541744 | Msa0506270:intron | 20.0% |
| !! | ATATTATATTGTCTAGCTAA+GGG | - | chr3_4:52542731-52542750 | None:intergenic | 20.0% |
| !! | AATATTATATTGTCTAGCTA+AGG | - | chr3_4:52542732-52542751 | None:intergenic | 20.0% |
| !! | TTAATGAGAGAATTAAATCT+TGG | + | chr3_4:52542882-52542901 | Msa0506270:intron | 20.0% |
| !! | TTCACTTATAGATATCTTTA+TGG | + | chr3_4:52542937-52542956 | Msa0506270:intron | 20.0% |
| !! | TAGAACATATTAATCAACTT+CGG | - | chr3_4:52543005-52543024 | None:intergenic | 20.0% |
| !!! | AAGTTGATTAATATGTTCTA+TGG | + | chr3_4:52543005-52543024 | Msa0506270:intron | 20.0% |
| !! | ATTCTGTTATGAATTTAATG+TGG | + | chr3_4:52543294-52543313 | Msa0506270:intron | 20.0% |
| !! | TTACAATAACAAACAAATAC+AGG | - | chr3_4:52543325-52543344 | None:intergenic | 20.0% |
| !! | ATCTTGGAAAAAATTTATTC+TGG | - | chr3_4:52543525-52543544 | None:intergenic | 20.0% |
| !!! | ATAAATTTTTTCCAAGATTG+TGG | + | chr3_4:52543527-52543546 | Msa0506270:intron | 20.0% |
| !! | TAATGGAATCAATACAAATA+AGG | - | chr3_4:52543888-52543907 | None:intergenic | 20.0% |
| !! | ATTAAAAAGGCTTAAATGTA+AGG | - | chr3_4:52543913-52543932 | None:intergenic | 20.0% |
| !! | TTACTGCAACAATATTAAAA+AGG | - | chr3_4:52543926-52543945 | None:intergenic | 20.0% |
| !!! | CATTGTTCTAAAATTCAATT+TGG | + | chr3_4:52544110-52544129 | Msa0506270:intron | 20.0% |
| !! | TAATTAACTTAACTCATTAG+AGG | + | chr3_4:52544197-52544216 | Msa0506270:intron | 20.0% |
| !! | AATTAACTTAACTCATTAGA+GGG | + | chr3_4:52544198-52544217 | Msa0506270:intron | 20.0% |
| !!! | TTTTATATCATTGTAATTGC+TGG | + | chr3_4:52544946-52544965 | Msa0506270:intron | 20.0% |
| !! | AAAATTATGACAGAATCAAT+CGG | - | chr3_4:52545380-52545399 | None:intergenic | 20.0% |
| !! | TTAAAATCATATATGTTAGG+AGG | + | chr3_4:52541068-52541087 | Msa0506270:intron | 20.0% |
| !!! | TGTGTCTTCTTTTAATTTAA+TGG | + | chr3_4:52545503-52545522 | Msa0506270:intron | 20.0% |
| !!! | TTTTAATTTAATGGTGTGAT+TGG | + | chr3_4:52545512-52545531 | Msa0506270:intron | 20.0% |
| !! | AAATAAACAGCTAAAAAAAG+GGG | - | chr3_4:52545797-52545816 | None:intergenic | 20.0% |
| !! | GAAAATAAACAGCTAAAAAA+AGG | - | chr3_4:52545799-52545818 | None:intergenic | 20.0% |
| !!! | GTATGAGATTTTAGTTTTAA+AGG | + | chr3_4:52546155-52546174 | Msa0506270:intron | 20.0% |
| !!! | TGAGTTTTCAACAATAAAAT+TGG | - | chr3_4:52546843-52546862 | None:intergenic | 20.0% |
| !!! | TATTTACTGGTTTTTTAAGA+TGG | + | chr3_4:52547120-52547139 | Msa0506270:intron | 20.0% |
| !!! | TTTTGAAGTTTATTGCATAT+TGG | + | chr3_4:52547302-52547321 | Msa0506270:intron | 20.0% |
| !!! | AAAAGGGAATTTTAAAAAAC+CGG | - | chr3_4:52547360-52547379 | None:intergenic | 20.0% |
| !!! | CTATTACCCTTTTTAATATT+AGG | + | chr3_4:52548133-52548152 | Msa0506270:intron | 20.0% |
| !! | TAAGTGCCTAATATTAAAAA+GGG | - | chr3_4:52548142-52548161 | None:intergenic | 20.0% |
| !! | TTAAGTGCCTAATATTAAAA+AGG | - | chr3_4:52548143-52548162 | None:intergenic | 20.0% |
| !! | AGTAATTACCTGTTATTATT+AGG | - | chr3_4:52548236-52548255 | None:intergenic | 20.0% |
| !! | GTATTAAAAACTTTACTTCA+TGG | + | chr3_4:52548370-52548389 | Msa0506270:intron | 20.0% |
| !! | AAATATTGTTGAAAAACCAT+TGG | - | chr3_4:52548479-52548498 | None:intergenic | 20.0% |
| !!! | AATTTAACTTGTCATTTTTC+AGG | + | chr3_4:52548635-52548654 | Msa0506270:intron | 20.0% |
| !!! | ATTTAACTTGTCATTTTTCA+GGG | + | chr3_4:52548636-52548655 | Msa0506270:intron | 20.0% |
| ! | AAATAAACAGCCAAAAAAGT+GGG | - | chr3_4:52541401-52541420 | None:intergenic | 25.0% |
| ! | AAAATAAACAGCCAAAAAAG+TGG | - | chr3_4:52541402-52541421 | None:intergenic | 25.0% |
| ! | GAAAACAATTGCAACTTTAT+TGG | + | chr3_4:52541437-52541456 | Msa0506270:intron | 25.0% |
| ! | AAGTGAAGTTATTACATCTT+AGG | + | chr3_4:52541636-52541655 | Msa0506270:intron | 25.0% |
| ! | AGTGAAGTTATTACATCTTA+GGG | + | chr3_4:52541637-52541656 | Msa0506270:intron | 25.0% |
| !!! | AAGCTGTTACTTCTAAAATA+AGG | + | chr3_4:52541808-52541827 | Msa0506270:intron | 25.0% |
| ! | GAACCTAACTATTAATTAGT+TGG | + | chr3_4:52541938-52541957 | Msa0506270:intron | 25.0% |
| ! | ACACCAACTAATTAATAGTT+AGG | - | chr3_4:52541944-52541963 | None:intergenic | 25.0% |
| ! | AGAGAGAAAATGAAAGTAAA+AGG | + | chr3_4:52542083-52542102 | Msa0506270:intron | 25.0% |
| ! | CATCATTCAATAAGATTCAA+TGG | - | chr3_4:52542118-52542137 | None:intergenic | 25.0% |
| ! | ACTAATCTAACTAGAGATTA+AGG | + | chr3_4:52542271-52542290 | Msa0506270:intron | 25.0% |
| ! | TGTCTTCAATATCTTTATCT+TGG | + | chr3_4:52542320-52542339 | Msa0506270:intron | 25.0% |
| !! | TATTTCGACTATAATGCTTT+TGG | + | chr3_4:52542351-52542370 | Msa0506270:intron | 25.0% |
| !!! | TATTTAATGGTAGTTCTAAG+AGG | - | chr3_4:52542780-52542799 | None:intergenic | 25.0% |
| ! | TCGGAACATCAAATAAAATT+GGG | - | chr3_4:52542986-52543005 | None:intergenic | 25.0% |
| ! | TTCGGAACATCAAATAAAAT+TGG | - | chr3_4:52542987-52543006 | None:intergenic | 25.0% |
| !!! | GATTTGTCAAACTGATTTTA+TGG | + | chr3_4:52543041-52543060 | Msa0506270:intron | 25.0% |
| !!! | ATGTCCTTATTTTTGTTTAC+TGG | + | chr3_4:52543094-52543113 | Msa0506270:intron | 25.0% |
| !!! | TGTCCTTATTTTTGTTTACT+GGG | + | chr3_4:52543095-52543114 | Msa0506270:intron | 25.0% |
| ! | TAACCCAGTAAACAAAAATA+AGG | - | chr3_4:52543101-52543120 | None:intergenic | 25.0% |
| !!! | GGTTACTTTTACTTTGATAT+AGG | + | chr3_4:52543116-52543135 | Msa0506270:intron | 25.0% |
| ! | TTTCGAAGACAATATATGTT+GGG | + | chr3_4:52543394-52543413 | Msa0506270:intron | 25.0% |
| ! | AATTACCTTCCAATAATAAG+AGG | - | chr3_4:52543830-52543849 | None:intergenic | 25.0% |
| !!! | ATTTTAGAACAATGTTTCTG+AGG | - | chr3_4:52544104-52544123 | None:intergenic | 25.0% |
| ! | GAATCAAAATTCTAATCAGA+AGG | - | chr3_4:52544417-52544436 | None:intergenic | 25.0% |
| !!! | AAGCTGTTTCTTCTAAAATA+GGG | + | chr3_4:52544809-52544828 | Msa0506270:intron | 25.0% |
| !! | TATCTTGCATAACGAATTTT+GGG | - | chr3_4:52545049-52545068 | None:intergenic | 25.0% |
| !! | ATATCTTGCATAACGAATTT+TGG | - | chr3_4:52545050-52545069 | None:intergenic | 25.0% |
| !! | TGATTCTGTCATAATTTTGT+TGG | + | chr3_4:52545382-52545401 | Msa0506270:intron | 25.0% |
| ! | TAACTAACAATAGCAATAAC+AGG | - | chr3_4:52545434-52545453 | None:intergenic | 25.0% |
| ! | TGAAGAGCAATTATATTGAT+GGG | + | chr3_4:52545664-52545683 | Msa0506270:CDS | 25.0% |
| ! | AATAAACAGCTAAAAAAAGG+GGG | - | chr3_4:52545796-52545815 | None:intergenic | 25.0% |
| ! | GAAAACAATTCCAACTTTAT+TGG | + | chr3_4:52545833-52545852 | Msa0506270:intron | 25.0% |
| !! | AGAAAAGTTTTCTATAGTTG+AGG | + | chr3_4:52545878-52545897 | Msa0506270:intron | 25.0% |
| ! | AGTCATTCTATTTATCAGAT+AGG | + | chr3_4:52545902-52545921 | Msa0506270:intron | 25.0% |
| ! | ACCTTGATCATTAAGAAATT+TGG | + | chr3_4:52546056-52546075 | Msa0506270:intron | 25.0% |
| ! | ACCAAATTTCTTAATGATCA+AGG | - | chr3_4:52546060-52546079 | None:intergenic | 25.0% |
| ! | ATCATTAAGAAATTTGGTAG+AGG | + | chr3_4:52546062-52546081 | Msa0506270:intron | 25.0% |
| ! | TCATTAAGAAATTTGGTAGA+GGG | + | chr3_4:52546063-52546082 | Msa0506270:intron | 25.0% |
| !!! | ACTTGTTTTCTGTGATTTTT+CGG | - | chr3_4:52546266-52546285 | None:intergenic | 25.0% |
| !! | AAATCAGACAAGCTTTTATT+TGG | + | chr3_4:52546364-52546383 | Msa0506270:intron | 25.0% |
| !!! | TACTTAGTTTCAAAGCATTT+TGG | + | chr3_4:52546398-52546417 | Msa0506270:intron | 25.0% |
| ! | AGCAACATTATTACATTGAT+AGG | + | chr3_4:52546511-52546530 | Msa0506270:intron | 25.0% |
| ! | TTTGAATTGATCAAATTCTC+CGG | - | chr3_4:52546769-52546788 | None:intergenic | 25.0% |
| ! | AGAACATCAGAAAAAATTTC+CGG | - | chr3_4:52546890-52546909 | None:intergenic | 25.0% |
| ! | TTTCTGATGTTCTTGTTAAT+TGG | + | chr3_4:52546897-52546916 | Msa0506270:intron | 25.0% |
| ! | TTCTGATGTTCTTGTTAATT+GGG | + | chr3_4:52546898-52546917 | Msa0506270:intron | 25.0% |
| !!! | GGTTATTTTGACTTTGATAT+AGG | + | chr3_4:52546919-52546938 | Msa0506270:intron | 25.0% |
| !! | AAAAAGGGTAATAGTCATTT+TGG | - | chr3_4:52548127-52548146 | None:intergenic | 25.0% |
| ! | CATATACTCCTAATAATAAC+AGG | + | chr3_4:52548225-52548244 | Msa0506270:intron | 25.0% |
| ! | GTAGTTAAAAGAAAACTTCT+TGG | - | chr3_4:52548263-52548282 | None:intergenic | 25.0% |
| ! | ATACAACATTAGAAGAAACA+GGG | - | chr3_4:52548354-52548373 | None:intergenic | 25.0% |
| ! | AATACAACATTAGAAGAAAC+AGG | - | chr3_4:52548355-52548374 | None:intergenic | 25.0% |
| ! | AAAAAGAGGAAAATATACCT+TGG | - | chr3_4:52548437-52548456 | None:intergenic | 25.0% |
| AGAATCTTATATAGGTCAAC+AGG | - | chr3_4:52540756-52540775 | None:intergenic | 30.0% | |
| TGTTGACCTATATAAGATTC+TGG | + | chr3_4:52540755-52540774 | Msa0506270:CDS | 30.0% | |
| CATTCACCAGAATCTTATAT+AGG | - | chr3_4:52540764-52540783 | None:intergenic | 30.0% | |
| !! | TGGAAAAGGTTTTGTATGTT+TGG | + | chr3_4:52541000-52541019 | Msa0506270:intron | 30.0% |
| ATTACTCTTCTTCGAAAAGA+TGG | + | chr3_4:52541228-52541247 | Msa0506270:CDS | 30.0% | |
| TTACTCTTCTTCGAAAAGAT+GGG | + | chr3_4:52541229-52541248 | Msa0506270:CDS | 30.0% | |
| !! | TGAAGAGCAATAGTATTGAT+GGG | + | chr3_4:52541269-52541288 | Msa0506270:CDS | 30.0% |
| TGAATAATGATGTGAGTGAA+AGG | + | chr3_4:52541525-52541544 | Msa0506270:intron | 30.0% | |
| AGTTGTGCTTATTACATCTT+AGG | + | chr3_4:52541590-52541609 | Msa0506270:intron | 30.0% | |
| GTTGTGCTTATTACATCTTA+GGG | + | chr3_4:52541591-52541610 | Msa0506270:intron | 30.0% | |
| !! | TTAGGTTCCAACTATTTCTA+TGG | - | chr3_4:52541926-52541945 | None:intergenic | 30.0% |
| TCAAATCATACAACCATTAG+AGG | - | chr3_4:52541976-52541995 | None:intergenic | 30.0% | |
| ! | ATATGTAATTGTCACTTCTG+TGG | + | chr3_4:52542021-52542040 | Msa0506270:intron | 30.0% |
| AACCATCACTCTAACAAATT+AGG | + | chr3_4:52542207-52542226 | Msa0506270:intron | 30.0% | |
| !!! | AATGCTTTTGGTTTGTTTGT+AGG | + | chr3_4:52542363-52542382 | Msa0506270:intron | 30.0% |
| AAATCAAAGCAGAACAGTAA+AGG | - | chr3_4:52542443-52542462 | None:intergenic | 30.0% | |
| ACCAACAAACGTAAATCAAA+AGG | + | chr3_4:52542492-52542511 | Msa0506270:intron | 30.0% | |
| CCAACAAACGTAAATCAAAA+GGG | + | chr3_4:52542493-52542512 | Msa0506270:intron | 30.0% | |
| !! | GATTAGTTTATGAATGCTAG+AGG | - | chr3_4:52542550-52542569 | None:intergenic | 30.0% |
| GACTAAGAAGAATGCTTTAA+GGG | - | chr3_4:52542574-52542593 | None:intergenic | 30.0% | |
| AGACTAAGAAGAATGCTTTA+AGG | - | chr3_4:52542575-52542594 | None:intergenic | 30.0% | |
| ! | GTGATGTTTAAAGCTTGTAT+AGG | - | chr3_4:52542622-52542641 | None:intergenic | 30.0% |
| !! | ATTTTAGTGTCGAGACATTT+AGG | - | chr3_4:52542692-52542711 | None:intergenic | 30.0% |
| GATATCTTTATGGTCTAATG+TGG | + | chr3_4:52542947-52542966 | Msa0506270:intron | 30.0% | |
| GGAACATCAAATAAAATTGG+GGG | - | chr3_4:52542984-52543003 | None:intergenic | 30.0% | |
| CGGAACATCAAATAAAATTG+GGG | - | chr3_4:52542985-52543004 | None:intergenic | 30.0% | |
| TTTACTTTGATATAGGCAAG+AGG | + | chr3_4:52543123-52543142 | Msa0506270:intron | 30.0% | |
| ! | TACCTTCAATACCTTTTGTT+TGG | - | chr3_4:52543210-52543229 | None:intergenic | 30.0% |
| CTTTCGAAGACAATATATGT+TGG | + | chr3_4:52543393-52543412 | Msa0506270:intron | 30.0% | |
| !!! | TTTTTTCCAAGATTGTGGAA+TGG | + | chr3_4:52543532-52543551 | Msa0506270:intron | 30.0% |
| TAATAGGCACTTGATAAGAA+TGG | + | chr3_4:52543734-52543753 | Msa0506270:intron | 30.0% | |
| AATAGGCACTTGATAAGAAT+GGG | + | chr3_4:52543735-52543754 | Msa0506270:intron | 30.0% | |
| ATAATAAGAGGATATCCTTG+AGG | - | chr3_4:52543818-52543837 | None:intergenic | 30.0% | |
| CAAGGATATCCTCTTATTAT+TGG | + | chr3_4:52543818-52543837 | Msa0506270:intron | 30.0% | |
| GATATCCTCTTATTATTGGA+AGG | + | chr3_4:52543822-52543841 | Msa0506270:intron | 30.0% | |
| GGCTTAAATGTAAGGAATAA+TGG | - | chr3_4:52543905-52543924 | None:intergenic | 30.0% | |
| ! | TAGTTTGTCGTCATCAAAAA+GGG | - | chr3_4:52544149-52544168 | None:intergenic | 30.0% |
| !! | TTAGTTTGTCGTCATCAAAA+AGG | - | chr3_4:52544150-52544169 | None:intergenic | 30.0% |
| !! | TTGATTCTGAAGTTCTTCTT+AGG | + | chr3_4:52544430-52544449 | Msa0506270:intron | 30.0% |
| !! | TGATTCTGAAGTTCTTCTTA+GGG | + | chr3_4:52544431-52544450 | Msa0506270:intron | 30.0% |
| GGCAAAGAGAATTTAAGAAT+TGG | + | chr3_4:52544519-52544538 | Msa0506270:intron | 30.0% | |
| TATCAGATTCAGGAAGATAT+AGG | - | chr3_4:52544611-52544630 | None:intergenic | 30.0% | |
| TTAGGTAGAAGTTTGACATT+TGG | + | chr3_4:52544645-52544664 | Msa0506270:intron | 30.0% | |
| TTTGACATTTGGAAATCCAT+AGG | + | chr3_4:52544656-52544675 | Msa0506270:intron | 30.0% | |
| !! | GAAGCTGTTTCTTCTAAAAT+AGG | + | chr3_4:52544808-52544827 | Msa0506270:intron | 30.0% |
| !! | TCATTTTGTTTCATCTAGTG+AGG | + | chr3_4:52544858-52544877 | Msa0506270:intron | 30.0% |
| ACAAATCATACAACCATTAG+AGG | - | chr3_4:52544995-52545014 | None:intergenic | 30.0% | |
| TTTGTTTCATCTATGAAGTC+TGG | + | chr3_4:52545010-52545029 | Msa0506270:intron | 30.0% | |
| !! | CTGTCATAATTTTGTTGGTT+TGG | + | chr3_4:52545387-52545406 | Msa0506270:intron | 30.0% |
| ATTACTCTTCTTCGAAAAGA+TGG | + | chr3_4:52541228-52541247 | Msa0506270:CDS | 30.0% | |
| TTACTCTTCTTCGAAAAGAT+GGG | + | chr3_4:52541229-52541248 | Msa0506270:CDS | 30.0% | |
| GTGAAGAGCAATTATATTGA+TGG | + | chr3_4:52545663-52545682 | Msa0506270:CDS | 30.0% | |
| ATCAAACTAGCCAATAAAGT+TGG | - | chr3_4:52545846-52545865 | None:intergenic | 30.0% | |
| ! | GCTAAAATGCTTGTCTTTTT+GGG | - | chr3_4:52545949-52545968 | None:intergenic | 30.0% |
| ! | TGCTAAAATGCTTGTCTTTT+TGG | - | chr3_4:52545950-52545969 | None:intergenic | 30.0% |
| AATCCAAGTAAAACGTGAAA+AGG | + | chr3_4:52546181-52546200 | Msa0506270:intron | 30.0% | |
| TAACCACATGACAATTCAAT+AGG | + | chr3_4:52546232-52546251 | Msa0506270:intron | 30.0% | |
| ! | TTGTTTTCTGTGATTTTTCG+GGG | - | chr3_4:52546264-52546283 | None:intergenic | 30.0% |
| !! | CTTGTTTTCTGTGATTTTTC+GGG | - | chr3_4:52546265-52546284 | None:intergenic | 30.0% |
| AATCACAGAAAACAAGTTCA+AGG | + | chr3_4:52546269-52546288 | Msa0506270:intron | 30.0% | |
| ATCACAGAAAACAAGTTCAA+GGG | + | chr3_4:52546270-52546289 | Msa0506270:intron | 30.0% | |
| CGAAACTGTAAACTAGAAAA+CGG | + | chr3_4:52546536-52546555 | Msa0506270:intron | 30.0% | |
| GAAACTGTAAACTAGAAAAC+GGG | + | chr3_4:52546537-52546556 | Msa0506270:intron | 30.0% | |
| ! | AGGATATAAAGATTTTGTCG+TGG | - | chr3_4:52546800-52546819 | None:intergenic | 30.0% |
| CAACAATAAAATTGGAGAAG+TGG | - | chr3_4:52546835-52546854 | None:intergenic | 30.0% | |
| AGTTTCTTCAAAGAAGCAAA+AGG | + | chr3_4:52546972-52546991 | Msa0506270:intron | 30.0% | |
| ! | TACCTTCAATACCTTTTGTT+TGG | - | chr3_4:52543210-52543229 | None:intergenic | 30.0% |
| AAAGTTGTTCCATCCAAAAA+TGG | + | chr3_4:52547190-52547209 | Msa0506270:CDS | 30.0% | |
| AAGTTGTTCCATCCAAAAAT+GGG | + | chr3_4:52547191-52547210 | Msa0506270:CDS | 30.0% | |
| TAAAGATCGTCTTTCTTTAC+AGG | - | chr3_4:52547223-52547242 | None:intergenic | 30.0% | |
| AGAGTTAGAAGGTTACAATA+TGG | - | chr3_4:52547537-52547556 | None:intergenic | 30.0% | |
| TATTGTAACCTTCTAACTCT+TGG | + | chr3_4:52547537-52547556 | Msa0506270:intron | 30.0% | |
| GGACATATATTGAAATGTTG+AGG | - | chr3_4:52547579-52547598 | None:intergenic | 30.0% | |
| GTGTGAAGACATTATATGTT+GGG | + | chr3_4:52547800-52547819 | Msa0506270:CDS | 30.0% | |
| TTTACTCATCATGTGATTCT+TGG | + | chr3_4:52547863-52547882 | Msa0506270:intron | 30.0% | |
| GAAAAATTCTTCCAAGATTG+TGG | + | chr3_4:52547932-52547951 | Msa0506270:CDS | 30.0% | |
| !! | CAATTACTTTTCCACAATCT+TGG | - | chr3_4:52547946-52547965 | None:intergenic | 30.0% |
| ! | TTGACATCTTTTCAACTTTG+TGG | + | chr3_4:52548057-52548076 | Msa0506270:intron | 30.0% |
| TATTAGGCACTTAAGATGAA+TGG | + | chr3_4:52548149-52548168 | Msa0506270:intron | 30.0% | |
| ATTAGGCACTTAAGATGAAT+GGG | + | chr3_4:52548150-52548169 | Msa0506270:intron | 30.0% | |
| ! | ACAAATAATGGAATCGAAAC+AGG | - | chr3_4:52548298-52548317 | None:intergenic | 30.0% |
| AGGAAAATATACCTTGGTAT+AGG | - | chr3_4:52548431-52548450 | None:intergenic | 30.0% | |
| TGAACAACTTCTTGATGAAT+AGG | + | chr3_4:52548501-52548520 | Msa0506270:intron | 30.0% | |
| GAACAACTTCTTGATGAATA+GGG | + | chr3_4:52548502-52548521 | Msa0506270:intron | 30.0% | |
| ! | GATACTCAAAGTTTGGTGAA+TGG | + | chr3_4:52540801-52540820 | Msa0506270:CDS | 35.0% |
| ! | GTCCTTTTCTTCGAAAGATA+GGG | - | chr3_4:52540944-52540963 | None:intergenic | 35.0% |
| ! | TGTCCTTTTCTTCGAAAGAT+AGG | - | chr3_4:52540945-52540964 | None:intergenic | 35.0% |
| ! | ACAAGCGTGTCTTCTTTTAA+TGG | + | chr3_4:52541108-52541127 | Msa0506270:intron | 35.0% |
| ! | GGTTGGTGTAGTCTTTAATA+TGG | + | chr3_4:52541134-52541153 | Msa0506270:intron | 35.0% |
| ! | GTGAAGAGCAATAGTATTGA+TGG | + | chr3_4:52541268-52541287 | Msa0506270:CDS | 35.0% |
| TGTAATAACTTCACTTCACG+AGG | - | chr3_4:52541632-52541651 | None:intergenic | 35.0% | |
| TCTAATACCTCATCTTCATC+AGG | - | chr3_4:52541668-52541687 | None:intergenic | 35.0% | |
| AGAACTATCAGCTTTCTTTG+CGG | - | chr3_4:52541841-52541860 | None:intergenic | 35.0% | |
| TGAATCTTCTGATGAAGATG+AGG | + | chr3_4:52541875-52541894 | Msa0506270:intron | 35.0% | |
| ATTTCTATGGCTGCTATGAA+AGG | - | chr3_4:52541913-52541932 | None:intergenic | 35.0% | |
| ATAGCAGCCATAGAAATAGT+TGG | + | chr3_4:52541916-52541935 | Msa0506270:intron | 35.0% | |
| ! | GTGTTTTGTGATACCTCTAA+TGG | + | chr3_4:52541960-52541979 | Msa0506270:intron | 35.0% |
| !! | CTCCTAATTTGTTAGAGTGA+TGG | - | chr3_4:52542212-52542231 | None:intergenic | 35.0% |
| GTCATCAAAGTAATTACAGC+TGG | + | chr3_4:52542241-52542260 | Msa0506270:intron | 35.0% | |
| CTTAGCACACTAATAGTTGT+TGG | - | chr3_4:52542300-52542319 | None:intergenic | 35.0% | |
| !!! | CCCTTTTGATTTACGTTTGT+TGG | - | chr3_4:52542496-52542515 | None:intergenic | 35.0% |
| GGAAATGTATTCGTACATGT+TGG | - | chr3_4:52542601-52542620 | None:intergenic | 35.0% | |
| ! | GACATTTAGGATGAGAGAAA+AGG | - | chr3_4:52542679-52542698 | None:intergenic | 35.0% |
| !!! | CAGTTTTTTTACACTGAGCT+TGG | + | chr3_4:52542829-52542848 | Msa0506270:intron | 35.0% |
| !!! | TTTTTTACACTGAGCTTGGT+TGG | + | chr3_4:52542833-52542852 | Msa0506270:intron | 35.0% |
| AGTGACTTCAAAGAAGCAAA+AGG | + | chr3_4:52543169-52543188 | Msa0506270:CDS | 35.0% | |
| !! | TGCCAAACAAAAGGTATTGA+AGG | + | chr3_4:52543205-52543224 | Msa0506270:CDS | 35.0% |
| AGATTCATCAAAGGATTCCT+CGG | - | chr3_4:52543246-52543265 | None:intergenic | 35.0% | |
| TGTTGGGAACTTATCATTCA+AGG | + | chr3_4:52543410-52543429 | Msa0506270:intron | 35.0% | |
| TTTCTCACTCATGTGATTCT+TGG | + | chr3_4:52543458-52543477 | Msa0506270:intron | 35.0% | |
| ATGGTTGTTGATGTATGTCT+TGG | + | chr3_4:52543551-52543570 | Msa0506270:intron | 35.0% | |
| GTTGATGTATGTCTTGGTTA+TGG | + | chr3_4:52543557-52543576 | Msa0506270:intron | 35.0% | |
| ! | TCGACATCTTTTCAACTTTG+TGG | + | chr3_4:52543652-52543671 | Msa0506270:intron | 35.0% |
| ATAGGCACTTGATAAGAATG+GGG | + | chr3_4:52543736-52543755 | Msa0506270:intron | 35.0% | |
| TAAGAATGGGGAAAAACTGT+TGG | + | chr3_4:52543748-52543767 | Msa0506270:intron | 35.0% | |
| !! | TTTTGGTAAGAGTAATGGAG+AGG | + | chr3_4:52543985-52544004 | Msa0506270:intron | 35.0% |
| ACTTAACCGCCTTAGATTTA+GGG | - | chr3_4:52544241-52544260 | None:intergenic | 35.0% | |
| TACTTAACCGCCTTAGATTT+AGG | - | chr3_4:52544242-52544261 | None:intergenic | 35.0% | |
| GCAGTTAAATTCAGATTCTG+TGG | + | chr3_4:52544339-52544358 | Msa0506270:intron | 35.0% | |
| !! | GATTCTGAAGTTCTTCTTAG+GGG | + | chr3_4:52544432-52544451 | Msa0506270:intron | 35.0% |
| ! | ATGAAGCATTCATGTGTTCT+TGG | + | chr3_4:52544498-52544517 | Msa0506270:intron | 35.0% |
| ! | CATTTCCTTTGTAGTTTGTG+TGG | - | chr3_4:52544549-52544568 | None:intergenic | 35.0% |
| TTCAGGAAGATATAGGAGAT+TGG | - | chr3_4:52544604-52544623 | None:intergenic | 35.0% | |
| TATCTTCCTGAATCTGATAG+AGG | + | chr3_4:52544612-52544631 | Msa0506270:intron | 35.0% | |
| TCAAACTTCTACCTAATCAG+GGG | - | chr3_4:52544641-52544660 | None:intergenic | 35.0% | |
| GTCAAACTTCTACCTAATCA+GGG | - | chr3_4:52544642-52544661 | None:intergenic | 35.0% | |
| TGTCAAACTTCTACCTAATC+AGG | - | chr3_4:52544643-52544662 | None:intergenic | 35.0% | |
| !! | AAATCCATAGGAGTATCAAC+TGG | + | chr3_4:52544668-52544687 | Msa0506270:intron | 35.0% |
| ! | TGAATATCCGCTTTCTTTTC+AGG | - | chr3_4:52544841-52544860 | None:intergenic | 35.0% |
| ! | CGACATATTTAAGATTCTCG+TGG | + | chr3_4:52545108-52545127 | Msa0506270:intron | 35.0% |
| GATCTTGAAAGTTTGGAGAA+TGG | + | chr3_4:52545151-52545170 | Msa0506270:CDS | 35.0% | |
| TAAGATTCTTCAAGTCATCG+CGG | + | chr3_4:52545174-52545193 | Msa0506270:CDS | 35.0% | |
| AAAGATAGGGTTAACGAAGA+TGG | - | chr3_4:52545281-52545300 | None:intergenic | 35.0% | |
| TCTTCGTTAACCCTATCTTT+CGG | + | chr3_4:52545281-52545300 | Msa0506270:CDS | 35.0% | |
| GATTGGTGTAGTCTGTAATA+TGG | + | chr3_4:52545529-52545548 | Msa0506270:intron | 35.0% | |
| TACTCTTCTTCGAAAAGATG+GGG | + | chr3_4:52541230-52541249 | Msa0506270:CDS | 35.0% | |
| GAGCAATTATATTGATGGGA+AGG | + | chr3_4:52545668-52545687 | Msa0506270:CDS | 35.0% | |
| ATTAAAGTTGCCCAATCTGA+TGG | - | chr3_4:52546102-52546121 | None:intergenic | 35.0% | |
| ! | ATGCCTTTTCACGTTTTACT+TGG | - | chr3_4:52546187-52546206 | None:intergenic | 35.0% |
| TCACAGAAAACAAGTTCAAG+GGG | + | chr3_4:52546271-52546290 | Msa0506270:intron | 35.0% | |
| !!! | TTTTGGAGTACGTCATAATG+AGG | + | chr3_4:52546415-52546434 | Msa0506270:intron | 35.0% |
| GATTGCCATATGCTATACAA+AGG | + | chr3_4:52546452-52546471 | Msa0506270:intron | 35.0% | |
| GTTCACCTTTGTATAGCATA+TGG | - | chr3_4:52546460-52546479 | None:intergenic | 35.0% | |
| GTGAACAAGAGTTGTTTGTA+GGG | + | chr3_4:52546474-52546493 | Msa0506270:intron | 35.0% | |
| !! | TGTTTGTTGTTTGCTTAGAG+AGG | - | chr3_4:52546684-52546703 | None:intergenic | 35.0% |
| ! | TAAAGATTTTGTCGTGGAGA+TGG | - | chr3_4:52546794-52546813 | None:intergenic | 35.0% |
| TTGACTTTGATATAGGCAAG+AGG | + | chr3_4:52546926-52546945 | Msa0506270:intron | 35.0% | |
| AAAGAAGCAAAAGGTAGATG+AGG | + | chr3_4:52546981-52547000 | Msa0506270:intron | 35.0% | |
| !! | TGCCAAACAAAAGGTATTGA+AGG | + | chr3_4:52543205-52543224 | Msa0506270:CDS | 35.0% |
| ! | ATGGAACAACTTTTGTTGCA+GGG | - | chr3_4:52547183-52547202 | None:intergenic | 35.0% |
| ! | TCATCTTCTGAAGAATCTTC+TGG | + | chr3_4:52547247-52547266 | Msa0506270:CDS | 35.0% |
| TGAATCTTCTGATGAAGATG+AGG | + | chr3_4:52541875-52541894 | Msa0506270:intron | 35.0% | |
| GAAGTTGTTCCTTCCAAAAT+AGG | + | chr3_4:52547421-52547440 | Msa0506270:intron | 35.0% | |
| TACAATATGGCTGATATGGA+AGG | - | chr3_4:52547524-52547543 | None:intergenic | 35.0% | |
| AGGTTACAATATGGCTGATA+TGG | - | chr3_4:52547528-52547547 | None:intergenic | 35.0% | |
| ATATGTCCTACATTCATTCG+TGG | + | chr3_4:52547591-52547610 | Msa0506270:intron | 35.0% | |
| TATGTCCTACATTCATTCGT+GGG | + | chr3_4:52547592-52547611 | Msa0506270:intron | 35.0% | |
| ATATGGTCTTCAACCCATTA+GGG | - | chr3_4:52547621-52547640 | None:intergenic | 35.0% | |
| !! | GATATGCCTTATTTGCAAGA+TGG | - | chr3_4:52547655-52547674 | None:intergenic | 35.0% |
| AGAAGTTGCAATCACGTTAA+GGG | - | chr3_4:52547706-52547725 | None:intergenic | 35.0% | |
| AAGAAGTTGCAATCACGTTA+AGG | - | chr3_4:52547707-52547726 | None:intergenic | 35.0% | |
| !!! | TTTTGTGTAGCAGGAGTATT+AGG | - | chr3_4:52547769-52547788 | None:intergenic | 35.0% |
| CGTGTGAAGACATTATATGT+TGG | + | chr3_4:52547799-52547818 | Msa0506270:CDS | 35.0% | |
| TATGTTGGGAACTTATCCTT+CGG | + | chr3_4:52547814-52547833 | Msa0506270:CDS | 35.0% | |
| CATAAGGATGGAAAGCTTAA+AGG | + | chr3_4:52547983-52548002 | Msa0506270:CDS | 35.0% | |
| ATGTCAAGAGCTTACGTATT+GGG | - | chr3_4:52548044-52548063 | None:intergenic | 35.0% | |
| ! | TTACTTCATGGACTGTTTAC+AGG | + | chr3_4:52548382-52548401 | Msa0506270:intron | 35.0% |
| CATAGTACAACAGCAAAAAG+AGG | - | chr3_4:52548451-52548470 | None:intergenic | 35.0% | |
| !!! | GCAGTTTTTTTGCTCAGTTT+TGG | + | chr3_4:52548690-52548709 | Msa0506270:CDS | 35.0% |
| AAACTTTGAGTATCCACGTC+AGG | - | chr3_4:52540795-52540814 | None:intergenic | 40.0% | |
| TGACGTGGATACTCAAAGTT+TGG | + | chr3_4:52540794-52540813 | Msa0506270:CDS | 40.0% | |
| GGTTACCTTGTCTTTGATGT+TGG | + | chr3_4:52540870-52540889 | Msa0506270:CDS | 40.0% | |
| GTTCACCAACATCAAAGACA+AGG | - | chr3_4:52540878-52540897 | None:intergenic | 40.0% | |
| CTGTTACTGTGTTTGTAGCA+AGG | + | chr3_4:52541160-52541179 | Msa0506270:intron | 40.0% | |
| !! | CTTCGAAAAGATGGGTTATG+AGG | + | chr3_4:52541237-52541256 | Msa0506270:CDS | 40.0% |
| AATCATGACGAAGAAGCTCA+AGG | + | chr3_4:52541309-52541328 | Msa0506270:CDS | 40.0% | |
| ATCATGACGAAGAAGCTCAA+GGG | + | chr3_4:52541310-52541329 | Msa0506270:CDS | 40.0% | |
| ! | AGTGCCTTTTGCATTACCTT+CGG | - | chr3_4:52541359-52541378 | None:intergenic | 40.0% |
| AGCCAAAAAAGTGGGCAAAT+CGG | - | chr3_4:52541393-52541412 | None:intergenic | 40.0% | |
| TTCACAGGAGAAACAACAAC+AGG | - | chr3_4:52542400-52542419 | None:intergenic | 40.0% | |
| CCTGTGAAGTCTGTAATGAA+CGG | + | chr3_4:52542412-52542431 | Msa0506270:intron | 40.0% | |
| AAAGAAGCAAAAGGTAGACG+AGG | + | chr3_4:52543178-52543197 | Msa0506270:CDS | 40.0% | |
| GGAATCCTTTGATGAATCTG+AGG | + | chr3_4:52543247-52543266 | Msa0506270:CDS | 40.0% | |
| CAACAACCATTCCACAATCT+TGG | - | chr3_4:52543541-52543560 | None:intergenic | 40.0% | |
| GGTAAGAGAAAAAAGCCACT+AGG | + | chr3_4:52543578-52543597 | Msa0506270:intron | 40.0% | |
| ! | TGTTGAGTTTGAAACTGCAG+AGG | + | chr3_4:52543610-52543629 | Msa0506270:intron | 40.0% |
| AGAGGATATCCTTGAGGATA+TGG | - | chr3_4:52543812-52543831 | None:intergenic | 40.0% | |
| AGTAACAACTCAGCTGAAAG+TGG | + | chr3_4:52543941-52543960 | Msa0506270:intron | 40.0% | |
| !! | AGGGGTTTTGGTAAGAGTAA+TGG | + | chr3_4:52543980-52543999 | Msa0506270:intron | 40.0% |
| ! | TAAGAGTAATGGAGAGGATG+AGG | + | chr3_4:52543991-52544010 | Msa0506270:intron | 40.0% |
| TCATTGTGCATGAGCTGAAA+GGG | - | chr3_4:52544030-52544049 | None:intergenic | 40.0% | |
| ATCATTGTGCATGAGCTGAA+AGG | - | chr3_4:52544031-52544050 | None:intergenic | 40.0% | |
| TTAACCGCCTTAGATTTAGG+GGG | - | chr3_4:52544239-52544258 | None:intergenic | 40.0% | |
| CTTAACCGCCTTAGATTTAG+GGG | - | chr3_4:52544240-52544259 | None:intergenic | 40.0% | |
| GCTTACCACACAAACTACAA+AGG | + | chr3_4:52544541-52544560 | Msa0506270:intron | 40.0% | |
| GGAAGATATAGGAGATTGGT+TGG | - | chr3_4:52544600-52544619 | None:intergenic | 40.0% | |
| CAAACTTCTACCTAATCAGG+GGG | - | chr3_4:52544640-52544659 | None:intergenic | 40.0% | |
| AAGAAACAGCTTCTGCTTCA+GGG | - | chr3_4:52544801-52544820 | None:intergenic | 40.0% | |
| GGAATCTTCTGATGAAGATG+AGG | + | chr3_4:52544879-52544898 | Msa0506270:intron | 40.0% | |
| !! | CCATTAGAGGTATCACTAGA+TGG | - | chr3_4:52544982-52545001 | None:intergenic | 40.0% |
| CCATCTAGTGATACCTCTAA+TGG | + | chr3_4:52544979-52544998 | Msa0506270:intron | 40.0% | |
| TTCATCTATGAAGTCTGGAG+CGG | + | chr3_4:52545015-52545034 | Msa0506270:intron | 40.0% | |
| TTATGCAAGATATGTGTCCC+CGG | + | chr3_4:52545057-52545076 | Msa0506270:intron | 40.0% | |
| AAACTTTCAAGATCCACGTC+AGG | - | chr3_4:52545145-52545164 | None:intergenic | 40.0% | |
| TGACGTGGATCTTGAAAGTT+TGG | + | chr3_4:52545144-52545163 | Msa0506270:CDS | 40.0% | |
| TGACCACAACCATTACTCTT+CGG | - | chr3_4:52545250-52545269 | None:intergenic | 40.0% | |
| TGAAAAGGACTTGAGGGATA+AGG | + | chr3_4:52545339-52545358 | Msa0506270:CDS | 40.0% | |
| CTTGCTACTAACACAGTAAC+AGG | - | chr3_4:52545557-52545576 | None:intergenic | 40.0% | |
| CTGTTACTGTGTTAGTAGCA+AGG | + | chr3_4:52545555-52545574 | Msa0506270:intron | 40.0% | |
| !! | AATCCATCAGAGTTGGTCTT+CGG | - | chr3_4:52545606-52545625 | None:intergenic | 40.0% |
| GAAGAGTAATCCATCAGAGT+TGG | - | chr3_4:52545613-52545632 | None:intergenic | 40.0% | |
| GAGACTGAAGGTAATGCAAA+AGG | + | chr3_4:52545747-52545766 | Msa0506270:intron | 40.0% | |
| !! | AAGACAAGCATTTTAGCACG+AGG | + | chr3_4:52545952-52545971 | Msa0506270:intron | 40.0% |
| CATAGGCACATTGTTGAAAC+TGG | - | chr3_4:52545991-52546010 | None:intergenic | 40.0% | |
| TGCCTATGCATTCTTTCAAC+TGG | + | chr3_4:52546003-52546022 | Msa0506270:intron | 40.0% | |
| GACCAGTTGAAAGAATGCAT+AGG | - | chr3_4:52546008-52546027 | None:intergenic | 40.0% | |
| CCTCACACACATCATAAAAG+TGG | - | chr3_4:52546030-52546049 | None:intergenic | 40.0% | |
| !! | CCACTTTTATGATGTGTGTG+AGG | + | chr3_4:52546027-52546046 | Msa0506270:intron | 40.0% |
| ACAATTCACCACCATCAGAT+TGG | + | chr3_4:52546088-52546107 | Msa0506270:intron | 40.0% | |
| CAATTCACCACCATCAGATT+GGG | + | chr3_4:52546089-52546108 | Msa0506270:intron | 40.0% | |
| GCACCTATTGAATTGTCATG+TGG | - | chr3_4:52546238-52546257 | None:intergenic | 40.0% | |
| CATGACAATTCAATAGGTGC+AGG | + | chr3_4:52546238-52546257 | Msa0506270:intron | 40.0% | |
| ACAGTAGTAGAGTCAGATGA+GGG | + | chr3_4:52546304-52546323 | Msa0506270:intron | 40.0% | |
| GTTGTCTTGGTTAAACCCAT+AGG | - | chr3_4:52546333-52546352 | None:intergenic | 40.0% | |
| TTTCGCTCTTCATGTTGTCT+TGG | - | chr3_4:52546346-52546365 | None:intergenic | 40.0% | |
| TGTATAGCATATGGCAATCG+TGG | - | chr3_4:52546451-52546470 | None:intergenic | 40.0% | |
| GGTGAACAAGAGTTGTTTGT+AGG | + | chr3_4:52546473-52546492 | Msa0506270:intron | 40.0% | |
| !!! | TTTTGTTTTGCTGCTGCAGA+GGG | - | chr3_4:52546592-52546611 | None:intergenic | 40.0% |
| ! | TGAATGGCATTGGAATCCAA+AGG | - | chr3_4:52546733-52546752 | None:intergenic | 40.0% |
| GTCTGTTCTATGAATGGCAT+TGG | - | chr3_4:52546743-52546762 | None:intergenic | 40.0% | |
| CATTCATAGAACAGACAAGC+CGG | + | chr3_4:52546747-52546766 | Msa0506270:intron | 40.0% | |
| GGTAGTCAAAATTAGTTCGC+AGG | + | chr3_4:52547029-52547048 | Msa0506270:intron | 40.0% | |
| GGAATCCTTTCATGAATCTG+AGG | + | chr3_4:52547050-52547069 | Msa0506270:intron | 40.0% | |
| CACATCCTCAGATTCATGAA+AGG | - | chr3_4:52547058-52547077 | None:intergenic | 40.0% | |
| CTTTCATGAATCTGAGGATG+TGG | + | chr3_4:52547056-52547075 | Msa0506270:intron | 40.0% | |
| ! | GATGGAACAACTTTTGTTGC+AGG | - | chr3_4:52547184-52547203 | None:intergenic | 40.0% |
| AGAACTATCAGCCTTCTTTG+CGG | - | chr3_4:52547455-52547474 | None:intergenic | 40.0% | |
| CAGAAGATTCGTCAGATTCT+TGG | - | chr3_4:52547480-52547499 | None:intergenic | 40.0% | |
| CAAGAATCTGACGAATCTTC+TGG | + | chr3_4:52547478-52547497 | Msa0506270:intron | 40.0% | |
| GTAACCTTCTAACTCTTGGT+TGG | + | chr3_4:52547541-52547560 | Msa0506270:intron | 40.0% | |
| AACACCAACCAAGAGTTAGA+AGG | - | chr3_4:52547548-52547567 | None:intergenic | 40.0% | |
| TATGGTCTTCAACCCATTAG+GGG | - | chr3_4:52547620-52547639 | None:intergenic | 40.0% | |
| GATATGGTCTTCAACCCATT+AGG | - | chr3_4:52547622-52547641 | None:intergenic | 40.0% | |
| AGATGGAAGACCTGTTGATA+TGG | - | chr3_4:52547638-52547657 | None:intergenic | 40.0% | |
| GGTCTTCCATCTTGCAAATA+AGG | + | chr3_4:52547646-52547665 | Msa0506270:intron | 40.0% | |
| ! | CTGTTCACATTTTGTGTAGC+AGG | - | chr3_4:52547778-52547797 | None:intergenic | 40.0% |
| TGTACGTCTTGCTTCTCATA+AGG | + | chr3_4:52547967-52547986 | Msa0506270:CDS | 40.0% | |
| GATGGAAAGCTTAAAGGCTT+TGG | + | chr3_4:52547989-52548008 | Msa0506270:CDS | 40.0% | |
| GATGTCAAGAGCTTACGTAT+TGG | - | chr3_4:52548045-52548064 | None:intergenic | 40.0% | |
| ACTCTTGTCTATTGTGTCGA+AGG | + | chr3_4:52548091-52548110 | Msa0506270:intron | 40.0% | |
| TAATGGAATCGAAACAGGTG+AGG | - | chr3_4:52548293-52548312 | None:intergenic | 40.0% | |
| TATAAACCAGGCCTATACCA+AGG | + | chr3_4:52548417-52548436 | Msa0506270:intron | 40.0% | |
| AATATACCTTGGTATAGGCC+TGG | - | chr3_4:52548426-52548445 | None:intergenic | 40.0% | |
| GTTGTACTATGTTCTGCCAA+TGG | + | chr3_4:52548460-52548479 | Msa0506270:intron | 40.0% | |
| ! | ATACATTGTTGCTTCAAGCG+TGG | + | chr3_4:52548596-52548615 | Msa0506270:intron | 40.0% |
| GAATGATGTCTTTCCTGACG+TGG | + | chr3_4:52540779-52540798 | Msa0506270:CDS | 45.0% | |
| GATCTCCTAGGCATTATCCT+CGG | + | chr3_4:52540849-52540868 | Msa0506270:CDS | 45.0% | |
| CATCAAAGACAAGGTAACCG+AGG | - | chr3_4:52540869-52540888 | None:intergenic | 45.0% | |
| !! | GAACTGAAGCGTACTGGTTA+CGG | + | chr3_4:52540894-52540913 | Msa0506270:CDS | 45.0% |
| CATATCACTTCCCTCTTCGT+TGG | + | chr3_4:52540918-52540937 | Msa0506270:CDS | 45.0% | |
| AAAGATAGGGCCAACGAAGA+GGG | - | chr3_4:52540931-52540950 | None:intergenic | 45.0% | |
| GGCCCTATCTTTCGAAGAAA+AGG | + | chr3_4:52540939-52540958 | Msa0506270:CDS | 45.0% | |
| ACTTGTGACCATGGCTGAAA+TGG | + | chr3_4:52540974-52540993 | Msa0506270:CDS | 45.0% | |
| TTCCAAGTCCATTTCAGCCA+TGG | - | chr3_4:52540985-52541004 | None:intergenic | 45.0% | |
| ! | GGCTGAAATGGACTTGGAAA+AGG | + | chr3_4:52540986-52541005 | Msa0506270:CDS | 45.0% |
| ! | CGTGTCTTCTTTTAATGGCG+CGG | + | chr3_4:52541113-52541132 | Msa0506270:intron | 45.0% |
| ! | TCTTCTTTTAATGGCGCGGT+TGG | + | chr3_4:52541117-52541136 | Msa0506270:intron | 45.0% |
| !! | TCAGTGTTGGTCTTTGGGAT+GGG | - | chr3_4:52541205-52541224 | None:intergenic | 45.0% |
| !! | ATGCGTCAGTGTTGGTCTTT+GGG | - | chr3_4:52541210-52541229 | None:intergenic | 45.0% |
| !! | AATGCGTCAGTGTTGGTCTT+TGG | - | chr3_4:52541211-52541230 | None:intergenic | 45.0% |
| GAAGAGTAATGCGTCAGTGT+TGG | - | chr3_4:52541218-52541237 | None:intergenic | 45.0% | |
| !! | CGAAAAGATGGGTTATGAGG+AGG | + | chr3_4:52541240-52541259 | Msa0506270:CDS | 45.0% |
| !! | AAAGATGGGTTATGAGGAGG+AGG | + | chr3_4:52541243-52541262 | Msa0506270:CDS | 45.0% |
| TCATGACGAAGAAGCTCAAG+GGG | + | chr3_4:52541311-52541330 | Msa0506270:CDS | 45.0% | |
| GAGACCGAAGGTAATGCAAA+AGG | + | chr3_4:52541352-52541371 | Msa0506270:intron | 45.0% | |
| !!! | GACCGATTTGCCCACTTTTT+TGG | + | chr3_4:52541388-52541407 | Msa0506270:intron | 45.0% |
| CCGTTCATTACAGACTTCAC+AGG | - | chr3_4:52542415-52542434 | None:intergenic | 45.0% | |
| GGTAGTCGAAATTAGTTCCG+AGG | + | chr3_4:52543226-52543245 | Msa0506270:CDS | 45.0% | |
| CACGTCCTCAGATTCATCAA+AGG | - | chr3_4:52543255-52543274 | None:intergenic | 45.0% | |
| CTTTGATGAATCTGAGGACG+TGG | + | chr3_4:52543253-52543272 | Msa0506270:intron | 45.0% | |
| TCAACATGTGCATAGCCTAG+TGG | - | chr3_4:52543596-52543615 | None:intergenic | 45.0% | |
| AACAACTCAGCTGAAAGTGG+CGG | + | chr3_4:52543944-52543963 | Msa0506270:intron | 45.0% | |
| CATTGTGCATGAGCTGAAAG+GGG | - | chr3_4:52544029-52544048 | None:intergenic | 45.0% | |
| ! | CAAGCCAGTTGATACTCCTA+TGG | - | chr3_4:52544675-52544694 | None:intergenic | 45.0% |
| GAAGAAACAGCTTCTGCTTC+AGG | - | chr3_4:52544802-52544821 | None:intergenic | 45.0% | |
| GAGTGCACCTGAAAAGAAAG+CGG | + | chr3_4:52544831-52544850 | Msa0506270:intron | 45.0% | |
| GTTTCTTAAGACCACATCCG+GGG | - | chr3_4:52545077-52545096 | None:intergenic | 45.0% | |
| CGTTTCTTAAGACCACATCC+GGG | - | chr3_4:52545078-52545097 | None:intergenic | 45.0% | |
| GCGTTTCTTAAGACCACATC+CGG | - | chr3_4:52545079-52545098 | None:intergenic | 45.0% | |
| GGATTATCTCTTACCTGACG+TGG | + | chr3_4:52545129-52545148 | Msa0506270:CDS | 45.0% | |
| CATCAAAGATGACGTAACCG+AGG | - | chr3_4:52545219-52545238 | None:intergenic | 45.0% | |
| GTCGTTGAACCGAAGAGTAA+TGG | + | chr3_4:52545238-52545257 | Msa0506270:CDS | 45.0% | |
| GAACCGAAGAGTAATGGTTG+TGG | + | chr3_4:52545244-52545263 | Msa0506270:CDS | 45.0% | |
| AACCCTATCTTTCGGAGAGA+AGG | + | chr3_4:52545289-52545308 | Msa0506270:CDS | 45.0% | |
| CTCCTTCTCTCCGAAAGATA+GGG | - | chr3_4:52545294-52545313 | None:intergenic | 45.0% | |
| ACTCCTTCTCTCCGAAAGAT+AGG | - | chr3_4:52545295-52545314 | None:intergenic | 45.0% | |
| AGGAGTCGCTTCTAAACTTG+TGG | + | chr3_4:52545309-52545328 | Msa0506270:CDS | 45.0% | |
| !! | ACTTGTGGAAAGCGCTGAAA+AGG | + | chr3_4:52545324-52545343 | Msa0506270:CDS | 45.0% |
| !! | AAAGCGCTGAAAAGGACTTG+AGG | + | chr3_4:52545332-52545351 | Msa0506270:CDS | 45.0% |
| !! | AAGCGCTGAAAAGGACTTGA+GGG | + | chr3_4:52545333-52545352 | Msa0506270:CDS | 45.0% |
| !! | ATCCATCAGAGTTGGTCTTC+GGG | - | chr3_4:52545605-52545624 | None:intergenic | 45.0% |
| CGAAAAGATGGGGTATGAGA+AGG | + | chr3_4:52545635-52545654 | Msa0506270:CDS | 45.0% | |
| AAAGATGGGGTATGAGAAGG+AGG | + | chr3_4:52545638-52545657 | Msa0506270:CDS | 45.0% | |
| ATGCATTATGCGGAGACTGA+AGG | + | chr3_4:52545735-52545754 | Msa0506270:intron | 45.0% | |
| !! | CATTTTAGCACGAGGAAGCA+AGG | + | chr3_4:52545960-52545979 | Msa0506270:intron | 45.0% |
| GGCACATTGTTGAAACTGGT+TGG | - | chr3_4:52545987-52546006 | None:intergenic | 45.0% | |
| AAAGTTGCCCAATCTGATGG+TGG | - | chr3_4:52546099-52546118 | None:intergenic | 45.0% | |
| GACAGTAGTAGAGTCAGATG+AGG | + | chr3_4:52546303-52546322 | Msa0506270:intron | 45.0% | |
| AGTCAGATGAGGGTAACCTA+TGG | + | chr3_4:52546314-52546333 | Msa0506270:intron | 45.0% | |
| GTCAGATGAGGGTAACCTAT+GGG | + | chr3_4:52546315-52546334 | Msa0506270:intron | 45.0% | |
| TAGAAAACGGGCACTATGAC+AGG | + | chr3_4:52546549-52546568 | Msa0506270:intron | 45.0% | |
| !!! | GTTTTGTTTTGCTGCTGCAG+AGG | - | chr3_4:52546593-52546612 | None:intergenic | 45.0% |
| TTGTTTGCTTAGAGAGGCTG+AGG | - | chr3_4:52546678-52546697 | None:intergenic | 45.0% | |
| ! | TGGCATTGGAATCCAAAGGA+AGG | - | chr3_4:52546729-52546748 | None:intergenic | 45.0% |
| CGGCTTGTCTGTTCTATGAA+TGG | - | chr3_4:52546749-52546768 | None:intergenic | 45.0% | |
| TCCTAGCTCGATTCAAAAGC+CGG | + | chr3_4:52546868-52546887 | Msa0506270:intron | 45.0% | |
| TGAGGTTGCTGCCAAACAAA+AGG | + | chr3_4:52546999-52547018 | Msa0506270:intron | 45.0% | |
| ! | TACAGGTGCACTCCCATTTT+TGG | - | chr3_4:52547206-52547225 | None:intergenic | 45.0% |
| !! | GGTGCACTTCCTATTTTGGA+AGG | - | chr3_4:52547433-52547452 | None:intergenic | 45.0% |
| GAACTATCAGCCTTCTTTGC+GGG | - | chr3_4:52547454-52547473 | None:intergenic | 45.0% | |
| CGAATCTTCTGGTGAAGATG+AGG | + | chr3_4:52547489-52547508 | Msa0506270:intron | 45.0% | |
| GGGTTGAAGACCATATCAAC+AGG | + | chr3_4:52547625-52547644 | Msa0506270:intron | 45.0% | |
| ! | GTCAGATTTTTGCACACCGA+AGG | - | chr3_4:52547833-52547852 | None:intergenic | 45.0% |
| CGTCTTGCTTCTCATAAGGA+TGG | + | chr3_4:52547971-52547990 | Msa0506270:CDS | 45.0% | |
| TGTTGAGTTTGCAACTGCAG+AGG | + | chr3_4:52548015-52548034 | Msa0506270:intron | 45.0% | |
| ! | CTGTCCGACTTGATTTAGCT+CGG | + | chr3_4:52548192-52548211 | Msa0506270:intron | 45.0% |
| ! | TGTCCGACTTGATTTAGCTC+GGG | + | chr3_4:52548193-52548212 | Msa0506270:intron | 45.0% |
| TCTCCCGAGCTAAATCAAGT+CGG | - | chr3_4:52548199-52548218 | None:intergenic | 45.0% | |
| ! | ACTTGATTTAGCTCGGGAGA+GGG | + | chr3_4:52548199-52548218 | Msa0506270:intron | 45.0% |
| CGTGCAGGATTCTATAAACC+AGG | + | chr3_4:52548405-52548424 | Msa0506270:intron | 45.0% | |
| !! | ACTACTTTTGCCGACGACTA+GGG | + | chr3_4:52548665-52548684 | Msa0506270:CDS | 45.0% |
| AAAACTGCTACCCTAGTCGT+CGG | - | chr3_4:52548678-52548697 | None:intergenic | 45.0% | |
| !! | AGAAAAATATTTAATTAAAA+CGG | - | chr3_4:52544764-52544783 | None:intergenic | 5.0% |
| GTTGCAGCAGATGATCTCCT+AGG | + | chr3_4:52540837-52540856 | Msa0506270:intron | 50.0% | |
| GGTAACCGAGGATAATGCCT+AGG | - | chr3_4:52540857-52540876 | None:intergenic | 50.0% | |
| ! | GTTGGTGAACTGAAGCGTAC+TGG | + | chr3_4:52540888-52540907 | Msa0506270:CDS | 50.0% |
| GAAAGATAGGGCCAACGAAG+AGG | - | chr3_4:52540932-52540951 | None:intergenic | 50.0% | |
| ! | GACCATGGCTGAAATGGACT+TGG | + | chr3_4:52540980-52540999 | Msa0506270:CDS | 50.0% |
| !! | GTCAGTGTTGGTCTTTGGGA+TGG | - | chr3_4:52541206-52541225 | None:intergenic | 50.0% |
| GGTCTGTCCTGATGAAGATG+AGG | + | chr3_4:52541658-52541677 | Msa0506270:intron | 50.0% | |
| GAAGTAACAGCTTCTGCTGC+AGG | - | chr3_4:52541801-52541820 | None:intergenic | 50.0% | |
| TATAGGCAAGAGGCAAGCTG+AGG | + | chr3_4:52543133-52543152 | Msa0506270:intron | 50.0% | |
| GCAAGCTGAGGAAGAAGTCA+AGG | + | chr3_4:52543145-52543164 | Msa0506270:CDS | 50.0% | |
| CGAGGTTGCTGCCAAACAAA+AGG | + | chr3_4:52543196-52543215 | Msa0506270:CDS | 50.0% | |
| ATGTCGAGAGCTTACGCGTT+TGG | - | chr3_4:52543639-52543658 | None:intergenic | 50.0% | |
| ATGTCCGACTTCAAGAAGCC+CGG | + | chr3_4:52543777-52543796 | Msa0506270:intron | 50.0% | |
| GCAAGCTCCCCCTAAATCTA+AGG | + | chr3_4:52544229-52544248 | Msa0506270:intron | 50.0% | |
| AGCTCCCCCTAAATCTAAGG+CGG | + | chr3_4:52544232-52544251 | Msa0506270:intron | 50.0% | |
| ! | ATCTATGAAGTCTGGAGCGG+AGG | + | chr3_4:52545018-52545037 | Msa0506270:intron | 50.0% |
| AAGATATGTGTCCCCGGATG+TGG | + | chr3_4:52545063-52545082 | Msa0506270:intron | 50.0% | |
| !! | ATCAGAGTTGGTCTTCGGGA+CGG | - | chr3_4:52545601-52545620 | None:intergenic | 50.0% |
| GGGGAAGCAGATGCATTATG+CGG | + | chr3_4:52545725-52545744 | Msa0506270:intron | 50.0% | |
| GCATATGGCAATCGTGGACT+TGG | - | chr3_4:52546445-52546464 | None:intergenic | 50.0% | |
| GCGACAAACACTCCTTCCTT+TGG | + | chr3_4:52546714-52546733 | Msa0506270:intron | 50.0% | |
| AGAAGTGGAAGAGCTAGTGG+AGG | - | chr3_4:52546820-52546839 | None:intergenic | 50.0% | |
| TGGAGAAGTGGAAGAGCTAG+TGG | - | chr3_4:52546823-52546842 | None:intergenic | 50.0% | |
| ! | TCCGGCTTTTGAATCGAGCT+AGG | - | chr3_4:52546872-52546891 | None:intergenic | 50.0% |
| TATAGGCAAGAGGCAAGCTG+TGG | + | chr3_4:52543133-52543152 | Msa0506270:intron | 50.0% | |
| !! | GGTGCACTCCCATTTTTGGA+TGG | - | chr3_4:52547202-52547221 | None:intergenic | 50.0% |
| GAAGGAACAACTTCTGCTGC+AGG | - | chr3_4:52547415-52547434 | None:intergenic | 50.0% | |
| ! | TGCGGGTGCACTTCCTATTT+TGG | - | chr3_4:52547437-52547456 | None:intergenic | 50.0% |
| GGGTACCCACGAATGAATGT+AGG | - | chr3_4:52547600-52547619 | None:intergenic | 50.0% | |
| TCATTCGTGGGTACCCCTAA+TGG | + | chr3_4:52547604-52547623 | Msa0506270:intron | 50.0% | |
| CATTCGTGGGTACCCCTAAT+GGG | + | chr3_4:52547605-52547624 | Msa0506270:intron | 50.0% | |
| ! | GACTTGATTTAGCTCGGGAG+AGG | + | chr3_4:52548198-52548217 | Msa0506270:intron | 50.0% |
| ! | CTTGATTTAGCTCGGGAGAG+GGG | + | chr3_4:52548200-52548219 | Msa0506270:intron | 50.0% |
| !! | GACTACTTTTGCCGACGACT+AGG | + | chr3_4:52548664-52548683 | Msa0506270:CDS | 50.0% |
| ! | CGCTACTCGACTTGTGACCA+TGG | + | chr3_4:52540965-52540984 | Msa0506270:CDS | 55.0% |
| !! | GCAAGGTGCTGCTTACGTCT+CGG | + | chr3_4:52541177-52541196 | Msa0506270:intron | 55.0% |
| !! | GATGGGTTATGAGGAGGAGG+CGG | + | chr3_4:52541246-52541265 | Msa0506270:CDS | 55.0% |
| TCACTTCACGAGGCTCGTTC+AGG | - | chr3_4:52541622-52541641 | None:intergenic | 55.0% | |
| TGTCCGACTTCAAGAAGCCC+GGG | + | chr3_4:52543778-52543797 | Msa0506270:intron | 55.0% | |
| ACTCCCGGGCTTCTTGAAGT+CGG | - | chr3_4:52543784-52543803 | None:intergenic | 55.0% | |
| GAGTGGCGTCCATATCCTCA+AGG | + | chr3_4:52543800-52543819 | Msa0506270:intron | 55.0% | |
| AACTCAGCTGAAAGTGGCGG+AGG | + | chr3_4:52543947-52543966 | Msa0506270:intron | 55.0% | |
| !! | GGAGGCTTTGTCAGGGGTTT+TGG | + | chr3_4:52543968-52543987 | Msa0506270:intron | 55.0% |
| GGGGAGCCTCTATCAGATTC+AGG | - | chr3_4:52544621-52544640 | None:intergenic | 55.0% | |
| GATAGAGGCTCCCCCTGATT+AGG | + | chr3_4:52544627-52544646 | Msa0506270:intron | 55.0% | |
| GATCGCCAAGACGCTATCCT+CGG | + | chr3_4:52545199-52545218 | Msa0506270:CDS | 55.0% | |
| CGTAACCGAGGATAGCGTCT+TGG | - | chr3_4:52545207-52545226 | None:intergenic | 55.0% | |
| !! | TCAGAGTTGGTCTTCGGGAC+GGG | - | chr3_4:52545600-52545619 | None:intergenic | 55.0% |
| GTCCCGAAGACCAACTCTGA+TGG | + | chr3_4:52545600-52545619 | Msa0506270:CDS | 55.0% | |
| TTTGCTGCTGCAGAGGGCTT+AGG | - | chr3_4:52546586-52546605 | None:intergenic | 55.0% | |
| GCAAGCTGTGGAAGAAGTCG+AGG | + | chr3_4:52546948-52546967 | Msa0506270:intron | 55.0% | |
| ! | AGGAAGTGCACCCGCAAAGA+AGG | + | chr3_4:52547441-52547460 | Msa0506270:intron | 55.0% |
| TGGACTGTTTACAGGCGTGC+AGG | + | chr3_4:52548390-52548409 | Msa0506270:intron | 55.0% | |
| GTCTCTTACGACCACACCCG+GGG | - | chr3_4:52540727-52540746 | None:intergenic | 60.0% | |
| CGTCTCTTACGACCACACCC+GGG | - | chr3_4:52540728-52540747 | None:intergenic | 60.0% | |
| GCGTCTCTTACGACCACACC+CGG | - | chr3_4:52540729-52540748 | None:intergenic | 60.0% | |
| GGGGAAGCAGATGCGTTCTG+CGG | + | chr3_4:52541330-52541349 | Msa0506270:CDS | 60.0% | |
| ATGCGTTCTGCGGAGACCGA+AGG | + | chr3_4:52541340-52541359 | Msa0506270:CDS | 60.0% | |
| GACTTCAAGAAGCCCGGGAG+TGG | + | chr3_4:52543783-52543802 | Msa0506270:intron | 60.0% | |
| AGGATATGGACGCCACTCCC+GGG | - | chr3_4:52543798-52543817 | None:intergenic | 60.0% | |
| GAGGATATGGACGCCACTCC+CGG | - | chr3_4:52543799-52543818 | None:intergenic | 60.0% | |
| ! | TCAGCTGAAAGTGGCGGAGG+AGG | + | chr3_4:52543950-52543969 | Msa0506270:intron | 60.0% |
| ! | TGGCGGAGGAGGCTTTGTCA+GGG | + | chr3_4:52543961-52543980 | Msa0506270:intron | 60.0% |
| GAGGCTGAGGCTGAGGTATG+CGG | - | chr3_4:52546665-52546684 | None:intergenic | 60.0% | |
| GCTTAGAGAGGCTGAGGCTG+AGG | - | chr3_4:52546672-52546691 | None:intergenic | 60.0% | |
| ! | GTGGCGGAGGAGGCTTTGTC+AGG | + | chr3_4:52543960-52543979 | Msa0506270:intron | 65.0% |
| ! | GGCGGAGGAGGCTTTGTCAG+GGG | + | chr3_4:52543962-52543981 | Msa0506270:intron | 65.0% |
| TGCTGCAGAGGGCTTAGGCG+GGG | - | chr3_4:52546581-52546600 | None:intergenic | 65.0% | |
| CTGCTGCAGAGGGCTTAGGC+GGG | - | chr3_4:52546582-52546601 | None:intergenic | 65.0% | |
| GCTGCTGCAGAGGGCTTAGG+CGG | - | chr3_4:52546583-52546602 | None:intergenic | 65.0% | |
| GCTGCAGAGGGCTTAGGCGG+GGG | - | chr3_4:52546580-52546599 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 52540717 | 52548728 | 52540717 | ID=Msa0506270;Name=Msa0506270 |
| chr3_4 | mRNA | 52540717 | 52548728 | 52540717 | ID=Msa0506270-mRNA-1;Parent=Msa0506270;Name=Msa0506270-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|0.9|0.44|0.4|10|0|438 |
| chr3_4 | exon | 52540717 | 52540822 | 52540717 | ID=Msa0506270-mRNA-1:exon:11452;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52540844 | 52541007 | 52540844 | ID=Msa0506270-mRNA-1:exon:11453;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52541178 | 52541361 | 52541178 | ID=Msa0506270-mRNA-1:exon:11454;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52543138 | 52543271 | 52543138 | ID=Msa0506270-mRNA-1:exon:11455;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52545121 | 52545360 | 52545121 | ID=Msa0506270-mRNA-1:exon:11456;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52545573 | 52545701 | 52545573 | ID=Msa0506270-mRNA-1:exon:11457;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52547178 | 52547291 | 52547178 | ID=Msa0506270-mRNA-1:exon:11458;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52547766 | 52547854 | 52547766 | ID=Msa0506270-mRNA-1:exon:11459;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52547931 | 52548015 | 52547931 | ID=Msa0506270-mRNA-1:exon:11460;Parent=Msa0506270-mRNA-1 |
| chr3_4 | exon | 52548657 | 52548728 | 52548657 | ID=Msa0506270-mRNA-1:exon:11461;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52540717 | 52540822 | 52540717 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52540844 | 52541007 | 52540844 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52541178 | 52541361 | 52541178 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52543138 | 52543271 | 52543138 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52545121 | 52545360 | 52545121 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52545573 | 52545701 | 52545573 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52547178 | 52547291 | 52547178 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52547766 | 52547854 | 52547766 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52547931 | 52548015 | 52547931 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| chr3_4 | CDS | 52548657 | 52548728 | 52548657 | ID=Msa0506270-mRNA-1:cds;Parent=Msa0506270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
