Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481850 | XP_019433617.1 | 100.000 | 128 | 0 | 0 | 1 | 128 | 6 | 133 | 7.74e-89 | 264 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481850 | sp|P49636|RL40_NICSY | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 1.93e-90 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481850 | A0A022R0F0 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 5.29e-89 | 263 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0481850 | 0.878671 | 2.324497e-69 | -8.615850e-47 |
| Msa0002790 | Msa0481850 | 0.876912 | 9.571947e-69 | -8.615850e-47 |
| Msa0027590 | Msa0481850 | 0.826995 | 1.997666e-54 | -8.615850e-47 |
| Msa0032780 | Msa0481850 | 0.838238 | 3.238420e-57 | -8.615850e-47 |
| Msa0045730 | Msa0481850 | 0.835342 | 1.774002e-56 | -8.615850e-47 |
| Msa0075350 | Msa0481850 | 0.839791 | 1.282817e-57 | -8.615850e-47 |
| Msa0085780 | Msa0481850 | 0.802486 | 5.484628e-49 | -8.615850e-47 |
| Msa0087910 | Msa0481850 | 0.811190 | 7.925517e-51 | -8.615850e-47 |
| Msa0097580 | Msa0481850 | 0.810741 | 9.911380e-51 | -8.615850e-47 |
| Msa0116130 | Msa0481850 | 0.829111 | 6.181058e-55 | -8.615850e-47 |
| Msa0116670 | Msa0481850 | 0.840534 | 8.207340e-58 | -8.615850e-47 |
| Msa0128330 | Msa0481850 | 0.800460 | 1.426104e-48 | -8.615850e-47 |
| Msa0128750 | Msa0481850 | 0.843914 | 1.044987e-58 | -8.615850e-47 |
| Msa0133540 | Msa0481850 | 0.861331 | 1.105771e-63 | -8.615850e-47 |
| Msa0146340 | Msa0481850 | 0.841771 | 3.882885e-58 | -8.615850e-47 |
| Msa0173530 | Msa0481850 | 0.837766 | 4.283550e-57 | -8.615850e-47 |
| Msa0174580 | Msa0481850 | 0.802230 | 6.191620e-49 | -8.615850e-47 |
| Msa0181490 | Msa0481850 | 0.866224 | 3.332951e-65 | -8.615850e-47 |
| Msa0186740 | Msa0481850 | 0.807127 | 5.883612e-50 | -8.615850e-47 |
| Msa0187930 | Msa0481850 | 0.809729 | 1.638126e-50 | -8.615850e-47 |
| Msa0191450 | Msa0481850 | 0.841709 | 4.031252e-58 | -8.615850e-47 |
| Msa0191550 | Msa0481850 | 0.832832 | 7.546505e-56 | -8.615850e-47 |
| Msa0192750 | Msa0481850 | 0.872854 | 2.308953e-67 | -8.615850e-47 |
| Msa0194940 | Msa0481850 | 0.852816 | 3.601003e-61 | -8.615850e-47 |
| Msa0197980 | Msa0481850 | 0.819608 | 1.062047e-52 | -8.615850e-47 |
| Msa0210330 | Msa0481850 | 0.836426 | 9.424917e-57 | -8.615850e-47 |
| Msa0210360 | Msa0481850 | 0.873338 | 1.589155e-67 | -8.615850e-47 |
| Msa0219120 | Msa0481850 | 0.877165 | 7.818872e-69 | -8.615850e-47 |
| Msa0222730 | Msa0481850 | 0.858259 | 9.311343e-63 | -8.615850e-47 |
| Msa0224560 | Msa0481850 | 0.823757 | 1.166580e-53 | -8.615850e-47 |
| Msa0229150 | Msa0481850 | 0.845689 | 3.472631e-59 | -8.615850e-47 |
| Msa0230490 | Msa0481850 | 0.821107 | 4.814104e-53 | -8.615850e-47 |
| Msa0235050 | Msa0481850 | 0.839739 | 1.323142e-57 | -8.615850e-47 |
| Msa0369410 | Msa0481850 | 0.835555 | 1.567285e-56 | -8.615850e-47 |
| Msa0463520 | Msa0481850 | 0.828123 | 1.070724e-54 | -8.615850e-47 |
| Msa0471880 | Msa0481850 | 0.855400 | 6.469455e-62 | -8.615850e-47 |
| Msa0481520 | Msa0481850 | 0.849142 | 3.908673e-60 | -8.615850e-47 |
| Msa0481850 | Msa0483110 | 0.890441 | 9.824497e-74 | -8.615850e-47 |
| Msa0481850 | Msa0526540 | 0.807409 | 5.126995e-50 | -8.615850e-47 |
| Msa0481850 | Msa0529900 | 0.821199 | 4.584875e-53 | -8.615850e-47 |
| Msa0481850 | Msa0550420 | 0.823316 | 1.479219e-53 | -8.615850e-47 |
| Msa0481850 | Msa0573350 | 0.847987 | 8.163950e-60 | -8.615850e-47 |
| Msa0481850 | Msa0576940 | 0.812549 | 4.009732e-51 | -8.615850e-47 |
| Msa0481850 | Msa0579830 | 0.810115 | 1.352911e-50 | -8.615850e-47 |
| Msa0481850 | Msa0584030 | 0.839408 | 1.613311e-57 | -8.615850e-47 |
| Msa0481850 | Msa0590940 | 0.813963 | 1.961392e-51 | -8.615850e-47 |
| Msa0481850 | Msa0596370 | 0.802823 | 4.672089e-49 | -8.615850e-47 |
| Msa0481850 | Msa0604960 | 0.851311 | 9.639508e-61 | -8.615850e-47 |
| Msa0481850 | Msa0605890 | 0.801426 | 9.053095e-49 | -8.615850e-47 |
| Msa0481850 | Msa0617540 | 0.800656 | 1.301236e-48 | -8.615850e-47 |
| Msa0481850 | Msa0622750 | 0.865266 | 6.689978e-65 | -8.615850e-47 |
| Msa0481850 | Msa0623200 | 0.829602 | 4.696706e-55 | -8.615850e-47 |
| Msa0481850 | Msa0683660 | 0.863597 | 2.222397e-64 | -8.615850e-47 |
| Msa0481850 | Msa0685460 | 0.843880 | 1.067139e-58 | -8.615850e-47 |
| Msa0481850 | Msa0685470 | 0.808430 | 3.108807e-50 | -8.615850e-47 |
| Msa0481850 | Msa0705800 | 0.885968 | 5.145554e-72 | -8.615850e-47 |
| Msa0481850 | Msa0712610 | 0.940152 | 3.801131e-100 | -8.615850e-47 |
| Msa0481850 | Msa0729200 | 0.845322 | 4.364817e-59 | -8.615850e-47 |
| Msa0481850 | Msa0745970 | 0.800264 | 1.563717e-48 | -8.615850e-47 |
| Msa0481850 | Msa0752910 | 0.926892 | 2.506723e-91 | -8.615850e-47 |
| Msa0481850 | Msa0769590 | 0.837650 | 4.587173e-57 | -8.615850e-47 |
| Msa0481850 | Msa0781080 | 0.884269 | 2.215992e-71 | -8.615850e-47 |
| Msa0481850 | Msa0785130 | 0.815522 | 8.853701e-52 | -8.615850e-47 |
| Msa0481850 | Msa0788380 | 0.800433 | 1.444760e-48 | -8.615850e-47 |
| Msa0481850 | Msa0792420 | 0.869933 | 2.134697e-66 | -8.615850e-47 |
| Msa0481850 | Msa0806880 | 0.824623 | 7.300852e-54 | -8.615850e-47 |
| Msa0481850 | Msa0817540 | 0.806338 | 8.633539e-50 | -8.615850e-47 |
| Msa0481850 | Msa0822580 | 0.834457 | 2.964513e-56 | -8.615850e-47 |
| Msa0481850 | Msa0827380 | 0.859208 | 4.849190e-63 | -8.615850e-47 |
| Msa0481850 | Msa0861320 | 0.837176 | 6.065315e-57 | -8.615850e-47 |
| Msa0481850 | Msa0876170 | 0.842426 | 2.605541e-58 | -8.615850e-47 |
| Msa0481850 | Msa0888810 | 0.809128 | 2.205074e-50 | -8.615850e-47 |
| Msa0481850 | Msa0915540 | 0.819252 | 1.280758e-52 | -8.615850e-47 |
| Msa0481850 | Msa0945480 | 0.872217 | 3.768777e-67 | -8.615850e-47 |
| Msa0481850 | Msa1010310 | 0.877974 | 4.085284e-69 | -8.615850e-47 |
| Msa0481850 | Msa1021120 | 0.802964 | 4.368873e-49 | -8.615850e-47 |
| Msa0481850 | Msa1037290 | 0.896576 | 3.231317e-76 | -8.615850e-47 |
| Msa0481850 | Msa1039520 | 0.805643 | 1.208961e-49 | -8.615850e-47 |
| Msa0481850 | Msa1040160 | 0.836036 | 1.183703e-56 | -8.615850e-47 |
| Msa0481850 | Msa1078870 | 0.872226 | 3.743386e-67 | -8.615850e-47 |
| Msa0481850 | Msa1078980 | 0.849853 | 2.477192e-60 | -8.615850e-47 |
| Msa0481850 | Msa1080350 | 0.989535 | 1.533302e-178 | -8.615850e-47 |
| Msa0481850 | Msa1082170 | 0.827936 | 1.188104e-54 | -8.615850e-47 |
| Msa0481850 | Msa1083370 | 0.825661 | 4.150677e-54 | -8.615850e-47 |
| Msa0481850 | Msa1088490 | 0.852280 | 5.121687e-61 | -8.615850e-47 |
| Msa0481850 | Msa1094380 | 0.834014 | 3.829277e-56 | -8.615850e-47 |
| Msa0481850 | Msa1096900 | 0.842917 | 1.929457e-58 | -8.615850e-47 |
| Msa0481850 | Msa1124850 | 0.820213 | 7.726056e-53 | -8.615850e-47 |
| Msa0481850 | Msa1125860 | 0.988859 | 1.062248e-175 | -8.615850e-47 |
| Msa0481850 | Msa1126060 | 0.989662 | 4.273560e-179 | -8.615850e-47 |
| Msa0481850 | Msa1126470 | 0.804362 | 2.240802e-49 | -8.615850e-47 |
| Msa0481850 | Msa1126520 | 0.918149 | 2.223836e-86 | -8.615850e-47 |
| Msa0481850 | Msa1163530 | 0.801340 | 9.431825e-49 | -8.615850e-47 |
| Msa0481850 | Msa1164150 | 0.883200 | 5.484376e-71 | -8.615850e-47 |
| Msa0481850 | Msa1166570 | 0.800576 | 1.350629e-48 | -8.615850e-47 |
| Msa0481850 | Msa1166860 | 0.809002 | 2.346327e-50 | -8.615850e-47 |
| Msa0481850 | Msa1167540 | 0.837918 | 3.914281e-57 | -8.615850e-47 |
| Msa0481850 | Msa1167550 | 0.826335 | 2.870850e-54 | -8.615850e-47 |
| Msa0481850 | Msa1169180 | 0.848172 | 7.257761e-60 | -8.615850e-47 |
| Msa0481850 | Msa1186030 | 0.851024 | 1.161737e-60 | -8.615850e-47 |
| Msa0481850 | Msa1215820 | 0.879301 | 1.393579e-69 | -8.615850e-47 |
| Msa0481850 | Msa1240270 | 0.841541 | 4.462807e-58 | -8.615850e-47 |
| Msa0481850 | Msa1256840 | 0.880514 | 5.155743e-70 | -8.615850e-47 |
| Msa0481850 | Msa1273340 | 0.844686 | 6.481755e-59 | -8.615850e-47 |
| Msa0481850 | Msa1295150 | 0.899711 | 1.512327e-77 | -8.615850e-47 |
| Msa0481850 | Msa1295170 | 0.871807 | 5.155483e-67 | -8.615850e-47 |
| Msa0481850 | Msa1311400 | 0.885660 | 6.712359e-72 | -8.615850e-47 |
| Msa0481850 | Msa1316680 | 0.803525 | 3.344622e-49 | -8.615850e-47 |
| Msa0481850 | Msa1321790 | 0.845033 | 5.227259e-59 | -8.615850e-47 |
| Msa0481850 | Msa1332250 | 0.838142 | 3.427542e-57 | -8.615850e-47 |
| Msa0481850 | Msa1338190 | 0.850373 | 1.771203e-60 | -8.615850e-47 |
| Msa0481850 | Msa1349570 | 0.832181 | 1.094344e-55 | -8.615850e-47 |
| Msa0481850 | Msa1356790 | 0.938599 | 5.155246e-99 | -8.615850e-47 |
| Msa0481850 | Msa1362210 | 0.826167 | 3.146861e-54 | -8.615850e-47 |
| Msa0481850 | Msa1362790 | 0.905167 | 5.714808e-80 | -8.615850e-47 |
| Msa0481850 | Msa1363330 | 0.805925 | 1.054743e-49 | -8.615850e-47 |
| Msa0481850 | Msa1366180 | 0.834823 | 2.397758e-56 | -8.615850e-47 |
| Msa0481850 | Msa1368920 | 0.894685 | 1.953453e-75 | -8.615850e-47 |
| Msa0481850 | Msa1369190 | 0.844156 | 9.000488e-59 | -8.615850e-47 |
| Msa0481850 | Msa1374240 | 0.848832 | 4.765431e-60 | -8.615850e-47 |
| Msa0481850 | Msa1386600 | 0.805031 | 1.624291e-49 | -8.615850e-47 |
| Msa0481850 | Msa1392590 | 0.863955 | 1.720311e-64 | -8.615850e-47 |
| Msa0481850 | Msa1397100 | 0.858266 | 9.271237e-63 | -8.615850e-47 |
| Msa0481850 | Msa1403910 | 0.854543 | 1.147877e-61 | -8.615850e-47 |
| Msa0481850 | Msa1406080 | 0.867203 | 1.627210e-65 | -8.615850e-47 |
| Msa0481850 | Msa1407070 | 0.847146 | 1.390734e-59 | -8.615850e-47 |
| Msa0481850 | Msa1413500 | 0.825375 | 4.851151e-54 | -8.615850e-47 |
| Msa0481850 | Msa1418770 | 0.816966 | 4.211388e-52 | -8.615850e-47 |
| Msa0481850 | Msa1426120 | 0.870699 | 1.197750e-66 | -8.615850e-47 |
| Msa0481850 | Msa1426490 | 0.873241 | 1.712987e-67 | -8.615850e-47 |
| Msa0481850 | Msa1427560 | 0.824292 | 8.735999e-54 | -8.615850e-47 |
| Msa0481850 | Msa1448690 | 0.808774 | 2.625422e-50 | -8.615850e-47 |
| Msa0481850 | Msa1450280 | 0.819619 | 1.056197e-52 | -8.615850e-47 |
| Msa0481850 | Msa1455950 | 0.842454 | 2.560430e-58 | -8.615850e-47 |
| Msa0481850 | Msa1456050 | 0.845762 | 3.317680e-59 | -8.615850e-47 |
| Msa0481850 | Msa1462860 | 0.808080 | 3.691625e-50 | -8.615850e-47 |
| Msa0481850 | Msa1463570 | 0.806039 | 9.984057e-50 | -8.615850e-47 |
| Msa0244780 | Msa0481850 | 0.815946 | 7.124605e-52 | -8.615850e-47 |
| Msa0250820 | Msa0481850 | 0.812119 | 4.977085e-51 | -8.615850e-47 |
| Msa0257450 | Msa0481850 | 0.820367 | 7.119492e-53 | -8.615850e-47 |
| Msa0258850 | Msa0481850 | 0.876663 | 1.167766e-68 | -8.615850e-47 |
| Msa0264010 | Msa0481850 | 0.840388 | 8.962225e-58 | -8.615850e-47 |
| Msa0268130 | Msa0481850 | 0.801692 | 7.986564e-49 | -8.615850e-47 |
| Msa0289580 | Msa0481850 | 0.815121 | 1.087547e-51 | -8.615850e-47 |
| Msa0289610 | Msa0481850 | 0.821799 | 3.331042e-53 | -8.615850e-47 |
| Msa0297830 | Msa0481850 | 0.846088 | 2.705102e-59 | -8.615850e-47 |
| Msa0298200 | Msa0481850 | 0.871979 | 4.522585e-67 | -8.615850e-47 |
| Msa0298990 | Msa0481850 | 0.809152 | 2.179361e-50 | -8.615850e-47 |
| Msa0301220 | Msa0481850 | 0.824242 | 8.977431e-54 | -8.615850e-47 |
| Msa0303630 | Msa0481850 | 0.802649 | 5.074408e-49 | -8.615850e-47 |
| Msa0306690 | Msa0481850 | 0.850529 | 1.601097e-60 | -8.615850e-47 |
| Msa0312210 | Msa0481850 | 0.842002 | 3.372396e-58 | -8.615850e-47 |
| Msa0327300 | Msa0481850 | 0.816069 | 6.687284e-52 | -8.615850e-47 |
| Msa0327330 | Msa0481850 | 0.836496 | 9.044684e-57 | -8.615850e-47 |
| Msa0333910 | Msa0481850 | 0.809778 | 1.599303e-50 | -8.615850e-47 |
| Msa0334030 | Msa0481850 | 0.820420 | 6.923348e-53 | -8.615850e-47 |
| Msa0335840 | Msa0481850 | 0.854864 | 9.264776e-62 | -8.615850e-47 |
| Msa0336010 | Msa0481850 | 0.835704 | 1.437254e-56 | -8.615850e-47 |
| Msa0337670 | Msa0481850 | 0.859632 | 3.615669e-63 | -8.615850e-47 |
| Msa0341880 | Msa0481850 | 0.834112 | 3.618364e-56 | -8.615850e-47 |
| Msa0348830 | Msa0481850 | 0.843448 | 1.392394e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481850 | MtrunA17_Chr7g0266661 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.02e-92 | 263 |
| Msa0481850 | MtrunA17_Chr1g0178381 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.02e-92 | 263 |
| Msa0481850 | MtrunA17_Chr3g0127481 | 100.000 | 128 | 0 | 0 | 1 | 128 | 1 | 128 | 1.02e-92 | 263 |
| Msa0481850 | MtrunA17_Chr6g0475951 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 7.56e-51 | 155 |
| Msa0481850 | MtrunA17_Chr4g0037241 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 7.41e-50 | 155 |
| Msa0481850 | MtrunA17_Chr4g0037241 | 62.162 | 74 | 28 | 0 | 3 | 76 | 79 | 152 | 1.45e-26 | 96.7 |
| Msa0481850 | MtrunA17_Chr5g0444101 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 7.41e-50 | 155 |
| Msa0481850 | MtrunA17_Chr5g0444101 | 62.162 | 74 | 28 | 0 | 3 | 76 | 79 | 152 | 1.45e-26 | 96.7 |
| Msa0481850 | MtrunA17_Chr6g0475961 | 98.701 | 77 | 1 | 0 | 1 | 77 | 4 | 80 | 8.42e-50 | 157 |
| Msa0481850 | MtrunA17_Chr6g0475961 | 98.701 | 77 | 1 | 0 | 1 | 77 | 80 | 156 | 8.42e-50 | 157 |
| Msa0481850 | MtrunA17_Chr6g0475961 | 100.000 | 37 | 0 | 0 | 1 | 37 | 156 | 192 | 5.25e-18 | 75.9 |
| Msa0481850 | MtrunA17_Chr8g0380181 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.14e-49 | 155 |
| Msa0481850 | MtrunA17_Chr5g0413361 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.22e-49 | 155 |
| Msa0481850 | MtrunA17_Chr7g0274921 | 98.701 | 77 | 1 | 0 | 1 | 77 | 3 | 79 | 2.98e-49 | 157 |
| Msa0481850 | MtrunA17_Chr7g0274921 | 98.701 | 77 | 1 | 0 | 1 | 77 | 79 | 155 | 2.98e-49 | 157 |
| Msa0481850 | MtrunA17_Chr7g0274921 | 98.701 | 77 | 1 | 0 | 1 | 77 | 155 | 231 | 4.05e-49 | 156 |
| Msa0481850 | MtrunA17_Chr1g0181441 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 4.38e-49 | 156 |
| Msa0481850 | MtrunA17_Chr1g0181441 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 4.38e-49 | 156 |
| Msa0481850 | MtrunA17_Chr1g0181441 | 100.000 | 76 | 0 | 0 | 1 | 76 | 153 | 228 | 6.69e-49 | 156 |
| Msa0481850 | MtrunA17_Chr4g0041751 | 97.403 | 77 | 2 | 0 | 1 | 77 | 77 | 153 | 1.10e-48 | 155 |
| Msa0481850 | MtrunA17_Chr4g0041751 | 97.403 | 77 | 2 | 0 | 1 | 77 | 1 | 77 | 2.02e-48 | 154 |
| Msa0481850 | MtrunA17_Chr4g0041751 | 69.737 | 76 | 23 | 0 | 1 | 76 | 153 | 228 | 4.53e-30 | 107 |
| Msa0481850 | MtrunA17_Chr8g0377821 | 98.701 | 77 | 1 | 0 | 1 | 77 | 9 | 85 | 2.18e-47 | 156 |
| Msa0481850 | MtrunA17_Chr8g0377821 | 98.701 | 77 | 1 | 0 | 1 | 77 | 85 | 161 | 2.18e-47 | 156 |
| Msa0481850 | MtrunA17_Chr8g0377821 | 98.701 | 77 | 1 | 0 | 1 | 77 | 161 | 237 | 2.18e-47 | 156 |
| Msa0481850 | MtrunA17_Chr8g0377821 | 98.701 | 77 | 1 | 0 | 1 | 77 | 237 | 313 | 2.18e-47 | 156 |
| Msa0481850 | MtrunA17_Chr8g0377821 | 100.000 | 76 | 0 | 0 | 1 | 76 | 313 | 388 | 3.31e-47 | 156 |
| Msa0481850 | MtrunA17_Chr4g0046801 | 98.701 | 77 | 1 | 0 | 1 | 77 | 4 | 80 | 6.56e-47 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046801 | 98.701 | 77 | 1 | 0 | 1 | 77 | 80 | 156 | 6.56e-47 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046801 | 98.701 | 77 | 1 | 0 | 1 | 77 | 156 | 232 | 6.56e-47 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046801 | 98.701 | 77 | 1 | 0 | 1 | 77 | 232 | 308 | 6.56e-47 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046801 | 98.701 | 77 | 1 | 0 | 1 | 77 | 308 | 384 | 6.56e-47 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046801 | 98.701 | 77 | 1 | 0 | 1 | 77 | 384 | 460 | 8.81e-47 | 156 |
| Msa0481850 | MtrunA17_Chr4g0041641 | 98.701 | 77 | 1 | 0 | 1 | 77 | 5 | 81 | 7.41e-47 | 156 |
| Msa0481850 | MtrunA17_Chr4g0041641 | 98.701 | 77 | 1 | 0 | 1 | 77 | 81 | 157 | 7.41e-47 | 156 |
| Msa0481850 | MtrunA17_Chr4g0041641 | 98.701 | 77 | 1 | 0 | 1 | 77 | 157 | 233 | 7.41e-47 | 156 |
| Msa0481850 | MtrunA17_Chr4g0041641 | 98.701 | 77 | 1 | 0 | 1 | 77 | 233 | 309 | 7.41e-47 | 156 |
| Msa0481850 | MtrunA17_Chr4g0041641 | 98.701 | 77 | 1 | 0 | 1 | 77 | 309 | 385 | 7.41e-47 | 156 |
| Msa0481850 | MtrunA17_Chr4g0041641 | 98.701 | 77 | 1 | 0 | 1 | 77 | 385 | 461 | 9.86e-47 | 156 |
| Msa0481850 | MtrunA17_Chr8g0374171 | 96.104 | 77 | 3 | 0 | 1 | 77 | 74 | 150 | 1.51e-46 | 148 |
| Msa0481850 | MtrunA17_Chr8g0374171 | 91.429 | 35 | 3 | 0 | 43 | 77 | 40 | 74 | 2.72e-15 | 68.2 |
| Msa0481850 | MtrunA17_Chr4g0041701 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.93e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0041701 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.93e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0041701 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.93e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0041701 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.93e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0041701 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 1.93e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0041701 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.93e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0041701 | 100.000 | 76 | 0 | 0 | 1 | 76 | 457 | 532 | 2.86e-46 | 156 |
| Msa0481850 | MtrunA17_Chr4g0048591 | 98.701 | 77 | 1 | 0 | 1 | 77 | 4 | 80 | 2.01e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0048591 | 98.701 | 77 | 1 | 0 | 1 | 77 | 80 | 156 | 2.01e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0048591 | 98.701 | 77 | 1 | 0 | 1 | 77 | 156 | 232 | 2.01e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0048591 | 98.701 | 77 | 1 | 0 | 1 | 77 | 232 | 308 | 2.01e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0048591 | 98.701 | 77 | 1 | 0 | 1 | 77 | 384 | 460 | 2.01e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0048591 | 98.701 | 77 | 1 | 0 | 1 | 77 | 460 | 536 | 2.69e-46 | 156 |
| Msa0481850 | MtrunA17_Chr4g0048591 | 96.104 | 77 | 3 | 0 | 1 | 77 | 308 | 384 | 7.64e-45 | 152 |
| Msa0481850 | MtrunA17_Chr8g0342711 | 98.701 | 77 | 1 | 0 | 1 | 77 | 4 | 80 | 2.03e-46 | 157 |
| Msa0481850 | MtrunA17_Chr8g0342711 | 98.701 | 77 | 1 | 0 | 1 | 77 | 80 | 156 | 2.03e-46 | 157 |
| Msa0481850 | MtrunA17_Chr8g0342711 | 98.701 | 77 | 1 | 0 | 1 | 77 | 156 | 232 | 2.03e-46 | 157 |
| Msa0481850 | MtrunA17_Chr8g0342711 | 98.701 | 77 | 1 | 0 | 1 | 77 | 232 | 308 | 2.03e-46 | 157 |
| Msa0481850 | MtrunA17_Chr8g0342711 | 98.701 | 77 | 1 | 0 | 1 | 77 | 308 | 384 | 2.03e-46 | 157 |
| Msa0481850 | MtrunA17_Chr8g0342711 | 98.701 | 77 | 1 | 0 | 1 | 77 | 384 | 460 | 2.03e-46 | 157 |
| Msa0481850 | MtrunA17_Chr8g0342711 | 98.701 | 77 | 1 | 0 | 1 | 77 | 460 | 536 | 2.75e-46 | 156 |
| Msa0481850 | MtrunA17_Chr4g0046831 | 98.701 | 77 | 1 | 0 | 1 | 77 | 80 | 156 | 3.74e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046831 | 98.701 | 77 | 1 | 0 | 1 | 77 | 156 | 232 | 3.74e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046831 | 98.701 | 77 | 1 | 0 | 1 | 77 | 232 | 308 | 3.74e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046831 | 98.701 | 77 | 1 | 0 | 1 | 77 | 368 | 444 | 3.74e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046831 | 98.701 | 77 | 1 | 0 | 1 | 77 | 444 | 520 | 3.74e-46 | 157 |
| Msa0481850 | MtrunA17_Chr4g0046831 | 98.701 | 77 | 1 | 0 | 1 | 77 | 520 | 596 | 4.99e-46 | 156 |
| Msa0481850 | MtrunA17_Chr4g0046831 | 97.403 | 77 | 2 | 0 | 1 | 77 | 4 | 80 | 1.00e-44 | 153 |
| Msa0481850 | MtrunA17_Chr4g0046831 | 77.922 | 77 | 1 | 1 | 1 | 77 | 308 | 368 | 2.06e-30 | 114 |
| Msa0481850 | MtrunA17_Chr1g0169371 | 71.053 | 76 | 22 | 0 | 1 | 76 | 215 | 290 | 1.24e-28 | 105 |
| Msa0481850 | MtrunA17_Chr5g0433721 | 68.831 | 77 | 23 | 1 | 1 | 76 | 194 | 270 | 8.58e-28 | 103 |
| Msa0481850 | MtrunA17_Chr5g0433631 | 69.863 | 73 | 22 | 0 | 1 | 73 | 266 | 338 | 6.78e-27 | 102 |
| Msa0481850 | MtrunA17_Chr5g0428191 | 68.421 | 76 | 24 | 0 | 1 | 76 | 241 | 316 | 1.37e-25 | 98.2 |
| Msa0481850 | MtrunA17_Chr5g0424981 | 60.000 | 75 | 30 | 0 | 1 | 75 | 2 | 76 | 3.91e-25 | 90.9 |
| Msa0481850 | MtrunA17_Chr8g0374161 | 100.000 | 44 | 0 | 0 | 1 | 44 | 9 | 52 | 6.52e-25 | 89.7 |
| Msa0481850 | MtrunA17_Chr2g0298951 | 61.333 | 75 | 29 | 0 | 1 | 75 | 236 | 310 | 2.58e-23 | 92.0 |
| Msa0481850 | MtrunA17_Chr5g0433411 | 64.384 | 73 | 26 | 0 | 1 | 73 | 267 | 339 | 3.02e-23 | 92.4 |
| Msa0481850 | MtrunA17_Chr5g0433521 | 61.333 | 75 | 29 | 0 | 1 | 75 | 240 | 314 | 6.32e-23 | 90.9 |
| Msa0481850 | MtrunA17_Chr5g0433661 | 65.333 | 75 | 26 | 0 | 1 | 75 | 278 | 352 | 7.21e-23 | 91.3 |
| Msa0481850 | MtrunA17_Chr5g0433681 | 59.211 | 76 | 30 | 1 | 1 | 75 | 1 | 76 | 7.73e-23 | 85.1 |
| Msa0481850 | MtrunA17_Chr7g0259431 | 58.667 | 75 | 31 | 0 | 1 | 75 | 223 | 297 | 7.85e-22 | 87.8 |
| Msa0481850 | MtrunA17_Chr2g0298941 | 60.000 | 75 | 30 | 0 | 1 | 75 | 177 | 251 | 8.46e-22 | 87.0 |
| Msa0481850 | MtrunA17_Chr1g0169401 | 60.000 | 70 | 28 | 0 | 7 | 76 | 2 | 71 | 3.12e-21 | 80.9 |
| Msa0481850 | MtrunA17_Chr4g0003111 | 53.333 | 75 | 35 | 0 | 1 | 75 | 4 | 78 | 7.83e-21 | 80.1 |
| Msa0481850 | MtrunA17_Chr5g0433531 | 57.333 | 75 | 31 | 1 | 1 | 74 | 244 | 318 | 2.69e-19 | 81.3 |
| Msa0481850 | MtrunA17_Chr5g0433701 | 58.824 | 68 | 27 | 1 | 1 | 67 | 1 | 68 | 7.43e-19 | 75.5 |
| Msa0481850 | MtrunA17_Chr7g0223111 | 60.526 | 76 | 29 | 1 | 1 | 75 | 267 | 342 | 9.10e-19 | 80.1 |
| Msa0481850 | MtrunA17_Chr5g0424971 | 53.333 | 75 | 35 | 0 | 1 | 75 | 252 | 326 | 5.45e-18 | 77.8 |
| Msa0481850 | MtrunA17_Chr5g0433391 | 48.684 | 76 | 38 | 1 | 1 | 75 | 8 | 83 | 9.08e-16 | 67.4 |
| Msa0481850 | MtrunA17_Chr5g0433711 | 58.333 | 60 | 25 | 0 | 15 | 74 | 4 | 63 | 4.43e-15 | 65.1 |
| Msa0481850 | MtrunA17_Chr5g0433381 | 50.649 | 77 | 36 | 2 | 1 | 75 | 9 | 85 | 9.67e-15 | 64.7 |
| Msa0481850 | MtrunA17_Chr4g0041621 | 76.471 | 34 | 8 | 0 | 44 | 77 | 11 | 44 | 5.10e-12 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481850 | AT2G36170.1 | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 4.98e-91 | 259 |
| Msa0481850 | AT3G52590.1 | 98.438 | 128 | 2 | 0 | 1 | 128 | 1 | 128 | 4.98e-91 | 259 |
| Msa0481850 | AT4G05320.7 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.79e-50 | 156 |
| Msa0481850 | AT4G05320.7 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.61e-50 | 156 |
| Msa0481850 | AT4G05050.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.79e-50 | 156 |
| Msa0481850 | AT4G05050.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 7.61e-50 | 156 |
| Msa0481850 | AT2G35635.1 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.02e-49 | 155 |
| Msa0481850 | AT2G35635.1 | 60.526 | 76 | 30 | 0 | 3 | 78 | 79 | 154 | 2.08e-26 | 96.7 |
| Msa0481850 | AT2G47110.2 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.54e-49 | 155 |
| Msa0481850 | AT2G47110.1 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.54e-49 | 155 |
| Msa0481850 | AT1G31340.1 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.58e-49 | 155 |
| Msa0481850 | AT1G31340.1 | 62.667 | 75 | 28 | 0 | 3 | 77 | 79 | 153 | 5.35e-27 | 98.6 |
| Msa0481850 | AT3G62250.1 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.77e-49 | 155 |
| Msa0481850 | AT1G23410.1 | 100.000 | 76 | 0 | 0 | 1 | 76 | 1 | 76 | 1.78e-49 | 155 |
| Msa0481850 | AT4G02890.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.16e-49 | 156 |
| Msa0481850 | AT4G02890.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 5.16e-49 | 156 |
| Msa0481850 | AT4G02890.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.92e-49 | 156 |
| Msa0481850 | AT4G02890.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.16e-49 | 156 |
| Msa0481850 | AT4G02890.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 5.16e-49 | 156 |
| Msa0481850 | AT4G02890.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.92e-49 | 156 |
| Msa0481850 | AT4G05050.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.16e-49 | 156 |
| Msa0481850 | AT4G05050.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 5.16e-49 | 156 |
| Msa0481850 | AT4G05050.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.92e-49 | 156 |
| Msa0481850 | AT4G05050.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.16e-49 | 156 |
| Msa0481850 | AT4G05050.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 5.16e-49 | 156 |
| Msa0481850 | AT4G05050.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.92e-49 | 156 |
| Msa0481850 | AT4G05050.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 5.16e-49 | 156 |
| Msa0481850 | AT4G05050.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 5.16e-49 | 156 |
| Msa0481850 | AT4G05050.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 6.92e-49 | 156 |
| Msa0481850 | AT1G55060.1 | 97.403 | 77 | 2 | 0 | 1 | 77 | 77 | 153 | 1.98e-48 | 155 |
| Msa0481850 | AT1G55060.1 | 97.368 | 76 | 2 | 0 | 1 | 76 | 153 | 228 | 2.56e-46 | 149 |
| Msa0481850 | AT1G55060.1 | 85.714 | 77 | 11 | 0 | 1 | 77 | 1 | 77 | 2.39e-42 | 139 |
| Msa0481850 | AT4G05320.5 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.48e-48 | 157 |
| Msa0481850 | AT4G05320.5 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.48e-48 | 157 |
| Msa0481850 | AT4G05320.5 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.48e-48 | 157 |
| Msa0481850 | AT4G05320.5 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.65e-48 | 156 |
| Msa0481850 | AT4G05320.8 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.48e-48 | 157 |
| Msa0481850 | AT4G05320.8 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.48e-48 | 157 |
| Msa0481850 | AT4G05320.8 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.48e-48 | 157 |
| Msa0481850 | AT4G05320.8 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.65e-48 | 156 |
| Msa0481850 | AT4G02890.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.48e-48 | 157 |
| Msa0481850 | AT4G02890.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.48e-48 | 157 |
| Msa0481850 | AT4G02890.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.48e-48 | 157 |
| Msa0481850 | AT4G02890.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.65e-48 | 156 |
| Msa0481850 | AT4G02890.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.48e-48 | 157 |
| Msa0481850 | AT4G02890.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.48e-48 | 157 |
| Msa0481850 | AT4G02890.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.48e-48 | 157 |
| Msa0481850 | AT4G02890.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 4.65e-48 | 156 |
| Msa0481850 | AT5G03240.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.3 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.49e-48 | 156 |
| Msa0481850 | AT5G03240.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.2 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.49e-48 | 156 |
| Msa0481850 | AT5G03240.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.64e-48 | 156 |
| Msa0481850 | AT5G03240.1 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.49e-48 | 156 |
| Msa0481850 | AT5G20620.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 3.64e-48 | 156 |
| Msa0481850 | AT5G20620.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 3.64e-48 | 156 |
| Msa0481850 | AT5G20620.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 3.64e-48 | 156 |
| Msa0481850 | AT5G20620.2 | 100.000 | 76 | 0 | 0 | 1 | 76 | 229 | 304 | 5.49e-48 | 156 |
| Msa0481850 | AT1G65350.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 6.38e-48 | 156 |
| Msa0481850 | AT1G65350.1 | 97.403 | 77 | 2 | 0 | 1 | 77 | 152 | 228 | 9.64e-47 | 153 |
| Msa0481850 | AT1G65350.1 | 97.403 | 77 | 1 | 1 | 1 | 77 | 77 | 152 | 7.14e-45 | 148 |
| Msa0481850 | AT1G65350.1 | 80.000 | 90 | 4 | 1 | 1 | 76 | 228 | 317 | 6.29e-39 | 133 |
| Msa0481850 | AT4G05320.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.68e-47 | 156 |
| Msa0481850 | AT4G05320.6 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.6 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.6 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.6 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.6 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.68e-47 | 156 |
| Msa0481850 | AT4G05320.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 1.99e-47 | 157 |
| Msa0481850 | AT4G05320.3 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 2.68e-47 | 156 |
| Msa0481850 | AT5G20620.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 2.05e-47 | 157 |
| Msa0481850 | AT5G20620.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 2.05e-47 | 157 |
| Msa0481850 | AT5G20620.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 2.05e-47 | 157 |
| Msa0481850 | AT5G20620.1 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 2.05e-47 | 157 |
| Msa0481850 | AT5G20620.1 | 100.000 | 76 | 0 | 0 | 1 | 76 | 305 | 380 | 3.08e-47 | 156 |
| Msa0481850 | AT5G37640.1 | 96.104 | 77 | 3 | 0 | 1 | 77 | 79 | 155 | 4.82e-47 | 154 |
| Msa0481850 | AT5G37640.1 | 92.208 | 77 | 6 | 0 | 1 | 77 | 155 | 231 | 7.21e-43 | 143 |
| Msa0481850 | AT5G37640.1 | 92.208 | 77 | 5 | 1 | 1 | 76 | 231 | 307 | 8.70e-41 | 138 |
| Msa0481850 | AT5G37640.1 | 77.922 | 77 | 17 | 0 | 1 | 77 | 3 | 79 | 5.19e-34 | 120 |
| Msa0481850 | AT4G05320.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.2 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.12e-46 | 156 |
| Msa0481850 | AT4G05320.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 1 | 77 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 77 | 153 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 153 | 229 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 229 | 305 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 305 | 381 | 8.32e-47 | 157 |
| Msa0481850 | AT4G05320.4 | 98.701 | 77 | 1 | 0 | 1 | 77 | 381 | 457 | 1.12e-46 | 156 |
| Msa0481850 | AT3G09790.2 | 92.208 | 77 | 6 | 0 | 1 | 77 | 79 | 155 | 3.53e-40 | 141 |
| Msa0481850 | AT3G09790.2 | 84.416 | 77 | 12 | 0 | 1 | 77 | 3 | 79 | 9.50e-37 | 132 |
| Msa0481850 | AT3G09790.2 | 79.730 | 74 | 15 | 0 | 1 | 74 | 552 | 625 | 2.29e-31 | 117 |
| Msa0481850 | AT3G09790.2 | 70.130 | 77 | 23 | 0 | 1 | 77 | 393 | 469 | 1.38e-28 | 109 |
| Msa0481850 | AT3G09790.2 | 73.684 | 76 | 18 | 1 | 1 | 74 | 319 | 394 | 3.40e-27 | 105 |
| Msa0481850 | AT3G09790.2 | 69.512 | 82 | 20 | 1 | 1 | 77 | 238 | 319 | 7.55e-27 | 104 |
| Msa0481850 | AT3G09790.2 | 67.073 | 82 | 20 | 2 | 1 | 75 | 155 | 236 | 3.77e-26 | 102 |
| Msa0481850 | AT3G09790.2 | 65.476 | 84 | 22 | 1 | 1 | 77 | 469 | 552 | 2.67e-25 | 100 |
| Msa0481850 | AT3G09790.1 | 92.208 | 77 | 6 | 0 | 1 | 77 | 79 | 155 | 3.53e-40 | 141 |
| Msa0481850 | AT3G09790.1 | 84.416 | 77 | 12 | 0 | 1 | 77 | 3 | 79 | 9.50e-37 | 132 |
| Msa0481850 | AT3G09790.1 | 79.730 | 74 | 15 | 0 | 1 | 74 | 552 | 625 | 2.29e-31 | 117 |
| Msa0481850 | AT3G09790.1 | 70.130 | 77 | 23 | 0 | 1 | 77 | 393 | 469 | 1.38e-28 | 109 |
| Msa0481850 | AT3G09790.1 | 73.684 | 76 | 18 | 1 | 1 | 74 | 319 | 394 | 3.40e-27 | 105 |
| Msa0481850 | AT3G09790.1 | 69.512 | 82 | 20 | 1 | 1 | 77 | 238 | 319 | 7.55e-27 | 104 |
| Msa0481850 | AT3G09790.1 | 67.073 | 82 | 20 | 2 | 1 | 75 | 155 | 236 | 3.77e-26 | 102 |
| Msa0481850 | AT3G09790.1 | 65.476 | 84 | 22 | 1 | 1 | 77 | 469 | 552 | 2.67e-25 | 100 |
| Msa0481850 | AT1G53930.1 | 75.342 | 73 | 18 | 0 | 1 | 73 | 86 | 158 | 6.64e-33 | 113 |
| Msa0481850 | AT1G53950.1 | 61.972 | 71 | 27 | 0 | 1 | 71 | 69 | 139 | 2.82e-25 | 93.6 |
| Msa0481850 | AT1G11980.1 | 55.263 | 76 | 34 | 0 | 1 | 76 | 1 | 76 | 2.91e-24 | 89.0 |
| Msa0481850 | AT1G53945.1 | 46.269 | 67 | 36 | 0 | 1 | 67 | 46 | 112 | 7.62e-13 | 61.2 |
| Msa0481850 | AT4G12570.1 | 38.667 | 75 | 45 | 1 | 1 | 74 | 95 | 169 | 4.34e-12 | 62.4 |
| Msa0481850 | AT5G42220.2 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 6.28e-12 | 61.6 |
| Msa0481850 | AT5G42220.1 | 38.889 | 72 | 44 | 0 | 1 | 72 | 24 | 95 | 6.28e-12 | 61.6 |
Find 45 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTATCAATGGATTATATTT+TGG | 0.155464 | 3_3:+88235762 | Msa0481850:three_prime_UTR |
| TTCTTCACCTTTGTCAGTTC+TGG | 0.265924 | 3_3:-88234313 | None:intergenic |
| GATGAAGAGTCGACTCCTTC+TGG | 0.282090 | 3_3:-88234632 | None:intergenic |
| TGAACCTTCTTTGATGGCTT+TGG | 0.289629 | 3_3:+88234683 | Msa0481850:CDS |
| GTTTACTTGATCTTCTTCTT+TGG | 0.291019 | 3_3:-88235615 | None:intergenic |
| AATGTAGTTGGAACTTATTT+TGG | 0.293751 | 3_3:+88235741 | Msa0481850:three_prime_UTR |
| TATCATTGAACCTTCTTTGA+TGG | 0.309911 | 3_3:+88234677 | Msa0481850:CDS |
| CACGAAGATCTGCATCTTTG+CGG | 0.340604 | 3_3:-88234337 | None:intergenic |
| CGACTCTTCATCTTGTTCTC+AGG | 0.368663 | 3_3:+88234643 | Msa0481850:CDS |
| TTATTATTGTATGGTATTCA+TGG | 0.384560 | 3_3:-88235855 | None:intergenic |
| CTTGCGGCAATTCACAGCCC+TGG | 0.385112 | 3_3:-88235467 | None:intergenic |
| ATCTTCGTGAAAACCCTAAC+CGG | 0.392499 | 3_3:+88234351 | Msa0481850:CDS |
| TAATTGATGTTGAATGTAGT+TGG | 0.402520 | 3_3:+88235729 | Msa0481850:three_prime_UTR |
| CGAAACGTACTTGCGGCAAA+TGG | 0.413865 | 3_3:-88234730 | None:intergenic |
| CATCTTGTTCTCAGGCTTCG+TGG | 0.432449 | 3_3:+88234651 | Msa0481850:CDS |
| ATACAATAATAACACCAATC+AGG | 0.437357 | 3_3:+88235866 | Msa0481850:three_prime_UTR |
| CTTGCCAAAGCCATCAAAGA+AGG | 0.438792 | 3_3:-88234687 | None:intergenic |
| TGATTGGTGTTATTATTGTA+TGG | 0.439574 | 3_3:-88235864 | None:intergenic |
| CTCTCTAGATAGACCCTGAT+TGG | 0.447584 | 3_3:-88235880 | None:intergenic |
| GAAGAAGATCAAGTAAACTT+TGG | 0.456271 | 3_3:+88235620 | Msa0481850:exon |
| AAAATCAATCGCTGCTGATC+CGG | 0.469570 | 3_3:-88234561 | None:intergenic |
| GCTGGTAAGCAGCTTGAAGA+TGG | 0.474946 | 3_3:+88234585 | Msa0481850:CDS |
| TTGCGGCAATTCACAGCCCT+GGG | 0.484020 | 3_3:-88235466 | None:intergenic |
| GTTATGCTCGTCTTCATCCC+AGG | 0.488696 | 3_3:+88235449 | Msa0481850:CDS |
| GAAGGCAAAGATTCAAGATA+AGG | 0.516683 | 3_3:+88234422 | Msa0481850:CDS |
| CTTCTTTGATGGCTTTGGCA+AGG | 0.516867 | 3_3:+88234688 | Msa0481850:CDS |
| GCTCTCGACCTCGAGGGTGA+TGG | 0.521344 | 3_3:-88234379 | None:intergenic |
| TACAATAATAACACCAATCA+GGG | 0.522284 | 3_3:+88235867 | Msa0481850:three_prime_UTR |
| CTGGATATTGTAATCAGCTA+AGG | 0.527740 | 3_3:-88234613 | None:intergenic |
| GTAAAGTTGCATGACATCAA+TGG | 0.527741 | 3_3:-88235828 | None:intergenic |
| ATCAATCGCTGCTGATCCGG+TGG | 0.556661 | 3_3:-88234558 | None:intergenic |
| TATGACCACACTTCTTCTTG+CGG | 0.587437 | 3_3:-88235483 | None:intergenic |
| TTATGCTCGTCTTCATCCCA+GGG | 0.594695 | 3_3:+88235450 | Msa0481850:CDS |
| TGTCACTGCTCTCGACCTCG+AGG | 0.600978 | 3_3:-88234386 | None:intergenic |
| GAAATAATCAGGTATTCCAC+CGG | 0.607938 | 3_3:+88234542 | Msa0481850:intron |
| GCAAAGATTCAAGATAAGGA+AGG | 0.611123 | 3_3:+88234426 | Msa0481850:CDS |
| GTCACTGCTCTCGACCTCGA+GGG | 0.618266 | 3_3:-88234385 | None:intergenic |
| TCTTCGTGAAAACCCTAACC+GGG | 0.632822 | 3_3:+88234352 | Msa0481850:CDS |
| TTTCCTTCCAGAACTGACAA+AGG | 0.642596 | 3_3:+88234306 | None:intergenic |
| AGCTGATTACAATATCCAGA+AGG | 0.645289 | 3_3:+88234617 | Msa0481850:CDS |
| AGTATCTCAGAACAAAACAA+AGG | 0.654319 | 3_3:-88235659 | None:intergenic |
| TGACACAATCGACAATGTGA+AGG | 0.654541 | 3_3:+88234404 | Msa0481850:CDS |
| CTTGTTCTCAGGCTTCGTGG+TGG | 0.665175 | 3_3:+88234654 | Msa0481850:CDS |
| CGGGAAAACCATCACCCTCG+AGG | 0.716475 | 3_3:+88234371 | Msa0481850:CDS |
| AATTGCCGCAAGAAGAAGTG+TGG | 0.732026 | 3_3:+88235478 | Msa0481850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATAAATAAAAGTGTAT+TGG | - | chr3_3:88235021-88235040 | None:intergenic | 10.0% |
| !!! | AATAATAAATAAAAGTGTAT+TGG | - | chr3_3:88235021-88235040 | None:intergenic | 10.0% |
| !!! | TTTTTATTCAATTTCATAGT+TGG | + | chr3_3:88235358-88235377 | Msa0481850:intron | 15.0% |
| !!! | TTTTTATTCAATTTCATAGT+TGG | + | chr3_3:88235358-88235377 | Msa0481850:intron | 15.0% |
| !! | TGATTGTGATATTAATGAAT+TGG | + | chr3_3:88234792-88234811 | Msa0481850:intron | 20.0% |
| !! | AAAAATCATTCAATTCAAAC+AGG | - | chr3_3:88234972-88234991 | None:intergenic | 20.0% |
| !!! | TTGCATAAGCTTTTTTTTTA+AGG | - | chr3_3:88235052-88235071 | None:intergenic | 20.0% |
| !! | TTATTATTGTATGGTATTCA+TGG | - | chr3_3:88235858-88235877 | None:intergenic | 20.0% |
| !! | TGATTGTGATATTAATGAAT+TGG | + | chr3_3:88234792-88234811 | Msa0481850:intron | 20.0% |
| !! | AAAAATCATTCAATTCAAAC+AGG | - | chr3_3:88234972-88234991 | None:intergenic | 20.0% |
| !!! | TTGCATAAGCTTTTTTTTTA+AGG | - | chr3_3:88235052-88235071 | None:intergenic | 20.0% |
| !! | TTATTATTGTATGGTATTCA+TGG | - | chr3_3:88235858-88235877 | None:intergenic | 20.0% |
| ! | GTTATGTATAAGCTCAAAAA+GGG | - | chr3_3:88234873-88234892 | None:intergenic | 25.0% |
| ! | TGTTATGTATAAGCTCAAAA+AGG | - | chr3_3:88234874-88234893 | None:intergenic | 25.0% |
| ! | TTATGCAATATATCCCATTT+AGG | + | chr3_3:88234945-88234964 | Msa0481850:intron | 25.0% |
| !!! | ATTGAATGATTTTTGAGCTT+AGG | + | chr3_3:88234978-88234997 | Msa0481850:intron | 25.0% |
| ! | TTTGTATAGCTGATATTGAT+GGG | + | chr3_3:88235196-88235215 | Msa0481850:intron | 25.0% |
| !!! | TTGTTGTTTAAAAGTGCAAT+TGG | + | chr3_3:88235237-88235256 | Msa0481850:intron | 25.0% |
| !! | TGTTGTTTAAAAGTGCAATT+GGG | + | chr3_3:88235238-88235257 | Msa0481850:intron | 25.0% |
| ! | GTAAGAAATGGATCATTATA+GGG | - | chr3_3:88235276-88235295 | None:intergenic | 25.0% |
| ! | AGTAAGAAATGGATCATTAT+AGG | - | chr3_3:88235277-88235296 | None:intergenic | 25.0% |
| ! | TTATTCAATTTCATAGTTGG+TGG | + | chr3_3:88235361-88235380 | Msa0481850:intron | 25.0% |
| !! | TTTTGATCTAAGTGTGAATT+TGG | + | chr3_3:88235409-88235428 | Msa0481850:intron | 25.0% |
| ! | TTTGATCTAAGTGTGAATTT+GGG | + | chr3_3:88235410-88235429 | Msa0481850:intron | 25.0% |
| !! | GTAATTTTGTGCTATGTTTT+TGG | + | chr3_3:88235538-88235557 | Msa0481850:intron | 25.0% |
| ! | CAACTGCAGTAAAAAAAAAA+AGG | - | chr3_3:88235592-88235611 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTACTGCAGTTG+AGG | + | chr3_3:88235592-88235611 | Msa0481850:intron | 25.0% |
| ! | TAATTGATGTTGAATGTAGT+TGG | + | chr3_3:88235729-88235748 | Msa0481850:three_prime_UTR | 25.0% |
| !! | AATGTAGTTGGAACTTATTT+TGG | + | chr3_3:88235741-88235760 | Msa0481850:three_prime_UTR | 25.0% |
| !!! | GGTATCAATGGATTATATTT+TGG | + | chr3_3:88235762-88235781 | Msa0481850:three_prime_UTR | 25.0% |
| !!! | TGATTGGTGTTATTATTGTA+TGG | - | chr3_3:88235867-88235886 | None:intergenic | 25.0% |
| ! | ATACAATAATAACACCAATC+AGG | + | chr3_3:88235866-88235885 | Msa0481850:three_prime_UTR | 25.0% |
| ! | TACAATAATAACACCAATCA+GGG | + | chr3_3:88235867-88235886 | Msa0481850:three_prime_UTR | 25.0% |
| ! | GTTATGTATAAGCTCAAAAA+GGG | - | chr3_3:88234873-88234892 | None:intergenic | 25.0% |
| ! | TGTTATGTATAAGCTCAAAA+AGG | - | chr3_3:88234874-88234893 | None:intergenic | 25.0% |
| ! | TTATGCAATATATCCCATTT+AGG | + | chr3_3:88234945-88234964 | Msa0481850:intron | 25.0% |
| !!! | ATTGAATGATTTTTGAGCTT+AGG | + | chr3_3:88234978-88234997 | Msa0481850:intron | 25.0% |
| ! | TTTGTATAGCTGATATTGAT+GGG | + | chr3_3:88235196-88235215 | Msa0481850:intron | 25.0% |
| !!! | TTGTTGTTTAAAAGTGCAAT+TGG | + | chr3_3:88235237-88235256 | Msa0481850:intron | 25.0% |
| !! | TGTTGTTTAAAAGTGCAATT+GGG | + | chr3_3:88235238-88235257 | Msa0481850:intron | 25.0% |
| ! | GTAAGAAATGGATCATTATA+GGG | - | chr3_3:88235276-88235295 | None:intergenic | 25.0% |
| ! | AGTAAGAAATGGATCATTAT+AGG | - | chr3_3:88235277-88235296 | None:intergenic | 25.0% |
| ! | TTATTCAATTTCATAGTTGG+TGG | + | chr3_3:88235361-88235380 | Msa0481850:intron | 25.0% |
| !! | TTTTGATCTAAGTGTGAATT+TGG | + | chr3_3:88235409-88235428 | Msa0481850:intron | 25.0% |
| ! | TTTGATCTAAGTGTGAATTT+GGG | + | chr3_3:88235410-88235429 | Msa0481850:intron | 25.0% |
| !! | GTAATTTTGTGCTATGTTTT+TGG | + | chr3_3:88235538-88235557 | Msa0481850:intron | 25.0% |
| ! | CAACTGCAGTAAAAAAAAAA+AGG | - | chr3_3:88235592-88235611 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTACTGCAGTTG+AGG | + | chr3_3:88235592-88235611 | Msa0481850:intron | 25.0% |
| ! | TAATTGATGTTGAATGTAGT+TGG | + | chr3_3:88235729-88235748 | Msa0481850:three_prime_UTR | 25.0% |
| !! | AATGTAGTTGGAACTTATTT+TGG | + | chr3_3:88235741-88235760 | Msa0481850:three_prime_UTR | 25.0% |
| !!! | GGTATCAATGGATTATATTT+TGG | + | chr3_3:88235762-88235781 | Msa0481850:three_prime_UTR | 25.0% |
| !!! | TGATTGGTGTTATTATTGTA+TGG | - | chr3_3:88235867-88235886 | None:intergenic | 25.0% |
| ! | ATACAATAATAACACCAATC+AGG | + | chr3_3:88235866-88235885 | Msa0481850:three_prime_UTR | 25.0% |
| ! | TACAATAATAACACCAATCA+GGG | + | chr3_3:88235867-88235886 | Msa0481850:three_prime_UTR | 25.0% |
| ! | CGCTTTTGAATGAAATAATC+AGG | + | chr3_3:88234531-88234550 | Msa0481850:intron | 30.0% |
| TATCATTGAACCTTCTTTGA+TGG | + | chr3_3:88234677-88234696 | Msa0481850:CDS | 30.0% | |
| AATTCAAACAGGACCTAAAT+GGG | - | chr3_3:88234961-88234980 | None:intergenic | 30.0% | |
| TAATTCATAAGTTCTCGCTA+AGG | - | chr3_3:88235079-88235098 | None:intergenic | 30.0% | |
| !!! | AGCTTTTAAGTTAATCCAGA+CGG | + | chr3_3:88235142-88235161 | Msa0481850:intron | 30.0% |
| ACCAGGACTAATTACATTAA+GGG | - | chr3_3:88235168-88235187 | None:intergenic | 30.0% | |
| AACCAGGACTAATTACATTA+AGG | - | chr3_3:88235169-88235188 | None:intergenic | 30.0% | |
| GTTTGTATAGCTGATATTGA+TGG | + | chr3_3:88235195-88235214 | Msa0481850:intron | 30.0% | |
| ! | GCACTTTTAAACAACAAAAG+AGG | - | chr3_3:88235234-88235253 | None:intergenic | 30.0% |
| ! | GTTGTTTAAAAGTGCAATTG+GGG | + | chr3_3:88235239-88235258 | Msa0481850:intron | 30.0% |
| CATTTCTTACTTTATCACCT+GGG | + | chr3_3:88235286-88235305 | Msa0481850:intron | 30.0% | |
| AACTGGAAAATATTAAACCC+AGG | - | chr3_3:88235306-88235325 | None:intergenic | 30.0% | |
| !!! | TTTCTCGATTTGGTACATTT+TGG | + | chr3_3:88235329-88235348 | Msa0481850:intron | 30.0% |
| TTGATCTAAGTGTGAATTTG+GGG | + | chr3_3:88235411-88235430 | Msa0481850:intron | 30.0% | |
| GTTTACTTGATCTTCTTCTT+TGG | - | chr3_3:88235618-88235637 | None:intergenic | 30.0% | |
| GAAGAAGATCAAGTAAACTT+TGG | + | chr3_3:88235620-88235639 | Msa0481850:exon | 30.0% | |
| AGTATCTCAGAACAAAACAA+AGG | - | chr3_3:88235662-88235681 | None:intergenic | 30.0% | |
| !!! | TTGTTCTGAGATACTTTTGA+TGG | + | chr3_3:88235667-88235686 | Msa0481850:three_prime_UTR | 30.0% |
| !! | TGAGATACTTTTGATGGTTT+TGG | + | chr3_3:88235673-88235692 | Msa0481850:three_prime_UTR | 30.0% |
| !! | GTTGTTACTTATCTTTTGAC+TGG | + | chr3_3:88235695-88235714 | Msa0481850:three_prime_UTR | 30.0% |
| !!! | GGAACTTATTTTGGTATCAA+TGG | + | chr3_3:88235750-88235769 | Msa0481850:three_prime_UTR | 30.0% |
| ! | CGCTTTTGAATGAAATAATC+AGG | + | chr3_3:88234531-88234550 | Msa0481850:intron | 30.0% |
| TATCATTGAACCTTCTTTGA+TGG | + | chr3_3:88234677-88234696 | Msa0481850:CDS | 30.0% | |
| AATTCAAACAGGACCTAAAT+GGG | - | chr3_3:88234961-88234980 | None:intergenic | 30.0% | |
| TAATTCATAAGTTCTCGCTA+AGG | - | chr3_3:88235079-88235098 | None:intergenic | 30.0% | |
| !!! | AGCTTTTAAGTTAATCCAGA+CGG | + | chr3_3:88235142-88235161 | Msa0481850:intron | 30.0% |
| ACCAGGACTAATTACATTAA+GGG | - | chr3_3:88235168-88235187 | None:intergenic | 30.0% | |
| AACCAGGACTAATTACATTA+AGG | - | chr3_3:88235169-88235188 | None:intergenic | 30.0% | |
| GTTTGTATAGCTGATATTGA+TGG | + | chr3_3:88235195-88235214 | Msa0481850:intron | 30.0% | |
| ! | GCACTTTTAAACAACAAAAG+AGG | - | chr3_3:88235234-88235253 | None:intergenic | 30.0% |
| ! | GTTGTTTAAAAGTGCAATTG+GGG | + | chr3_3:88235239-88235258 | Msa0481850:intron | 30.0% |
| CATTTCTTACTTTATCACCT+GGG | + | chr3_3:88235286-88235305 | Msa0481850:intron | 30.0% | |
| AACTGGAAAATATTAAACCC+AGG | - | chr3_3:88235306-88235325 | None:intergenic | 30.0% | |
| !!! | TTTCTCGATTTGGTACATTT+TGG | + | chr3_3:88235329-88235348 | Msa0481850:intron | 30.0% |
| TTGATCTAAGTGTGAATTTG+GGG | + | chr3_3:88235411-88235430 | Msa0481850:intron | 30.0% | |
| GTTTACTTGATCTTCTTCTT+TGG | - | chr3_3:88235618-88235637 | None:intergenic | 30.0% | |
| GAAGAAGATCAAGTAAACTT+TGG | + | chr3_3:88235620-88235639 | Msa0481850:exon | 30.0% | |
| AGTATCTCAGAACAAAACAA+AGG | - | chr3_3:88235662-88235681 | None:intergenic | 30.0% | |
| !!! | TTGTTCTGAGATACTTTTGA+TGG | + | chr3_3:88235667-88235686 | Msa0481850:three_prime_UTR | 30.0% |
| !! | TGAGATACTTTTGATGGTTT+TGG | + | chr3_3:88235673-88235692 | Msa0481850:three_prime_UTR | 30.0% |
| !! | GTTGTTACTTATCTTTTGAC+TGG | + | chr3_3:88235695-88235714 | Msa0481850:three_prime_UTR | 30.0% |
| !!! | GGAACTTATTTTGGTATCAA+TGG | + | chr3_3:88235750-88235769 | Msa0481850:three_prime_UTR | 30.0% |
| GAAGGCAAAGATTCAAGATA+AGG | + | chr3_3:88234422-88234441 | Msa0481850:CDS | 35.0% | |
| GCAAAGATTCAAGATAAGGA+AGG | + | chr3_3:88234426-88234445 | Msa0481850:CDS | 35.0% | |
| ! | ATTTCATTCAAAAGCGCGTT+TGG | - | chr3_3:88234527-88234546 | None:intergenic | 35.0% |
| GAAATAATCAGGTATTCCAC+CGG | + | chr3_3:88234542-88234561 | Msa0481850:intron | 35.0% | |
| CTGGATATTGTAATCAGCTA+AGG | - | chr3_3:88234616-88234635 | None:intergenic | 35.0% | |
| AGCTGATTACAATATCCAGA+AGG | + | chr3_3:88234617-88234636 | Msa0481850:CDS | 35.0% | |
| ATGGCTACATGAATCAAACA+AGG | - | chr3_3:88234850-88234869 | None:intergenic | 35.0% | |
| TGTATAAGCTCAAAAAGGGA+TGG | - | chr3_3:88234869-88234888 | None:intergenic | 35.0% | |
| CAATTCAAACAGGACCTAAA+TGG | - | chr3_3:88234962-88234981 | None:intergenic | 35.0% | |
| CCAGGTGATAAAGTAAGAAA+TGG | - | chr3_3:88235288-88235307 | None:intergenic | 35.0% | |
| CCATTTCTTACTTTATCACC+TGG | + | chr3_3:88235285-88235304 | Msa0481850:intron | 35.0% | |
| !! | TCCAGTTGATTTTCTCGATT+TGG | + | chr3_3:88235319-88235338 | Msa0481850:intron | 35.0% |
| ACCAAATCGAGAAAATCAAC+TGG | - | chr3_3:88235323-88235342 | None:intergenic | 35.0% | |
| ACAAAACAAACATCAGCACA+AGG | - | chr3_3:88235567-88235586 | None:intergenic | 35.0% | |
| !!! | TTGTGCTGATGTTTGTTTTG+TGG | + | chr3_3:88235566-88235585 | Msa0481850:intron | 35.0% |
| GTAAAGTTGCATGACATCAA+TGG | - | chr3_3:88235831-88235850 | None:intergenic | 35.0% | |
| GAAGGCAAAGATTCAAGATA+AGG | + | chr3_3:88234422-88234441 | Msa0481850:CDS | 35.0% | |
| GCAAAGATTCAAGATAAGGA+AGG | + | chr3_3:88234426-88234445 | Msa0481850:CDS | 35.0% | |
| ! | ATTTCATTCAAAAGCGCGTT+TGG | - | chr3_3:88234527-88234546 | None:intergenic | 35.0% |
| GAAATAATCAGGTATTCCAC+CGG | + | chr3_3:88234542-88234561 | Msa0481850:intron | 35.0% | |
| CTGGATATTGTAATCAGCTA+AGG | - | chr3_3:88234616-88234635 | None:intergenic | 35.0% | |
| AGCTGATTACAATATCCAGA+AGG | + | chr3_3:88234617-88234636 | Msa0481850:CDS | 35.0% | |
| ATGGCTACATGAATCAAACA+AGG | - | chr3_3:88234850-88234869 | None:intergenic | 35.0% | |
| TGTATAAGCTCAAAAAGGGA+TGG | - | chr3_3:88234869-88234888 | None:intergenic | 35.0% | |
| CAATTCAAACAGGACCTAAA+TGG | - | chr3_3:88234962-88234981 | None:intergenic | 35.0% | |
| CCAGGTGATAAAGTAAGAAA+TGG | - | chr3_3:88235288-88235307 | None:intergenic | 35.0% | |
| CCATTTCTTACTTTATCACC+TGG | + | chr3_3:88235285-88235304 | Msa0481850:intron | 35.0% | |
| !! | TCCAGTTGATTTTCTCGATT+TGG | + | chr3_3:88235319-88235338 | Msa0481850:intron | 35.0% |
| ACCAAATCGAGAAAATCAAC+TGG | - | chr3_3:88235323-88235342 | None:intergenic | 35.0% | |
| ACAAAACAAACATCAGCACA+AGG | - | chr3_3:88235567-88235586 | None:intergenic | 35.0% | |
| !!! | TTGTGCTGATGTTTGTTTTG+TGG | + | chr3_3:88235566-88235585 | Msa0481850:intron | 35.0% |
| GTAAAGTTGCATGACATCAA+TGG | - | chr3_3:88235831-88235850 | None:intergenic | 35.0% | |
| ATCTTCGTGAAAACCCTAAC+CGG | + | chr3_3:88234351-88234370 | Msa0481850:CDS | 40.0% | |
| TGACACAATCGACAATGTGA+AGG | + | chr3_3:88234404-88234423 | Msa0481850:CDS | 40.0% | |
| AAAATCAATCGCTGCTGATC+CGG | - | chr3_3:88234564-88234583 | None:intergenic | 40.0% | |
| ! | TGAACCTTCTTTGATGGCTT+TGG | + | chr3_3:88234683-88234702 | Msa0481850:CDS | 40.0% |
| GAAATGACGAAACGTACTTG+CGG | - | chr3_3:88234740-88234759 | None:intergenic | 40.0% | |
| TAATTACATTAAGGGCCGTC+TGG | - | chr3_3:88235160-88235179 | None:intergenic | 40.0% | |
| GCCCTTAATGTAATTAGTCC+TGG | + | chr3_3:88235164-88235183 | Msa0481850:intron | 40.0% | |
| CTATACAAACAACAGCAACC+AGG | - | chr3_3:88235185-88235204 | None:intergenic | 40.0% | |
| TATGACCACACTTCTTCTTG+CGG | - | chr3_3:88235486-88235505 | None:intergenic | 40.0% | |
| ATCTTCGTGAAAACCCTAAC+CGG | + | chr3_3:88234351-88234370 | Msa0481850:CDS | 40.0% | |
| TGACACAATCGACAATGTGA+AGG | + | chr3_3:88234404-88234423 | Msa0481850:CDS | 40.0% | |
| AAAATCAATCGCTGCTGATC+CGG | - | chr3_3:88234564-88234583 | None:intergenic | 40.0% | |
| ! | TGAACCTTCTTTGATGGCTT+TGG | + | chr3_3:88234683-88234702 | Msa0481850:CDS | 40.0% |
| GAAATGACGAAACGTACTTG+CGG | - | chr3_3:88234740-88234759 | None:intergenic | 40.0% | |
| TAATTACATTAAGGGCCGTC+TGG | - | chr3_3:88235160-88235179 | None:intergenic | 40.0% | |
| GCCCTTAATGTAATTAGTCC+TGG | + | chr3_3:88235164-88235183 | Msa0481850:intron | 40.0% | |
| CTATACAAACAACAGCAACC+AGG | - | chr3_3:88235185-88235204 | None:intergenic | 40.0% | |
| TATGACCACACTTCTTCTTG+CGG | - | chr3_3:88235486-88235505 | None:intergenic | 40.0% | |
| CACGAAGATCTGCATCTTTG+CGG | - | chr3_3:88234340-88234359 | None:intergenic | 45.0% | |
| TCTTCGTGAAAACCCTAACC+GGG | + | chr3_3:88234352-88234371 | Msa0481850:CDS | 45.0% | |
| CGACTCTTCATCTTGTTCTC+AGG | + | chr3_3:88234643-88234662 | Msa0481850:CDS | 45.0% | |
| CTTGCCAAAGCCATCAAAGA+AGG | - | chr3_3:88234690-88234709 | None:intergenic | 45.0% | |
| !! | CTTCTTTGATGGCTTTGGCA+AGG | + | chr3_3:88234688-88234707 | Msa0481850:CDS | 45.0% |
| !!! | TGCGGCAAATGGTTTTGTCT+TGG | - | chr3_3:88234722-88234741 | None:intergenic | 45.0% |
| TTATGCTCGTCTTCATCCCA+GGG | + | chr3_3:88235450-88235469 | Msa0481850:CDS | 45.0% | |
| AATTGCCGCAAGAAGAAGTG+TGG | + | chr3_3:88235478-88235497 | Msa0481850:CDS | 45.0% | |
| CTCTCTAGATAGACCCTGAT+TGG | - | chr3_3:88235883-88235902 | None:intergenic | 45.0% | |
| CACGAAGATCTGCATCTTTG+CGG | - | chr3_3:88234340-88234359 | None:intergenic | 45.0% | |
| TCTTCGTGAAAACCCTAACC+GGG | + | chr3_3:88234352-88234371 | Msa0481850:CDS | 45.0% | |
| CGACTCTTCATCTTGTTCTC+AGG | + | chr3_3:88234643-88234662 | Msa0481850:CDS | 45.0% | |
| CTTGCCAAAGCCATCAAAGA+AGG | - | chr3_3:88234690-88234709 | None:intergenic | 45.0% | |
| !! | CTTCTTTGATGGCTTTGGCA+AGG | + | chr3_3:88234688-88234707 | Msa0481850:CDS | 45.0% |
| !!! | TGCGGCAAATGGTTTTGTCT+TGG | - | chr3_3:88234722-88234741 | None:intergenic | 45.0% |
| TTATGCTCGTCTTCATCCCA+GGG | + | chr3_3:88235450-88235469 | Msa0481850:CDS | 45.0% | |
| AATTGCCGCAAGAAGAAGTG+TGG | + | chr3_3:88235478-88235497 | Msa0481850:CDS | 45.0% | |
| CTCTCTAGATAGACCCTGAT+TGG | - | chr3_3:88235883-88235902 | None:intergenic | 45.0% | |
| !! | GGTGATGGTTTTCCCGGTTA+GGG | - | chr3_3:88234367-88234386 | None:intergenic | 50.0% |
| !! | CAGCAGCGATTGATTTTCGC+TGG | + | chr3_3:88234567-88234586 | Msa0481850:CDS | 50.0% |
| GCTGGTAAGCAGCTTGAAGA+TGG | + | chr3_3:88234585-88234604 | Msa0481850:CDS | 50.0% | |
| ! | GATGAAGAGTCGACTCCTTC+TGG | - | chr3_3:88234635-88234654 | None:intergenic | 50.0% |
| CATCTTGTTCTCAGGCTTCG+TGG | + | chr3_3:88234651-88234670 | Msa0481850:CDS | 50.0% | |
| CGAAACGTACTTGCGGCAAA+TGG | - | chr3_3:88234733-88234752 | None:intergenic | 50.0% | |
| GTTATGCTCGTCTTCATCCC+AGG | + | chr3_3:88235449-88235468 | Msa0481850:CDS | 50.0% | |
| !! | GGTGATGGTTTTCCCGGTTA+GGG | - | chr3_3:88234367-88234386 | None:intergenic | 50.0% |
| !! | CAGCAGCGATTGATTTTCGC+TGG | + | chr3_3:88234567-88234586 | Msa0481850:CDS | 50.0% |
| GCTGGTAAGCAGCTTGAAGA+TGG | + | chr3_3:88234585-88234604 | Msa0481850:CDS | 50.0% | |
| ! | GATGAAGAGTCGACTCCTTC+TGG | - | chr3_3:88234635-88234654 | None:intergenic | 50.0% |
| CATCTTGTTCTCAGGCTTCG+TGG | + | chr3_3:88234651-88234670 | Msa0481850:CDS | 50.0% | |
| CGAAACGTACTTGCGGCAAA+TGG | - | chr3_3:88234733-88234752 | None:intergenic | 50.0% | |
| GTTATGCTCGTCTTCATCCC+AGG | + | chr3_3:88235449-88235468 | Msa0481850:CDS | 50.0% | |
| !! | GGGTGATGGTTTTCCCGGTT+AGG | - | chr3_3:88234368-88234387 | None:intergenic | 55.0% |
| !! | CTCGAGGGTGATGGTTTTCC+CGG | - | chr3_3:88234373-88234392 | None:intergenic | 55.0% |
| ATCAATCGCTGCTGATCCGG+TGG | - | chr3_3:88234561-88234580 | None:intergenic | 55.0% | |
| CTTGTTCTCAGGCTTCGTGG+TGG | + | chr3_3:88234654-88234673 | Msa0481850:CDS | 55.0% | |
| TTGCGGCAATTCACAGCCCT+GGG | - | chr3_3:88235469-88235488 | None:intergenic | 55.0% | |
| !! | GGGTGATGGTTTTCCCGGTT+AGG | - | chr3_3:88234368-88234387 | None:intergenic | 55.0% |
| !! | CTCGAGGGTGATGGTTTTCC+CGG | - | chr3_3:88234373-88234392 | None:intergenic | 55.0% |
| ATCAATCGCTGCTGATCCGG+TGG | - | chr3_3:88234561-88234580 | None:intergenic | 55.0% | |
| CTTGTTCTCAGGCTTCGTGG+TGG | + | chr3_3:88234654-88234673 | Msa0481850:CDS | 55.0% | |
| TTGCGGCAATTCACAGCCCT+GGG | - | chr3_3:88235469-88235488 | None:intergenic | 55.0% | |
| CGGGAAAACCATCACCCTCG+AGG | + | chr3_3:88234371-88234390 | Msa0481850:CDS | 60.0% | |
| GTCACTGCTCTCGACCTCGA+GGG | - | chr3_3:88234388-88234407 | None:intergenic | 60.0% | |
| TGTCACTGCTCTCGACCTCG+AGG | - | chr3_3:88234389-88234408 | None:intergenic | 60.0% | |
| CTTGCGGCAATTCACAGCCC+TGG | - | chr3_3:88235470-88235489 | None:intergenic | 60.0% | |
| CGGGAAAACCATCACCCTCG+AGG | + | chr3_3:88234371-88234390 | Msa0481850:CDS | 60.0% | |
| GTCACTGCTCTCGACCTCGA+GGG | - | chr3_3:88234388-88234407 | None:intergenic | 60.0% | |
| TGTCACTGCTCTCGACCTCG+AGG | - | chr3_3:88234389-88234408 | None:intergenic | 60.0% | |
| CTTGCGGCAATTCACAGCCC+TGG | - | chr3_3:88235470-88235489 | None:intergenic | 60.0% | |
| GCTCTCGACCTCGAGGGTGA+TGG | - | chr3_3:88234382-88234401 | None:intergenic | 65.0% | |
| GCTCTCGACCTCGAGGGTGA+TGG | - | chr3_3:88234382-88234401 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 88234316 | 88235942 | 88234316 | ID=Msa0481850;Name=Msa0481850 |
| chr3_3 | mRNA | 88234316 | 88235942 | 88234316 | ID=Msa0481850-mRNA-1;Parent=Msa0481850;Name=Msa0481850-mRNA-1;_AED=0.01;_eAED=0.01;_QI=29|1|1|1|1|1|4|307|128 |
| chr3_3 | exon | 88234316 | 88234447 | 88234316 | ID=Msa0481850-mRNA-1:exon:25653;Parent=Msa0481850-mRNA-1 |
| chr3_3 | exon | 88234553 | 88234742 | 88234553 | ID=Msa0481850-mRNA-1:exon:25654;Parent=Msa0481850-mRNA-1 |
| chr3_3 | exon | 88235447 | 88235513 | 88235447 | ID=Msa0481850-mRNA-1:exon:25655;Parent=Msa0481850-mRNA-1 |
| chr3_3 | exon | 88235609 | 88235942 | 88235609 | ID=Msa0481850-mRNA-1:exon:25656;Parent=Msa0481850-mRNA-1 |
| chr3_3 | five_prime_UTR | 88234316 | 88234344 | 88234316 | ID=Msa0481850-mRNA-1:five_prime_utr;Parent=Msa0481850-mRNA-1 |
| chr3_3 | CDS | 88234345 | 88234447 | 88234345 | ID=Msa0481850-mRNA-1:cds;Parent=Msa0481850-mRNA-1 |
| chr3_3 | CDS | 88234553 | 88234742 | 88234553 | ID=Msa0481850-mRNA-1:cds;Parent=Msa0481850-mRNA-1 |
| chr3_3 | CDS | 88235447 | 88235513 | 88235447 | ID=Msa0481850-mRNA-1:cds;Parent=Msa0481850-mRNA-1 |
| chr3_3 | CDS | 88235609 | 88235635 | 88235609 | ID=Msa0481850-mRNA-1:cds;Parent=Msa0481850-mRNA-1 |
| chr3_3 | three_prime_UTR | 88235636 | 88235942 | 88235636 | ID=Msa0481850-mRNA-1:three_prime_utr;Parent=Msa0481850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
