Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005096.t1 | RHN80631.1 | 95.2 | 964 | 44 | 2 | 1 | 964 | 33 | 994 | 0.00E+00 | 1657.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005096.t1 | Q9NW13 | 32.5 | 954 | 434 | 17 | 23 | 964 | 4 | 759 | 6.6e-54 | 214.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005096.t1 | G7I6T9 | 95.2 | 964 | 44 | 2 | 1 | 964 | 1 | 962 | 0.0e+00 | 1657.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005096.t1 | MTR_1g080390 | 98.133 | 964 | 16 | 2 | 1 | 964 | 1 | 962 | 0.0 | 1933 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005096.t1 | AT2G21440 | 47.410 | 1023 | 416 | 20 | 24 | 964 | 21 | 1003 | 0.0 | 805 |
| MS.gene005096.t1 | AT1G54080 | 27.103 | 214 | 127 | 5 | 199 | 400 | 64 | 260 | 5.98e-11 | 66.2 |
Find 203 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTCCTTTGGTTCTTT+TGG | 0.108090 | 1.4:+65369791 | None:intergenic |
| TCTGTTTCCTTGGAAGTTTC+AGG | 0.151548 | 1.4:+65365143 | None:intergenic |
| TGCTTCTGGGATGGGTATTT+TGG | 0.157301 | 1.4:-65364839 | MS.gene005096:CDS |
| CGTTACGAAGTTTCAATTTC+TGG | 0.157364 | 1.4:+65363629 | None:intergenic |
| TTAACAGTTTCCTTGGATTT+TGG | 0.171316 | 1.4:+65365221 | None:intergenic |
| ACTGAATCTTTGTTCTTCTT+TGG | 0.190926 | 1.4:+65363142 | None:intergenic |
| GGGGTCCCCTTTCTGTCTTT+TGG | 0.224958 | 1.4:+65363396 | None:intergenic |
| TCAACTGCCAATACTGCTTC+TGG | 0.228699 | 1.4:-65364853 | MS.gene005096:CDS |
| AAGAAAGAAGACGCAGTATT+TGG | 0.233382 | 1.4:-65363220 | MS.gene005096:CDS |
| GTAATTTAGCACCATGATTC+TGG | 0.234712 | 1.4:+65363290 | None:intergenic |
| GGTAAGGGGTAGACCATTAA+AGG | 0.238442 | 1.4:-65364818 | MS.gene005096:CDS |
| GTTGCTAGAACTGTTATATT+TGG | 0.244405 | 1.4:-65369367 | MS.gene005096:CDS |
| AGAGCCTTTAAAACCTTTAA+TGG | 0.253378 | 1.4:+65364805 | None:intergenic |
| GATAAAGACAGCGGATTATC+TGG | 0.273260 | 1.4:-65369836 | MS.gene005096:CDS |
| AGGCCAAAGAAAATGAAATA+AGG | 0.273524 | 1.4:-65367746 | MS.gene005096:CDS |
| AAACTCAATGGATCGAAGTT+TGG | 0.305477 | 1.4:-65367405 | MS.gene005096:CDS |
| TTTCATCTGCGGGGACTGTA+TGG | 0.307723 | 1.4:-65367716 | MS.gene005096:CDS |
| CACTTCGGTATTTGTACTCT+TGG | 0.308629 | 1.4:+65363375 | None:intergenic |
| TCCACAATTGGCCGATGTTC+AGG | 0.314138 | 1.4:+65363670 | None:intergenic |
| TTCCTTTCCGAAGAAGCTTT+TGG | 0.331812 | 1.4:+65363334 | None:intergenic |
| TAACCAACCTGCCGAATTAC+AGG | 0.333219 | 1.4:+65364164 | None:intergenic |
| TCTACACAACATCGTGGTTT+TGG | 0.333522 | 1.4:-65370984 | MS.gene005096:CDS |
| ACTTCGGTATTTGTACTCTT+GGG | 0.335882 | 1.4:+65363376 | None:intergenic |
| ATAGTTCCATTGACAGTAAT+AGG | 0.336958 | 1.4:-65363255 | MS.gene005096:CDS |
| CACCATGATTCTGGCCATCT+TGG | 0.340703 | 1.4:+65363299 | None:intergenic |
| CAATCGCAACCTTCTTCCTT+TGG | 0.342154 | 1.4:+65369782 | None:intergenic |
| TGTCAGAAACCTTCCTTTCA+AGG | 0.342388 | 1.4:-65367851 | MS.gene005096:intron |
| TTTCATAACAAAATTATGAT+TGG | 0.345149 | 1.4:+65362996 | None:intergenic |
| CAAATCAACTTCTGTTTCCT+TGG | 0.354494 | 1.4:+65365133 | None:intergenic |
| GTCGTCTCATAGCTGTTGAT+TGG | 0.358840 | 1.4:-65367380 | MS.gene005096:CDS |
| AACTCAATGGATCGAAGTTT+GGG | 0.358983 | 1.4:-65367404 | MS.gene005096:CDS |
| GTTATTTACAGATTCGTCTT+TGG | 0.369847 | 1.4:+65365274 | None:intergenic |
| AAGCAGGGGAAAAGGTTTCT+AGG | 0.374787 | 1.4:-65363171 | MS.gene005096:CDS |
| TGCACCCTTAACAGTTTCCT+TGG | 0.378021 | 1.4:+65365214 | None:intergenic |
| CTGTTTCATGGTTACACAAA+AGG | 0.379270 | 1.4:-65371084 | MS.gene005096:CDS |
| GACAGTAATAGGAAAATATC+AGG | 0.382523 | 1.4:-65363244 | MS.gene005096:CDS |
| CTATTAAGCATCCCCTTTCA+AGG | 0.383007 | 1.4:-65369276 | MS.gene005096:CDS |
| ACCATGAAACAGCGTCTAAC+AGG | 0.384092 | 1.4:+65371095 | None:intergenic |
| GCTGAAACCCCTTCGGCAGC+TGG | 0.384100 | 1.4:+65364584 | None:intergenic |
| AGAACCCTTGTGTGAGAACT+TGG | 0.390972 | 1.4:+65363069 | None:intergenic |
| CTCTGAAGCAGGAGCATCAT+TGG | 0.391724 | 1.4:+65367326 | None:intergenic |
| AAAATCCAAGGAAACTGTTA+AGG | 0.392787 | 1.4:-65365219 | MS.gene005096:CDS |
| TGAGAGTTAGTGAAGGAATA+TGG | 0.394905 | 1.4:+65371240 | None:intergenic |
| AAAGGCTCTGGACAAGAAAT+CGG | 0.400061 | 1.4:-65364791 | MS.gene005096:CDS |
| CCGTGTTCACTATTTGAATC+TGG | 0.400337 | 1.4:+65363460 | None:intergenic |
| GCTAGAACTGTTATATTTGG+TGG | 0.404207 | 1.4:-65369364 | MS.gene005096:CDS |
| ACCTGTTAGACGCTGTTTCA+TGG | 0.405122 | 1.4:-65371096 | MS.gene005096:CDS |
| CACCGCCAAGCCAGAGAAAT+CGG | 0.405483 | 1.4:-65369310 | MS.gene005096:CDS |
| ATCTAATTCAAAGGGAAGAT+TGG | 0.406524 | 1.4:+65365091 | None:intergenic |
| GAACAAACTTTCAGTGAAGT+TGG | 0.409004 | 1.4:-65371119 | MS.gene005096:CDS |
| AAGCTTCCATTTCTGAGTCT+TGG | 0.414414 | 1.4:+65367876 | None:intergenic |
| AGACCACCGCAATCTTTACT+TGG | 0.416144 | 1.4:-65364728 | MS.gene005096:CDS |
| TCCTGTGTGCAGTCTTTCAA+AGG | 0.416759 | 1.4:-65367573 | MS.gene005096:intron |
| AAACCGTTGCTTCACTTCTT+CGG | 0.420518 | 1.4:+65365067 | None:intergenic |
| TTAGAAACAAAGAGTGTTAA+CGG | 0.425518 | 1.4:+65371267 | None:intergenic |
| TGCGTAAACTCCCGCATTGT+CGG | 0.425962 | 1.4:+65363543 | None:intergenic |
| AATCTAAACAACTTAGGAAA+TGG | 0.431039 | 1.4:-65363021 | MS.gene005096:CDS |
| GGCCAAAGAAAATGAAATAA+GGG | 0.433746 | 1.4:-65367745 | MS.gene005096:CDS |
| AGAAAGTCCAAAAGCTTCTT+CGG | 0.435552 | 1.4:-65363341 | MS.gene005096:CDS |
| CCAAGCAAATACCTGTAATT+CGG | 0.436673 | 1.4:-65364175 | MS.gene005096:CDS |
| TTGGTCACTTGGTGGAGAAC+AGG | 0.437156 | 1.4:+65365014 | None:intergenic |
| TGAACCATTCTTCAGCTCAA+TGG | 0.445046 | 1.4:+65370112 | None:intergenic |
| CTGAAGATCATTCCTTGAAA+GGG | 0.446240 | 1.4:+65369264 | None:intergenic |
| ACACACAGTGCCGATTTCTC+TGG | 0.447857 | 1.4:+65369300 | None:intergenic |
| TGCCGATTTCTCTGGCTTGG+CGG | 0.449281 | 1.4:+65369308 | None:intergenic |
| CAACTGCCAATACTGCTTCT+GGG | 0.451408 | 1.4:-65364852 | MS.gene005096:CDS |
| AGAGTTCTTAACAATAATCC+TGG | 0.454597 | 1.4:-65363934 | MS.gene005096:intron |
| CCTGTGTGCAGTCTTTCAAA+GGG | 0.458416 | 1.4:-65367572 | MS.gene005096:intron |
| GGCTTGGCGGTGAACATCTT+CGG | 0.460580 | 1.4:+65369321 | None:intergenic |
| CTAGGACATACTTGGTCACT+TGG | 0.461965 | 1.4:+65365003 | None:intergenic |
| GCGTAAACTCCCGCATTGTC+GGG | 0.462564 | 1.4:+65363544 | None:intergenic |
| GCCAATACTGCTTCTGGGAT+GGG | 0.465705 | 1.4:-65364847 | MS.gene005096:CDS |
| TCAAGAGCAAACTCCACAAT+TGG | 0.466178 | 1.4:+65363658 | None:intergenic |
| TAACGGCGGACATTGTTTAA+CGG | 0.467270 | 1.4:+65371284 | None:intergenic |
| AGCATCAACCAACCTTGATC+CGG | 0.467750 | 1.4:+65370017 | None:intergenic |
| ATCGGCTCATGACAAGGAAC+AGG | 0.468605 | 1.4:-65364773 | MS.gene005096:CDS |
| ACCCATCCCAGAAGCAGTAT+TGG | 0.471074 | 1.4:+65364846 | None:intergenic |
| TTTGGGCACGCCAACTTGGT+GGG | 0.473129 | 1.4:-65368592 | MS.gene005096:CDS |
| ACTGTTTGGGCACGCCAACT+TGG | 0.473827 | 1.4:-65368596 | MS.gene005096:CDS |
| CATTCTTCAGCTCAATGGCT+TGG | 0.474934 | 1.4:+65370117 | None:intergenic |
| CCAAGAACAAGCAGGGGAAA+AGG | 0.475052 | 1.4:-65363179 | MS.gene005096:CDS |
| TGAGCTGAAGAATGGTTCAT+TGG | 0.476836 | 1.4:-65370108 | MS.gene005096:CDS |
| TAGGAGGGACTTATTCTTGA+CGG | 0.477564 | 1.4:-65364611 | MS.gene005096:CDS |
| CAGGCGATTCGAAAACTCAA+TGG | 0.479592 | 1.4:-65367417 | MS.gene005096:CDS |
| TGCAGGCGTCCACGAGGGAC+TGG | 0.480915 | 1.4:-65364919 | MS.gene005096:intron |
| GGCAAATCCAAAAGACAGAA+AGG | 0.484725 | 1.4:-65363403 | MS.gene005096:CDS |
| TACAGATTCGTCTTTGGCAG+AGG | 0.486047 | 1.4:+65365280 | None:intergenic |
| TGCCAATACTGCTTCTGGGA+TGG | 0.486395 | 1.4:-65364848 | MS.gene005096:CDS |
| GTTTGGGCACGCCAACTTGG+TGG | 0.487001 | 1.4:-65368593 | MS.gene005096:CDS |
| CGAAGATCGAAACCGGATCA+AGG | 0.488053 | 1.4:-65370029 | MS.gene005096:intron |
| CAGTGCCGATTTCTCTGGCT+TGG | 0.490360 | 1.4:+65369305 | None:intergenic |
| AATGATAAACCCGACAATGC+GGG | 0.495453 | 1.4:-65363553 | MS.gene005096:CDS |
| GATTTCTTTAGGACAACAAA+AGG | 0.498067 | 1.4:-65365480 | MS.gene005096:intron |
| ATGGTTCATTGGTTGGTGAC+CGG | 0.499594 | 1.4:-65370097 | MS.gene005096:CDS |
| TCGTCTCATAGCTGTTGATT+GGG | 0.499678 | 1.4:-65367379 | MS.gene005096:CDS |
| TGTTTCATGGTTACACAAAA+GGG | 0.499866 | 1.4:-65371083 | MS.gene005096:intron |
| TCATTGACCACAGAAACCTT+TGG | 0.500631 | 1.4:-65363694 | MS.gene005096:intron |
| TTCTCACACAAGGGTTCTCA+AGG | 0.501028 | 1.4:-65363064 | MS.gene005096:CDS |
| AGGGAGCCAAGACTCAGAAA+TGG | 0.503890 | 1.4:-65367882 | MS.gene005096:CDS |
| AGAAATATCTGAAACCTTGT+CGG | 0.504739 | 1.4:+65365169 | None:intergenic |
| GCAAATCCAAAAGACAGAAA+GGG | 0.507205 | 1.4:-65363402 | MS.gene005096:CDS |
| TGAAAATCGAAGATCGAAAC+CGG | 0.507609 | 1.4:-65370036 | MS.gene005096:CDS |
| GGGAAAAGGTTTCTAGGAAA+AGG | 0.509364 | 1.4:-65363165 | MS.gene005096:CDS |
| CCGAATTACAGGTATTTGCT+TGG | 0.511846 | 1.4:+65364175 | None:intergenic |
| TCTTCGGTATCTAATTCAAA+GGG | 0.513395 | 1.4:+65365083 | None:intergenic |
| ATATTCCTTCACTAACTCTC+AGG | 0.514919 | 1.4:-65371238 | MS.gene005096:intron |
| GCTGAAGATCATTCCTTGAA+AGG | 0.515929 | 1.4:+65369263 | None:intergenic |
| CACGGTGGTAGAGTGCCAAA+TGG | 0.516262 | 1.4:-65363442 | MS.gene005096:CDS |
| TCAACAGATCGAACCTTGAA+AGG | 0.517773 | 1.4:+65367838 | None:intergenic |
| TTCATCTGCGGGGACTGTAT+GGG | 0.521165 | 1.4:-65367715 | MS.gene005096:CDS |
| AAGACGCAGTATTTGGAAAG+AGG | 0.521867 | 1.4:-65363213 | MS.gene005096:CDS |
| ATCAGTGGCTGAAACCCCTT+CGG | 0.522666 | 1.4:+65364577 | None:intergenic |
| TTCTTCGGTATCTAATTCAA+AGG | 0.523243 | 1.4:+65365082 | None:intergenic |
| GACGGAACTCCAGCTGCCGA+AGG | 0.523716 | 1.4:-65364593 | MS.gene005096:CDS |
| CAATGATGCTCCTGCTTCAG+AGG | 0.523848 | 1.4:-65367325 | MS.gene005096:CDS |
| CAGATCGAACCTTGAAAGGA+AGG | 0.524767 | 1.4:+65367842 | None:intergenic |
| GAAATATTTATAGTTTGGAA+AGG | 0.525585 | 1.4:-65364331 | MS.gene005096:intron |
| CAAGCCATTGAGCTGAAGAA+TGG | 0.526625 | 1.4:-65370116 | MS.gene005096:CDS |
| GAACAAAGATTCAGTAGGGA+AGG | 0.527716 | 1.4:-65363134 | MS.gene005096:CDS |
| AACCAAGATGGCCAGAATCA+TGG | 0.528146 | 1.4:-65363301 | MS.gene005096:CDS |
| TCCTGAACATCGGCCAATTG+TGG | 0.528514 | 1.4:-65363671 | MS.gene005096:CDS |
| AAATCCAAGGAAACTGTTAA+GGG | 0.531440 | 1.4:-65365218 | MS.gene005096:CDS |
| CTTCGGTATTTGTACTCTTG+GGG | 0.533027 | 1.4:+65363377 | None:intergenic |
| CCAAAAGAACCAAAGGAAGA+AGG | 0.533227 | 1.4:-65369791 | MS.gene005096:intron |
| AAGAAGAACAAAGATTCAGT+AGG | 0.534680 | 1.4:-65363139 | MS.gene005096:CDS |
| GATGCAATAGAGGGCAATGA+AGG | 0.535517 | 1.4:-65369884 | MS.gene005096:intron |
| AAATTACCTTCCTCTGAAGC+AGG | 0.535871 | 1.4:+65367315 | None:intergenic |
| TGCATTATCAGCTGCTTCCG+CGG | 0.535875 | 1.4:+65364879 | None:intergenic |
| ATGCATAACCAAGAACAAGC+AGG | 0.537887 | 1.4:-65363187 | MS.gene005096:CDS |
| TTCCCAGGTCTGCTGCAAGA+AGG | 0.538150 | 1.4:-65368713 | MS.gene005096:intron |
| GCAAATACCTGTAATTCGGC+AGG | 0.538494 | 1.4:-65364171 | MS.gene005096:intron |
| TTCTAAGCCTGAAACTTCCA+AGG | 0.542108 | 1.4:-65365150 | MS.gene005096:CDS |
| GATGCTCCTGCTTCAGAGGA+AGG | 0.546927 | 1.4:-65367321 | MS.gene005096:intron |
| ACTGACAAAGAATCTGATCA+AGG | 0.547224 | 1.4:-65365410 | MS.gene005096:CDS |
| TGGCCGATGTTCAGGACCAA+AGG | 0.547311 | 1.4:+65363678 | None:intergenic |
| GGACATACTTGGTCACTTGG+TGG | 0.548184 | 1.4:+65365006 | None:intergenic |
| AAAGAACAAGCCAAAATCCA+AGG | 0.552898 | 1.4:-65365231 | MS.gene005096:CDS |
| ACGGAACTCCAGCTGCCGAA+GGG | 0.553197 | 1.4:-65364592 | MS.gene005096:CDS |
| CAATGTTGCAACAGAAGCAC+GGG | 0.556088 | 1.4:+65368643 | None:intergenic |
| TTGGGCACGCCAACTTGGTG+GGG | 0.556141 | 1.4:-65368591 | MS.gene005096:CDS |
| TGGTCTCGTGAATTCTGCTA+TGG | 0.558745 | 1.4:-65369344 | MS.gene005096:CDS |
| GGCACGCCAACTTGGTGGGG+AGG | 0.559247 | 1.4:-65368588 | MS.gene005096:intron |
| CATGGTGCTAAATTACATGA+AGG | 0.559370 | 1.4:-65363283 | MS.gene005096:CDS |
| TTCAGTTCCAAAAGAACCAA+AGG | 0.560178 | 1.4:-65369798 | MS.gene005096:CDS |
| CTGAAGAATGGTTCATTGGT+TGG | 0.562960 | 1.4:-65370104 | MS.gene005096:CDS |
| ATTCAAGAAAAGCGACTCCA+CGG | 0.563574 | 1.4:+65363989 | None:intergenic |
| CAAGAAATCGGCTCATGACA+AGG | 0.564214 | 1.4:-65364779 | MS.gene005096:CDS |
| ACTTTACCTCCCCACCAAGT+TGG | 0.564510 | 1.4:+65368582 | None:intergenic |
| TTGTAATGACACAGCAGATG+AGG | 0.565429 | 1.4:-65369609 | MS.gene005096:CDS |
| GTCCAAAAGCTTCTTCGGAA+AGG | 0.566021 | 1.4:-65363336 | MS.gene005096:CDS |
| AGAAGAACAAAGATTCAGTA+GGG | 0.570029 | 1.4:-65363138 | MS.gene005096:CDS |
| CAAATCCAAAAGACAGAAAG+GGG | 0.571325 | 1.4:-65363401 | MS.gene005096:CDS |
| GAAAGATGGCAGGAAAGGAA+AGG | 0.571880 | 1.4:-65364034 | MS.gene005096:CDS |
| TGCATAACCAAGAACAAGCA+GGG | 0.575155 | 1.4:-65363186 | MS.gene005096:CDS |
| TGTAATGACACAGCAGATGA+GGG | 0.575965 | 1.4:-65369608 | MS.gene005096:CDS |
| TGACAAACCAGCAAAAGACT+TGG | 0.576336 | 1.4:-65363485 | MS.gene005096:CDS |
| GCAATGTTGCAACAGAAGCA+CGG | 0.579403 | 1.4:+65368642 | None:intergenic |
| TTCTTTCGATGAGATCACTT+CGG | 0.585525 | 1.4:+65363360 | None:intergenic |
| CCGCAATCTTTACTTGGCGA+AGG | 0.588434 | 1.4:-65364722 | MS.gene005096:intron |
| ATGAAGGAAAATAGCGATGA+CGG | 0.589596 | 1.4:-65371309 | MS.gene005096:CDS |
| CGGAACTCCAGCTGCCGAAG+GGG | 0.589924 | 1.4:-65364591 | MS.gene005096:CDS |
| AAAGCTACAGTATCAGCAGC+GGG | 0.590881 | 1.4:-65363605 | MS.gene005096:CDS |
| TTCAAGAAAAGCGACTCCAC+GGG | 0.595349 | 1.4:+65363990 | None:intergenic |
| TTGTCAAAATCATCGTCAGA+AGG | 0.599134 | 1.4:+65365347 | None:intergenic |
| CAAAAGGTGACAGATGAAGA+TGG | 0.601633 | 1.4:-65365464 | MS.gene005096:CDS |
| TACCCTGTGTCGGACTTCTG+TGG | 0.606080 | 1.4:+65367681 | None:intergenic |
| TAATGACACAGCAGATGAGG+GGG | 0.608560 | 1.4:-65369606 | MS.gene005096:CDS |
| ATTCCACAGAAGTCCGACAC+AGG | 0.608649 | 1.4:-65367684 | MS.gene005096:CDS |
| AGGAATGATCTTCAGCAGCA+TGG | 0.610357 | 1.4:-65369256 | MS.gene005096:intron |
| AAGGAATATATACCCTGTGT+CGG | 0.616888 | 1.4:+65367671 | None:intergenic |
| AAGGGTTCTCAAGGAAATGA+CGG | 0.619296 | 1.4:-65363055 | MS.gene005096:CDS |
| CAGCAGCGGGCTCCTCACAA+TGG | 0.623421 | 1.4:-65363592 | MS.gene005096:CDS |
| TAGATCCAAGTTCTCACACA+AGG | 0.623451 | 1.4:-65363074 | MS.gene005096:CDS |
| TTTCTGCTGTTGCCATTGTG+AGG | 0.623452 | 1.4:+65363580 | None:intergenic |
| GAGTACCTGAGAGTTAGTGA+AGG | 0.624188 | 1.4:+65371233 | None:intergenic |
| TGAAGATCATTCCTTGAAAG+GGG | 0.624383 | 1.4:+65369265 | None:intergenic |
| ATCTGCGGGGACTGTATGGG+AGG | 0.628989 | 1.4:-65367712 | MS.gene005096:CDS |
| AAATGATAAACCCGACAATG+CGG | 0.629902 | 1.4:-65363554 | MS.gene005096:CDS |
| CCAAATGGAAAATCTCCTCA+AGG | 0.629918 | 1.4:-65363427 | MS.gene005096:CDS |
| CCAGATTCAAATAGTGAACA+CGG | 0.633933 | 1.4:-65363460 | MS.gene005096:CDS |
| AAACCTTTGGTCCTGAACAT+CGG | 0.642171 | 1.4:-65363681 | MS.gene005096:CDS |
| GTAATGACACAGCAGATGAG+GGG | 0.644262 | 1.4:-65369607 | MS.gene005096:CDS |
| CAAGAACAGCAGTATTCCCG+TGG | 0.650331 | 1.4:-65364006 | MS.gene005096:CDS |
| AGATGGTAGTACTACTACTG+AGG | 0.654593 | 1.4:-65365447 | MS.gene005096:CDS |
| ATACCGAAGAAGTGAAGCAA+CGG | 0.656518 | 1.4:-65365070 | MS.gene005096:CDS |
| AATGCGGGAGTTTACGCACA+TGG | 0.658005 | 1.4:-65363538 | MS.gene005096:CDS |
| TAGTGATATTGATAGTGTTG+TGG | 0.658825 | 1.4:-65365381 | MS.gene005096:CDS |
| CTCAATGCAGGCGTCCACGA+GGG | 0.661595 | 1.4:-65364924 | MS.gene005096:intron |
| TGATATTGATAGTGTTGTGG+AGG | 0.663472 | 1.4:-65365378 | MS.gene005096:CDS |
| TTCCACAGAAGTCCGACACA+GGG | 0.667711 | 1.4:-65367683 | MS.gene005096:intron |
| TTAAGAAAACCAGTCCCTCG+TGG | 0.669577 | 1.4:+65364910 | None:intergenic |
| GCATAACCAAGAACAAGCAG+GGG | 0.676330 | 1.4:-65363185 | MS.gene005096:CDS |
| AACATCTAAAGAGTCCGACA+AGG | 0.679032 | 1.4:-65365183 | MS.gene005096:CDS |
| ACTCAATGCAGGCGTCCACG+AGG | 0.680693 | 1.4:-65364925 | MS.gene005096:intron |
| AAAAGCTACAGTATCAGCAG+CGG | 0.686433 | 1.4:-65363606 | MS.gene005096:CDS |
| AGATCCAAGTTCTCACACAA+GGG | 0.701976 | 1.4:-65363073 | MS.gene005096:CDS |
| TCGCCAAGTAAAGATTGCGG+TGG | 0.704028 | 1.4:+65364725 | None:intergenic |
| TCAGGGTCTACACAACATCG+TGG | 0.720317 | 1.4:-65370990 | MS.gene005096:intron |
| AATGGAAAATCTCCTCAAGG+AGG | 0.725686 | 1.4:-65363424 | MS.gene005096:CDS |
| AATGACACAGCAGATGAGGG+GGG | 0.726717 | 1.4:-65369605 | MS.gene005096:CDS |
| CCTTCGCCAAGTAAAGATTG+CGG | 0.731180 | 1.4:+65364722 | None:intergenic |
| GAAACAAAGAGTGTTAACGG+CGG | 0.786080 | 1.4:+65371270 | None:intergenic |
| GATTCAAATAGTGAACACGG+TGG | 0.855909 | 1.4:-65363457 | MS.gene005096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 65363009 | 65371352 | 65363009 | ID=MS.gene005096 |
| chr1.4 | mRNA | 65363009 | 65371352 | 65363009 | ID=MS.gene005096.t1;Parent=MS.gene005096 |
| chr1.4 | exon | 65371239 | 65371352 | 65371239 | ID=MS.gene005096.t1.exon1;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65371239 | 65371352 | 65371239 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65371084 | 65371144 | 65371084 | ID=MS.gene005096.t1.exon2;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65371084 | 65371144 | 65371084 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65370972 | 65371008 | 65370972 | ID=MS.gene005096.t1.exon3;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65370972 | 65371008 | 65370972 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65370030 | 65370160 | 65370030 | ID=MS.gene005096.t1.exon4;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65370030 | 65370160 | 65370030 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65369792 | 65369896 | 65369792 | ID=MS.gene005096.t1.exon5;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65369792 | 65369896 | 65369792 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65369587 | 65369695 | 65369587 | ID=MS.gene005096.t1.exon6;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65369587 | 65369695 | 65369587 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65369257 | 65369390 | 65369257 | ID=MS.gene005096.t1.exon7;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65369257 | 65369390 | 65369257 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65368589 | 65368728 | 65368589 | ID=MS.gene005096.t1.exon8;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65368589 | 65368728 | 65368589 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65367852 | 65367902 | 65367852 | ID=MS.gene005096.t1.exon9;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65367852 | 65367902 | 65367852 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65367684 | 65367766 | 65367684 | ID=MS.gene005096.t1.exon10;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65367684 | 65367766 | 65367684 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65367529 | 65367583 | 65367529 | ID=MS.gene005096.t1.exon11;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65367529 | 65367583 | 65367529 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65367322 | 65367436 | 65367322 | ID=MS.gene005096.t1.exon12;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65367322 | 65367436 | 65367322 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65365014 | 65365491 | 65365014 | ID=MS.gene005096.t1.exon13;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65365014 | 65365491 | 65365014 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65364723 | 65364936 | 65364723 | ID=MS.gene005096.t1.exon14;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65364723 | 65364936 | 65364723 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65364560 | 65364630 | 65364560 | ID=MS.gene005096.t1.exon15;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65364560 | 65364630 | 65364560 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65364172 | 65364340 | 65364172 | ID=MS.gene005096.t1.exon16;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65364172 | 65364340 | 65364172 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65363935 | 65364067 | 65363935 | ID=MS.gene005096.t1.exon17;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65363935 | 65364067 | 65363935 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| chr1.4 | exon | 65363009 | 65363703 | 65363009 | ID=MS.gene005096.t1.exon18;Parent=MS.gene005096.t1 |
| chr1.4 | CDS | 65363009 | 65363703 | 65363009 | ID=cds.MS.gene005096.t1;Parent=MS.gene005096.t1 |
| Gene Sequence |
| Protein sequence |
