Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0752910 | sp|Q9SW09|RS101_ARATH | 81.935 | 155 | 23 | 1 | 31 | 185 | 1 | 150 | 2.83e-78 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0752910 | A0A072UEC5 | 99.515 | 206 | 1 | 0 | 5 | 210 | 2 | 207 | 1.19e-146 | 416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0752910 | 0.803702 | 3.072627e-49 | -8.615850e-47 |
| Msa0002790 | Msa0752910 | 0.803793 | 2.942277e-49 | -8.615850e-47 |
| Msa0027590 | Msa0752910 | 0.815104 | 1.096689e-51 | -8.615850e-47 |
| Msa0038980 | Msa0752910 | 0.802688 | 4.982622e-49 | -8.615850e-47 |
| Msa0075350 | Msa0752910 | 0.837528 | 4.930346e-57 | -8.615850e-47 |
| Msa0116130 | Msa0752910 | 0.820014 | 8.580662e-53 | -8.615850e-47 |
| Msa0116670 | Msa0752910 | 0.811547 | 6.627875e-51 | -8.615850e-47 |
| Msa0604960 | Msa0752910 | 0.860540 | 1.923257e-63 | -8.615850e-47 |
| Msa0617540 | Msa0752910 | 0.801438 | 9.004816e-49 | -8.615850e-47 |
| Msa0622750 | Msa0752910 | 0.806750 | 7.067853e-50 | -8.615850e-47 |
| Msa0683660 | Msa0752910 | 0.856939 | 2.290878e-62 | -8.615850e-47 |
| Msa0705800 | Msa0752910 | 0.849558 | 2.994068e-60 | -8.615850e-47 |
| Msa0711960 | Msa0752910 | 0.815138 | 1.077786e-51 | -8.615850e-47 |
| Msa0712610 | Msa0752910 | 0.919155 | 6.403819e-87 | -8.615850e-47 |
| Msa0729200 | Msa0752910 | 0.838219 | 3.274911e-57 | -8.615850e-47 |
| Msa0752910 | Msa0769590 | 0.828249 | 9.984513e-55 | -8.615850e-47 |
| Msa0752910 | Msa0781080 | 0.858893 | 6.025179e-63 | -8.615850e-47 |
| Msa0752910 | Msa0783630 | 0.809720 | 1.645841e-50 | -8.615850e-47 |
| Msa0752910 | Msa0792420 | 0.827540 | 1.478701e-54 | -8.615850e-47 |
| Msa0752910 | Msa0806880 | 0.808942 | 2.417319e-50 | -8.615850e-47 |
| Msa0752910 | Msa0822580 | 0.833425 | 5.371457e-56 | -8.615850e-47 |
| Msa0752910 | Msa0827380 | 0.821507 | 3.891600e-53 | -8.615850e-47 |
| Msa0752910 | Msa0945480 | 0.847826 | 9.043532e-60 | -8.615850e-47 |
| Msa0752910 | Msa1037290 | 0.906919 | 8.867421e-81 | -8.615850e-47 |
| Msa0752910 | Msa1078870 | 0.851607 | 7.949399e-61 | -8.615850e-47 |
| Msa0752910 | Msa1078980 | 0.828647 | 8.003055e-55 | -8.615850e-47 |
| Msa0752910 | Msa1080350 | 0.909728 | 4.129078e-82 | -8.615850e-47 |
| Msa0752910 | Msa1082170 | 0.811546 | 6.632054e-51 | -8.615850e-47 |
| Msa0752910 | Msa1094380 | 0.825653 | 4.167836e-54 | -8.615850e-47 |
| Msa0752910 | Msa1125860 | 0.909089 | 8.374020e-82 | -8.615850e-47 |
| Msa0752910 | Msa1126060 | 0.913246 | 7.684387e-84 | -8.615850e-47 |
| Msa0752910 | Msa1126470 | 0.815813 | 7.627389e-52 | -8.615850e-47 |
| Msa0752910 | Msa1126520 | 0.901150 | 3.582612e-78 | -8.615850e-47 |
| Msa0752910 | Msa1164150 | 0.892784 | 1.153561e-74 | -8.615850e-47 |
| Msa0752910 | Msa1166570 | 0.806450 | 8.176313e-50 | -8.615850e-47 |
| Msa0752910 | Msa1169180 | 0.831292 | 1.813224e-55 | -8.615850e-47 |
| Msa0752910 | Msa1215820 | 0.801696 | 7.972904e-49 | -8.615850e-47 |
| Msa0752910 | Msa1240270 | 0.802437 | 5.613964e-49 | -8.615850e-47 |
| Msa0752910 | Msa1256840 | 0.825078 | 5.703287e-54 | -8.615850e-47 |
| Msa0752910 | Msa1295150 | 0.839292 | 1.728999e-57 | -8.615850e-47 |
| Msa0752910 | Msa1311400 | 0.852610 | 4.124704e-61 | -8.615850e-47 |
| Msa0752910 | Msa1321790 | 0.808461 | 3.062980e-50 | -8.615850e-47 |
| Msa0752910 | Msa1332250 | 0.815151 | 1.070866e-51 | -8.615850e-47 |
| Msa0752910 | Msa1338190 | 0.807400 | 5.149114e-50 | -8.615850e-47 |
| Msa0752910 | Msa1349570 | 0.816448 | 5.501546e-52 | -8.615850e-47 |
| Msa0752910 | Msa1356790 | 0.901814 | 1.830535e-78 | -8.615850e-47 |
| Msa0752910 | Msa1362790 | 0.881786 | 1.796536e-70 | -8.615850e-47 |
| Msa0752910 | Msa1368920 | 0.905070 | 6.328996e-80 | -8.615850e-47 |
| Msa0752910 | Msa1369190 | 0.845889 | 3.063999e-59 | -8.615850e-47 |
| Msa0752910 | Msa1374240 | 0.872112 | 4.083146e-67 | -8.615850e-47 |
| Msa0752910 | Msa1392590 | 0.822058 | 2.902620e-53 | -8.615850e-47 |
| Msa0752910 | Msa1397100 | 0.823767 | 1.160257e-53 | -8.615850e-47 |
| Msa0752910 | Msa1403910 | 0.830179 | 3.398133e-55 | -8.615850e-47 |
| Msa0752910 | Msa1406080 | 0.845198 | 4.717286e-59 | -8.615850e-47 |
| Msa0752910 | Msa1413500 | 0.804812 | 1.804972e-49 | -8.615850e-47 |
| Msa0752910 | Msa1418770 | 0.805564 | 1.256213e-49 | -8.615850e-47 |
| Msa0752910 | Msa1426120 | 0.842475 | 2.528551e-58 | -8.615850e-47 |
| Msa0752910 | Msa1426490 | 0.826413 | 2.750497e-54 | -8.615850e-47 |
| Msa0752910 | Msa1427560 | 0.800046 | 1.731701e-48 | -8.615850e-47 |
| Msa0752910 | Msa1450280 | 0.827176 | 1.808244e-54 | -8.615850e-47 |
| Msa0752910 | Msa1455950 | 0.862655 | 4.344675e-64 | -8.615850e-47 |
| Msa0752910 | Msa1456050 | 0.829240 | 5.749108e-55 | -8.615850e-47 |
| Msa0752910 | Msa1462860 | 0.817084 | 3.961225e-52 | -8.615850e-47 |
| Msa0128750 | Msa0752910 | 0.847842 | 8.950086e-60 | -8.615850e-47 |
| Msa0138890 | Msa0752910 | 0.801537 | 8.591806e-49 | -8.615850e-47 |
| Msa0173530 | Msa0752910 | 0.808298 | 3.317394e-50 | -8.615850e-47 |
| Msa0191450 | Msa0752910 | 0.818648 | 1.756330e-52 | -8.615850e-47 |
| Msa0192750 | Msa0752910 | 0.814935 | 1.195463e-51 | -8.615850e-47 |
| Msa0210360 | Msa0752910 | 0.843358 | 1.472215e-58 | -8.615850e-47 |
| Msa0219120 | Msa0752910 | 0.834216 | 3.406536e-56 | -8.615850e-47 |
| Msa0229150 | Msa0752910 | 0.812943 | 3.287188e-51 | -8.615850e-47 |
| Msa0471880 | Msa0752910 | 0.819535 | 1.103754e-52 | -8.615850e-47 |
| Msa0481520 | Msa0752910 | 0.804929 | 1.706062e-49 | -8.615850e-47 |
| Msa0481850 | Msa0752910 | 0.926892 | 2.506723e-91 | -8.615850e-47 |
| Msa0258850 | Msa0752910 | 0.823425 | 1.394527e-53 | -8.615850e-47 |
| Msa0298200 | Msa0752910 | 0.823995 | 1.025914e-53 | -8.615850e-47 |
| Msa0335840 | Msa0752910 | 0.805193 | 1.501987e-49 | -8.615850e-47 |
| Msa0337670 | Msa0752910 | 0.849186 | 3.799859e-60 | -8.615850e-47 |
| Msa0348830 | Msa0752910 | 0.829368 | 5.354553e-55 | -8.615850e-47 |
| Msa0573350 | Msa0752910 | 0.851900 | 6.563660e-61 | -8.615850e-47 |
| Msa0584030 | Msa0752910 | 0.860441 | 2.061439e-63 | -8.615850e-47 |
| Msa0590940 | Msa0752910 | 0.813259 | 2.802069e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0752910 | MtrunA17_Chr5g0397241 | 100.000 | 180 | 0 | 0 | 31 | 210 | 1 | 180 | 2.16e-130 | 364 |
| Msa0752910 | MtrunA17_Chr8g0387411 | 93.889 | 180 | 8 | 1 | 31 | 210 | 1 | 177 | 1.26e-120 | 339 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0752910 | AT4G25740.1 | 81.935 | 155 | 23 | 1 | 31 | 185 | 1 | 150 | 2.87e-79 | 235 |
| Msa0752910 | AT5G52650.1 | 80.000 | 155 | 30 | 1 | 31 | 185 | 1 | 154 | 1.02e-72 | 218 |
| Msa0752910 | AT5G41520.1 | 75.974 | 154 | 32 | 5 | 31 | 183 | 1 | 150 | 4.78e-70 | 211 |
| Msa0752910 | AT4G25740.2 | 63.277 | 177 | 32 | 1 | 31 | 207 | 1 | 144 | 4.18e-59 | 182 |
| Msa0752910 | AT5G41520.2 | 75.926 | 108 | 22 | 4 | 76 | 183 | 1 | 104 | 1.14e-42 | 140 |
Find 87 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGATAGTTCTTGATTT+TGG | 0.149376 | 5_2:-6597673 | Msa0752910:three_prime_UTR |
| TGCTTCAGCTCATGCAGTTT+TGG | 0.202034 | 5_2:-6597880 | Msa0752910:three_prime_UTR |
| AGAGGACCTGCTGGTGAATT+TGG | 0.215916 | 5_2:-6599472 | Msa0752910:CDS |
| AGATTTGGCACATCGATTTC+TGG | 0.226768 | 5_2:+6599860 | None:intergenic |
| AGCTTAATCACTTGCAGATT+TGG | 0.235590 | 5_2:+6599845 | None:intergenic |
| TGCAAAGAAGGATTTCAATT+TGG | 0.241273 | 5_2:-6599891 | Msa0752910:CDS |
| TTGCTTGGATGAACTATTAC+TGG | 0.272334 | 5_2:-6599781 | Msa0752910:CDS |
| ACCTAAAATCATTTCTGAAT+TGG | 0.279873 | 5_2:-6597591 | Msa0752910:three_prime_UTR |
| GCTGACTACAGGCCTTCTTT+TGG | 0.293788 | 5_2:-6599427 | Msa0752910:CDS |
| CCTGGCTTCGGTCGTGGTTC+TGG | 0.294525 | 5_2:-6597953 | Msa0752910:CDS |
| GGTCGTGGTTCTGGTGGCTT+TGG | 0.306704 | 5_2:-6597944 | Msa0752910:CDS |
| CTCCTTTCTCCATCGAATCT+TGG | 0.343480 | 5_2:+6599532 | None:intergenic |
| AAGCCAGCTGGAAGGCCCTT+TGG | 0.353720 | 5_2:-6599671 | Msa0752910:CDS |
| TTCGATGGAGAAAGGAGATT+TGG | 0.365394 | 5_2:-6599526 | Msa0752910:CDS |
| TGATGCAGAGCTTCAAATCT+AGG | 0.370024 | 5_2:-6599823 | Msa0752910:CDS |
| TACTGGTTCCTTACCAATGA+TGG | 0.373159 | 5_2:-6599764 | Msa0752910:CDS |
| AGGCCCTTTGGTGGTCCTCC+TGG | 0.384336 | 5_2:-6599659 | Msa0752910:CDS |
| CAGGGCCCTGGTGGTAGACC+TGG | 0.396705 | 5_2:-6597971 | Msa0752910:CDS |
| GATTTGGCACATCGATTTCT+GGG | 0.410537 | 5_2:+6599861 | None:intergenic |
| TAAGCATCGTTTGAACTAGT+TGG | 0.424537 | 5_2:+6597917 | None:intergenic |
| GAGAAACTCAATTCCATCAT+TGG | 0.425707 | 5_2:+6599751 | None:intergenic |
| CTGCCTCTACATTGCAATCA+TGG | 0.430480 | 5_2:-6600159 | Msa0752910:intron |
| CCACCAAAGGGCCTTCCAGC+TGG | 0.433378 | 5_2:+6599668 | None:intergenic |
| ATGATGGAATTGAGTTTCTC+AGG | 0.441503 | 5_2:-6599748 | Msa0752910:CDS |
| AATTCACCAGCAGGTCCTCT+TGG | 0.445100 | 5_2:+6599475 | None:intergenic |
| TTTCTGAATTGGAGATGTCT+TGG | 0.448533 | 5_2:-6597580 | Msa0752910:three_prime_UTR |
| TCCTGCTACTTTGAAGAAGC+AGG | 0.450643 | 5_2:-6599696 | Msa0752910:CDS |
| GCCTGCTTCTTCAAAGTAGC+AGG | 0.453311 | 5_2:+6599695 | None:intergenic |
| ATTCACCAGCAGGTCCTCTT+GGG | 0.458492 | 5_2:+6599476 | None:intergenic |
| CTGACTCTATTGCAGGGCCC+TGG | 0.459984 | 5_2:-6597983 | Msa0752910:intron |
| GGGAGTTTGCTATGCAAAGA+AGG | 0.473090 | 5_2:-6599903 | Msa0752910:CDS |
| AAGAAGCAGGCTAAGCCAGC+TGG | 0.479610 | 5_2:-6599683 | Msa0752910:CDS |
| GGTAGACCTGGCTTCGGTCG+TGG | 0.484946 | 5_2:-6597959 | Msa0752910:CDS |
| GGCTTCGGTCGTGGTTCTGG+TGG | 0.490892 | 5_2:-6597950 | Msa0752910:CDS |
| CAGGTCCTCTTGGGCCTCCA+CGG | 0.492606 | 5_2:+6599485 | None:intergenic |
| GACGATAGATCAAGGACTGT+TGG | 0.492741 | 5_2:-6597710 | Msa0752910:three_prime_UTR |
| CTTTCTCCATCGAATCTTGG+TGG | 0.494392 | 5_2:+6599535 | None:intergenic |
| ATCACCAGGAGGACCACCAA+AGG | 0.501155 | 5_2:+6599655 | None:intergenic |
| CCAGCTGGAAGGCCCTTTGG+TGG | 0.502902 | 5_2:-6599668 | Msa0752910:CDS |
| CACCAAGATTCGATGGAGAA+AGG | 0.503103 | 5_2:-6599534 | Msa0752910:CDS |
| GATGGAGAAAGGAGATTTGG+TGG | 0.503144 | 5_2:-6599523 | Msa0752910:CDS |
| GTGGAGCTCCAGCTGACTAC+AGG | 0.506847 | 5_2:-6599438 | Msa0752910:CDS |
| AAGATTATTACCCCAAAAGA+AGG | 0.511567 | 5_2:+6599415 | None:intergenic |
| TTTCTCCATCGAATCTTGGT+GGG | 0.511886 | 5_2:+6599536 | None:intergenic |
| CCTGGTGGTAGACCTGGCTT+CGG | 0.513224 | 5_2:-6597965 | Msa0752910:CDS |
| TCTCCTCCAAATTCACCAGC+AGG | 0.516678 | 5_2:+6599466 | None:intergenic |
| AAAGAAGGCCTGTAGTCAGC+TGG | 0.516901 | 5_2:+6599430 | None:intergenic |
| TCAAACAACTTGTAGTGGAG+GGG | 0.518188 | 5_2:+6597832 | None:intergenic |
| GTCCTCCTGGTGATCGCCCT+AGG | 0.527814 | 5_2:-6599646 | Msa0752910:intron |
| GGACCTGCTGGTGAATTTGG+AGG | 0.530997 | 5_2:-6599469 | Msa0752910:CDS |
| CTACAAGTTGTTTGATCCAT+CGG | 0.533537 | 5_2:-6597824 | Msa0752910:three_prime_UTR |
| CCAGAACCACGACCGAAGCC+AGG | 0.533716 | 5_2:+6597953 | None:intergenic |
| CCGAAGCCAGGTCTACCACC+AGG | 0.539431 | 5_2:+6597965 | None:intergenic |
| AATGTTTGGACGATAGATCA+AGG | 0.541184 | 5_2:-6597718 | Msa0752910:three_prime_UTR |
| ACTCAATTCCATCATTGGTA+AGG | 0.545851 | 5_2:+6599756 | None:intergenic |
| GGAGGCCCAAGAGGACCTGC+TGG | 0.551228 | 5_2:-6599481 | Msa0752910:CDS |
| GGTATTTGCAGATCTCTCTA+CGG | 0.553257 | 5_2:+6600024 | None:intergenic |
| TTTAGAAGATTGCAGCGCGA+AGG | 0.554374 | 5_2:-6600225 | Msa0752910:CDS |
| CACAAGACATACCTTGGAAG+AGG | 0.559210 | 5_2:+6600003 | None:intergenic |
| TTAGAAGATTGCAGCGCGAA+GGG | 0.562488 | 5_2:-6600224 | Msa0752910:CDS |
| GTAGCAGGAACAATCTCAGA+TGG | 0.565512 | 5_2:+6599710 | None:intergenic |
| TCACCAGGAGGACCACCAAA+GGG | 0.567521 | 5_2:+6599656 | None:intergenic |
| ACTCTATTGCAGGGCCCTGG+TGG | 0.567801 | 5_2:-6597980 | Msa0752910:intron |
| ATCAAACAACTTGTAGTGGA+GGG | 0.574464 | 5_2:+6597831 | None:intergenic |
| AGCAGGCTAAGCCAGCTGGA+AGG | 0.574627 | 5_2:-6599679 | Msa0752910:CDS |
| TATTAAAATAAAATGTCCGA+TGG | 0.576095 | 5_2:+6597808 | None:intergenic |
| ATGGATCAAACAACTTGTAG+TGG | 0.585969 | 5_2:+6597827 | None:intergenic |
| AGGGGCCCACCAAGATTCGA+TGG | 0.586074 | 5_2:-6599541 | Msa0752910:CDS |
| AATTACCTAGGGCGATCACC+AGG | 0.586300 | 5_2:+6599641 | None:intergenic |
| GGCCTCCACGGTATCCATCA+CGG | 0.588978 | 5_2:+6599497 | None:intergenic |
| ATCTGCAAATACCTCTTCCA+AGG | 0.590451 | 5_2:-6600014 | Msa0752910:intron |
| GATGCAGAGCTTCAAATCTA+GGG | 0.604467 | 5_2:-6599822 | Msa0752910:CDS |
| CAAACAACTTGTAGTGGAGG+GGG | 0.604922 | 5_2:+6597833 | None:intergenic |
| GATCAAACAACTTGTAGTGG+AGG | 0.605834 | 5_2:+6597830 | None:intergenic |
| TCAAATCTAGGGAATATGTG+AGG | 0.607518 | 5_2:-6599811 | Msa0752910:CDS |
| CAAATCTAGGGAATATGTGA+GGG | 0.609242 | 5_2:-6599810 | Msa0752910:CDS |
| ATACCATGATTGCAATGTAG+AGG | 0.611113 | 5_2:+6600156 | None:intergenic |
| GCAGCGCGAAGGGATTAGAA+AGG | 0.617881 | 5_2:-6600214 | Msa0752910:CDS |
| GGATACCGTGGAGGCCCAAG+AGG | 0.629598 | 5_2:-6599490 | Msa0752910:CDS |
| AGATTTGGTGGTGACCGTGA+TGG | 0.637340 | 5_2:-6599511 | Msa0752910:CDS |
| CAGCACAGCAGAAACTTCAG+CGG | 0.645527 | 5_2:+6600179 | None:intergenic |
| GGTGAATTTGGAGGAGACAA+AGG | 0.655884 | 5_2:-6599460 | Msa0752910:CDS |
| GAATTTGGAGGAGACAAAGG+TGG | 0.658883 | 5_2:-6599457 | Msa0752910:CDS |
| CGAAGCCAGGTCTACCACCA+GGG | 0.679017 | 5_2:+6597966 | None:intergenic |
| GACCGTGATGGATACCGTGG+AGG | 0.697879 | 5_2:-6599499 | Msa0752910:CDS |
| GGTGACCGTGATGGATACCG+TGG | 0.715974 | 5_2:-6599502 | Msa0752910:CDS |
| TACCTAGGGCGATCACCAGG+AGG | 0.726307 | 5_2:+6599644 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATGTTTTGTTATT+TGG | - | chr5_2:6598696-6598715 | Msa0752910:intron | 10.0% |
| !! | AAATAAATATAAAAATTGAG+TGG | - | chr5_2:6599887-6599906 | Msa0752910:CDS | 10.0% |
| !! | AATAAATATAAAAATTGAGT+GGG | - | chr5_2:6599888-6599907 | Msa0752910:CDS | 10.0% |
| !! | AAACAAAAAGTGAATAAAAT+TGG | + | chr5_2:6598217-6598236 | None:intergenic | 15.0% |
| !!! | TTCTAAAATACATATAAACT+TGG | - | chr5_2:6599190-6599209 | Msa0752910:intron | 15.0% |
| !!! | TCTAAAATACATATAAACTT+GGG | - | chr5_2:6599191-6599210 | Msa0752910:intron | 15.0% |
| !!! | TTTGTTTTTGCATATTCAAA+AGG | + | chr5_2:6597669-6597688 | None:intergenic | 20.0% |
| !! | TAAGAAAGAGAAAGTAAATT+AGG | - | chr5_2:6598040-6598059 | Msa0752910:intron | 20.0% |
| !! | AAGAAAGAGAAAGTAAATTA+GGG | - | chr5_2:6598041-6598060 | Msa0752910:intron | 20.0% |
| !! | AATTCCAAATTAATTACCTA+GGG | + | chr5_2:6598662-6598681 | None:intergenic | 20.0% |
| !!! | TTTATGTTTTGTTATTTGGT+CGG | - | chr5_2:6598700-6598719 | Msa0752910:intron | 20.0% |
| !! | TCAAATCAAAGATAATATTG+AGG | + | chr5_2:6599012-6599031 | None:intergenic | 20.0% |
| !! | ACTTATATATATTGAGCAAA+GGG | + | chr5_2:6599230-6599249 | None:intergenic | 20.0% |
| !! | AACTTATATATATTGAGCAA+AGG | + | chr5_2:6599231-6599250 | None:intergenic | 20.0% |
| !!! | TTTAACTAGTTTAATAGAGT+TGG | - | chr5_2:6599384-6599403 | Msa0752910:intron | 20.0% |
| !!! | GATTTAGCTTTTGAAATATA+AGG | - | chr5_2:6599986-6600005 | Msa0752910:intron | 20.0% |
| !! | TATTAAAATAAAATGTCCGA+TGG | + | chr5_2:6600484-6600503 | None:intergenic | 20.0% |
| !!! | ATGATGATTTTGTTAATGTT+TGG | - | chr5_2:6600557-6600576 | Msa0752910:intron | 20.0% |
| !!! | AGAAATGATTTTAGGTTATT+GGG | + | chr5_2:6600694-6600713 | None:intergenic | 20.0% |
| ! | ATGAAGATCTAACAGAAAAT+TGG | - | chr5_2:6597955-6597974 | Msa0752910:CDS | 25.0% |
| ! | TGAAGATCTAACAGAAAATT+GGG | - | chr5_2:6597956-6597975 | Msa0752910:CDS | 25.0% |
| ! | TTTCTCTTTCTTATATACGA+TGG | + | chr5_2:6598033-6598052 | None:intergenic | 25.0% |
| ! | TTATTGTGTTGTGTTTGAAT+TGG | - | chr5_2:6598340-6598359 | Msa0752910:intron | 25.0% |
| !!! | AAACTGTTGTTATTTTTCAG+AGG | - | chr5_2:6598365-6598384 | Msa0752910:intron | 25.0% |
| !!! | AACTGTTGTTATTTTTCAGA+GGG | - | chr5_2:6598366-6598385 | Msa0752910:intron | 25.0% |
| ! | CAATTCCAAATTAATTACCT+AGG | + | chr5_2:6598663-6598682 | None:intergenic | 25.0% |
| !!! | TTTTGGGGTAATAATCTTAT+TGG | - | chr5_2:6598879-6598898 | Msa0752910:intron | 25.0% |
| !!! | ATGTTGTGTTTGTTATGATT+TGG | - | chr5_2:6598930-6598949 | Msa0752910:intron | 25.0% |
| !! | TTGGTCTATTCATTTTGTTA+TGG | - | chr5_2:6598949-6598968 | Msa0752910:intron | 25.0% |
| !!! | TTTTGTTATGGTGTTTTATG+CGG | - | chr5_2:6598961-6598980 | Msa0752910:intron | 25.0% |
| ! | ATTTGTTCAGAAAAAGAAAC+AGG | - | chr5_2:6599580-6599599 | Msa0752910:intron | 25.0% |
| ! | CCAATAGAATTATATACATG+AGG | + | chr5_2:6600258-6600277 | None:intergenic | 25.0% |
| ! | CCTCATGTATATAATTCTAT+TGG | - | chr5_2:6600255-6600274 | Msa0752910:intron | 25.0% |
| !!! | CAATTGATAGTTCTTGATTT+TGG | - | chr5_2:6600616-6600635 | Msa0752910:intron | 25.0% |
| !!! | CAGAAATGATTTTAGGTTAT+TGG | + | chr5_2:6600695-6600714 | None:intergenic | 25.0% |
| ! | ACCTAAAATCATTTCTGAAT+TGG | - | chr5_2:6600698-6600717 | Msa0752910:intron | 25.0% |
| !! | TCCAATTCAGAAATGATTTT+AGG | + | chr5_2:6600702-6600721 | None:intergenic | 25.0% |
| ! | TTATTTTCGGCAATTCAGTT+GGG | - | chr5_2:6597884-6597903 | Msa0752910:three_prime_UTR | 30.0% |
| TAAAATTGGAATCGCGTAAA+TGG | + | chr5_2:6598203-6598222 | None:intergenic | 30.0% | |
| TATGTCTTGTGCAATAATCT+AGG | - | chr5_2:6598298-6598317 | Msa0752910:intron | 30.0% | |
| ATGTCTTGTGCAATAATCTA+GGG | - | chr5_2:6598299-6598318 | Msa0752910:intron | 30.0% | |
| TGCAAAGAAGGATTTCAATT+TGG | - | chr5_2:6598398-6598417 | Msa0752910:intron | 30.0% | |
| AAGATTATTACCCCAAAAGA+AGG | + | chr5_2:6598877-6598896 | None:intergenic | 30.0% | |
| !! | TTTGTTATGGTGTTTTATGC+GGG | - | chr5_2:6598962-6598981 | Msa0752910:intron | 30.0% |
| !! | TGTTTTATGCGGGTTAATTT+TGG | - | chr5_2:6598972-6598991 | Msa0752910:intron | 30.0% |
| ! | TTTAATAGAGTTGGTTCCAA+TGG | - | chr5_2:6599393-6599412 | Msa0752910:intron | 30.0% |
| !! | ATTGTTCTATCCAAGTTGAT+AGG | - | chr5_2:6599419-6599438 | Msa0752910:intron | 30.0% |
| !! | TTGTTCTATCCAAGTTGATA+GGG | - | chr5_2:6599420-6599439 | Msa0752910:intron | 30.0% |
| !! | CAAGCATACTCATTTTTATG+TGG | + | chr5_2:6599559-6599578 | None:intergenic | 30.0% |
| CACATAAAAATGAGTATGCT+TGG | - | chr5_2:6599557-6599576 | Msa0752910:intron | 30.0% | |
| CACTTTACAGTAAGAAAGAA+TGG | - | chr5_2:6599638-6599657 | Msa0752910:intron | 30.0% | |
| GAGATAAGAGTAAGAAAGAA+TGG | - | chr5_2:6599660-6599679 | Msa0752910:CDS | 30.0% | |
| TCTCTTGTATAAAGTAGCAA+AGG | - | chr5_2:6599815-6599834 | Msa0752910:CDS | 30.0% | |
| ATAGTGTATACCAACTTGTA+GGG | + | chr5_2:6600121-6600140 | None:intergenic | 30.0% | |
| CTCTACCTTACTTTGAATTA+TGG | - | chr5_2:6600146-6600165 | Msa0752910:intron | 30.0% | |
| ATGCACCATAATTCAAAGTA+AGG | + | chr5_2:6600154-6600173 | None:intergenic | 30.0% | |
| ATTATATACATGAGGAAAGC+AGG | + | chr5_2:6600250-6600269 | None:intergenic | 30.0% | |
| CAGAAGAATAAAACTTGATC+AGG | + | chr5_2:6600289-6600308 | None:intergenic | 30.0% | |
| ! | TGTAATGAGAATTTTGAACC+TGG | - | chr5_2:6600516-6600535 | Msa0752910:intron | 30.0% |
| !! | AGAGTGTTTTACAAAGCTAA+CGG | - | chr5_2:6600666-6600685 | Msa0752910:intron | 30.0% |
| !! | CGTGTTGGAATTTGTTAGAA+AGG | + | chr5_2:6597635-6597654 | None:intergenic | 35.0% |
| AAGGTTTATTGCTTACGTGT+TGG | + | chr5_2:6597650-6597669 | None:intergenic | 35.0% | |
| !! | AACTAACGCAGGGTTATTTT+CGG | - | chr5_2:6597871-6597890 | Msa0752910:three_prime_UTR | 35.0% |
| !! | GTTATTTTCGGCAATTCAGT+TGG | - | chr5_2:6597883-6597902 | Msa0752910:three_prime_UTR | 35.0% |
| TTTCTATTTGGGCTTACTCA+TGG | + | chr5_2:6597982-6598001 | None:intergenic | 35.0% | |
| ATGAGTAAGCCCAAATAGAA+AGG | - | chr5_2:6597981-6598000 | Msa0752910:intron | 35.0% | |
| ATACCATGATTGCAATGTAG+AGG | + | chr5_2:6598136-6598155 | None:intergenic | 35.0% | |
| ! | GCGTAAATGGATTCAAAGAA+TGG | + | chr5_2:6598190-6598209 | None:intergenic | 35.0% |
| TTATTGCACAAGACATACCT+TGG | + | chr5_2:6598295-6598314 | None:intergenic | 35.0% | |
| AGCTTAATCACTTGCAGATT+TGG | + | chr5_2:6598447-6598466 | None:intergenic | 35.0% | |
| TCAAATCTAGGGAATATGTG+AGG | - | chr5_2:6598478-6598497 | Msa0752910:intron | 35.0% | |
| CAAATCTAGGGAATATGTGA+GGG | - | chr5_2:6598479-6598498 | Msa0752910:intron | 35.0% | |
| TTGCTTGGATGAACTATTAC+TGG | - | chr5_2:6598508-6598527 | Msa0752910:intron | 35.0% | |
| ACTCAATTCCATCATTGGTA+AGG | + | chr5_2:6598536-6598555 | None:intergenic | 35.0% | |
| GAGAAACTCAATTCCATCAT+TGG | + | chr5_2:6598541-6598560 | None:intergenic | 35.0% | |
| ! | ATGATGGAATTGAGTTTCTC+AGG | - | chr5_2:6598541-6598560 | Msa0752910:intron | 35.0% |
| ATCGCCCTAGGTAATTAATT+TGG | - | chr5_2:6598655-6598674 | Msa0752910:intron | 35.0% | |
| TATTTGGTCGGTTGATTGAA+TGG | - | chr5_2:6598712-6598731 | Msa0752910:intron | 35.0% | |
| !!! | TGAATGGAATGTGTTTTGAC+AGG | - | chr5_2:6598728-6598747 | Msa0752910:intron | 35.0% |
| !!! | GAATGGAATGTGTTTTGACA+GGG | - | chr5_2:6598729-6598748 | Msa0752910:intron | 35.0% |
| !!! | AATGGAATGTGTTTTGACAG+GGG | - | chr5_2:6598730-6598749 | Msa0752910:intron | 35.0% |
| GCAATATACACAAGACACAA+GGG | + | chr5_2:6599051-6599070 | None:intergenic | 35.0% | |
| AGCAATATACACAAGACACA+AGG | + | chr5_2:6599052-6599071 | None:intergenic | 35.0% | |
| TATATGCAAAACAAGCGTAG+TGG | - | chr5_2:6599329-6599348 | Msa0752910:intron | 35.0% | |
| TGGATAGAACAATCAACCAT+TGG | + | chr5_2:6599412-6599431 | None:intergenic | 35.0% | |
| !! | ATGTTTTTGTGGGCAGAATT+GGG | + | chr5_2:6599503-6599522 | None:intergenic | 35.0% |
| !! | TATGTTTTTGTGGGCAGAAT+TGG | + | chr5_2:6599504-6599523 | None:intergenic | 35.0% |
| AATTCTGCCCACAAAAACAT+AGG | - | chr5_2:6599503-6599522 | Msa0752910:CDS | 35.0% | |
| ATTCTGCCCACAAAAACATA+GGG | - | chr5_2:6599504-6599523 | Msa0752910:CDS | 35.0% | |
| ATAAATACCCAGATTGAGAG+AGG | - | chr5_2:6599754-6599773 | Msa0752910:CDS | 35.0% | |
| GTACTATTAGCAGTATGTCA+CGG | - | chr5_2:6599944-6599963 | Msa0752910:intron | 35.0% | |
| TACTATTAGCAGTATGTCAC+GGG | - | chr5_2:6599945-6599964 | Msa0752910:intron | 35.0% | |
| TCAAAAGCTAAATCCAGTTG+TGG | + | chr5_2:6599980-6599999 | None:intergenic | 35.0% | |
| AAGGAAATCGAGTCAATATG+AGG | + | chr5_2:6600025-6600044 | None:intergenic | 35.0% | |
| CATAGTGTATACCAACTTGT+AGG | + | chr5_2:6600122-6600141 | None:intergenic | 35.0% | |
| TATTCTTCTGACTCTATTGC+AGG | - | chr5_2:6600299-6600318 | Msa0752910:intron | 35.0% | |
| ATTCTTCTGACTCTATTGCA+GGG | - | chr5_2:6600300-6600319 | Msa0752910:intron | 35.0% | |
| ! | TAAGCATCGTTTGAACTAGT+TGG | + | chr5_2:6600375-6600394 | None:intergenic | 35.0% |
| ! | ATCAAACAACTTGTAGTGGA+GGG | + | chr5_2:6600461-6600480 | None:intergenic | 35.0% |
| ATGGATCAAACAACTTGTAG+TGG | + | chr5_2:6600465-6600484 | None:intergenic | 35.0% | |
| CTACAAGTTGTTTGATCCAT+CGG | - | chr5_2:6600465-6600484 | Msa0752910:intron | 35.0% | |
| TCTACTAAAGCAAAAACACC+AGG | + | chr5_2:6600537-6600556 | None:intergenic | 35.0% | |
| AATGTTTGGACGATAGATCA+AGG | - | chr5_2:6600571-6600590 | Msa0752910:intron | 35.0% | |
| TTTCTGAATTGGAGATGTCT+TGG | - | chr5_2:6600709-6600728 | Msa0752910:intron | 35.0% | |
| ACACCTGCATTAGTTAACTC+AGG | - | chr5_2:6597805-6597824 | Msa0752910:three_prime_UTR | 40.0% | |
| TTGCGTTACTTAACTAACGC+AGG | - | chr5_2:6597860-6597879 | Msa0752910:three_prime_UTR | 40.0% | |
| TGCGTTACTTAACTAACGCA+GGG | - | chr5_2:6597861-6597880 | Msa0752910:three_prime_UTR | 40.0% | |
| GGTATTTGCAGATCTCTCTA+CGG | + | chr5_2:6598268-6598287 | None:intergenic | 40.0% | |
| ATCTGCAAATACCTCTTCCA+AGG | - | chr5_2:6598275-6598294 | Msa0752910:intron | 40.0% | |
| !! | GATTTGGCACATCGATTTCT+GGG | + | chr5_2:6598431-6598450 | None:intergenic | 40.0% |
| !! | AGATTTGGCACATCGATTTC+TGG | + | chr5_2:6598432-6598451 | None:intergenic | 40.0% |
| TGATGCAGAGCTTCAAATCT+AGG | - | chr5_2:6598466-6598485 | Msa0752910:intron | 40.0% | |
| GATGCAGAGCTTCAAATCTA+GGG | - | chr5_2:6598467-6598486 | Msa0752910:intron | 40.0% | |
| ! | ATGTGAGGGAAACTTTTGCT+TGG | - | chr5_2:6598493-6598512 | Msa0752910:intron | 40.0% |
| !! | TACTGGTTCCTTACCAATGA+TGG | - | chr5_2:6598525-6598544 | Msa0752910:intron | 40.0% |
| TTTCTCCATCGAATCTTGGT+GGG | + | chr5_2:6598756-6598775 | None:intergenic | 40.0% | |
| TTCGATGGAGAAAGGAGATT+TGG | - | chr5_2:6598763-6598782 | Msa0752910:intron | 40.0% | |
| ! | TTGATTTGATCTCCACAGTG+TGG | - | chr5_2:6599023-6599042 | Msa0752910:intron | 40.0% |
| !! | AAGTTGATAGGGTTGAGTGT+CGG | - | chr5_2:6599431-6599450 | Msa0752910:CDS | 40.0% |
| !! | GTGATTGGTTTCATCCATCA+TGG | + | chr5_2:6599478-6599497 | None:intergenic | 40.0% |
| AAATTGAGTGGGACATTGCT+TGG | - | chr5_2:6599899-6599918 | Msa0752910:CDS | 40.0% | |
| GACATTGCTTGGATAGACAA+AGG | - | chr5_2:6599910-6599929 | Msa0752910:intron | 40.0% | |
| TCAATATGAGGTGATTCGAG+GGG | + | chr5_2:6600013-6600032 | None:intergenic | 40.0% | |
| GTCAATATGAGGTGATTCGA+GGG | + | chr5_2:6600014-6600033 | None:intergenic | 40.0% | |
| AGTCAATATGAGGTGATTCG+AGG | + | chr5_2:6600015-6600034 | None:intergenic | 40.0% | |
| ! | TCAAACAACTTGTAGTGGAG+GGG | + | chr5_2:6600460-6600479 | None:intergenic | 40.0% |
| GATCAAACAACTTGTAGTGG+AGG | + | chr5_2:6600462-6600481 | None:intergenic | 40.0% | |
| GTGCACATGCTGTGTTGAAT+TGG | - | chr5_2:6597569-6597588 | Msa0752910:three_prime_UTR | 45.0% | |
| GCATTAACACATGCGTGAGT+TGG | + | chr5_2:6597757-6597776 | None:intergenic | 45.0% | |
| CCTGCATTAGTTAACTCAGG+CGG | - | chr5_2:6597808-6597827 | Msa0752910:three_prime_UTR | 45.0% | |
| TAAGCCCAAATAGAAAGGCC+CGG | - | chr5_2:6597986-6598005 | Msa0752910:intron | 45.0% | |
| TTGCCAATAGTTATGCGAGC+CGG | + | chr5_2:6598008-6598027 | None:intergenic | 45.0% | |
| TTTAGAAGATTGCAGCGCGA+AGG | - | chr5_2:6598064-6598083 | Msa0752910:intron | 45.0% | |
| TTAGAAGATTGCAGCGCGAA+GGG | - | chr5_2:6598065-6598084 | Msa0752910:intron | 45.0% | |
| CTGCCTCTACATTGCAATCA+TGG | - | chr5_2:6598130-6598149 | Msa0752910:intron | 45.0% | |
| CACAAGACATACCTTGGAAG+AGG | + | chr5_2:6598289-6598308 | None:intergenic | 45.0% | |
| !! | GGGAGTTTGCTATGCAAAGA+AGG | - | chr5_2:6598386-6598405 | Msa0752910:intron | 45.0% |
| GTAGCAGGAACAATCTCAGA+TGG | + | chr5_2:6598582-6598601 | None:intergenic | 45.0% | |
| !! | TCCTGCTACTTTGAAGAAGC+AGG | - | chr5_2:6598593-6598612 | Msa0752910:intron | 45.0% |
| CTTTCTCCATCGAATCTTGG+TGG | + | chr5_2:6598757-6598776 | None:intergenic | 45.0% | |
| CACCAAGATTCGATGGAGAA+AGG | - | chr5_2:6598755-6598774 | Msa0752910:intron | 45.0% | |
| CTCCTTTCTCCATCGAATCT+TGG | + | chr5_2:6598760-6598779 | None:intergenic | 45.0% | |
| GATGGAGAAAGGAGATTTGG+TGG | - | chr5_2:6598766-6598785 | Msa0752910:intron | 45.0% | |
| GGTGAATTTGGAGGAGACAA+AGG | - | chr5_2:6598829-6598848 | Msa0752910:intron | 45.0% | |
| GAATTTGGAGGAGACAAAGG+TGG | - | chr5_2:6598832-6598851 | Msa0752910:intron | 45.0% | |
| ! | CTGACTACAGGCCTTCTTTT+GGG | - | chr5_2:6598863-6598882 | Msa0752910:intron | 45.0% |
| ! | TGACTACAGGCCTTCTTTTG+GGG | - | chr5_2:6598864-6598883 | Msa0752910:intron | 45.0% |
| GACACTCAACCCTATCAACT+TGG | + | chr5_2:6599432-6599451 | None:intergenic | 45.0% | |
| TCATCCATCATGGCAAGTTC+AGG | + | chr5_2:6599468-6599487 | None:intergenic | 45.0% | |
| ! | TTTTTGTGGGCAGAATTGGG+CGG | + | chr5_2:6599500-6599519 | None:intergenic | 45.0% |
| AATACCCAGATTGAGAGAGG+AGG | - | chr5_2:6599757-6599776 | Msa0752910:CDS | 45.0% | |
| TATTAGCAGTATGTCACGGG+CGG | - | chr5_2:6599948-6599967 | Msa0752910:intron | 45.0% | |
| CAATATGAGGTGATTCGAGG+GGG | + | chr5_2:6600012-6600031 | None:intergenic | 45.0% | |
| ! | TGCTTCAGCTCATGCAGTTT+TGG | - | chr5_2:6600409-6600428 | Msa0752910:intron | 45.0% |
| ! | CAAACAACTTGTAGTGGAGG+GGG | + | chr5_2:6600459-6600478 | None:intergenic | 45.0% |
| GACGATAGATCAAGGACTGT+TGG | - | chr5_2:6600579-6600598 | Msa0752910:intron | 45.0% | |
| !! | ATACTTTAATAATATTAAAA+TGG | + | chr5_2:6599848-6599867 | None:intergenic | 5.0% |
| CTGCATGAGTTAACTCACGC+AGG | + | chr5_2:6597693-6597712 | None:intergenic | 50.0% | |
| CTGCGTGAGTTAACTCATGC+AGG | - | chr5_2:6597691-6597710 | Msa0752910:three_prime_UTR | 50.0% | |
| CCGCCTGAGTTAACTAATGC+AGG | + | chr5_2:6597811-6597830 | None:intergenic | 50.0% | |
| TGGGCGCGAGCAAAATTTGT+TGG | - | chr5_2:6597903-6597922 | Msa0752910:exon | 50.0% | |
| ! | GGGCGCGAGCAAAATTTGTT+GGG | - | chr5_2:6597904-6597923 | Msa0752910:exon | 50.0% |
| TGCCAATAGTTATGCGAGCC+GGG | + | chr5_2:6598007-6598026 | None:intergenic | 50.0% | |
| CAGCACAGCAGAAACTTCAG+CGG | + | chr5_2:6598113-6598132 | None:intergenic | 50.0% | |
| GCCTGCTTCTTCAAAGTAGC+AGG | + | chr5_2:6598597-6598616 | None:intergenic | 50.0% | |
| AATTACCTAGGGCGATCACC+AGG | + | chr5_2:6598651-6598670 | None:intergenic | 50.0% | |
| !! | AGATTTGGTGGTGACCGTGA+TGG | - | chr5_2:6598778-6598797 | Msa0752910:intron | 50.0% |
| ATTCACCAGCAGGTCCTCTT+GGG | + | chr5_2:6598816-6598835 | None:intergenic | 50.0% | |
| AATTCACCAGCAGGTCCTCT+TGG | + | chr5_2:6598817-6598836 | None:intergenic | 50.0% | |
| AGAGGACCTGCTGGTGAATT+TGG | - | chr5_2:6598817-6598836 | Msa0752910:intron | 50.0% | |
| TCTCCTCCAAATTCACCAGC+AGG | + | chr5_2:6598826-6598845 | None:intergenic | 50.0% | |
| AAAGAAGGCCTGTAGTCAGC+TGG | + | chr5_2:6598862-6598881 | None:intergenic | 50.0% | |
| ! | GCTGACTACAGGCCTTCTTT+TGG | - | chr5_2:6598862-6598881 | Msa0752910:intron | 50.0% |
| !! | TGATAGGGTTGAGTGTCGGA+TGG | - | chr5_2:6599435-6599454 | Msa0752910:CDS | 50.0% |
| !! | GATAGGGTTGAGTGTCGGAT+GGG | - | chr5_2:6599436-6599455 | Msa0752910:CDS | 50.0% |
| TGCCCACAAAAACATAGGGC+TGG | - | chr5_2:6599508-6599527 | Msa0752910:CDS | 50.0% | |
| GCCCACAAAAACATAGGGCT+GGG | - | chr5_2:6599509-6599528 | Msa0752910:CDS | 50.0% | |
| !! | GCCCAGCCCTATGTTTTTGT+GGG | + | chr5_2:6599513-6599532 | None:intergenic | 50.0% |
| CACAAAAACATAGGGCTGGG+CGG | - | chr5_2:6599512-6599531 | Msa0752910:CDS | 50.0% | |
| ACAAAAACATAGGGCTGGGC+GGG | - | chr5_2:6599513-6599532 | Msa0752910:CDS | 50.0% | |
| ! | AGAGAGGAGGCGCAAAACAT+TGG | - | chr5_2:6599770-6599789 | Msa0752910:CDS | 50.0% |
| ATTAGCAGTATGTCACGGGC+GGG | - | chr5_2:6599949-6599968 | Msa0752910:intron | 50.0% | |
| !! | GGGTAACGGGTGAAACACAA+AGG | + | chr5_2:6600044-6600063 | None:intergenic | 50.0% |
| ACGAACAACAACCGGTTGCT+CGG | + | chr5_2:6600079-6600098 | None:intergenic | 50.0% | |
| ! | ACCGGTTGTTGTTCGTGTCA+CGG | - | chr5_2:6600083-6600102 | Msa0752910:intron | 50.0% |
| CTGCGTGAGTTAACTCACGC+AGG | + | chr5_2:6597723-6597742 | None:intergenic | 55.0% | |
| CGAGCCGGGCCTTTCTATTT+GGG | + | chr5_2:6597993-6598012 | None:intergenic | 55.0% | |
| GCAGCGCGAAGGGATTAGAA+AGG | - | chr5_2:6598075-6598094 | Msa0752910:intron | 55.0% | |
| AAGAAGCAGGCTAAGCCAGC+TGG | - | chr5_2:6598606-6598625 | Msa0752910:intron | 55.0% | |
| TCACCAGGAGGACCACCAAA+GGG | + | chr5_2:6598636-6598655 | None:intergenic | 55.0% | |
| ATCACCAGGAGGACCACCAA+AGG | + | chr5_2:6598637-6598656 | None:intergenic | 55.0% | |
| GGACCTGCTGGTGAATTTGG+AGG | - | chr5_2:6598820-6598839 | Msa0752910:intron | 55.0% | |
| GACACAAGGGAACCACACTG+TGG | + | chr5_2:6599038-6599057 | None:intergenic | 55.0% | |
| !! | GGTTGAGTGTCGGATGGGTT+CGG | - | chr5_2:6599441-6599460 | Msa0752910:CDS | 55.0% |
| !! | GTTGAGTGTCGGATGGGTTC+GGG | - | chr5_2:6599442-6599461 | Msa0752910:CDS | 55.0% |
| !! | CGCCCAGCCCTATGTTTTTG+TGG | + | chr5_2:6599514-6599533 | None:intergenic | 55.0% |
| TGCGCCTCCTCTCTCAATCT+GGG | + | chr5_2:6599764-6599783 | None:intergenic | 55.0% | |
| TTGCGCCTCCTCTCTCAATC+TGG | + | chr5_2:6599765-6599784 | None:intergenic | 55.0% | |
| GGTCGGATTTCACGGGTAAC+GGG | + | chr5_2:6600057-6600076 | None:intergenic | 55.0% | |
| GGGTCGGATTTCACGGGTAA+CGG | + | chr5_2:6600058-6600077 | None:intergenic | 55.0% | |
| TTGCTCGGGTCGGATTTCAC+GGG | + | chr5_2:6600064-6600083 | None:intergenic | 55.0% | |
| GTTGCTCGGGTCGGATTTCA+CGG | + | chr5_2:6600065-6600084 | None:intergenic | 55.0% | |
| TGAAATCCGACCCGAGCAAC+CGG | - | chr5_2:6600065-6600084 | Msa0752910:intron | 55.0% | |
| CGAACAACAACCGGTTGCTC+GGG | + | chr5_2:6600078-6600097 | None:intergenic | 55.0% | |
| CCCGTGACACGAACAACAAC+CGG | + | chr5_2:6600087-6600106 | None:intergenic | 55.0% | |
| ! | CCGGTTGTTGTTCGTGTCAC+GGG | - | chr5_2:6600084-6600103 | Msa0752910:intron | 55.0% |
| ! | TCGTGTCACGGGTTGTTGCT+CGG | - | chr5_2:6600095-6600114 | Msa0752910:intron | 55.0% |
| TGTTGCTCGGCCCTACAAGT+TGG | - | chr5_2:6600108-6600127 | Msa0752910:intron | 55.0% | |
| GCGAGCCGGGCCTTTCTATT+TGG | + | chr5_2:6597994-6598013 | None:intergenic | 60.0% | |
| ! | GGCCCGGCTCGCATAACTAT+TGG | - | chr5_2:6598002-6598021 | Msa0752910:intron | 60.0% |
| AGCAGGCTAAGCCAGCTGGA+AGG | - | chr5_2:6598610-6598629 | Msa0752910:intron | 60.0% | |
| AAGCCAGCTGGAAGGCCCTT+TGG | - | chr5_2:6598618-6598637 | Msa0752910:intron | 60.0% | |
| TACCTAGGGCGATCACCAGG+AGG | + | chr5_2:6598648-6598667 | None:intergenic | 60.0% | |
| AGGGGCCCACCAAGATTCGA+TGG | - | chr5_2:6598748-6598767 | Msa0752910:intron | 60.0% | |
| !! | GGTGACCGTGATGGATACCG+TGG | - | chr5_2:6598787-6598806 | Msa0752910:intron | 60.0% |
| !! | GACCGTGATGGATACCGTGG+AGG | - | chr5_2:6598790-6598809 | Msa0752910:intron | 60.0% |
| GGCCTCCACGGTATCCATCA+CGG | + | chr5_2:6598795-6598814 | None:intergenic | 60.0% | |
| GTGGAGCTCCAGCTGACTAC+AGG | - | chr5_2:6598851-6598870 | Msa0752910:intron | 60.0% | |
| CGGGCCTGAACTTGCCATGA+TGG | - | chr5_2:6599461-6599480 | Msa0752910:CDS | 60.0% | |
| GGGCAGAATTGGGCGGTGAT+TGG | + | chr5_2:6599493-6599512 | None:intergenic | 60.0% | |
| AAAACATAGGGCTGGGCGGG+TGG | - | chr5_2:6599516-6599535 | Msa0752910:CDS | 60.0% | |
| AAACATAGGGCTGGGCGGGT+GGG | - | chr5_2:6599517-6599536 | Msa0752910:CDS | 60.0% | |
| CAACAACCGGTTGCTCGGGT+CGG | + | chr5_2:6600074-6600093 | None:intergenic | 60.0% | |
| CTGACTCTATTGCAGGGCCC+TGG | - | chr5_2:6600306-6600325 | Msa0752910:intron | 60.0% | |
| ACTCTATTGCAGGGCCCTGG+TGG | - | chr5_2:6600309-6600328 | Msa0752910:intron | 60.0% | |
| CGAAGCCAGGTCTACCACCA+GGG | + | chr5_2:6600326-6600345 | None:intergenic | 60.0% | |
| CCTGGTGGTAGACCTGGCTT+CGG | - | chr5_2:6600324-6600343 | Msa0752910:intron | 60.0% | |
| !! | GGTCGTGGTTCTGGTGGCTT+TGG | - | chr5_2:6600345-6600364 | Msa0752910:intron | 60.0% |
| CCACCAAAGGGCCTTCCAGC+TGG | + | chr5_2:6598624-6598643 | None:intergenic | 65.0% | |
| CCAGCTGGAAGGCCCTTTGG+TGG | - | chr5_2:6598621-6598640 | Msa0752910:intron | 65.0% | |
| ! | AGGCCCTTTGGTGGTCCTCC+TGG | - | chr5_2:6598630-6598649 | Msa0752910:intron | 65.0% |
| GTCCTCCTGGTGATCGCCCT+AGG | - | chr5_2:6598643-6598662 | Msa0752910:intron | 65.0% | |
| GGATACCGTGGAGGCCCAAG+AGG | - | chr5_2:6598799-6598818 | Msa0752910:intron | 65.0% | |
| CAGGTCCTCTTGGGCCTCCA+CGG | + | chr5_2:6598807-6598826 | None:intergenic | 65.0% | |
| CCGAAGCCAGGTCTACCACC+AGG | + | chr5_2:6600327-6600346 | None:intergenic | 65.0% | |
| GGTAGACCTGGCTTCGGTCG+TGG | - | chr5_2:6600330-6600349 | Msa0752910:intron | 65.0% | |
| CCAGAACCACGACCGAAGCC+AGG | + | chr5_2:6600339-6600358 | None:intergenic | 65.0% | |
| CCTGGCTTCGGTCGTGGTTC+TGG | - | chr5_2:6600336-6600355 | Msa0752910:intron | 65.0% | |
| !! | GGCTTCGGTCGTGGTTCTGG+TGG | - | chr5_2:6600339-6600358 | Msa0752910:intron | 65.0% |
| GGAGGCCCAAGAGGACCTGC+TGG | - | chr5_2:6598808-6598827 | Msa0752910:intron | 70.0% | |
| ATAGGGCTGGGCGGGTGGGT+TGG | - | chr5_2:6599521-6599540 | Msa0752910:CDS | 70.0% | |
| ! | TAGGGCTGGGCGGGTGGGTT+GGG | - | chr5_2:6599522-6599541 | Msa0752910:CDS | 70.0% |
| CGGGCGGGTGTGTCCACAAC+TGG | - | chr5_2:6599964-6599983 | Msa0752910:intron | 70.0% | |
| CAGGGCCCTGGTGGTAGACC+TGG | - | chr5_2:6600318-6600337 | Msa0752910:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 6597557 | 6600754 | 6597557 | ID=Msa0752910;Name=Msa0752910 |
| chr5_2 | mRNA | 6597557 | 6600754 | 6597557 | ID=Msa0752910-mRNA-1;Parent=Msa0752910;Name=Msa0752910-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.8|0.66|0.83|0.8|0.66|6|359|210 |
| chr5_2 | exon | 6597557 | 6597990 | 6597557 | ID=Msa0752910-mRNA-1:exon:2828;Parent=Msa0752910-mRNA-1 |
| chr5_2 | exon | 6599426 | 6599561 | 6599426 | ID=Msa0752910-mRNA-1:exon:2827;Parent=Msa0752910-mRNA-1 |
| chr5_2 | exon | 6599647 | 6599926 | 6599647 | ID=Msa0752910-mRNA-1:exon:2826;Parent=Msa0752910-mRNA-1 |
| chr5_2 | exon | 6600015 | 6600063 | 6600015 | ID=Msa0752910-mRNA-1:exon:2825;Parent=Msa0752910-mRNA-1 |
| chr5_2 | exon | 6600160 | 6600249 | 6600160 | ID=Msa0752910-mRNA-1:exon:2824;Parent=Msa0752910-mRNA-1 |
| chr5_2 | exon | 6600752 | 6600754 | 6600752 | ID=Msa0752910-mRNA-1:exon:2823;Parent=Msa0752910-mRNA-1 |
| chr5_2 | CDS | 6600752 | 6600754 | 6600752 | ID=Msa0752910-mRNA-1:cds;Parent=Msa0752910-mRNA-1 |
| chr5_2 | CDS | 6600160 | 6600249 | 6600160 | ID=Msa0752910-mRNA-1:cds;Parent=Msa0752910-mRNA-1 |
| chr5_2 | CDS | 6600015 | 6600063 | 6600015 | ID=Msa0752910-mRNA-1:cds;Parent=Msa0752910-mRNA-1 |
| chr5_2 | CDS | 6599647 | 6599926 | 6599647 | ID=Msa0752910-mRNA-1:cds;Parent=Msa0752910-mRNA-1 |
| chr5_2 | CDS | 6599426 | 6599561 | 6599426 | ID=Msa0752910-mRNA-1:cds;Parent=Msa0752910-mRNA-1 |
| chr5_2 | CDS | 6597916 | 6597990 | 6597916 | ID=Msa0752910-mRNA-1:cds;Parent=Msa0752910-mRNA-1 |
| chr5_2 | three_prime_UTR | 6597557 | 6597915 | 6597557 | ID=Msa0752910-mRNA-1:three_prime_utr;Parent=Msa0752910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
