Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72708.t1 | XP_003612449.1 | 98 | 406 | 8 | 0 | 2 | 407 | 3 | 408 | 3.90E-217 | 763.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72708.t1 | Q9XF97 | 84.2 | 406 | 64 | 0 | 2 | 407 | 3 | 408 | 2.6e-193 | 676.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72708.t1 | B7FHR0 | 98.0 | 406 | 8 | 0 | 2 | 407 | 3 | 408 | 2.8e-217 | 763.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056978 | MS.gene72708 | 0.800716 | 1.26E-48 | -1.69E-46 |
| MS.gene058827 | MS.gene72708 | 0.81834 | 2.06E-52 | -1.69E-46 |
| MS.gene058828 | MS.gene72708 | 0.819085 | 1.40E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72708.t1 | MTR_5g025120 | 98.030 | 406 | 8 | 0 | 2 | 407 | 3 | 408 | 0.0 | 814 |
| MS.gene72708.t1 | MTR_1g045410 | 95.802 | 405 | 17 | 0 | 3 | 407 | 2 | 406 | 0.0 | 752 |
| MS.gene72708.t1 | MTR_1g066990 | 93.812 | 404 | 25 | 0 | 4 | 407 | 2 | 405 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72708.t1 | AT3G09630 | 82.716 | 405 | 70 | 0 | 3 | 407 | 2 | 406 | 0.0 | 691 |
| MS.gene72708.t1 | AT3G09630 | 82.469 | 405 | 70 | 1 | 3 | 407 | 2 | 405 | 0.0 | 684 |
| MS.gene72708.t1 | AT5G02870 | 81.572 | 407 | 75 | 0 | 1 | 407 | 1 | 407 | 0.0 | 682 |
| MS.gene72708.t1 | AT5G02870 | 81.327 | 407 | 75 | 1 | 1 | 407 | 1 | 406 | 0.0 | 676 |
Find 130 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAATTGGATTCGATTTA+TGG | 0.106859 | 5.4:+16284952 | MS.gene72708:CDS |
| AAGGGACCGTTGATTGTTTA+TGG | 0.170065 | 5.4:+16284790 | MS.gene72708:CDS |
| CTCTTAACATCCTTCTTAAT+TGG | 0.181814 | 5.4:-16285090 | None:intergenic |
| GAAAACTAAGGAGGCTATTA+AGG | 0.230890 | 5.4:+16284663 | MS.gene72708:CDS |
| GCTTGCACCGGGTGGGCATT+TGG | 0.242314 | 5.4:+16284897 | MS.gene72708:CDS |
| CGGTGGACATTTCCGATTCT+AGG | 0.271462 | 5.4:-16284204 | None:intergenic |
| ATTCCTCATCTTCCCCTTCC+CGG | 0.277492 | 5.4:-16284749 | None:intergenic |
| CGTGCTGGTCAGGCTGCTTT+TGG | 0.280197 | 5.4:+16284433 | MS.gene72708:CDS |
| CCTGAGTTTCCTCTTGTTGT+TGG | 0.285780 | 5.4:+16284619 | MS.gene72708:CDS |
| AATTTGACAACTTCTCTAAA+TGG | 0.287943 | 5.4:+16287364 | MS.gene72708:CDS |
| AGCTTCTGCTATTCCTTCAT+TGG | 0.305726 | 5.4:+16284564 | MS.gene72708:CDS |
| TCACGTATTCCTCGTGTTGC+AGG | 0.319460 | 5.4:+16284397 | MS.gene72708:CDS |
| AGGTTTGGTGACCAGCTTTC+CGG | 0.324392 | 5.4:-16284342 | None:intergenic |
| CTTGCACCGGGTGGGCATTT+GGG | 0.333428 | 5.4:+16284898 | MS.gene72708:CDS |
| AGCTTTCCCTGCAGCCTTGA+TGG | 0.333710 | 5.4:-16287304 | None:intergenic |
| GCTGCTGCTGCGGCGGCCAT+TGG | 0.334418 | 5.4:-16284157 | None:intergenic |
| TGGTTCTTGCTCGTGGTCAT+AGG | 0.345540 | 5.4:+16284584 | MS.gene72708:CDS |
| AGAAATTGGATTCGATTTAT+GGG | 0.370066 | 5.4:+16284953 | MS.gene72708:CDS |
| ACATTTCCGATTCTAGGGTT+TGG | 0.372412 | 5.4:-16284198 | None:intergenic |
| ATTTGGGTAGGTTTGTGATT+TGG | 0.373636 | 5.4:+16284914 | MS.gene72708:CDS |
| CTCTTAGCAGTCTTGGCATA+AGG | 0.381657 | 5.4:-16285168 | None:intergenic |
| CGACTAGGATCTGGAGGAAA+TGG | 0.383246 | 5.4:+16284488 | MS.gene72708:CDS |
| GATTTATGGGTCGTTTGATA+AGG | 0.391731 | 5.4:+16284966 | MS.gene72708:CDS |
| TGGAAGTGTGGTTGGTGAAT+CGG | 0.397104 | 5.4:-16284224 | None:intergenic |
| CCCATGATTCAGCTGAGGTT+TGG | 0.398368 | 5.4:-16284357 | None:intergenic |
| CTTTGCTTGCTGAGGCTGAA+AGG | 0.401451 | 5.4:+16285196 | MS.gene72708:CDS |
| TGGACGAAGTTGACGATGTC+AGG | 0.402562 | 5.4:-16284277 | None:intergenic |
| ATTGAAGCGCGCATGACATC+GGG | 0.403789 | 5.4:-16284250 | None:intergenic |
| GCTGACGGCGTAAGGTTGTC+TGG | 0.404851 | 5.4:-16284320 | None:intergenic |
| TGAAGGGGCGAAGGCGGTTA+AGG | 0.407318 | 5.4:+16284816 | MS.gene72708:CDS |
| ATTCCTCGTGTTGCAGGTGG+TGG | 0.407586 | 5.4:+16284403 | MS.gene72708:CDS |
| GAAGAGAAAGACTGTCTCTA+AGG | 0.412134 | 5.4:+16285248 | MS.gene72708:CDS |
| TGGGACCCACCGTGCTGGTC+AGG | 0.423632 | 5.4:+16284423 | MS.gene72708:CDS |
| TTCCTCATCTTCCCCTTCCC+GGG | 0.435752 | 5.4:-16284748 | None:intergenic |
| TGTTTGCTCCGACTAGGATC+TGG | 0.436823 | 5.4:+16284479 | MS.gene72708:CDS |
| ATAACATTAAGATTCTTAAG+AGG | 0.441145 | 5.4:-16285132 | None:intergenic |
| ACCAAACCTCAGCTGAATCA+TGG | 0.447157 | 5.4:+16284356 | MS.gene72708:CDS |
| GGAAGGGGAAGATGAGGAAT+AGG | 0.459223 | 5.4:+16284752 | MS.gene72708:CDS |
| TGCTGAGGCTGAAAGGGTTA+AGG | 0.459340 | 5.4:+16285203 | MS.gene72708:CDS |
| ACAACTTCTCTAAATGGCTA+GGG | 0.469584 | 5.4:+16287370 | MS.gene72708:CDS |
| TTTGCTTGCTGAGGCTGAAA+GGG | 0.469665 | 5.4:+16285197 | MS.gene72708:CDS |
| AGCCATCCTCTTAGCAGTCT+TGG | 0.471110 | 5.4:-16285175 | None:intergenic |
| GCTTCTGCCATCAAGGCTGC+AGG | 0.471561 | 5.4:+16287297 | MS.gene72708:CDS |
| CCAAACCTCAGCTGAATCAT+GGG | 0.477617 | 5.4:+16284357 | MS.gene72708:CDS |
| TGGGTCGTTTGATAAGGCTT+CGG | 0.480693 | 5.4:+16284972 | MS.gene72708:CDS |
| GCTTTCCGGCTGACGGCGTA+AGG | 0.484743 | 5.4:-16284328 | None:intergenic |
| GCGCGCATGACATCGGGGAT+TGG | 0.485313 | 5.4:-16284244 | None:intergenic |
| CACAATCCAAACCCTAGAAT+CGG | 0.486018 | 5.4:+16284192 | MS.gene72708:CDS |
| GGGACGTGCTGCTGCTGCGG+CGG | 0.488156 | 5.4:-16284164 | None:intergenic |
| GTGACCAGCTTTCCGGCTGA+CGG | 0.489052 | 5.4:-16284335 | None:intergenic |
| GTTGTTGGTGATGCTGCTGA+AGG | 0.490821 | 5.4:+16284634 | MS.gene72708:CDS |
| AGAATCTTAATGTTATGCTC+AGG | 0.492457 | 5.4:+16285139 | MS.gene72708:CDS |
| TACGCCGTCAGCCGGAAAGC+TGG | 0.492481 | 5.4:+16284331 | MS.gene72708:CDS |
| CACCGGGTGGGCATTTGGGT+AGG | 0.501033 | 5.4:+16284902 | MS.gene72708:CDS |
| TGAAAGGGTTAAGGCTAAGA+AGG | 0.502198 | 5.4:+16285212 | MS.gene72708:CDS |
| GGTGGACATTTCCGATTCTA+GGG | 0.503679 | 5.4:-16284203 | None:intergenic |
| TCAAGGCTGCAGGGAAAGCT+TGG | 0.505941 | 5.4:+16287307 | MS.gene72708:CDS |
| GAAAAGGCCAAGGATAGCCT+TGG | 0.508889 | 5.4:+16284718 | MS.gene72708:CDS |
| GACAACCTTACGCCGTCAGC+CGG | 0.509508 | 5.4:+16284323 | MS.gene72708:CDS |
| TCAGCTGAATCATGGGGTAC+TGG | 0.514169 | 5.4:+16284364 | MS.gene72708:CDS |
| GACAACTTCTCTAAATGGCT+AGG | 0.516462 | 5.4:+16287369 | MS.gene72708:CDS |
| GATTGAAGCGCGCATGACAT+CGG | 0.517703 | 5.4:-16284251 | None:intergenic |
| TTGATTGTTTATGGTACTGA+AGG | 0.517929 | 5.4:+16284799 | MS.gene72708:CDS |
| TAGGCGATATATATCGCGTA+AGG | 0.520552 | 5.4:+16284771 | MS.gene72708:CDS |
| GAGGATGGCTTTGCTTGCTG+AGG | 0.523283 | 5.4:+16285188 | MS.gene72708:CDS |
| GGAGGAAGCTTCTGCCATCA+AGG | 0.523621 | 5.4:+16287290 | MS.gene72708:intron |
| TCTAATCCCAAGGCTATCCT+TGG | 0.524268 | 5.4:-16284725 | None:intergenic |
| TTGGGATTAGACCCGGGAAG+GGG | 0.526474 | 5.4:+16284737 | MS.gene72708:CDS |
| CAATTAAGAAGGATGTTAAG+AGG | 0.528802 | 5.4:+16285091 | MS.gene72708:CDS |
| TGATTGTTTATGGTACTGAA+GGG | 0.536027 | 5.4:+16284800 | MS.gene72708:CDS |
| CCTTCATTGGTTCTTGCTCG+TGG | 0.536411 | 5.4:+16284577 | MS.gene72708:CDS |
| TGCTGATGCTGAAAAGGCCA+AGG | 0.537379 | 5.4:+16284708 | MS.gene72708:CDS |
| AAAAGGCCAAGGATAGCCTT+GGG | 0.538830 | 5.4:+16284719 | MS.gene72708:CDS |
| TGGTGAATTCTGATTTGACT+AGG | 0.539110 | 5.4:+16285031 | MS.gene72708:CDS |
| CTAGGGTTTGGATTGTGACA+AGG | 0.543262 | 5.4:-16284186 | None:intergenic |
| TGTTGTGAGGCCAATTAAGA+AGG | 0.543329 | 5.4:+16285080 | MS.gene72708:CDS |
| AAGGCTTCGGAGAAGAAGAA+AGG | 0.545763 | 5.4:+16284985 | MS.gene72708:CDS |
| TCGGGGATTGGAAGTGTGGT+TGG | 0.548750 | 5.4:-16284232 | None:intergenic |
| GGTGGTGGGACCCACCGTGC+TGG | 0.549222 | 5.4:+16284418 | MS.gene72708:CDS |
| AACCTACCCAAATGCCCACC+CGG | 0.552263 | 5.4:-16284904 | None:intergenic |
| AGCAGCCTGACCAGCACGGT+GGG | 0.552373 | 5.4:-16284428 | None:intergenic |
| CCTTGGGATTAGACCCGGGA+AGG | 0.558086 | 5.4:+16284735 | MS.gene72708:CDS |
| TGAAGGATTAGAGAAAACTA+AGG | 0.559116 | 5.4:+16284651 | MS.gene72708:CDS |
| AAGGGGACGTGCTGCTGCTG+CGG | 0.559754 | 5.4:-16284167 | None:intergenic |
| CTTATGCCAAGACTGCTAAG+AGG | 0.565343 | 5.4:+16285169 | MS.gene72708:CDS |
| GATAGCCTTGGGATTAGACC+CGG | 0.567327 | 5.4:+16284730 | MS.gene72708:CDS |
| CTTGGGATTAGACCCGGGAA+GGG | 0.569338 | 5.4:+16284736 | MS.gene72708:CDS |
| GAATTCACCATCTTAGCCCT+AGG | 0.569796 | 5.4:-16285018 | None:intergenic |
| TTATGGTACTGAAGGGGCGA+AGG | 0.571791 | 5.4:+16284807 | MS.gene72708:CDS |
| TTCCTCGTGTTGCAGGTGGT+GGG | 0.571891 | 5.4:+16284404 | MS.gene72708:CDS |
| CGAAGTTGACGATGTCAGGA+CGG | 0.577332 | 5.4:-16284273 | None:intergenic |
| CGTATTCCTCGTGTTGCAGG+TGG | 0.577884 | 5.4:+16284400 | MS.gene72708:CDS |
| CCTTCCCGGGTCTAATCCCA+AGG | 0.579401 | 5.4:-16284735 | None:intergenic |
| TAGGGTTTGGATTGTGACAA+GGG | 0.579491 | 5.4:-16284185 | None:intergenic |
| CCACGAGCAAGAACCAATGA+AGG | 0.582084 | 5.4:-16284577 | None:intergenic |
| ATAATCAGAATCTGAGACCA+TGG | 0.582620 | 5.4:-16287337 | None:intergenic |
| GCAGCATCACCAACAACAAG+AGG | 0.587525 | 5.4:-16284628 | None:intergenic |
| CAACTTCTCTAAATGGCTAG+GGG | 0.592153 | 5.4:+16287371 | MS.gene72708:CDS |
| GACCCGGGAAGGGGAAGATG+AGG | 0.594126 | 5.4:+16284746 | MS.gene72708:CDS |
| GGATCTGGAGGAAATGGCAT+AGG | 0.595709 | 5.4:+16284494 | MS.gene72708:CDS |
| CTTCTGCCATCAAGGCTGCA+GGG | 0.598308 | 5.4:+16287298 | MS.gene72708:CDS |
| TGCCAAGACTGCTAAGAGGA+TGG | 0.598875 | 5.4:+16285173 | MS.gene72708:CDS |
| TGGTGTTGAGATTACTAATG+TGG | 0.599446 | 5.4:+16284855 | MS.gene72708:CDS |
| GTAGAATGTTTGCTCCGACT+AGG | 0.599712 | 5.4:+16284473 | MS.gene72708:CDS |
| AATTAAGAAGGATGTTAAGA+GGG | 0.600812 | 5.4:+16285092 | MS.gene72708:CDS |
| AGGCTTCGGAGAAGAAGAAA+GGG | 0.601116 | 5.4:+16284986 | MS.gene72708:CDS |
| GACATCGGGGATTGGAAGTG+TGG | 0.605713 | 5.4:-16284236 | None:intergenic |
| CCAACAACAAGAGGAAACTC+AGG | 0.606988 | 5.4:-16284619 | None:intergenic |
| CATTTCCTCCAGATCCTAGT+CGG | 0.610904 | 5.4:-16284487 | None:intergenic |
| GATTGTTTATGGTACTGAAG+GGG | 0.617143 | 5.4:+16284801 | MS.gene72708:CDS |
| TGGTACTGAAGGGGCGAAGG+CGG | 0.619937 | 5.4:+16284810 | MS.gene72708:CDS |
| TAGGATTATTAATAGTGATG+AGG | 0.640452 | 5.4:+16285050 | MS.gene72708:CDS |
| TCAGTACCATAAACAATCAA+CGG | 0.642392 | 5.4:-16284796 | None:intergenic |
| GTCCCACCACCTGCAACACG+AGG | 0.646810 | 5.4:-16284406 | None:intergenic |
| ATAGCCTTGGGATTAGACCC+GGG | 0.646880 | 5.4:+16284731 | MS.gene72708:CDS |
| TTGCTCCGACTAGGATCTGG+AGG | 0.651327 | 5.4:+16284482 | MS.gene72708:CDS |
| TTGAGATTACTAATGTGGAG+AGG | 0.654222 | 5.4:+16284860 | MS.gene72708:CDS |
| AGGATTAGAGAAAACTAAGG+AGG | 0.654690 | 5.4:+16284654 | MS.gene72708:CDS |
| AGGGTTTGGATTGTGACAAG+GGG | 0.658090 | 5.4:-16284184 | None:intergenic |
| AGGCGATATATATCGCGTAA+GGG | 0.658931 | 5.4:+16284772 | MS.gene72708:CDS |
| AGTACCCCATGATTCAGCTG+AGG | 0.659409 | 5.4:-16284362 | None:intergenic |
| CAAAAGCAGCCTGACCAGCA+CGG | 0.671346 | 5.4:-16284432 | None:intergenic |
| ACATTAGTAATCTCAACACC+AGG | 0.671385 | 5.4:-16284853 | None:intergenic |
| AAGTGTGGTTGGTGAATCGG+TGG | 0.675020 | 5.4:-16284221 | None:intergenic |
| TTTGGTAACATGTGTCGTGG+TGG | 0.688796 | 5.4:+16284451 | MS.gene72708:CDS |
| AAGCAGCCTGACCAGCACGG+TGG | 0.701528 | 5.4:-16284429 | None:intergenic |
| GAAAGCTTGGTATAACACCA+TGG | 0.705586 | 5.4:+16287320 | MS.gene72708:CDS |
| TTGAAGCGCGCATGACATCG+GGG | 0.713461 | 5.4:-16284249 | None:intergenic |
| ATGAGGTGCAGAGTGTTGTG+AGG | 0.717794 | 5.4:+16285067 | MS.gene72708:CDS |
| CAAACCTCAGCTGAATCATG+GGG | 0.734702 | 5.4:+16284358 | MS.gene72708:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACTAAATTATTAAAGTT+TGG | - | chr5.4:16285668-16285687 | None:intergenic | 10.0% |
| !!! | ATAATTAATAGTTTTTGATT+TGG | + | chr5.4:16285724-16285743 | MS.gene72708:intron | 10.0% |
| !!! | TAATTAATAGTTTTTGATTT+GGG | + | chr5.4:16285725-16285744 | MS.gene72708:intron | 10.0% |
| !!! | TACAAAATGTTTTTAAAATA+TGG | - | chr5.4:16286186-16286205 | None:intergenic | 10.0% |
| !!! | AACTTAGTTTTATTTTAATC+TGG | - | chr5.4:16286596-16286615 | None:intergenic | 15.0% |
| !!! | AGTTTAAGACAATAATTAAA+TGG | - | chr5.4:16287234-16287253 | None:intergenic | 15.0% |
| !!! | ATAATTCATAGTTTTTGATT+TGG | + | chr5.4:16285872-16285891 | MS.gene72708:intron | 15.0% |
| !!! | CAAATTTCTAAATTGATTTA+GGG | + | chr5.4:16286213-16286232 | MS.gene72708:intron | 15.0% |
| !!! | TAATTCATAGTTTTTGATTT+GGG | + | chr5.4:16285873-16285892 | MS.gene72708:intron | 15.0% |
| !!! | TTTTTAAAATATGGTCAATT+TGG | - | chr5.4:16286177-16286196 | None:intergenic | 15.0% |
| !! | ATAAAATAGTAGAGTAAACT+AGG | - | chr5.4:16286765-16286784 | None:intergenic | 20.0% |
| !! | ATAACATTAAGATTCTTAAG+AGG | - | chr5.4:16285135-16285154 | None:intergenic | 20.0% |
| !! | CCTAAATCAATTTAGAAATT+TGG | - | chr5.4:16286215-16286234 | None:intergenic | 20.0% |
| !! | TCTTGCATGATAAATAATAA+GGG | - | chr5.4:16286809-16286828 | None:intergenic | 20.0% |
| !! | TTAGATTTAGTGCTTTAATT+AGG | + | chr5.4:16285542-16285561 | MS.gene72708:intron | 20.0% |
| !! | TTCTTGCATGATAAATAATA+AGG | - | chr5.4:16286810-16286829 | None:intergenic | 20.0% |
| !! | TTTCAACTAAAATCAAATAG+CGG | - | chr5.4:16286150-16286169 | None:intergenic | 20.0% |
| !!! | AAGTATTTTTTAGTTGTAAG+TGG | + | chr5.4:16286829-16286848 | MS.gene72708:intron | 20.0% |
| !!! | AATCTGGTTTGTATAATTTA+GGG | - | chr5.4:16286580-16286599 | None:intergenic | 20.0% |
| !!! | ACAATCTCAACTTTTATATA+AGG | - | chr5.4:16285581-16285600 | None:intergenic | 20.0% |
| !!! | ATTAAAGCACTAAATCTAAA+TGG | - | chr5.4:16285541-16285560 | None:intergenic | 20.0% |
| !!! | ATTTAGATTTGAGATTGTAA+TGG | - | chr5.4:16286554-16286573 | None:intergenic | 20.0% |
| !!! | CCAAATTTCTAAATTGATTT+AGG | + | chr5.4:16286212-16286231 | MS.gene72708:intron | 20.0% |
| !!! | CCTTTTTTTTTCTTGTTTTA+CGG | + | chr5.4:16286298-16286317 | MS.gene72708:intron | 20.0% |
| !!! | TAATCTGGTTTGTATAATTT+AGG | - | chr5.4:16286581-16286600 | None:intergenic | 20.0% |
| !!! | TTGATCATTTTATGTTGATT+TGG | + | chr5.4:16285425-16285444 | MS.gene72708:intron | 20.0% |
| ! | AATTAAGAAGGATGTTAAGA+GGG | + | chr5.4:16285092-16285111 | MS.gene72708:CDS | 25.0% |
| ! | AATTTGACAACTTCTCTAAA+TGG | + | chr5.4:16287364-16287383 | MS.gene72708:CDS | 25.0% |
| ! | AGAAATTGGATTCGATTTAT+GGG | + | chr5.4:16284953-16284972 | MS.gene72708:CDS | 25.0% |
| ! | CATCTTAAGTTATCAAAACT+TGG | + | chr5.4:16286616-16286635 | MS.gene72708:intron | 25.0% |
| ! | CCGTAAAACAAGAAAAAAAA+AGG | - | chr5.4:16286301-16286320 | None:intergenic | 25.0% |
| ! | TAGGATTATTAATAGTGATG+AGG | + | chr5.4:16285050-16285069 | MS.gene72708:CDS | 25.0% |
| ! | TTAAGACAATATAAGTGCAA+AGG | - | chr5.4:16285801-16285820 | None:intergenic | 25.0% |
| !!! | AAATTGATTTAGGGCATTTT+AGG | + | chr5.4:16286222-16286241 | MS.gene72708:intron | 25.0% |
| !!! | AATTGATTTAGGGCATTTTA+GGG | + | chr5.4:16286223-16286242 | MS.gene72708:intron | 25.0% |
| !!! | GTTCTCTATCTTTTGTTTTT+TGG | + | chr5.4:16286351-16286370 | MS.gene72708:intron | 25.0% |
| !!! | GTTTGTTTTTTGCAGAATAA+TGG | + | chr5.4:16287103-16287122 | MS.gene72708:intron | 25.0% |
| AATTAATAACTGCAATTCCC+AGG | - | chr5.4:16286879-16286898 | None:intergenic | 30.0% | |
| ACATTCATAGTAGTTGATCT+CGG | - | chr5.4:16286512-16286531 | None:intergenic | 30.0% | |
| ACCATACAACAAAGTCTATT+TGG | - | chr5.4:16286258-16286277 | None:intergenic | 30.0% | |
| AGAATCTTAATGTTATGCTC+AGG | + | chr5.4:16285139-16285158 | MS.gene72708:CDS | 30.0% | |
| CAATTAAGAAGGATGTTAAG+AGG | + | chr5.4:16285091-16285110 | MS.gene72708:CDS | 30.0% | |
| CATTCAAAAATCAAGCACAA+TGG | - | chr5.4:16285288-16285307 | None:intergenic | 30.0% | |
| CTCTTAACATCCTTCTTAAT+TGG | - | chr5.4:16285093-16285112 | None:intergenic | 30.0% | |
| GAGAAATTGGATTCGATTTA+TGG | + | chr5.4:16284952-16284971 | MS.gene72708:CDS | 30.0% | |
| GTAATCATAGTAGTCAATAG+TGG | + | chr5.4:16286017-16286036 | MS.gene72708:intron | 30.0% | |
| TCAGTACCATAAACAATCAA+CGG | - | chr5.4:16284799-16284818 | None:intergenic | 30.0% | |
| TGAAGGATTAGAGAAAACTA+AGG | + | chr5.4:16284651-16284670 | MS.gene72708:CDS | 30.0% | |
| TTAACTTCATGTGTAAGTGA+GGG | + | chr5.4:16285775-16285794 | MS.gene72708:intron | 30.0% | |
| TTTGATTCTATCGTGAAGAT+AGG | + | chr5.4:16285615-16285634 | MS.gene72708:intron | 30.0% | |
| ! | ACCAAATAGACTTTGTTGTA+TGG | + | chr5.4:16286254-16286273 | MS.gene72708:intron | 30.0% |
| ! | TGATTGTTTATGGTACTGAA+GGG | + | chr5.4:16284800-16284819 | MS.gene72708:CDS | 30.0% |
| ! | TTAGTTGTAAGTGGATTTGA+TGG | + | chr5.4:16286838-16286857 | MS.gene72708:intron | 30.0% |
| ! | TTGATTGTTTATGGTACTGA+AGG | + | chr5.4:16284799-16284818 | MS.gene72708:CDS | 30.0% |
| ! | TTTGTTTATACTCCCACTTT+TGG | + | chr5.4:16286463-16286482 | MS.gene72708:intron | 30.0% |
| !! | AGTTTTTGGAAATGTTGGAA+TGG | - | chr5.4:16284300-16284319 | None:intergenic | 30.0% |
| !! | TAAGTCTGCTTTTGAGAAAT+TGG | + | chr5.4:16284939-16284958 | MS.gene72708:CDS | 30.0% |
| !! | TTGTTTATACTCCCACTTTT+GGG | + | chr5.4:16286464-16286483 | MS.gene72708:intron | 30.0% |
| !!! | AGTGGATGAGTTGATTTTTT+GGG | + | chr5.4:16286951-16286970 | MS.gene72708:intron | 30.0% |
| !!! | GCAGAATAATGGATGAATTT+TGG | + | chr5.4:16287114-16287133 | MS.gene72708:intron | 30.0% |
| !!! | GTTGATTTTTTGGGGAATAA+TGG | + | chr5.4:16286960-16286979 | MS.gene72708:intron | 30.0% |
| AAATCAAATAGCGGCTAAAG+CGG | - | chr5.4:16286141-16286160 | None:intergenic | 35.0% | |
| ACAACTTCTCTAAATGGCTA+GGG | + | chr5.4:16287370-16287389 | MS.gene72708:CDS | 35.0% | |
| ACACGGTTGAATGTCTAAAT+TGG | - | chr5.4:16287063-16287082 | None:intergenic | 35.0% | |
| ACATTAGTAATCTCAACACC+AGG | - | chr5.4:16284856-16284875 | None:intergenic | 35.0% | |
| ACTAGAACATACATCTCCTT+TGG | - | chr5.4:16285470-16285489 | None:intergenic | 35.0% | |
| AGGATTAGAGAAAACTAAGG+AGG | + | chr5.4:16284654-16284673 | MS.gene72708:CDS | 35.0% | |
| AGTAAAGAGCAGAATATGCA+AGG | - | chr5.4:16286724-16286743 | None:intergenic | 35.0% | |
| ATTCTATCGTGAAGATAGGA+CGG | + | chr5.4:16285619-16285638 | MS.gene72708:intron | 35.0% | |
| ATTTGGGTAGGTTTGTGATT+TGG | + | chr5.4:16284914-16284933 | MS.gene72708:CDS | 35.0% | |
| GAAAACTAAGGAGGCTATTA+AGG | + | chr5.4:16284663-16284682 | MS.gene72708:CDS | 35.0% | |
| GATTTATGGGTCGTTTGATA+AGG | + | chr5.4:16284966-16284985 | MS.gene72708:CDS | 35.0% | |
| GATTTGAATTGTGATCTTGC+TGG | + | chr5.4:16285498-16285517 | MS.gene72708:intron | 35.0% | |
| GTTAACTTCATGTGTAAGTG+AGG | + | chr5.4:16285774-16285793 | MS.gene72708:intron | 35.0% | |
| TCCACTCATCTAAATACACA+CGG | - | chr5.4:16287080-16287099 | None:intergenic | 35.0% | |
| TTGAGATTACTAATGTGGAG+AGG | + | chr5.4:16284860-16284879 | MS.gene72708:CDS | 35.0% | |
| ! | AGAAAGAAGCATGGAACATA+TGG | - | chr5.4:16287008-16287027 | None:intergenic | 35.0% |
| ! | ATAATCAGAATCTGAGACCA+TGG | - | chr5.4:16287340-16287359 | None:intergenic | 35.0% |
| ! | GATTGTTTATGGTACTGAAG+GGG | + | chr5.4:16284801-16284820 | MS.gene72708:CDS | 35.0% |
| ! | TGATTTGGGTTTGTAGTGAT+TGG | + | chr5.4:16285739-16285758 | MS.gene72708:intron | 35.0% |
| ! | TGGTGAATTCTGATTTGACT+AGG | + | chr5.4:16285031-16285050 | MS.gene72708:CDS | 35.0% |
| ! | TGGTGTTGAGATTACTAATG+TGG | + | chr5.4:16284855-16284874 | MS.gene72708:CDS | 35.0% |
| !! | AAGGCTTTTAGGAATATTCC+TGG | + | chr5.4:16284835-16284854 | MS.gene72708:CDS | 35.0% |
| !! | AGAAAGGGTATGTTTTACCT+AGG | + | chr5.4:16285001-16285020 | MS.gene72708:CDS | 35.0% |
| !! | GAAAGGGTATGTTTTACCTA+GGG | + | chr5.4:16285002-16285021 | MS.gene72708:CDS | 35.0% |
| !! | GTTGATTTGGTATTGTTCCT+AGG | + | chr5.4:16285438-16285457 | MS.gene72708:intron | 35.0% |
| !! | TCTGGAGTTTTTGGAAATGT+TGG | - | chr5.4:16284305-16284324 | None:intergenic | 35.0% |
| !! | TGTTTATACTCCCACTTTTG+GGG | + | chr5.4:16286465-16286484 | MS.gene72708:intron | 35.0% |
| !!! | ATTAAGGTTTTGAAGCAGGT+TGG | + | chr5.4:16284679-16284698 | MS.gene72708:CDS | 35.0% |
| !!! | GAGTGGATGAGTTGATTTTT+TGG | + | chr5.4:16286950-16286969 | MS.gene72708:intron | 35.0% |
| !!! | GTGGATGAGTTGATTTTTTG+GGG | + | chr5.4:16286952-16286971 | MS.gene72708:intron | 35.0% |
| AAACACAGTCAGAAAGAAGC+AGG | - | chr5.4:16287161-16287180 | None:intergenic | 40.0% | |
| AACACAGTCAGAAAGAAGCA+GGG | - | chr5.4:16287160-16287179 | None:intergenic | 40.0% | |
| ACCGTGTGTATTTAGATGAG+TGG | + | chr5.4:16287076-16287095 | MS.gene72708:intron | 40.0% | |
| AGAAAGAAGCAGGGAACATA+TGG | - | chr5.4:16287151-16287170 | None:intergenic | 40.0% | |
| AGCTTCTGCTATTCCTTCAT+TGG | + | chr5.4:16284564-16284583 | MS.gene72708:CDS | 40.0% | |
| AGGCGATATATATCGCGTAA+GGG | + | chr5.4:16284772-16284791 | MS.gene72708:CDS | 40.0% | |
| CAACTTCTCTAAATGGCTAG+GGG | + | chr5.4:16287371-16287390 | MS.gene72708:CDS | 40.0% | |
| CACAATCCAAACCCTAGAAT+CGG | + | chr5.4:16284192-16284211 | MS.gene72708:CDS | 40.0% | |
| CACACAATCAGAAAGAAGCA+TGG | - | chr5.4:16287017-16287036 | None:intergenic | 40.0% | |
| CATCCACTCATCTAAACACA+CGG | - | chr5.4:16286939-16286958 | None:intergenic | 40.0% | |
| GAAAGCTTGGTATAACACCA+TGG | + | chr5.4:16287320-16287339 | MS.gene72708:CDS | 40.0% | |
| GAAGAGAAAGACTGTCTCTA+AGG | + | chr5.4:16285248-16285267 | MS.gene72708:CDS | 40.0% | |
| GAAGCATGGAACATATGGAA+TGG | - | chr5.4:16287003-16287022 | None:intergenic | 40.0% | |
| GACAACTTCTCTAAATGGCT+AGG | + | chr5.4:16287369-16287388 | MS.gene72708:CDS | 40.0% | |
| TAGGCGATATATATCGCGTA+AGG | + | chr5.4:16284771-16284790 | MS.gene72708:CDS | 40.0% | |
| TAGGGTTTGGATTGTGACAA+GGG | - | chr5.4:16284188-16284207 | None:intergenic | 40.0% | |
| TAGTAGTTGATCTCGGAAAG+TGG | - | chr5.4:16286505-16286524 | None:intergenic | 40.0% | |
| TGAAAGGGTTAAGGCTAAGA+AGG | + | chr5.4:16285212-16285231 | MS.gene72708:CDS | 40.0% | |
| TGTTGTGAGGCCAATTAAGA+AGG | + | chr5.4:16285080-16285099 | MS.gene72708:CDS | 40.0% | |
| TTCTATCGTGAAGATAGGAC+GGG | + | chr5.4:16285620-16285639 | MS.gene72708:intron | 40.0% | |
| ! | AAGGGACCGTTGATTGTTTA+TGG | + | chr5.4:16284790-16284809 | MS.gene72708:CDS | 40.0% |
| ! | TGCTTTTGCTGATGCTGAAA+AGG | + | chr5.4:16284702-16284721 | MS.gene72708:CDS | 40.0% |
| ! | TGTTTTACCTAGGGCTAAGA+TGG | + | chr5.4:16285011-16285030 | MS.gene72708:CDS | 40.0% |
| !! | ACATTTCCGATTCTAGGGTT+TGG | - | chr5.4:16284201-16284220 | None:intergenic | 40.0% |
| !! | GTAAGGTTGTCTGGAGTTTT+TGG | - | chr5.4:16284314-16284333 | None:intergenic | 40.0% |
| !!! | AATCTTTTGAAGCTTGCACC+GGG | + | chr5.4:16284886-16284905 | MS.gene72708:CDS | 40.0% |
| !!! | GAATCTTTTGAAGCTTGCAC+CGG | + | chr5.4:16284885-16284904 | MS.gene72708:CDS | 40.0% |
| !!! | GGCTATTAAGGTTTTGAAGC+AGG | + | chr5.4:16284675-16284694 | MS.gene72708:CDS | 40.0% |
| !!! | GGGGAATAATGGATGACTTT+TGG | + | chr5.4:16286971-16286990 | MS.gene72708:intron | 40.0% |
| AAAAGGCCAAGGATAGCCTT+GGG | + | chr5.4:16284719-16284738 | MS.gene72708:CDS | 45.0% | |
| AAGGCTTCGGAGAAGAAGAA+AGG | + | chr5.4:16284985-16285004 | MS.gene72708:CDS | 45.0% | |
| ACCAAACCTCAGCTGAATCA+TGG | + | chr5.4:16284356-16284375 | MS.gene72708:CDS | 45.0% | |
| AGAAGCTTCCTCCTGAAAGA+GGG | - | chr5.4:16287283-16287302 | None:intergenic | 45.0% | |
| AGGCTTCGGAGAAGAAGAAA+GGG | + | chr5.4:16284986-16285005 | MS.gene72708:CDS | 45.0% | |
| AGGGTTTGGATTGTGACAAG+GGG | - | chr5.4:16284187-16284206 | None:intergenic | 45.0% | |
| ATCTCCTTTGGCAGAATCCT+AGG | - | chr5.4:16285458-16285477 | None:intergenic | 45.0% | |
| CAAACCTCAGCTGAATCATG+GGG | + | chr5.4:16284358-16284377 | MS.gene72708:CDS | 45.0% | |
| CAACCGTGTGTTTAGATGAG+TGG | + | chr5.4:16286933-16286952 | MS.gene72708:intron | 45.0% | |
| CATTTCCTCCAGATCCTAGT+CGG | - | chr5.4:16284490-16284509 | None:intergenic | 45.0% | |
| CCAAACCTCAGCTGAATCAT+GGG | + | chr5.4:16284357-16284376 | MS.gene72708:CDS | 45.0% | |
| CCAACAACAAGAGGAAACTC+AGG | - | chr5.4:16284622-16284641 | None:intergenic | 45.0% | |
| CTAGGGTTTGGATTGTGACA+AGG | - | chr5.4:16284189-16284208 | None:intergenic | 45.0% | |
| CTCTTAGCAGTCTTGGCATA+AGG | - | chr5.4:16285171-16285190 | None:intergenic | 45.0% | |
| CTTATGCCAAGACTGCTAAG+AGG | + | chr5.4:16285169-16285188 | MS.gene72708:CDS | 45.0% | |
| GAAGCAGGGAACATATGGAA+TGG | - | chr5.4:16287146-16287165 | None:intergenic | 45.0% | |
| GAATTCACCATCTTAGCCCT+AGG | - | chr5.4:16285021-16285040 | None:intergenic | 45.0% | |
| GGATTCTCATCATGCTCTTG+AGG | + | chr5.4:16286637-16286656 | MS.gene72708:intron | 45.0% | |
| GGTGGACATTTCCGATTCTA+GGG | - | chr5.4:16284206-16284225 | None:intergenic | 45.0% | |
| GTAGAATGTTTGCTCCGACT+AGG | + | chr5.4:16284473-16284492 | MS.gene72708:CDS | 45.0% | |
| TCTAATCCCAAGGCTATCCT+TGG | - | chr5.4:16284728-16284747 | None:intergenic | 45.0% | |
| TCTATCGTGAAGATAGGACG+GGG | + | chr5.4:16285621-16285640 | MS.gene72708:intron | 45.0% | |
| TGGGTCGTTTGATAAGGCTT+CGG | + | chr5.4:16284972-16284991 | MS.gene72708:CDS | 45.0% | |
| TGTGTTCCTTTCCCTCTTTC+AGG | + | chr5.4:16287269-16287288 | MS.gene72708:intron | 45.0% | |
| TGTTCCTAGGATTCTGCCAA+AGG | + | chr5.4:16285451-16285470 | MS.gene72708:intron | 45.0% | |
| ! | AGTGGATTTGATGGCAGCTT+TGG | + | chr5.4:16286847-16286866 | MS.gene72708:intron | 45.0% |
| ! | CCTGAGTTTCCTCTTGTTGT+TGG | + | chr5.4:16284619-16284638 | MS.gene72708:CDS | 45.0% |
| ! | GGCAGCTTTGGTAAATTCCT+GGG | + | chr5.4:16286859-16286878 | MS.gene72708:intron | 45.0% |
| ! | TGGCAGCTTTGGTAAATTCC+TGG | + | chr5.4:16286858-16286877 | MS.gene72708:intron | 45.0% |
| ! | TTTGCTTGCTGAGGCTGAAA+GGG | + | chr5.4:16285197-16285216 | MS.gene72708:CDS | 45.0% |
| ! | TTTGGTAACATGTGTCGTGG+TGG | + | chr5.4:16284451-16284470 | MS.gene72708:CDS | 45.0% |
| !! | GCTTTTGGTAACATGTGTCG+TGG | + | chr5.4:16284448-16284467 | MS.gene72708:CDS | 45.0% |
| !! | TGGAAGTGTGGTTGGTGAAT+CGG | - | chr5.4:16284227-16284246 | None:intergenic | 45.0% |
| AGCCATCCTCTTAGCAGTCT+TGG | - | chr5.4:16285178-16285197 | None:intergenic | 50.0% | |
| AGTACCCCATGATTCAGCTG+AGG | - | chr5.4:16284365-16284384 | None:intergenic | 50.0% | |
| ATTCCTCATCTTCCCCTTCC+CGG | - | chr5.4:16284752-16284771 | None:intergenic | 50.0% | |
| ATTGAAGCGCGCATGACATC+GGG | - | chr5.4:16284253-16284272 | None:intergenic | 50.0% | |
| CAGAAGCTTCCTCCTGAAAG+AGG | - | chr5.4:16287284-16287303 | None:intergenic | 50.0% | |
| CCACGAGCAAGAACCAATGA+AGG | - | chr5.4:16284580-16284599 | None:intergenic | 50.0% | |
| CCCATGATTCAGCTGAGGTT+TGG | - | chr5.4:16284360-16284379 | None:intergenic | 50.0% | |
| CGAAGTTGACGATGTCAGGA+CGG | - | chr5.4:16284276-16284295 | None:intergenic | 50.0% | |
| CGACTAGGATCTGGAGGAAA+TGG | + | chr5.4:16284488-16284507 | MS.gene72708:CDS | 50.0% | |
| CGGGGATCTCAATTGCATGA+AGG | + | chr5.4:16285639-16285658 | MS.gene72708:intron | 50.0% | |
| CGGTGGACATTTCCGATTCT+AGG | - | chr5.4:16284207-16284226 | None:intergenic | 50.0% | |
| CTTCCTCCTGAAAGAGGGAA+AGG | - | chr5.4:16287278-16287297 | None:intergenic | 50.0% | |
| GAAAAGGCCAAGGATAGCCT+TGG | + | chr5.4:16284718-16284737 | MS.gene72708:CDS | 50.0% | |
| GATTGAAGCGCGCATGACAT+CGG | - | chr5.4:16284254-16284273 | None:intergenic | 50.0% | |
| GCAGCATCACCAACAACAAG+AGG | - | chr5.4:16284631-16284650 | None:intergenic | 50.0% | |
| GGAAGGGGAAGATGAGGAAT+AGG | + | chr5.4:16284752-16284771 | MS.gene72708:CDS | 50.0% | |
| GGATCTGGAGGAAATGGCAT+AGG | + | chr5.4:16284494-16284513 | MS.gene72708:CDS | 50.0% | |
| GTTCCTTTCCCTCTTTCAGG+AGG | + | chr5.4:16287272-16287291 | MS.gene72708:intron | 50.0% | |
| TCACGTATTCCTCGTGTTGC+AGG | + | chr5.4:16284397-16284416 | MS.gene72708:CDS | 50.0% | |
| TCAGCTGAATCATGGGGTAC+TGG | + | chr5.4:16284364-16284383 | MS.gene72708:CDS | 50.0% | |
| TCTCGGAAAGTGGAGCATAG+CGG | - | chr5.4:16286495-16286514 | None:intergenic | 50.0% | |
| TGCCAAGACTGCTAAGAGGA+TGG | + | chr5.4:16285173-16285192 | MS.gene72708:CDS | 50.0% | |
| TGCTGAGGCTGAAAGGGTTA+AGG | + | chr5.4:16285203-16285222 | MS.gene72708:CDS | 50.0% | |
| TGCTGATGCTGAAAAGGCCA+AGG | + | chr5.4:16284708-16284727 | MS.gene72708:CDS | 50.0% | |
| TGGACGAAGTTGACGATGTC+AGG | - | chr5.4:16284280-16284299 | None:intergenic | 50.0% | |
| TGGTTCTTGCTCGTGGTCAT+AGG | + | chr5.4:16284584-16284603 | MS.gene72708:CDS | 50.0% | |
| TGTTTGCTCCGACTAGGATC+TGG | + | chr5.4:16284479-16284498 | MS.gene72708:CDS | 50.0% | |
| ! | ATAGCCTTGGGATTAGACCC+GGG | + | chr5.4:16284731-16284750 | MS.gene72708:CDS | 50.0% |
| ! | CGAAGGCGGTTAAGGCTTTT+AGG | + | chr5.4:16284824-16284843 | MS.gene72708:CDS | 50.0% |
| ! | CTTTGCTTGCTGAGGCTGAA+AGG | + | chr5.4:16285196-16285215 | MS.gene72708:CDS | 50.0% |
| ! | GATAGCCTTGGGATTAGACC+CGG | + | chr5.4:16284730-16284749 | MS.gene72708:CDS | 50.0% |
| ! | TTATGGTACTGAAGGGGCGA+AGG | + | chr5.4:16284807-16284826 | MS.gene72708:CDS | 50.0% |
| !! | AAGTGTGGTTGGTGAATCGG+TGG | - | chr5.4:16284224-16284243 | None:intergenic | 50.0% |
| !! | AGGTTTGGTGACCAGCTTTC+CGG | - | chr5.4:16284345-16284364 | None:intergenic | 50.0% |
| !! | ATGAGGTGCAGAGTGTTGTG+AGG | + | chr5.4:16285067-16285086 | MS.gene72708:CDS | 50.0% |
| !! | CCTTCATTGGTTCTTGCTCG+TGG | + | chr5.4:16284577-16284596 | MS.gene72708:CDS | 50.0% |
| !! | GTTGTTGGTGATGCTGCTGA+AGG | + | chr5.4:16284634-16284653 | MS.gene72708:CDS | 50.0% |
| !!! | TTTTGAAGCTTGCACCGGGT+GGG | + | chr5.4:16284890-16284909 | MS.gene72708:CDS | 50.0% |
| AACCTACCCAAATGCCCACC+CGG | - | chr5.4:16284907-16284926 | None:intergenic | 55.0% | |
| AGCGGTGCGGAATAAGACAG+CGG | + | chr5.4:16286069-16286088 | MS.gene72708:intron | 55.0% | |
| AGCTTTCCCTGCAGCCTTGA+TGG | - | chr5.4:16287307-16287326 | None:intergenic | 55.0% | |
| ATAGCGGCTGACCCCAAAAG+TGG | - | chr5.4:16286479-16286498 | None:intergenic | 55.0% | |
| ATTCCTCGTGTTGCAGGTGG+TGG | + | chr5.4:16284403-16284422 | MS.gene72708:CDS | 55.0% | |
| CAAAAGCAGCCTGACCAGCA+CGG | - | chr5.4:16284435-16284454 | None:intergenic | 55.0% | |
| CGTATTCCTCGTGTTGCAGG+TGG | + | chr5.4:16284400-16284419 | MS.gene72708:CDS | 55.0% | |
| CTTATTCCGCACCGCTACGA+CGG | - | chr5.4:16286065-16286084 | None:intergenic | 55.0% | |
| CTTCTGCCATCAAGGCTGCA+GGG | + | chr5.4:16287298-16287317 | MS.gene72708:CDS | 55.0% | |
| CTTGGGATTAGACCCGGGAA+GGG | + | chr5.4:16284736-16284755 | MS.gene72708:CDS | 55.0% | |
| GACATCGGGGATTGGAAGTG+TGG | - | chr5.4:16284239-16284258 | None:intergenic | 55.0% | |
| GCTATAGCGGCGTAGTGAAG+CGG | + | chr5.4:16286103-16286122 | MS.gene72708:intron | 55.0% | |
| GGAGGAAGCTTCTGCCATCA+AGG | + | chr5.4:16287290-16287309 | MS.gene72708:intron | 55.0% | |
| GGTCGCTTCAGCTGCTATAG+CGG | + | chr5.4:16286090-16286109 | MS.gene72708:intron | 55.0% | |
| TAGCGGCTGACCCCAAAAGT+GGG | - | chr5.4:16286478-16286497 | None:intergenic | 55.0% | |
| TCAAGGCTGCAGGGAAAGCT+TGG | + | chr5.4:16287307-16287326 | MS.gene72708:CDS | 55.0% | |
| TTCCTCATCTTCCCCTTCCC+GGG | - | chr5.4:16284751-16284770 | None:intergenic | 55.0% | |
| TTCCTCGTGTTGCAGGTGGT+GGG | + | chr5.4:16284404-16284423 | MS.gene72708:CDS | 55.0% | |
| TTGAAGCGCGCATGACATCG+GGG | - | chr5.4:16284252-16284271 | None:intergenic | 55.0% | |
| TTGCTCCGACTAGGATCTGG+AGG | + | chr5.4:16284482-16284501 | MS.gene72708:CDS | 55.0% | |
| TTGGGATTAGACCCGGGAAG+GGG | + | chr5.4:16284737-16284756 | MS.gene72708:CDS | 55.0% | |
| ! | GAGGATGGCTTTGCTTGCTG+AGG | + | chr5.4:16285188-16285207 | MS.gene72708:CDS | 55.0% |
| ! | TCGGGGATTGGAAGTGTGGT+TGG | - | chr5.4:16284235-16284254 | None:intergenic | 55.0% |
| !!! | CTTTTGAAGCTTGCACCGGG+TGG | + | chr5.4:16284889-16284908 | MS.gene72708:CDS | 55.0% |
| CCTTCCCGGGTCTAATCCCA+AGG | - | chr5.4:16284738-16284757 | None:intergenic | 60.0% | |
| CCTTGGGATTAGACCCGGGA+AGG | + | chr5.4:16284735-16284754 | MS.gene72708:CDS | 60.0% | |
| CGCTACGACGGTTAGCGTAG+CGG | - | chr5.4:16286053-16286072 | None:intergenic | 60.0% | |
| CGCTACGCTAACCGTCGTAG+CGG | + | chr5.4:16286051-16286070 | MS.gene72708:intron | 60.0% | |
| CTTGCACCGGGTGGGCATTT+GGG | + | chr5.4:16284898-16284917 | MS.gene72708:CDS | 60.0% | |
| GACAACCTTACGCCGTCAGC+CGG | + | chr5.4:16284323-16284342 | MS.gene72708:CDS | 60.0% | |
| GCTGACGGCGTAAGGTTGTC+TGG | - | chr5.4:16284323-16284342 | None:intergenic | 60.0% | |
| GCTTCTGCCATCAAGGCTGC+AGG | + | chr5.4:16287297-16287316 | MS.gene72708:CDS | 60.0% | |
| GTGACCAGCTTTCCGGCTGA+CGG | - | chr5.4:16284338-16284357 | None:intergenic | 60.0% | |
| TGAAGGGGCGAAGGCGGTTA+AGG | + | chr5.4:16284816-16284835 | MS.gene72708:CDS | 60.0% | |
| ! | TGGTACTGAAGGGGCGAAGG+CGG | + | chr5.4:16284810-16284829 | MS.gene72708:CDS | 60.0% |
| !! | CGTGCTGGTCAGGCTGCTTT+TGG | + | chr5.4:16284433-16284452 | MS.gene72708:CDS | 60.0% |
| AAGCAGCCTGACCAGCACGG+TGG | - | chr5.4:16284432-16284451 | None:intergenic | 65.0% | |
| AGCAGCCTGACCAGCACGGT+GGG | - | chr5.4:16284431-16284450 | None:intergenic | 65.0% | |
| AGCGGCGTAGTGAAGCGGAG+TGG | + | chr5.4:16286108-16286127 | MS.gene72708:intron | 65.0% | |
| CACCGGGTGGGCATTTGGGT+AGG | + | chr5.4:16284902-16284921 | MS.gene72708:CDS | 65.0% | |
| CGCTAACCGTCGTAGCGGTG+CGG | + | chr5.4:16286056-16286075 | MS.gene72708:intron | 65.0% | |
| GACCCGGGAAGGGGAAGATG+AGG | + | chr5.4:16284746-16284765 | MS.gene72708:CDS | 65.0% | |
| GCGCGCATGACATCGGGGAT+TGG | - | chr5.4:16284247-16284266 | None:intergenic | 65.0% | |
| GCTTGCACCGGGTGGGCATT+TGG | + | chr5.4:16284897-16284916 | MS.gene72708:CDS | 65.0% | |
| GCTTTCCGGCTGACGGCGTA+AGG | - | chr5.4:16284331-16284350 | None:intergenic | 65.0% | |
| GTCCCACCACCTGCAACACG+AGG | - | chr5.4:16284409-16284428 | None:intergenic | 65.0% | |
| TACGCCGTCAGCCGGAAAGC+TGG | + | chr5.4:16284331-16284350 | MS.gene72708:CDS | 65.0% | |
| ! | AAGGGGACGTGCTGCTGCTG+CGG | - | chr5.4:16284170-16284189 | None:intergenic | 65.0% |
| GTTAGCGTAGCGGCGACGCG+TGG | - | chr5.4:16286043-16286062 | None:intergenic | 70.0% | |
| ! | TGGGACCCACCGTGCTGGTC+AGG | + | chr5.4:16284423-16284442 | MS.gene72708:CDS | 70.0% |
| ! | GGGACGTGCTGCTGCTGCGG+CGG | - | chr5.4:16284167-16284186 | None:intergenic | 75.0% |
| !! | GGTGGTGGGACCCACCGTGC+TGG | + | chr5.4:16284418-16284437 | MS.gene72708:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 16284160 | 16287404 | 16284160 | ID=MS.gene72708 |
| chr5.4 | mRNA | 16284160 | 16287404 | 16284160 | ID=MS.gene72708.t1;Parent=MS.gene72708 |
| chr5.4 | exon | 16284160 | 16285269 | 16284160 | ID=MS.gene72708.t1.exon1;Parent=MS.gene72708.t1 |
| chr5.4 | CDS | 16284160 | 16285269 | 16284160 | ID=cds.MS.gene72708.t1;Parent=MS.gene72708.t1 |
| chr5.4 | exon | 16287291 | 16287404 | 16287291 | ID=MS.gene72708.t1.exon2;Parent=MS.gene72708.t1 |
| chr5.4 | CDS | 16287291 | 16287404 | 16287291 | ID=cds.MS.gene72708.t1;Parent=MS.gene72708.t1 |
| Gene Sequence |
| Protein sequence |
