Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82489.t1 | XP_003612449.1 | 98.5 | 406 | 6 | 0 | 2 | 407 | 3 | 408 | 6.10E-218 | 766.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82489.t1 | Q9XF97 | 84.2 | 406 | 64 | 0 | 2 | 407 | 3 | 408 | 2.6e-193 | 676.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82489.t1 | B7FHR0 | 98.5 | 406 | 6 | 0 | 2 | 407 | 3 | 408 | 4.4e-218 | 766.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050134 | MS.gene82489 | 0.834512 | 2.87E-56 | -1.69E-46 |
| MS.gene052664 | MS.gene82489 | 0.829918 | 3.93E-55 | -1.69E-46 |
| MS.gene053224 | MS.gene82489 | 0.807352 | 5.27E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82489.t1 | MTR_5g025120 | 98.522 | 406 | 6 | 0 | 2 | 407 | 3 | 408 | 0.0 | 816 |
| MS.gene82489.t1 | MTR_1g045410 | 96.296 | 405 | 15 | 0 | 3 | 407 | 2 | 406 | 0.0 | 754 |
| MS.gene82489.t1 | MTR_1g066990 | 93.812 | 404 | 25 | 0 | 4 | 407 | 2 | 405 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82489.t1 | AT3G09630 | 82.716 | 405 | 70 | 0 | 3 | 407 | 2 | 406 | 0.0 | 691 |
| MS.gene82489.t1 | AT3G09630 | 82.469 | 405 | 70 | 1 | 3 | 407 | 2 | 405 | 0.0 | 684 |
| MS.gene82489.t1 | AT5G02870 | 81.572 | 407 | 75 | 0 | 1 | 407 | 1 | 407 | 0.0 | 683 |
| MS.gene82489.t1 | AT5G02870 | 81.327 | 407 | 75 | 1 | 1 | 407 | 1 | 406 | 0.0 | 676 |
Find 138 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAATTGGATTCGATTTA+TGG | 0.106449 | 5.2:+15753854 | MS.gene82489:CDS |
| AAGGGACCGTTGATTGTTTA+TGG | 0.172085 | 5.2:+15753692 | MS.gene82489:CDS |
| GAAAACTAAGGAGGCTATTA+AGG | 0.230890 | 5.2:+15753565 | MS.gene82489:CDS |
| GCTTGCACCGGGTGGGCATT+TGG | 0.242314 | 5.2:+15753799 | MS.gene82489:CDS |
| GTTCCTCATCTTCCCCTTCC+CGG | 0.264935 | 5.2:-15753651 | None:intergenic |
| CGGTGGACATTTCCGATTCT+AGG | 0.271462 | 5.2:-15753106 | None:intergenic |
| CGTGCTGGTCAGGCTGCTTT+TGG | 0.280197 | 5.2:+15753335 | MS.gene82489:CDS |
| CCTGAGTTTCCTCTTGTTGT+TGG | 0.285780 | 5.2:+15753521 | MS.gene82489:CDS |
| AATTTGACAACTTCTCTAAA+TGG | 0.287943 | 5.2:+15756248 | MS.gene82489:CDS |
| AGCTTCTGCTATTCCTTCAT+TGG | 0.305726 | 5.2:+15753466 | MS.gene82489:CDS |
| TCACGTATTCCTCGTGTTGC+AGG | 0.319460 | 5.2:+15753299 | MS.gene82489:CDS |
| AGGTTTGGTGACCAGCTTTC+CGG | 0.324392 | 5.2:-15753244 | None:intergenic |
| CTCTTAACATCCTTCTTAAT+CGG | 0.329533 | 5.2:-15753992 | None:intergenic |
| CTTGCACCGGGTGGGCATTT+GGG | 0.333428 | 5.2:+15753800 | MS.gene82489:CDS |
| AGCTTTCCCTGCAGCCTTGA+TGG | 0.333710 | 5.2:-15756188 | None:intergenic |
| GCTGCTGCTGCGGCGGCCAT+TGG | 0.334418 | 5.2:-15753059 | None:intergenic |
| TGGTTCTTGCTCGTGGTCAT+AGG | 0.345540 | 5.2:+15753486 | MS.gene82489:CDS |
| AGAAATTGGATTCGATTTAT+GGG | 0.365248 | 5.2:+15753855 | MS.gene82489:CDS |
| ACATTTCCGATTCTAGGGTT+TGG | 0.372412 | 5.2:-15753100 | None:intergenic |
| TGGAAGGGTGGTTGGTGAAT+CGG | 0.372987 | 5.2:-15753126 | None:intergenic |
| ATTTGGGTAGGTTTGTGATT+TGG | 0.373636 | 5.2:+15753816 | MS.gene82489:CDS |
| CTCTTAGCAGTCTTGGCATA+AGG | 0.381657 | 5.2:-15754070 | None:intergenic |
| CGAAGGGGCGAAGGCGGTTA+AGG | 0.381946 | 5.2:+15753718 | MS.gene82489:CDS |
| CCCATGATTCAGCTGAGGTT+TGG | 0.398368 | 5.2:-15753259 | None:intergenic |
| GGAAGGGGAAGATGAGGAAC+AGG | 0.401302 | 5.2:+15753654 | MS.gene82489:CDS |
| CTTTGCTTGCTGAGGCTGAA+AGG | 0.401451 | 5.2:+15754098 | MS.gene82489:CDS |
| CCACAAGGATCTGGAGGAAA+TGG | 0.401682 | 5.2:+15753390 | MS.gene82489:CDS |
| TGGACGAAGTTGACGATGTC+AGG | 0.402562 | 5.2:-15753179 | None:intergenic |
| GCTGACGGCGTAAGGTTGTC+TGG | 0.404851 | 5.2:-15753222 | None:intergenic |
| ATTCCTCGTGTTGCAGGTGG+TGG | 0.407586 | 5.2:+15753305 | MS.gene82489:CDS |
| GAAGAGAAAGACTGTCTCTA+AGG | 0.412134 | 5.2:+15754150 | MS.gene82489:CDS |
| TTCCTCATCTTCCCCTTCCC+GGG | 0.419374 | 5.2:-15753650 | None:intergenic |
| GATTTATGGGACGTTTGATA+AGG | 0.419895 | 5.2:+15753868 | MS.gene82489:CDS |
| CATTTCCTCCAGATCCTTGT+GGG | 0.422522 | 5.2:-15753389 | None:intergenic |
| TGGGACCCACCGTGCTGGTC+AGG | 0.423632 | 5.2:+15753325 | MS.gene82489:CDS |
| TGTTTGCTCCCACAAGGATC+TGG | 0.440906 | 5.2:+15753381 | MS.gene82489:CDS |
| ACCAAACCTCAGCTGAATCA+TGG | 0.447157 | 5.2:+15753258 | MS.gene82489:CDS |
| ATTGAAGCACGCATGACATC+GGG | 0.449044 | 5.2:-15753152 | None:intergenic |
| TGCTGAGGCTGAAAGGGTTA+AGG | 0.459340 | 5.2:+15754105 | MS.gene82489:CDS |
| CTTAACCGCCTTCGCCCCTT+CGG | 0.464630 | 5.2:-15753717 | None:intergenic |
| ACAACTTCTCTAAATGGCTA+GGG | 0.469584 | 5.2:+15756254 | MS.gene82489:CDS |
| TTTGCTTGCTGAGGCTGAAA+GGG | 0.469665 | 5.2:+15754099 | MS.gene82489:CDS |
| AGCCATCCTCTTAGCAGTCT+TGG | 0.471110 | 5.2:-15754077 | None:intergenic |
| GCTTCTGCCATCAAGGCTGC+AGG | 0.471561 | 5.2:+15756181 | MS.gene82489:CDS |
| CCAAACCTCAGCTGAATCAT+GGG | 0.477617 | 5.2:+15753259 | MS.gene82489:CDS |
| GCTTTCCGGCTGACGGCGTA+AGG | 0.484743 | 5.2:-15753230 | None:intergenic |
| CACAATCCAAACCCTAGAAT+CGG | 0.486018 | 5.2:+15753094 | MS.gene82489:CDS |
| GGGACGTGCTGCTGCTGCGG+CGG | 0.488156 | 5.2:-15753066 | None:intergenic |
| GCACGCATGACATCGGGGAT+TGG | 0.488868 | 5.2:-15753146 | None:intergenic |
| GTGACCAGCTTTCCGGCTGA+CGG | 0.489052 | 5.2:-15753237 | None:intergenic |
| AAGGCTTCAGAGAAGAAGAA+AGG | 0.491969 | 5.2:+15753887 | MS.gene82489:CDS |
| AGAATCTTAATGTTATGCTC+AGG | 0.492457 | 5.2:+15754041 | MS.gene82489:CDS |
| TACGCCGTCAGCCGGAAAGC+TGG | 0.492481 | 5.2:+15753233 | MS.gene82489:CDS |
| CACCGGGTGGGCATTTGGGT+AGG | 0.501033 | 5.2:+15753804 | MS.gene82489:CDS |
| TGAAAGGGTTAAGGCTAAGA+AGG | 0.502198 | 5.2:+15754114 | MS.gene82489:CDS |
| GGTGGACATTTCCGATTCTA+GGG | 0.503679 | 5.2:-15753105 | None:intergenic |
| TGTGTTACCTAGGGCTAAGA+TGG | 0.505310 | 5.2:+15753913 | MS.gene82489:CDS |
| TCAAGGCTGCAGGGAAAGCT+TGG | 0.505941 | 5.2:+15756191 | MS.gene82489:CDS |
| GAAAAGGCCAAGGATAGCCT+TGG | 0.508889 | 5.2:+15753620 | MS.gene82489:CDS |
| AGGCTTCAGAGAAGAAGAAA+GGG | 0.509311 | 5.2:+15753888 | MS.gene82489:CDS |
| GACAACCTTACGCCGTCAGC+CGG | 0.509508 | 5.2:+15753225 | MS.gene82489:CDS |
| GTTGTTGGTGATGCTGCTGA+AGG | 0.512772 | 5.2:+15753536 | MS.gene82489:CDS |
| GTTTGTGATTTGGACTAAGT+CGG | 0.513758 | 5.2:+15753826 | MS.gene82489:CDS |
| GACAACTTCTCTAAATGGCT+AGG | 0.516462 | 5.2:+15756253 | MS.gene82489:CDS |
| GCATGACATCGGGGATTGGA+AGG | 0.518132 | 5.2:-15753142 | None:intergenic |
| CGATTAAGAAGGATGTTAAG+AGG | 0.519292 | 5.2:+15753993 | MS.gene82489:CDS |
| TCGGGGATTGGAAGGGTGGT+TGG | 0.519537 | 5.2:-15753134 | None:intergenic |
| GAGGATGGCTTTGCTTGCTG+AGG | 0.523283 | 5.2:+15754090 | MS.gene82489:CDS |
| GGAGGAAGCTTCTGCCATCA+AGG | 0.523621 | 5.2:+15756174 | MS.gene82489:intron |
| TCTAATCCCAAGGCTATCCT+TGG | 0.524268 | 5.2:-15753627 | None:intergenic |
| AATACGTGAAACAGCACGTC+CGG | 0.525790 | 5.2:-15753285 | None:intergenic |
| TTGGGATTAGACCCGGGAAG+GGG | 0.526474 | 5.2:+15753639 | MS.gene82489:CDS |
| CCATTTCCTCCAGATCCTTG+TGG | 0.531420 | 5.2:-15753390 | None:intergenic |
| AGAAAGGGTATGTGTTACCT+AGG | 0.534239 | 5.2:+15753903 | MS.gene82489:CDS |
| TGTTGTGAGGCCGATTAAGA+AGG | 0.535007 | 5.2:+15753982 | MS.gene82489:CDS |
| CCTTCATTGGTTCTTGCTCG+TGG | 0.536411 | 5.2:+15753479 | MS.gene82489:CDS |
| ATAACATTAAGATTCTTAAG+TGG | 0.536775 | 5.2:-15754034 | None:intergenic |
| TGCTGATGCTGAAAAGGCCA+AGG | 0.537379 | 5.2:+15753610 | MS.gene82489:CDS |
| AAAAGGCCAAGGATAGCCTT+GGG | 0.538830 | 5.2:+15753621 | MS.gene82489:CDS |
| TGGTGAATTCTGATTTGACT+AGG | 0.539110 | 5.2:+15753933 | MS.gene82489:CDS |
| CTAGGGTTTGGATTGTGACA+AGG | 0.543262 | 5.2:-15753088 | None:intergenic |
| TTGATTGTTTATGGTACCGA+AGG | 0.548502 | 5.2:+15753701 | MS.gene82489:CDS |
| GGTGGTGGGACCCACCGTGC+TGG | 0.549222 | 5.2:+15753320 | MS.gene82489:CDS |
| AACCTACCCAAATGCCCACC+CGG | 0.552263 | 5.2:-15753806 | None:intergenic |
| AGCAGCCTGACCAGCACGGT+GGG | 0.552373 | 5.2:-15753330 | None:intergenic |
| GACATCGGGGATTGGAAGGG+TGG | 0.554910 | 5.2:-15753138 | None:intergenic |
| CCTTGGGATTAGACCCGGGA+AGG | 0.558086 | 5.2:+15753637 | MS.gene82489:CDS |
| AAGGGGACGTGCTGCTGCTG+CGG | 0.559754 | 5.2:-15753069 | None:intergenic |
| TGATTGTTTATGGTACCGAA+GGG | 0.561790 | 5.2:+15753702 | MS.gene82489:CDS |
| TGGCGTTGAGATTACTAATG+TGG | 0.562146 | 5.2:+15753757 | MS.gene82489:CDS |
| GATTGAAGCACGCATGACAT+CGG | 0.563386 | 5.2:-15753153 | None:intergenic |
| CTTATGCCAAGACTGCTAAG+AGG | 0.565343 | 5.2:+15754071 | MS.gene82489:CDS |
| TTATGGTACCGAAGGGGCGA+AGG | 0.567293 | 5.2:+15753709 | MS.gene82489:CDS |
| GATAGCCTTGGGATTAGACC+CGG | 0.567327 | 5.2:+15753632 | MS.gene82489:CDS |
| CTTGGGATTAGACCCGGGAA+GGG | 0.569338 | 5.2:+15753638 | MS.gene82489:CDS |
| GAATTCACCATCTTAGCCCT+AGG | 0.569796 | 5.2:-15753920 | None:intergenic |
| TTCCTCGTGTTGCAGGTGGT+GGG | 0.571891 | 5.2:+15753306 | MS.gene82489:CDS |
| TCAGCTGAATCATGGGGTAC+CGG | 0.577134 | 5.2:+15753266 | MS.gene82489:CDS |
| CGAAGTTGACGATGTCAGGA+CGG | 0.577332 | 5.2:-15753175 | None:intergenic |
| CGTATTCCTCGTGTTGCAGG+TGG | 0.577884 | 5.2:+15753302 | MS.gene82489:CDS |
| TGAAGGAGTAGAGAAAACTA+AGG | 0.578428 | 5.2:+15753553 | MS.gene82489:CDS |
| CCTTCCCGGGTCTAATCCCA+AGG | 0.579401 | 5.2:-15753637 | None:intergenic |
| TAGGGTTTGGATTGTGACAA+GGG | 0.579491 | 5.2:-15753087 | None:intergenic |
| ACATTAGTAATCTCAACGCC+AGG | 0.581605 | 5.2:-15753755 | None:intergenic |
| CCACGAGCAAGAACCAATGA+AGG | 0.582084 | 5.2:-15753479 | None:intergenic |
| ATAATCAGAATCTGAGACCA+TGG | 0.582620 | 5.2:-15756221 | None:intergenic |
| GCAGCATCACCAACAACAAG+AGG | 0.587525 | 5.2:-15753530 | None:intergenic |
| CAACTTCTCTAAATGGCTAG+GGG | 0.592153 | 5.2:+15756255 | MS.gene82489:CDS |
| CATGACATCGGGGATTGGAA+GGG | 0.594076 | 5.2:-15753141 | None:intergenic |
| CAGGCGATATATATCGCGAA+AGG | 0.594349 | 5.2:+15753673 | MS.gene82489:CDS |
| GACCCGGGAAGGGGAAGATG+AGG | 0.595589 | 5.2:+15753648 | MS.gene82489:CDS |
| GGATCTGGAGGAAATGGCAT+AGG | 0.598192 | 5.2:+15753396 | MS.gene82489:CDS |
| CTTCTGCCATCAAGGCTGCA+GGG | 0.598308 | 5.2:+15756182 | MS.gene82489:CDS |
| TGCCAAGACTGCTAAGAGGA+TGG | 0.598875 | 5.2:+15754075 | MS.gene82489:CDS |
| AAGGGTGGTTGGTGAATCGG+TGG | 0.603978 | 5.2:-15753123 | None:intergenic |
| AGGCGATATATATCGCGAAA+GGG | 0.605240 | 5.2:+15753674 | MS.gene82489:CDS |
| CCAACAACAAGAGGAAACTC+AGG | 0.606988 | 5.2:-15753521 | None:intergenic |
| GAAAGGGTATGTGTTACCTA+GGG | 0.612369 | 5.2:+15753904 | MS.gene82489:CDS |
| AGGAGTAGAGAAAACTAAGG+AGG | 0.635842 | 5.2:+15753556 | MS.gene82489:CDS |
| GTAGAATGTTTGCTCCCACA+AGG | 0.636493 | 5.2:+15753375 | MS.gene82489:CDS |
| TCGGTACCATAAACAATCAA+CGG | 0.638403 | 5.2:-15753698 | None:intergenic |
| TGGTACCGAAGGGGCGAAGG+CGG | 0.639215 | 5.2:+15753712 | MS.gene82489:CDS |
| TAGGATTATTAATAGTGATG+AGG | 0.640452 | 5.2:+15753952 | MS.gene82489:CDS |
| GATTAAGAAGGATGTTAAGA+GGG | 0.643145 | 5.2:+15753994 | MS.gene82489:CDS |
| GTCCCACCACCTGCAACACG+AGG | 0.646810 | 5.2:-15753308 | None:intergenic |
| ATAGCCTTGGGATTAGACCC+GGG | 0.646880 | 5.2:+15753633 | MS.gene82489:CDS |
| TTGCTCCCACAAGGATCTGG+AGG | 0.649385 | 5.2:+15753384 | MS.gene82489:CDS |
| GGTACCCCATGATTCAGCTG+AGG | 0.655914 | 5.2:-15753264 | None:intergenic |
| AGGGTTTGGATTGTGACAAG+GGG | 0.658090 | 5.2:-15753086 | None:intergenic |
| TTGAGATTACTAATGTGGAG+AGG | 0.665025 | 5.2:+15753762 | MS.gene82489:CDS |
| CAAAAGCAGCCTGACCAGCA+CGG | 0.671346 | 5.2:-15753334 | None:intergenic |
| GATTGTTTATGGTACCGAAG+GGG | 0.679160 | 5.2:+15753703 | MS.gene82489:CDS |
| TTTGGTAACATGTGTCGTGG+TGG | 0.688796 | 5.2:+15753353 | MS.gene82489:CDS |
| AAGCAGCCTGACCAGCACGG+TGG | 0.701528 | 5.2:-15753331 | None:intergenic |
| ATGAGGTGCAGAGTGTTGTG+AGG | 0.702312 | 5.2:+15753969 | MS.gene82489:CDS |
| GAAAGCTTGGTATAACACCA+TGG | 0.705586 | 5.2:+15756204 | MS.gene82489:CDS |
| TTGAAGCACGCATGACATCG+GGG | 0.725773 | 5.2:-15753151 | None:intergenic |
| CAAACCTCAGCTGAATCATG+GGG | 0.734702 | 5.2:+15753260 | MS.gene82489:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTAATAGTTTTTGATT+TGG | + | chr5.2:15754626-15754645 | MS.gene82489:intron | 10.0% |
| !!! | TAATTAATAGTTTTTGATTT+GGG | + | chr5.2:15754627-15754646 | MS.gene82489:intron | 10.0% |
| !!! | TACAAAATGTTTTTAAAATA+TGG | - | chr5.2:15755088-15755107 | None:intergenic | 10.0% |
| !! | CATACTAAATTATTAAAGTT+TGG | - | chr5.2:15754569-15754588 | None:intergenic | 15.0% |
| !!! | AACTTAGTTTTATTTTAATC+TGG | - | chr5.2:15755488-15755507 | None:intergenic | 15.0% |
| !!! | ATAATTCATAGTTTTTGATT+TGG | + | chr5.2:15754774-15754793 | MS.gene82489:intron | 15.0% |
| !!! | ATTTAAATTTGAGATTGTAA+TGG | - | chr5.2:15755446-15755465 | None:intergenic | 15.0% |
| !!! | CAAATTTCTAAATTGATTTA+GGG | + | chr5.2:15755115-15755134 | MS.gene82489:intron | 15.0% |
| !!! | CTACTATTTTATTTAACAAT+TGG | + | chr5.2:15755665-15755684 | MS.gene82489:intron | 15.0% |
| !!! | TAATTCATAGTTTTTGATTT+GGG | + | chr5.2:15754775-15754794 | MS.gene82489:intron | 15.0% |
| !!! | TCTTTTTTTCTTTTGTTTTA+CGG | + | chr5.2:15755202-15755221 | MS.gene82489:intron | 15.0% |
| !!! | TTTTTAAAATATGGTCAATT+TGG | - | chr5.2:15755079-15755098 | None:intergenic | 15.0% |
| !! | ATAACATTAAGATTCTTAAG+TGG | - | chr5.2:15754037-15754056 | None:intergenic | 20.0% |
| !! | CCTAAATCAATTTAGAAATT+TGG | - | chr5.2:15755117-15755136 | None:intergenic | 20.0% |
| !! | GTAAAACAAAAGAAAAAAAG+AGG | - | chr5.2:15755203-15755222 | None:intergenic | 20.0% |
| !! | TCTTGCATGATAAATAATAA+GGG | - | chr5.2:15755701-15755720 | None:intergenic | 20.0% |
| !! | TTAGATTTAGTGCTTTAATT+AGG | + | chr5.2:15754444-15754463 | MS.gene82489:intron | 20.0% |
| !! | TTCTTGCATGATAAATAATA+AGG | - | chr5.2:15755702-15755721 | None:intergenic | 20.0% |
| !! | TTTCAACTAAAATCAAATAG+CGG | - | chr5.2:15755052-15755071 | None:intergenic | 20.0% |
| !!! | AAGTATTTTTTAGTTGTAAG+TGG | + | chr5.2:15755721-15755740 | MS.gene82489:intron | 20.0% |
| !!! | AATCTGGTTTGTATAATTTA+GGG | - | chr5.2:15755472-15755491 | None:intergenic | 20.0% |
| !!! | ACAATCTCAACTTTTATATA+AGG | - | chr5.2:15754483-15754502 | None:intergenic | 20.0% |
| !!! | AGTTTAAGACGATAAATAAA+TGG | - | chr5.2:15756118-15756137 | None:intergenic | 20.0% |
| !!! | ATTAAAGCACTAAATCTAAA+TGG | - | chr5.2:15754443-15754462 | None:intergenic | 20.0% |
| !!! | CCAAATTTCTAAATTGATTT+AGG | + | chr5.2:15755114-15755133 | MS.gene82489:intron | 20.0% |
| !!! | TAATCTGGTTTGTATAATTT+AGG | - | chr5.2:15755473-15755492 | None:intergenic | 20.0% |
| !!! | TTGATCATTTTATGTTGATT+TGG | + | chr5.2:15754327-15754346 | MS.gene82489:intron | 20.0% |
| ! | AATTTGACAACTTCTCTAAA+TGG | + | chr5.2:15756248-15756267 | MS.gene82489:CDS | 25.0% |
| ! | AGAAATTGGATTCGATTTAT+GGG | + | chr5.2:15753855-15753874 | MS.gene82489:CDS | 25.0% |
| ! | ATAAAATAGTAGAGTAAACC+AGG | - | chr5.2:15755657-15755676 | None:intergenic | 25.0% |
| ! | CATCTTAAGTTATCAAAACT+TGG | + | chr5.2:15755508-15755527 | MS.gene82489:intron | 25.0% |
| ! | TAGGATTATTAATAGTGATG+AGG | + | chr5.2:15753952-15753971 | MS.gene82489:CDS | 25.0% |
| ! | TTAAGACAATATAAGTGCAA+AGG | - | chr5.2:15754703-15754722 | None:intergenic | 25.0% |
| !!! | AAATTGATTTAGGGCATTTT+AGG | + | chr5.2:15755124-15755143 | MS.gene82489:intron | 25.0% |
| !!! | AATTGATTTAGGGCATTTTA+GGG | + | chr5.2:15755125-15755144 | MS.gene82489:intron | 25.0% |
| !!! | GTTCTCTATCTTTTGTTTTT+TGG | + | chr5.2:15755255-15755274 | MS.gene82489:intron | 25.0% |
| !!! | GTTTGTTTTTTGCAGAATAA+TGG | + | chr5.2:15755987-15756006 | MS.gene82489:intron | 25.0% |
| AATTAATAACTGCAATTCCC+AGG | - | chr5.2:15755771-15755790 | None:intergenic | 30.0% | |
| ACCATACAACAAAGTCTATT+TGG | - | chr5.2:15755160-15755179 | None:intergenic | 30.0% | |
| AGAATCTTAATGTTATGCTC+AGG | + | chr5.2:15754041-15754060 | MS.gene82489:CDS | 30.0% | |
| CATTCAAAAATCAAGCACAA+TGG | - | chr5.2:15754190-15754209 | None:intergenic | 30.0% | |
| CTCTTAACATCCTTCTTAAT+CGG | - | chr5.2:15753995-15754014 | None:intergenic | 30.0% | |
| GAGAAATTGGATTCGATTTA+TGG | + | chr5.2:15753854-15753873 | MS.gene82489:CDS | 30.0% | |
| GATTAAGAAGGATGTTAAGA+GGG | + | chr5.2:15753994-15754013 | MS.gene82489:CDS | 30.0% | |
| GTAATCATAGTAGTCAATAG+TGG | + | chr5.2:15754919-15754938 | MS.gene82489:intron | 30.0% | |
| TTAACTTCATGTGTAAGTGA+GGG | + | chr5.2:15754677-15754696 | MS.gene82489:intron | 30.0% | |
| TTTGATTCTATCGTGAAGAT+AGG | + | chr5.2:15754516-15754535 | MS.gene82489:intron | 30.0% | |
| ! | ACCAAATAGACTTTGTTGTA+TGG | + | chr5.2:15755156-15755175 | MS.gene82489:intron | 30.0% |
| ! | TTAGTTGTAAGTGGATTTGA+TGG | + | chr5.2:15755730-15755749 | MS.gene82489:intron | 30.0% |
| ! | TTTGTTTATACTCCCACTTT+TGG | + | chr5.2:15755365-15755384 | MS.gene82489:intron | 30.0% |
| !! | AGTTTTTGGAAATGTTGGAA+TGG | - | chr5.2:15753202-15753221 | None:intergenic | 30.0% |
| !! | TTGTTTATACTCCCACTTTT+GGG | + | chr5.2:15755366-15755385 | MS.gene82489:intron | 30.0% |
| !!! | AGTGGATGAGTTGATTTTTT+GGG | + | chr5.2:15755843-15755862 | MS.gene82489:intron | 30.0% |
| !!! | GCAGAATAATGGATGAATTT+TGG | + | chr5.2:15755998-15756017 | MS.gene82489:intron | 30.0% |
| !!! | GTTGATTTTTTGGGGAATAA+TGG | + | chr5.2:15755852-15755871 | MS.gene82489:intron | 30.0% |
| AAATCAAATAGCGGCTAAAG+CGG | - | chr5.2:15755043-15755062 | None:intergenic | 35.0% | |
| AACACAATCAGAAAGAAGCA+TGG | - | chr5.2:15755909-15755928 | None:intergenic | 35.0% | |
| ACAACTTCTCTAAATGGCTA+GGG | + | chr5.2:15756254-15756273 | MS.gene82489:CDS | 35.0% | |
| ACACGGTTGAATGTCTAAAT+TGG | - | chr5.2:15755947-15755966 | None:intergenic | 35.0% | |
| ACATTCATAGTAGTCGATCT+CGG | - | chr5.2:15755404-15755423 | None:intergenic | 35.0% | |
| ACTAGAACATACATCTCCTT+TGG | - | chr5.2:15754372-15754391 | None:intergenic | 35.0% | |
| AGTAAAGAGCAGAATATGCA+AGG | - | chr5.2:15755616-15755635 | None:intergenic | 35.0% | |
| ATTCTATCGTGAAGATAGGA+CGG | + | chr5.2:15754520-15754539 | MS.gene82489:intron | 35.0% | |
| ATTTGGGTAGGTTTGTGATT+TGG | + | chr5.2:15753816-15753835 | MS.gene82489:CDS | 35.0% | |
| CGATTAAGAAGGATGTTAAG+AGG | + | chr5.2:15753993-15754012 | MS.gene82489:CDS | 35.0% | |
| GAAAACTAAGGAGGCTATTA+AGG | + | chr5.2:15753565-15753584 | MS.gene82489:CDS | 35.0% | |
| GATTTATGGGACGTTTGATA+AGG | + | chr5.2:15753868-15753887 | MS.gene82489:CDS | 35.0% | |
| GATTTGAATTGTGATCTTGC+TGG | + | chr5.2:15754400-15754419 | MS.gene82489:intron | 35.0% | |
| GTTAACTTCATGTGTAAGTG+AGG | + | chr5.2:15754676-15754695 | MS.gene82489:intron | 35.0% | |
| TAAATAGTGACTGATCTTCC+TGG | + | chr5.2:15755636-15755655 | MS.gene82489:intron | 35.0% | |
| TCCACTCATCTAAATACACA+CGG | - | chr5.2:15755964-15755983 | None:intergenic | 35.0% | |
| TCGGTACCATAAACAATCAA+CGG | - | chr5.2:15753701-15753720 | None:intergenic | 35.0% | |
| TGAAGGAGTAGAGAAAACTA+AGG | + | chr5.2:15753553-15753572 | MS.gene82489:CDS | 35.0% | |
| TTGAGATTACTAATGTGGAG+AGG | + | chr5.2:15753762-15753781 | MS.gene82489:CDS | 35.0% | |
| ! | AGAAAGAAGCATGGAACATA+TGG | - | chr5.2:15755900-15755919 | None:intergenic | 35.0% |
| ! | ATAATCAGAATCTGAGACCA+TGG | - | chr5.2:15756224-15756243 | None:intergenic | 35.0% |
| ! | GTTTGTGATTTGGACTAAGT+CGG | + | chr5.2:15753826-15753845 | MS.gene82489:CDS | 35.0% |
| ! | TGATTGTTTATGGTACCGAA+GGG | + | chr5.2:15753702-15753721 | MS.gene82489:CDS | 35.0% |
| ! | TGATTTGGGTTTGTAGTGAT+TGG | + | chr5.2:15754641-15754660 | MS.gene82489:intron | 35.0% |
| ! | TGGTGAATTCTGATTTGACT+AGG | + | chr5.2:15753933-15753952 | MS.gene82489:CDS | 35.0% |
| ! | TTGATTGTTTATGGTACCGA+AGG | + | chr5.2:15753701-15753720 | MS.gene82489:CDS | 35.0% |
| !! | AAGGCTTTTAGGAATATTCC+TGG | + | chr5.2:15753737-15753756 | MS.gene82489:CDS | 35.0% |
| !! | TAAGTCGGCTTTTGAGAAAT+TGG | + | chr5.2:15753841-15753860 | MS.gene82489:CDS | 35.0% |
| !! | TCTGGAGTTTTTGGAAATGT+TGG | - | chr5.2:15753207-15753226 | None:intergenic | 35.0% |
| !! | TGTTTATACTCCCACTTTTG+GGG | + | chr5.2:15755367-15755386 | MS.gene82489:intron | 35.0% |
| !!! | ATTAAGGTTTTGAAGCAGGT+TGG | + | chr5.2:15753581-15753600 | MS.gene82489:CDS | 35.0% |
| !!! | GAGTGGATGAGTTGATTTTT+TGG | + | chr5.2:15755842-15755861 | MS.gene82489:intron | 35.0% |
| !!! | GTGGATGAGTTGATTTTTTG+GGG | + | chr5.2:15755844-15755863 | MS.gene82489:intron | 35.0% |
| AAACACAGTCAGAAAGAAGC+AGG | - | chr5.2:15756045-15756064 | None:intergenic | 40.0% | |
| AACACAGTCAGAAAGAAGCA+GGG | - | chr5.2:15756044-15756063 | None:intergenic | 40.0% | |
| AAGGCTTCAGAGAAGAAGAA+AGG | + | chr5.2:15753887-15753906 | MS.gene82489:CDS | 40.0% | |
| ACATTAGTAATCTCAACGCC+AGG | - | chr5.2:15753758-15753777 | None:intergenic | 40.0% | |
| ACCGTGTGTATTTAGATGAG+TGG | + | chr5.2:15755960-15755979 | MS.gene82489:intron | 40.0% | |
| AGAAAGAAGCAGGGAACATA+TGG | - | chr5.2:15756035-15756054 | None:intergenic | 40.0% | |
| AGCTTCTGCTATTCCTTCAT+TGG | + | chr5.2:15753466-15753485 | MS.gene82489:CDS | 40.0% | |
| AGGAGTAGAGAAAACTAAGG+AGG | + | chr5.2:15753556-15753575 | MS.gene82489:CDS | 40.0% | |
| AGGCGATATATATCGCGAAA+GGG | + | chr5.2:15753674-15753693 | MS.gene82489:CDS | 40.0% | |
| AGGCTTCAGAGAAGAAGAAA+GGG | + | chr5.2:15753888-15753907 | MS.gene82489:CDS | 40.0% | |
| CAACTTCTCTAAATGGCTAG+GGG | + | chr5.2:15756255-15756274 | MS.gene82489:CDS | 40.0% | |
| CACAATCCAAACCCTAGAAT+CGG | + | chr5.2:15753094-15753113 | MS.gene82489:CDS | 40.0% | |
| CATCCACTCATCTAAACACA+CGG | - | chr5.2:15755831-15755850 | None:intergenic | 40.0% | |
| GAAAGCTTGGTATAACACCA+TGG | + | chr5.2:15756204-15756223 | MS.gene82489:CDS | 40.0% | |
| GAAGAGAAAGACTGTCTCTA+AGG | + | chr5.2:15754150-15754169 | MS.gene82489:CDS | 40.0% | |
| GAAGCATGGAACATATGGAA+TGG | - | chr5.2:15755895-15755914 | None:intergenic | 40.0% | |
| GACAACTTCTCTAAATGGCT+AGG | + | chr5.2:15756253-15756272 | MS.gene82489:CDS | 40.0% | |
| TAGGGTTTGGATTGTGACAA+GGG | - | chr5.2:15753090-15753109 | None:intergenic | 40.0% | |
| TGAAAGGGTTAAGGCTAAGA+AGG | + | chr5.2:15754114-15754133 | MS.gene82489:CDS | 40.0% | |
| TTCTATCGTGAAGATAGGAC+GGG | + | chr5.2:15754521-15754540 | MS.gene82489:intron | 40.0% | |
| ! | AAGGGACCGTTGATTGTTTA+TGG | + | chr5.2:15753692-15753711 | MS.gene82489:CDS | 40.0% |
| ! | AGAAAGGGTATGTGTTACCT+AGG | + | chr5.2:15753903-15753922 | MS.gene82489:CDS | 40.0% |
| ! | GAAAGGGTATGTGTTACCTA+GGG | + | chr5.2:15753904-15753923 | MS.gene82489:CDS | 40.0% |
| ! | GATTGTTTATGGTACCGAAG+GGG | + | chr5.2:15753703-15753722 | MS.gene82489:CDS | 40.0% |
| ! | TGCTTTTGCTGATGCTGAAA+AGG | + | chr5.2:15753604-15753623 | MS.gene82489:CDS | 40.0% |
| ! | TGGCGTTGAGATTACTAATG+TGG | + | chr5.2:15753757-15753776 | MS.gene82489:CDS | 40.0% |
| !! | ACATTTCCGATTCTAGGGTT+TGG | - | chr5.2:15753103-15753122 | None:intergenic | 40.0% |
| !! | GTAAGGTTGTCTGGAGTTTT+TGG | - | chr5.2:15753216-15753235 | None:intergenic | 40.0% |
| !! | GTTGATTTGGTATTGCTCCT+AGG | + | chr5.2:15754340-15754359 | MS.gene82489:intron | 40.0% |
| !!! | AATCTTTTGAAGCTTGCACC+GGG | + | chr5.2:15753788-15753807 | MS.gene82489:CDS | 40.0% |
| !!! | GAATCTTTTGAAGCTTGCAC+CGG | + | chr5.2:15753787-15753806 | MS.gene82489:CDS | 40.0% |
| !!! | GGCTATTAAGGTTTTGAAGC+AGG | + | chr5.2:15753577-15753596 | MS.gene82489:CDS | 40.0% |
| !!! | GGGGAATAATGGATGACTTT+TGG | + | chr5.2:15755863-15755882 | MS.gene82489:intron | 40.0% |
| AAAAGGCCAAGGATAGCCTT+GGG | + | chr5.2:15753621-15753640 | MS.gene82489:CDS | 45.0% | |
| AATACGTGAAACAGCACGTC+CGG | - | chr5.2:15753288-15753307 | None:intergenic | 45.0% | |
| ACCAAACCTCAGCTGAATCA+TGG | + | chr5.2:15753258-15753277 | MS.gene82489:CDS | 45.0% | |
| AGAAGCTTCCTCCTGAAAGA+GGG | - | chr5.2:15756167-15756186 | None:intergenic | 45.0% | |
| AGGGTTTGGATTGTGACAAG+GGG | - | chr5.2:15753089-15753108 | None:intergenic | 45.0% | |
| ATCTCCTTTGGCAGAATCCT+AGG | - | chr5.2:15754360-15754379 | None:intergenic | 45.0% | |
| ATTGAAGCACGCATGACATC+GGG | - | chr5.2:15753155-15753174 | None:intergenic | 45.0% | |
| CAAACCTCAGCTGAATCATG+GGG | + | chr5.2:15753260-15753279 | MS.gene82489:CDS | 45.0% | |
| CAACCGTGTGTTTAGATGAG+TGG | + | chr5.2:15755825-15755844 | MS.gene82489:intron | 45.0% | |
| CAGGCGATATATATCGCGAA+AGG | + | chr5.2:15753673-15753692 | MS.gene82489:CDS | 45.0% | |
| CATTTCCTCCAGATCCTTGT+GGG | - | chr5.2:15753392-15753411 | None:intergenic | 45.0% | |
| CCAAACCTCAGCTGAATCAT+GGG | + | chr5.2:15753259-15753278 | MS.gene82489:CDS | 45.0% | |
| CCAACAACAAGAGGAAACTC+AGG | - | chr5.2:15753524-15753543 | None:intergenic | 45.0% | |
| CTAGGGTTTGGATTGTGACA+AGG | - | chr5.2:15753091-15753110 | None:intergenic | 45.0% | |
| CTCTTAGCAGTCTTGGCATA+AGG | - | chr5.2:15754073-15754092 | None:intergenic | 45.0% | |
| CTTATGCCAAGACTGCTAAG+AGG | + | chr5.2:15754071-15754090 | MS.gene82489:CDS | 45.0% | |
| GAAGCAGGGAACATATGGAA+TGG | - | chr5.2:15756030-15756049 | None:intergenic | 45.0% | |
| GAATTCACCATCTTAGCCCT+AGG | - | chr5.2:15753923-15753942 | None:intergenic | 45.0% | |
| GATTGAAGCACGCATGACAT+CGG | - | chr5.2:15753156-15753175 | None:intergenic | 45.0% | |
| GGATTCTCATCATGCTCTTG+AGG | + | chr5.2:15755529-15755548 | MS.gene82489:intron | 45.0% | |
| GGTGGACATTTCCGATTCTA+GGG | - | chr5.2:15753108-15753127 | None:intergenic | 45.0% | |
| GTAGAATGTTTGCTCCCACA+AGG | + | chr5.2:15753375-15753394 | MS.gene82489:CDS | 45.0% | |
| TAGTAGTCGATCTCGGAAAG+CGG | - | chr5.2:15755397-15755416 | None:intergenic | 45.0% | |
| TCTAATCCCAAGGCTATCCT+TGG | - | chr5.2:15753630-15753649 | None:intergenic | 45.0% | |
| TCTATCGTGAAGATAGGACG+GGG | + | chr5.2:15754522-15754541 | MS.gene82489:intron | 45.0% | |
| TGTGTTACCTAGGGCTAAGA+TGG | + | chr5.2:15753913-15753932 | MS.gene82489:CDS | 45.0% | |
| TGTGTTCCTTTCCCTCTTTC+AGG | + | chr5.2:15756153-15756172 | MS.gene82489:intron | 45.0% | |
| TGTTGTGAGGCCGATTAAGA+AGG | + | chr5.2:15753982-15754001 | MS.gene82489:CDS | 45.0% | |
| ! | AGTGGATTTGATGGCAGCTT+TGG | + | chr5.2:15755739-15755758 | MS.gene82489:intron | 45.0% |
| ! | CCTGAGTTTCCTCTTGTTGT+TGG | + | chr5.2:15753521-15753540 | MS.gene82489:CDS | 45.0% |
| ! | GGCAGCTTTGGTAAATTCCT+GGG | + | chr5.2:15755751-15755770 | MS.gene82489:intron | 45.0% |
| ! | TGGCAGCTTTGGTAAATTCC+TGG | + | chr5.2:15755750-15755769 | MS.gene82489:intron | 45.0% |
| ! | TTTGCTTGCTGAGGCTGAAA+GGG | + | chr5.2:15754099-15754118 | MS.gene82489:CDS | 45.0% |
| ! | TTTGGTAACATGTGTCGTGG+TGG | + | chr5.2:15753353-15753372 | MS.gene82489:CDS | 45.0% |
| !! | GCTTTTGGTAACATGTGTCG+TGG | + | chr5.2:15753350-15753369 | MS.gene82489:CDS | 45.0% |
| AGCCATCCTCTTAGCAGTCT+TGG | - | chr5.2:15754080-15754099 | None:intergenic | 50.0% | |
| CAGAAGCTTCCTCCTGAAAG+AGG | - | chr5.2:15756168-15756187 | None:intergenic | 50.0% | |
| CATGACATCGGGGATTGGAA+GGG | - | chr5.2:15753144-15753163 | None:intergenic | 50.0% | |
| CCACAAGGATCTGGAGGAAA+TGG | + | chr5.2:15753390-15753409 | MS.gene82489:CDS | 50.0% | |
| CCACGAGCAAGAACCAATGA+AGG | - | chr5.2:15753482-15753501 | None:intergenic | 50.0% | |
| CCATTTCCTCCAGATCCTTG+TGG | - | chr5.2:15753393-15753412 | None:intergenic | 50.0% | |
| CCCATGATTCAGCTGAGGTT+TGG | - | chr5.2:15753262-15753281 | None:intergenic | 50.0% | |
| CGAAGTTGACGATGTCAGGA+CGG | - | chr5.2:15753178-15753197 | None:intergenic | 50.0% | |
| CGGGGATCTCAATTGCATGA+AGG | + | chr5.2:15754540-15754559 | MS.gene82489:intron | 50.0% | |
| CGGTGGACATTTCCGATTCT+AGG | - | chr5.2:15753109-15753128 | None:intergenic | 50.0% | |
| CTTCCTCCTGAAAGAGGGAA+AGG | - | chr5.2:15756162-15756181 | None:intergenic | 50.0% | |
| GAAAAGGCCAAGGATAGCCT+TGG | + | chr5.2:15753620-15753639 | MS.gene82489:CDS | 50.0% | |
| GCAGCATCACCAACAACAAG+AGG | - | chr5.2:15753533-15753552 | None:intergenic | 50.0% | |
| GGATCTGGAGGAAATGGCAT+AGG | + | chr5.2:15753396-15753415 | MS.gene82489:CDS | 50.0% | |
| GTTCCTTTCCCTCTTTCAGG+AGG | + | chr5.2:15756156-15756175 | MS.gene82489:intron | 50.0% | |
| TCACGTATTCCTCGTGTTGC+AGG | + | chr5.2:15753299-15753318 | MS.gene82489:CDS | 50.0% | |
| TCAGCTGAATCATGGGGTAC+CGG | + | chr5.2:15753266-15753285 | MS.gene82489:CDS | 50.0% | |
| TGCCAAGACTGCTAAGAGGA+TGG | + | chr5.2:15754075-15754094 | MS.gene82489:CDS | 50.0% | |
| TGCTCCTAGGATTCTGCCAA+AGG | + | chr5.2:15754353-15754372 | MS.gene82489:intron | 50.0% | |
| TGCTGAGGCTGAAAGGGTTA+AGG | + | chr5.2:15754105-15754124 | MS.gene82489:CDS | 50.0% | |
| TGCTGATGCTGAAAAGGCCA+AGG | + | chr5.2:15753610-15753629 | MS.gene82489:CDS | 50.0% | |
| TGGACGAAGTTGACGATGTC+AGG | - | chr5.2:15753182-15753201 | None:intergenic | 50.0% | |
| TGGTTCTTGCTCGTGGTCAT+AGG | + | chr5.2:15753486-15753505 | MS.gene82489:CDS | 50.0% | |
| TGTTTGCTCCCACAAGGATC+TGG | + | chr5.2:15753381-15753400 | MS.gene82489:CDS | 50.0% | |
| TTGAAGCACGCATGACATCG+GGG | - | chr5.2:15753154-15753173 | None:intergenic | 50.0% | |
| ! | ATAGCCTTGGGATTAGACCC+GGG | + | chr5.2:15753633-15753652 | MS.gene82489:CDS | 50.0% |
| ! | CGAAGGCGGTTAAGGCTTTT+AGG | + | chr5.2:15753726-15753745 | MS.gene82489:CDS | 50.0% |
| ! | CTTTGCTTGCTGAGGCTGAA+AGG | + | chr5.2:15754098-15754117 | MS.gene82489:CDS | 50.0% |
| ! | GATAGCCTTGGGATTAGACC+CGG | + | chr5.2:15753632-15753651 | MS.gene82489:CDS | 50.0% |
| !! | AGGTTTGGTGACCAGCTTTC+CGG | - | chr5.2:15753247-15753266 | None:intergenic | 50.0% |
| !! | ATGAGGTGCAGAGTGTTGTG+AGG | + | chr5.2:15753969-15753988 | MS.gene82489:CDS | 50.0% |
| !! | CCTTCATTGGTTCTTGCTCG+TGG | + | chr5.2:15753479-15753498 | MS.gene82489:CDS | 50.0% |
| !! | GTTGTTGGTGATGCTGCTGA+AGG | + | chr5.2:15753536-15753555 | MS.gene82489:CDS | 50.0% |
| !! | TGGAAGGGTGGTTGGTGAAT+CGG | - | chr5.2:15753129-15753148 | None:intergenic | 50.0% |
| !!! | TTTTGAAGCTTGCACCGGGT+GGG | + | chr5.2:15753792-15753811 | MS.gene82489:CDS | 50.0% |
| AAAGCGGCTGACCCCAAAAG+TGG | - | chr5.2:15755381-15755400 | None:intergenic | 55.0% | |
| AACCTACCCAAATGCCCACC+CGG | - | chr5.2:15753809-15753828 | None:intergenic | 55.0% | |
| AAGCGGCTGACCCCAAAAGT+GGG | - | chr5.2:15755380-15755399 | None:intergenic | 55.0% | |
| AGCGGTGCGGAATAAGACAG+CGG | + | chr5.2:15754971-15754990 | MS.gene82489:intron | 55.0% | |
| AGCTTTCCCTGCAGCCTTGA+TGG | - | chr5.2:15756191-15756210 | None:intergenic | 55.0% | |
| ATTCCTCGTGTTGCAGGTGG+TGG | + | chr5.2:15753305-15753324 | MS.gene82489:CDS | 55.0% | |
| CAAAAGCAGCCTGACCAGCA+CGG | - | chr5.2:15753337-15753356 | None:intergenic | 55.0% | |
| CGTATTCCTCGTGTTGCAGG+TGG | + | chr5.2:15753302-15753321 | MS.gene82489:CDS | 55.0% | |
| CTTATTCCGCACCGCTACGA+CGG | - | chr5.2:15754967-15754986 | None:intergenic | 55.0% | |
| CTTCTGCCATCAAGGCTGCA+GGG | + | chr5.2:15756182-15756201 | MS.gene82489:CDS | 55.0% | |
| CTTGGGATTAGACCCGGGAA+GGG | + | chr5.2:15753638-15753657 | MS.gene82489:CDS | 55.0% | |
| GCATGACATCGGGGATTGGA+AGG | - | chr5.2:15753145-15753164 | None:intergenic | 55.0% | |
| GGAAGGGGAAGATGAGGAAC+AGG | + | chr5.2:15753654-15753673 | MS.gene82489:CDS | 55.0% | |
| GGAGGAAGCTTCTGCCATCA+AGG | + | chr5.2:15756174-15756193 | MS.gene82489:intron | 55.0% | |
| GGTACCCCATGATTCAGCTG+AGG | - | chr5.2:15753267-15753286 | None:intergenic | 55.0% | |
| GGTCGCTTCAGCTGCTATAG+CGG | + | chr5.2:15754992-15755011 | MS.gene82489:intron | 55.0% | |
| GTTCCTCATCTTCCCCTTCC+CGG | - | chr5.2:15753654-15753673 | None:intergenic | 55.0% | |
| TCAAGGCTGCAGGGAAAGCT+TGG | + | chr5.2:15756191-15756210 | MS.gene82489:CDS | 55.0% | |
| TTCCTCATCTTCCCCTTCCC+GGG | - | chr5.2:15753653-15753672 | None:intergenic | 55.0% | |
| TTCCTCGTGTTGCAGGTGGT+GGG | + | chr5.2:15753306-15753325 | MS.gene82489:CDS | 55.0% | |
| TTGCTCCCACAAGGATCTGG+AGG | + | chr5.2:15753384-15753403 | MS.gene82489:CDS | 55.0% | |
| TTGGGATTAGACCCGGGAAG+GGG | + | chr5.2:15753639-15753658 | MS.gene82489:CDS | 55.0% | |
| ! | GAGGATGGCTTTGCTTGCTG+AGG | + | chr5.2:15754090-15754109 | MS.gene82489:CDS | 55.0% |
| ! | TTATGGTACCGAAGGGGCGA+AGG | + | chr5.2:15753709-15753728 | MS.gene82489:CDS | 55.0% |
| !! | AAGGGTGGTTGGTGAATCGG+TGG | - | chr5.2:15753126-15753145 | None:intergenic | 55.0% |
| !!! | CTTTTGAAGCTTGCACCGGG+TGG | + | chr5.2:15753791-15753810 | MS.gene82489:CDS | 55.0% |
| CAGCTGCTATAGCGGCGTAG+TGG | + | chr5.2:15755000-15755019 | MS.gene82489:intron | 60.0% | |
| CCTTCCCGGGTCTAATCCCA+AGG | - | chr5.2:15753640-15753659 | None:intergenic | 60.0% | |
| CCTTGGGATTAGACCCGGGA+AGG | + | chr5.2:15753637-15753656 | MS.gene82489:CDS | 60.0% | |
| CGCTACGACGGTTAGCGTAG+CGG | - | chr5.2:15754955-15754974 | None:intergenic | 60.0% | |
| CGCTACGCTAACCGTCGTAG+CGG | + | chr5.2:15754953-15754972 | MS.gene82489:intron | 60.0% | |
| CTTAACCGCCTTCGCCCCTT+CGG | - | chr5.2:15753720-15753739 | None:intergenic | 60.0% | |
| CTTGCACCGGGTGGGCATTT+GGG | + | chr5.2:15753800-15753819 | MS.gene82489:CDS | 60.0% | |
| GACAACCTTACGCCGTCAGC+CGG | + | chr5.2:15753225-15753244 | MS.gene82489:CDS | 60.0% | |
| GACATCGGGGATTGGAAGGG+TGG | - | chr5.2:15753141-15753160 | None:intergenic | 60.0% | |
| GCACGCATGACATCGGGGAT+TGG | - | chr5.2:15753149-15753168 | None:intergenic | 60.0% | |
| GCTGACGGCGTAAGGTTGTC+TGG | - | chr5.2:15753225-15753244 | None:intergenic | 60.0% | |
| GCTTCTGCCATCAAGGCTGC+AGG | + | chr5.2:15756181-15756200 | MS.gene82489:CDS | 60.0% | |
| GTGACCAGCTTTCCGGCTGA+CGG | - | chr5.2:15753240-15753259 | None:intergenic | 60.0% | |
| TCGGGGATTGGAAGGGTGGT+TGG | - | chr5.2:15753137-15753156 | None:intergenic | 60.0% | |
| ! | GCTATAGCGGCGTAGTGGAG+CGG | + | chr5.2:15755005-15755024 | MS.gene82489:intron | 60.0% |
| !! | CGTGCTGGTCAGGCTGCTTT+TGG | + | chr5.2:15753335-15753354 | MS.gene82489:CDS | 60.0% |
| AAGCAGCCTGACCAGCACGG+TGG | - | chr5.2:15753334-15753353 | None:intergenic | 65.0% | |
| AGCAGCCTGACCAGCACGGT+GGG | - | chr5.2:15753333-15753352 | None:intergenic | 65.0% | |
| CACCGGGTGGGCATTTGGGT+AGG | + | chr5.2:15753804-15753823 | MS.gene82489:CDS | 65.0% | |
| CGAAGGGGCGAAGGCGGTTA+AGG | + | chr5.2:15753718-15753737 | MS.gene82489:CDS | 65.0% | |
| CGCTAACCGTCGTAGCGGTG+CGG | + | chr5.2:15754958-15754977 | MS.gene82489:intron | 65.0% | |
| GACCCGGGAAGGGGAAGATG+AGG | + | chr5.2:15753648-15753667 | MS.gene82489:CDS | 65.0% | |
| GCTTGCACCGGGTGGGCATT+TGG | + | chr5.2:15753799-15753818 | MS.gene82489:CDS | 65.0% | |
| GCTTTCCGGCTGACGGCGTA+AGG | - | chr5.2:15753233-15753252 | None:intergenic | 65.0% | |
| GTCCCACCACCTGCAACACG+AGG | - | chr5.2:15753311-15753330 | None:intergenic | 65.0% | |
| TACGCCGTCAGCCGGAAAGC+TGG | + | chr5.2:15753233-15753252 | MS.gene82489:CDS | 65.0% | |
| ! | AAGGGGACGTGCTGCTGCTG+CGG | - | chr5.2:15753072-15753091 | None:intergenic | 65.0% |
| ! | TGGTACCGAAGGGGCGAAGG+CGG | + | chr5.2:15753712-15753731 | MS.gene82489:CDS | 65.0% |
| GTTAGCGTAGCGGCGACGCG+TGG | - | chr5.2:15754945-15754964 | None:intergenic | 70.0% | |
| ! | AGCGGCGTAGTGGAGCGGAG+TGG | + | chr5.2:15755010-15755029 | MS.gene82489:intron | 70.0% |
| ! | TGGGACCCACCGTGCTGGTC+AGG | + | chr5.2:15753325-15753344 | MS.gene82489:CDS | 70.0% |
| ! | GGGACGTGCTGCTGCTGCGG+CGG | - | chr5.2:15753069-15753088 | None:intergenic | 75.0% |
| !! | GGTGGTGGGACCCACCGTGC+TGG | + | chr5.2:15753320-15753339 | MS.gene82489:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 15753062 | 15756288 | 15753062 | ID=MS.gene82489 |
| chr5.2 | mRNA | 15753062 | 15756288 | 15753062 | ID=MS.gene82489.t1;Parent=MS.gene82489 |
| chr5.2 | exon | 15753062 | 15754171 | 15753062 | ID=MS.gene82489.t1.exon1;Parent=MS.gene82489.t1 |
| chr5.2 | CDS | 15753062 | 15754171 | 15753062 | ID=cds.MS.gene82489.t1;Parent=MS.gene82489.t1 |
| chr5.2 | exon | 15756175 | 15756288 | 15756175 | ID=MS.gene82489.t1.exon2;Parent=MS.gene82489.t1 |
| chr5.2 | CDS | 15756175 | 15756288 | 15756175 | ID=cds.MS.gene82489.t1;Parent=MS.gene82489.t1 |
| Gene Sequence |
| Protein sequence |
