Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86495.t1 | XP_003612449.1 | 98.3 | 406 | 7 | 0 | 2 | 407 | 3 | 408 | 2.30E-217 | 764.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86495.t1 | Q9XF97 | 84.0 | 406 | 65 | 0 | 2 | 407 | 3 | 408 | 9.9e-193 | 674.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86495.t1 | B7FHR0 | 98.3 | 406 | 7 | 0 | 2 | 407 | 3 | 408 | 1.7e-217 | 764.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86495.t1 | MTR_5g025120 | 98.276 | 406 | 7 | 0 | 2 | 407 | 3 | 408 | 0.0 | 814 |
| MS.gene86495.t1 | MTR_1g045410 | 96.049 | 405 | 16 | 0 | 3 | 407 | 2 | 406 | 0.0 | 752 |
| MS.gene86495.t1 | MTR_1g066990 | 93.564 | 404 | 26 | 0 | 4 | 407 | 2 | 405 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86495.t1 | AT3G09630 | 82.469 | 405 | 71 | 0 | 3 | 407 | 2 | 406 | 0.0 | 688 |
| MS.gene86495.t1 | AT3G09630 | 82.222 | 405 | 71 | 1 | 3 | 407 | 2 | 405 | 0.0 | 681 |
| MS.gene86495.t1 | AT5G02870 | 81.327 | 407 | 76 | 0 | 1 | 407 | 1 | 407 | 0.0 | 680 |
| MS.gene86495.t1 | AT5G02870 | 81.081 | 407 | 76 | 1 | 1 | 407 | 1 | 406 | 0.0 | 673 |
Find 139 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAATTGGATTTGATTTA+TGG | 0.088950 | 5.1:+15597301 | MS.gene86495:CDS |
| AAGGGACCGTTGATTGTTTA+TGG | 0.172085 | 5.1:+15597139 | MS.gene86495:CDS |
| GAAAACTAAGGAGGCTATTA+AGG | 0.230890 | 5.1:+15597012 | MS.gene86495:CDS |
| GCTTGCACCGGGTGGGCATT+TGG | 0.242314 | 5.1:+15597246 | MS.gene86495:CDS |
| GTTCCTCATCTTCCCCTTCC+CGG | 0.264935 | 5.1:-15597098 | None:intergenic |
| CGGTGGACATTTCCGATTCT+AGG | 0.271462 | 5.1:-15596553 | None:intergenic |
| CGTGCTGGTCAGGCTGCTTT+TGG | 0.280197 | 5.1:+15596782 | MS.gene86495:CDS |
| CCTGAGTTTCCTCTTGTTGT+TGG | 0.285780 | 5.1:+15596968 | MS.gene86495:CDS |
| AATTTGACAACTTCTCTAAA+TGG | 0.287943 | 5.1:+15599639 | MS.gene86495:CDS |
| AGCTTCTGCTATTCCTTCAT+TGG | 0.305726 | 5.1:+15596913 | MS.gene86495:CDS |
| TCACGTATTCCTCGTGTTGC+AGG | 0.319460 | 5.1:+15596746 | MS.gene86495:CDS |
| AGGTTTGGTGACCAGCTTTC+CGG | 0.324392 | 5.1:-15596691 | None:intergenic |
| CTCTTAACATCCTTCTTAAT+CGG | 0.329533 | 5.1:-15597439 | None:intergenic |
| CTTGCACCGGGTGGGCATTT+GGG | 0.333428 | 5.1:+15597247 | MS.gene86495:CDS |
| AGCTTTCCCTGCAGCCTTGA+TGG | 0.333710 | 5.1:-15599579 | None:intergenic |
| GCTGCTGCTGCGGCGGCCAT+TGG | 0.334418 | 5.1:-15596506 | None:intergenic |
| TGGTTCTTGCTCGTGGTCAT+AGG | 0.345540 | 5.1:+15596933 | MS.gene86495:CDS |
| AGAAATTGGATTTGATTTAT+GGG | 0.363297 | 5.1:+15597302 | MS.gene86495:CDS |
| ACATTTCCGATTCTAGGGTT+TGG | 0.372412 | 5.1:-15596547 | None:intergenic |
| TGGAAGGGTGGTTGGTGAAT+CGG | 0.372987 | 5.1:-15596573 | None:intergenic |
| ATTTGGGTAGGTTTGTGATT+TGG | 0.373636 | 5.1:+15597263 | MS.gene86495:CDS |
| CGAAGGGGCGAAGGCGGTTA+AGG | 0.381946 | 5.1:+15597165 | MS.gene86495:CDS |
| CGACTAGGATCTGGAGGAAA+TGG | 0.383246 | 5.1:+15596837 | MS.gene86495:CDS |
| CCCATGATTCAGCTGAGGTT+TGG | 0.398368 | 5.1:-15596706 | None:intergenic |
| GGAAGGGGAAGATGAGGAAC+AGG | 0.401302 | 5.1:+15597101 | MS.gene86495:CDS |
| CTTTGCTTGCTGAGGCTGAA+AGG | 0.401451 | 5.1:+15597545 | MS.gene86495:CDS |
| TGGACGAAGTTGACGATGTC+AGG | 0.402562 | 5.1:-15596626 | None:intergenic |
| GCTGACGGCGTAAGGTTGTC+TGG | 0.404851 | 5.1:-15596669 | None:intergenic |
| ATTCCTCGTGTTGCAGGTGG+TGG | 0.407586 | 5.1:+15596752 | MS.gene86495:CDS |
| GAAGAGAAAGACTGTCTCTA+AGG | 0.412134 | 5.1:+15597597 | MS.gene86495:CDS |
| TTCCTCATCTTCCCCTTCCC+GGG | 0.419374 | 5.1:-15597097 | None:intergenic |
| TGGGACCCACCGTGCTGGTC+AGG | 0.423632 | 5.1:+15596772 | MS.gene86495:CDS |
| GATTTATGGGACGTTTGATA+AGG | 0.429591 | 5.1:+15597315 | MS.gene86495:CDS |
| TGTTTGCTCCGACTAGGATC+TGG | 0.436823 | 5.1:+15596828 | MS.gene86495:CDS |
| ACCAAACCTCAGCTGAATCA+TGG | 0.447157 | 5.1:+15596705 | MS.gene86495:CDS |
| ATTGAAGCACGCATGACATC+GGG | 0.449044 | 5.1:-15596599 | None:intergenic |
| TGCTGAGGCTGAAAGGGTTA+AGG | 0.459340 | 5.1:+15597552 | MS.gene86495:CDS |
| CTTAACCGCCTTCGCCCCTT+CGG | 0.464630 | 5.1:-15597164 | None:intergenic |
| ACAACTTCTCTAAATGGCTA+GGG | 0.469584 | 5.1:+15599645 | MS.gene86495:CDS |
| TTTGCTTGCTGAGGCTGAAA+GGG | 0.469665 | 5.1:+15597546 | MS.gene86495:CDS |
| AGCCATCCTCTTAGCAGTCT+TGG | 0.471110 | 5.1:-15597524 | None:intergenic |
| GCTTCTGCCATCAAGGCTGC+AGG | 0.471561 | 5.1:+15599572 | MS.gene86495:CDS |
| CCAAACCTCAGCTGAATCAT+GGG | 0.477617 | 5.1:+15596706 | MS.gene86495:CDS |
| CTCTTAGCAGTCTTGGCATA+GGG | 0.477896 | 5.1:-15597517 | None:intergenic |
| CACAATCCAAACCCTAGAAT+CGG | 0.481379 | 5.1:+15596541 | MS.gene86495:CDS |
| TGGGACGTTTGATAAGGCTT+CGG | 0.482712 | 5.1:+15597321 | MS.gene86495:CDS |
| GCTTTCCGGCTGACGGCGTA+AGG | 0.484743 | 5.1:-15596677 | None:intergenic |
| GCACGCATGACATCGGGGAT+TGG | 0.488868 | 5.1:-15596593 | None:intergenic |
| GTGACCAGCTTTCCGGCTGA+CGG | 0.489052 | 5.1:-15596684 | None:intergenic |
| AGAATCTTAATGTTATGCTC+AGG | 0.492457 | 5.1:+15597488 | MS.gene86495:CDS |
| TACGCCGTCAGCCGGAAAGC+TGG | 0.492481 | 5.1:+15596680 | MS.gene86495:CDS |
| CACCGGGTGGGCATTTGGGT+AGG | 0.501033 | 5.1:+15597251 | MS.gene86495:CDS |
| TGAAAGGGTTAAGGCTAAGA+AGG | 0.502198 | 5.1:+15597561 | MS.gene86495:CDS |
| GGTGGACATTTCCGATTCTA+GGG | 0.503679 | 5.1:-15596552 | None:intergenic |
| TGTGTTACCTAGGGCTAAGA+TGG | 0.505310 | 5.1:+15597360 | MS.gene86495:CDS |
| TCAAGGCTGCAGGGAAAGCT+TGG | 0.505941 | 5.1:+15599582 | MS.gene86495:CDS |
| GAAAAGGCCAAGGATAGCCT+TGG | 0.508889 | 5.1:+15597067 | MS.gene86495:CDS |
| GACAACCTTACGCCGTCAGC+CGG | 0.509508 | 5.1:+15596672 | MS.gene86495:CDS |
| GTTGTTGGTGATGCTGCTGA+AGG | 0.512772 | 5.1:+15596983 | MS.gene86495:CDS |
| GTTTGTGATTTGGACTAAGT+CGG | 0.513758 | 5.1:+15597273 | MS.gene86495:CDS |
| GGGACGTGCTGCTGCTGCGG+CGG | 0.515937 | 5.1:-15596513 | None:intergenic |
| GACAACTTCTCTAAATGGCT+AGG | 0.516462 | 5.1:+15599644 | MS.gene86495:CDS |
| GCATGACATCGGGGATTGGA+AGG | 0.518132 | 5.1:-15596589 | None:intergenic |
| CGATTAAGAAGGATGTTAAG+AGG | 0.519292 | 5.1:+15597440 | MS.gene86495:CDS |
| TCGGGGATTGGAAGGGTGGT+TGG | 0.519537 | 5.1:-15596581 | None:intergenic |
| GAGGATGGCTTTGCTTGCTG+AGG | 0.523283 | 5.1:+15597537 | MS.gene86495:CDS |
| GGAGGAAGCTTCTGCCATCA+AGG | 0.523621 | 5.1:+15599565 | MS.gene86495:intron |
| TCTAATCCCAAGGCTATCCT+TGG | 0.524268 | 5.1:-15597074 | None:intergenic |
| AATACGTGAAACAGCACGTC+CGG | 0.525790 | 5.1:-15596732 | None:intergenic |
| TTGGGATTAGACCCGGGAAG+GGG | 0.526474 | 5.1:+15597086 | MS.gene86495:CDS |
| CCTCTTAGCAGTCTTGGCAT+AGG | 0.528678 | 5.1:-15597518 | None:intergenic |
| AGAAAGGGTATGTGTTACCT+AGG | 0.534239 | 5.1:+15597350 | MS.gene86495:CDS |
| TGTTGTGAGGCCGATTAAGA+AGG | 0.535007 | 5.1:+15597429 | MS.gene86495:CDS |
| CCTTCATTGGTTCTTGCTCG+TGG | 0.536411 | 5.1:+15596926 | MS.gene86495:CDS |
| ATAACATTAAGATTCTTAAG+TGG | 0.536775 | 5.1:-15597481 | None:intergenic |
| TGCTGATGCTGAAAAGGCCA+AGG | 0.537379 | 5.1:+15597057 | MS.gene86495:CDS |
| AAAAGGCCAAGGATAGCCTT+GGG | 0.538830 | 5.1:+15597068 | MS.gene86495:CDS |
| TGGTGAATTCTGATTTGACT+AGG | 0.539110 | 5.1:+15597380 | MS.gene86495:CDS |
| AAGGCTTCGGAGAAGAAGAA+AGG | 0.545763 | 5.1:+15597334 | MS.gene86495:CDS |
| TTGATTGTTTATGGTACCGA+AGG | 0.548502 | 5.1:+15597148 | MS.gene86495:CDS |
| GGTGGTGGGACCCACCGTGC+TGG | 0.549222 | 5.1:+15596767 | MS.gene86495:CDS |
| AACCTACCCAAATGCCCACC+CGG | 0.552263 | 5.1:-15597253 | None:intergenic |
| AGCAGCCTGACCAGCACGGT+GGG | 0.552373 | 5.1:-15596777 | None:intergenic |
| GACATCGGGGATTGGAAGGG+TGG | 0.554910 | 5.1:-15596585 | None:intergenic |
| CCTATGCCAAGACTGCTAAG+AGG | 0.555398 | 5.1:+15597518 | MS.gene86495:CDS |
| CCTTGGGATTAGACCCGGGA+AGG | 0.558086 | 5.1:+15597084 | MS.gene86495:CDS |
| TGATTGTTTATGGTACCGAA+GGG | 0.561790 | 5.1:+15597149 | MS.gene86495:CDS |
| GATTGAAGCACGCATGACAT+CGG | 0.563386 | 5.1:-15596600 | None:intergenic |
| TTATGGTACCGAAGGGGCGA+AGG | 0.567293 | 5.1:+15597156 | MS.gene86495:CDS |
| GATAGCCTTGGGATTAGACC+CGG | 0.567327 | 5.1:+15597079 | MS.gene86495:CDS |
| CTTGGGATTAGACCCGGGAA+GGG | 0.569338 | 5.1:+15597085 | MS.gene86495:CDS |
| GAATTCACCATCTTAGCCCT+AGG | 0.569796 | 5.1:-15597367 | None:intergenic |
| TTCCTCGTGTTGCAGGTGGT+GGG | 0.571891 | 5.1:+15596753 | MS.gene86495:CDS |
| CTAGGGTTTGGATTGTGACG+AGG | 0.576558 | 5.1:-15596535 | None:intergenic |
| TCAGCTGAATCATGGGGTAC+CGG | 0.577134 | 5.1:+15596713 | MS.gene86495:CDS |
| CGAAGTTGACGATGTCAGGA+CGG | 0.577332 | 5.1:-15596622 | None:intergenic |
| CGTATTCCTCGTGTTGCAGG+TGG | 0.577884 | 5.1:+15596749 | MS.gene86495:CDS |
| TGAAGGAGTAGAGAAAACTA+AGG | 0.578428 | 5.1:+15597000 | MS.gene86495:CDS |
| CCTTCCCGGGTCTAATCCCA+AGG | 0.579401 | 5.1:-15597084 | None:intergenic |
| CCACGAGCAAGAACCAATGA+AGG | 0.582084 | 5.1:-15596926 | None:intergenic |
| ATAATCAGAATCTGAGACCA+TGG | 0.582620 | 5.1:-15599612 | None:intergenic |
| GCAGCATCACCAACAACAAG+AGG | 0.587525 | 5.1:-15596977 | None:intergenic |
| TAGGGTTTGGATTGTGACGA+GGG | 0.587614 | 5.1:-15596534 | None:intergenic |
| TGCCAAGACTGCTAAGAGGA+TGG | 0.590715 | 5.1:+15597522 | MS.gene86495:CDS |
| CAACTTCTCTAAATGGCTAG+GGG | 0.592153 | 5.1:+15599646 | MS.gene86495:CDS |
| CATGACATCGGGGATTGGAA+GGG | 0.594076 | 5.1:-15596588 | None:intergenic |
| CAGGCGATATATATCGCGAA+AGG | 0.594349 | 5.1:+15597120 | MS.gene86495:CDS |
| GAGGGGACGTGCTGCTGCTG+CGG | 0.594798 | 5.1:-15596516 | None:intergenic |
| GACCCGGGAAGGGGAAGATG+AGG | 0.595589 | 5.1:+15597095 | MS.gene86495:CDS |
| GGATCTGGAGGAAATGGCAT+AGG | 0.595709 | 5.1:+15596843 | MS.gene86495:CDS |
| CTTCTGCCATCAAGGCTGCA+GGG | 0.598308 | 5.1:+15599573 | MS.gene86495:CDS |
| TGGTGTTGAGATTACTAATG+TGG | 0.599446 | 5.1:+15597204 | MS.gene86495:CDS |
| GTAGAATGTTTGCTCCGACT+AGG | 0.599712 | 5.1:+15596822 | MS.gene86495:CDS |
| AGGCTTCGGAGAAGAAGAAA+GGG | 0.601116 | 5.1:+15597335 | MS.gene86495:CDS |
| AAGGGTGGTTGGTGAATCGG+TGG | 0.603978 | 5.1:-15596570 | None:intergenic |
| AGGCGATATATATCGCGAAA+GGG | 0.605240 | 5.1:+15597121 | MS.gene86495:CDS |
| CCAACAACAAGAGGAAACTC+AGG | 0.606988 | 5.1:-15596968 | None:intergenic |
| CATTTCCTCCAGATCCTAGT+CGG | 0.610904 | 5.1:-15596836 | None:intergenic |
| GAAAGGGTATGTGTTACCTA+GGG | 0.612369 | 5.1:+15597351 | MS.gene86495:CDS |
| AGGAGTAGAGAAAACTAAGG+AGG | 0.635842 | 5.1:+15597003 | MS.gene86495:CDS |
| TCGGTACCATAAACAATCAA+CGG | 0.638403 | 5.1:-15597145 | None:intergenic |
| TGGTACCGAAGGGGCGAAGG+CGG | 0.639215 | 5.1:+15597159 | MS.gene86495:CDS |
| TAGGATTATTAATAGTGATG+AGG | 0.640452 | 5.1:+15597399 | MS.gene86495:CDS |
| GATTAAGAAGGATGTTAAGA+GGG | 0.643145 | 5.1:+15597441 | MS.gene86495:CDS |
| GTCCCACCACCTGCAACACG+AGG | 0.646810 | 5.1:-15596755 | None:intergenic |
| ATAGCCTTGGGATTAGACCC+GGG | 0.646880 | 5.1:+15597080 | MS.gene86495:CDS |
| TTGCTCCGACTAGGATCTGG+AGG | 0.651327 | 5.1:+15596831 | MS.gene86495:CDS |
| TTGAGATTACTAATGTGGAG+AGG | 0.654222 | 5.1:+15597209 | MS.gene86495:CDS |
| GGTACCCCATGATTCAGCTG+AGG | 0.655914 | 5.1:-15596711 | None:intergenic |
| CAAAAGCAGCCTGACCAGCA+CGG | 0.671346 | 5.1:-15596781 | None:intergenic |
| ACATTAGTAATCTCAACACC+AGG | 0.671385 | 5.1:-15597202 | None:intergenic |
| GATTGTTTATGGTACCGAAG+GGG | 0.679160 | 5.1:+15597150 | MS.gene86495:CDS |
| AGGGTTTGGATTGTGACGAG+GGG | 0.685612 | 5.1:-15596533 | None:intergenic |
| TTTGGTAACATGTGTCGTGG+TGG | 0.688796 | 5.1:+15596800 | MS.gene86495:CDS |
| AAGCAGCCTGACCAGCACGG+TGG | 0.701528 | 5.1:-15596778 | None:intergenic |
| ATGAGGTGCAGAGTGTTGTG+AGG | 0.702312 | 5.1:+15597416 | MS.gene86495:CDS |
| GAAAGCTTGGTATAACACCA+TGG | 0.705586 | 5.1:+15599595 | MS.gene86495:CDS |
| TTGAAGCACGCATGACATCG+GGG | 0.725773 | 5.1:-15596598 | None:intergenic |
| CAAACCTCAGCTGAATCATG+GGG | 0.734702 | 5.1:+15596707 | MS.gene86495:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTAATAGTTTTTGATT+TGG | + | chr5.1:15598072-15598091 | MS.gene86495:intron | 10.0% |
| !!! | TAATTAATAGTTTTTGATTT+GGG | + | chr5.1:15598073-15598092 | MS.gene86495:intron | 10.0% |
| !!! | TACAAAATGTTTTTAAAATA+TGG | - | chr5.1:15598534-15598553 | None:intergenic | 10.0% |
| !! | CATACTAAATTATTAAAGTT+TGG | - | chr5.1:15598016-15598035 | None:intergenic | 15.0% |
| !!! | AACTTAGTTTTATTTTAATC+TGG | - | chr5.1:15598937-15598956 | None:intergenic | 15.0% |
| !!! | AGTTTAAGACAATAAATAAA+TGG | - | chr5.1:15599509-15599528 | None:intergenic | 15.0% |
| !!! | ATTTAAATTTGAGATTGTAA+TGG | - | chr5.1:15598895-15598914 | None:intergenic | 15.0% |
| !!! | CAAATTTCTAAATTGATTTA+GGG | + | chr5.1:15598561-15598580 | MS.gene86495:intron | 15.0% |
| !!! | CTACTATTTTATTTAACAAT+TGG | + | chr5.1:15599054-15599073 | MS.gene86495:intron | 15.0% |
| !!! | TCTTTTTTTCTTTTGTTTTA+CGG | + | chr5.1:15598648-15598667 | MS.gene86495:intron | 15.0% |
| !!! | TTTTTAAAATATGGTCAATT+TGG | - | chr5.1:15598525-15598544 | None:intergenic | 15.0% |
| !! | ATAACATTAAGATTCTTAAG+TGG | - | chr5.1:15597484-15597503 | None:intergenic | 20.0% |
| !! | CCTAAATCAATTTAGAAATT+TGG | - | chr5.1:15598563-15598582 | None:intergenic | 20.0% |
| !! | GTAAAACAAAAGAAAAAAAG+AGG | - | chr5.1:15598649-15598668 | None:intergenic | 20.0% |
| !! | TCTTGCATGATAAATAATAA+GGG | - | chr5.1:15599090-15599109 | None:intergenic | 20.0% |
| !! | TTAGATTTAGTGCTTTAATT+AGG | + | chr5.1:15597891-15597910 | MS.gene86495:intron | 20.0% |
| !! | TTCTTGCATGATAAATAATA+AGG | - | chr5.1:15599091-15599110 | None:intergenic | 20.0% |
| !! | TTTCAACTAAAATCAAATAG+CGG | - | chr5.1:15598498-15598517 | None:intergenic | 20.0% |
| !!! | AATCTGGTTTGTATAATTTA+GGG | - | chr5.1:15598921-15598940 | None:intergenic | 20.0% |
| !!! | ACAATCTCAACTTTTATATA+AGG | - | chr5.1:15597930-15597949 | None:intergenic | 20.0% |
| !!! | AGAAATTGGATTTGATTTAT+GGG | + | chr5.1:15597302-15597321 | MS.gene86495:CDS | 20.0% |
| !!! | ATAATTCATAGCTTTTGATT+TGG | + | chr5.1:15598220-15598239 | MS.gene86495:intron | 20.0% |
| !!! | ATTAAAGCACTAAATCTAAA+TGG | - | chr5.1:15597890-15597909 | None:intergenic | 20.0% |
| !!! | CCAAATTTCTAAATTGATTT+AGG | + | chr5.1:15598560-15598579 | MS.gene86495:intron | 20.0% |
| !!! | TAATCTGGTTTGTATAATTT+AGG | - | chr5.1:15598922-15598941 | None:intergenic | 20.0% |
| !!! | TAATTCATAGCTTTTGATTT+GGG | + | chr5.1:15598221-15598240 | MS.gene86495:intron | 20.0% |
| !!! | TTGATCATTTTATGTTGATT+TGG | + | chr5.1:15597774-15597793 | MS.gene86495:intron | 20.0% |
| ! | AATTTGACAACTTCTCTAAA+TGG | + | chr5.1:15599639-15599658 | MS.gene86495:CDS | 25.0% |
| ! | ATAAAATAGTAGAGTAAACC+AGG | - | chr5.1:15599046-15599065 | None:intergenic | 25.0% |
| ! | CATCTTAAGTTATCAAAACT+TGG | + | chr5.1:15598957-15598976 | MS.gene86495:intron | 25.0% |
| ! | TAGGATTATTAATAGTGATG+AGG | + | chr5.1:15597399-15597418 | MS.gene86495:CDS | 25.0% |
| ! | TTAAGACAATATAAGTGCAA+AGG | - | chr5.1:15598149-15598168 | None:intergenic | 25.0% |
| !! | GAGAAATTGGATTTGATTTA+TGG | + | chr5.1:15597301-15597320 | MS.gene86495:CDS | 25.0% |
| !!! | AAATTGATTTAGGGCATTTT+AGG | + | chr5.1:15598570-15598589 | MS.gene86495:intron | 25.0% |
| !!! | AAGTATTTTTCAGTTGTAAG+TGG | + | chr5.1:15599110-15599129 | MS.gene86495:intron | 25.0% |
| !!! | AATTGATTTAGGGCATTTTA+GGG | + | chr5.1:15598571-15598590 | MS.gene86495:intron | 25.0% |
| !!! | GTTCTCTATCTTTTGTTTTT+TGG | + | chr5.1:15598701-15598720 | MS.gene86495:intron | 25.0% |
| !!! | GTTTGTTTTTTGCAGAATAA+TGG | + | chr5.1:15599378-15599397 | MS.gene86495:intron | 25.0% |
| AATTAATAACTGCAATTCCC+AGG | - | chr5.1:15599160-15599179 | None:intergenic | 30.0% | |
| ACCATACAACAAAGTCTATT+TGG | - | chr5.1:15598606-15598625 | None:intergenic | 30.0% | |
| AGAATCTTAATGTTATGCTC+AGG | + | chr5.1:15597488-15597507 | MS.gene86495:CDS | 30.0% | |
| CTCTTAACATCCTTCTTAAT+CGG | - | chr5.1:15597442-15597461 | None:intergenic | 30.0% | |
| GATTAAGAAGGATGTTAAGA+GGG | + | chr5.1:15597441-15597460 | MS.gene86495:CDS | 30.0% | |
| GTAATCATAGTAGTCAATAG+TGG | + | chr5.1:15598365-15598384 | MS.gene86495:intron | 30.0% | |
| TTAACTTCATGTGTAAGTGA+GGG | + | chr5.1:15598123-15598142 | MS.gene86495:intron | 30.0% | |
| TTTGATTCTATCGTGAAGAA+AGG | + | chr5.1:15597963-15597982 | MS.gene86495:intron | 30.0% | |
| ! | ACCAAATAGACTTTGTTGTA+TGG | + | chr5.1:15598602-15598621 | MS.gene86495:intron | 30.0% |
| ! | TTTGTTTATACTCCCACTTT+TGG | + | chr5.1:15598814-15598833 | MS.gene86495:intron | 30.0% |
| !! | AGTTTTTGGAAATGTTGGAA+TGG | - | chr5.1:15596649-15596668 | None:intergenic | 30.0% |
| !! | TTGTTTATACTCCCACTTTT+GGG | + | chr5.1:15598815-15598834 | MS.gene86495:intron | 30.0% |
| !!! | AGTGGATGAGTTGATTTTTT+GGG | + | chr5.1:15599232-15599251 | MS.gene86495:intron | 30.0% |
| !!! | GCAGAATAATGGATGAATTT+TGG | + | chr5.1:15599389-15599408 | MS.gene86495:intron | 30.0% |
| !!! | GTTGATTTTTTGGGGAATAA+TGG | + | chr5.1:15599241-15599260 | MS.gene86495:intron | 30.0% |
| AAATCAAATAGCGGCTAAAG+CGG | - | chr5.1:15598489-15598508 | None:intergenic | 35.0% | |
| AACACAATCAGAAAGAAGCA+TGG | - | chr5.1:15599298-15599317 | None:intergenic | 35.0% | |
| ACAACTTCTCTAAATGGCTA+GGG | + | chr5.1:15599645-15599664 | MS.gene86495:CDS | 35.0% | |
| ACACGGTTGAATGTCTAAAT+TGG | - | chr5.1:15599338-15599357 | None:intergenic | 35.0% | |
| ACATTAGTAATCTCAACACC+AGG | - | chr5.1:15597205-15597224 | None:intergenic | 35.0% | |
| ACATTCATAGTAGTCGATCT+CGG | - | chr5.1:15598853-15598872 | None:intergenic | 35.0% | |
| ACTAGAACATACATCTCCTT+TGG | - | chr5.1:15597819-15597838 | None:intergenic | 35.0% | |
| AGTAAAGAGCAGAATATGCA+AGG | - | chr5.1:15599005-15599024 | None:intergenic | 35.0% | |
| ATTCTATCGTGAAGAAAGGA+CGG | + | chr5.1:15597967-15597986 | MS.gene86495:intron | 35.0% | |
| ATTTGGGTAGGTTTGTGATT+TGG | + | chr5.1:15597263-15597282 | MS.gene86495:CDS | 35.0% | |
| CATTCAAAAATCAAGCACAG+TGG | - | chr5.1:15597637-15597656 | None:intergenic | 35.0% | |
| CGATTAAGAAGGATGTTAAG+AGG | + | chr5.1:15597440-15597459 | MS.gene86495:CDS | 35.0% | |
| GAAAACTAAGGAGGCTATTA+AGG | + | chr5.1:15597012-15597031 | MS.gene86495:CDS | 35.0% | |
| GATTTATGGGACGTTTGATA+AGG | + | chr5.1:15597315-15597334 | MS.gene86495:CDS | 35.0% | |
| GATTTGAATTGTGATCTTGC+TGG | + | chr5.1:15597847-15597866 | MS.gene86495:intron | 35.0% | |
| GTTAACTTCATGTGTAAGTG+AGG | + | chr5.1:15598122-15598141 | MS.gene86495:intron | 35.0% | |
| TAAATAGTGACTGATCTTCC+TGG | + | chr5.1:15599025-15599044 | MS.gene86495:intron | 35.0% | |
| TCCACTCATCTAAATACACA+CGG | - | chr5.1:15599355-15599374 | None:intergenic | 35.0% | |
| TCGGTACCATAAACAATCAA+CGG | - | chr5.1:15597148-15597167 | None:intergenic | 35.0% | |
| TGAAGGAGTAGAGAAAACTA+AGG | + | chr5.1:15597000-15597019 | MS.gene86495:CDS | 35.0% | |
| TTGAGATTACTAATGTGGAG+AGG | + | chr5.1:15597209-15597228 | MS.gene86495:CDS | 35.0% | |
| ! | AGAAAGAAGCATGGAACATA+TGG | - | chr5.1:15599289-15599308 | None:intergenic | 35.0% |
| ! | ATAATCAGAATCTGAGACCA+TGG | - | chr5.1:15599615-15599634 | None:intergenic | 35.0% |
| ! | GTTTGTGATTTGGACTAAGT+CGG | + | chr5.1:15597273-15597292 | MS.gene86495:CDS | 35.0% |
| ! | TCAGTTGTAAGTGGATTTGA+TGG | + | chr5.1:15599119-15599138 | MS.gene86495:intron | 35.0% |
| ! | TGATTGTTTATGGTACCGAA+GGG | + | chr5.1:15597149-15597168 | MS.gene86495:CDS | 35.0% |
| ! | TGATTTGGGTTTGTAGTGAT+TGG | + | chr5.1:15598087-15598106 | MS.gene86495:intron | 35.0% |
| ! | TGGTGAATTCTGATTTGACT+AGG | + | chr5.1:15597380-15597399 | MS.gene86495:CDS | 35.0% |
| ! | TGGTGTTGAGATTACTAATG+TGG | + | chr5.1:15597204-15597223 | MS.gene86495:CDS | 35.0% |
| ! | TTGATTGTTTATGGTACCGA+AGG | + | chr5.1:15597148-15597167 | MS.gene86495:CDS | 35.0% |
| !! | AAGGCTTTTAGGAATATTCC+TGG | + | chr5.1:15597184-15597203 | MS.gene86495:CDS | 35.0% |
| !! | GTTGATTTGGTATTGTTCCT+AGG | + | chr5.1:15597787-15597806 | MS.gene86495:intron | 35.0% |
| !! | TAAGTCGGCTTTTGAGAAAT+TGG | + | chr5.1:15597288-15597307 | MS.gene86495:CDS | 35.0% |
| !! | TCTGGAGTTTTTGGAAATGT+TGG | - | chr5.1:15596654-15596673 | None:intergenic | 35.0% |
| !! | TGTTTATACTCCCACTTTTG+GGG | + | chr5.1:15598816-15598835 | MS.gene86495:intron | 35.0% |
| !!! | ATTAAGGTTTTGAAGCAGGT+TGG | + | chr5.1:15597028-15597047 | MS.gene86495:CDS | 35.0% |
| !!! | GAGTGGATGAGTTGATTTTT+TGG | + | chr5.1:15599231-15599250 | MS.gene86495:intron | 35.0% |
| !!! | GTGGATGAGTTGATTTTTTG+GGG | + | chr5.1:15599233-15599252 | MS.gene86495:intron | 35.0% |
| AAACACAGTCAGAAAGAAGC+AGG | - | chr5.1:15599436-15599455 | None:intergenic | 40.0% | |
| AACACAGTCAGAAAGAAGCA+GGG | - | chr5.1:15599435-15599454 | None:intergenic | 40.0% | |
| ACCGTGTGTATTTAGATGAG+TGG | + | chr5.1:15599351-15599370 | MS.gene86495:intron | 40.0% | |
| AGAAAGAAGCAGGGAACATA+TGG | - | chr5.1:15599426-15599445 | None:intergenic | 40.0% | |
| AGCTTCTGCTATTCCTTCAT+TGG | + | chr5.1:15596913-15596932 | MS.gene86495:CDS | 40.0% | |
| AGGAGTAGAGAAAACTAAGG+AGG | + | chr5.1:15597003-15597022 | MS.gene86495:CDS | 40.0% | |
| AGGCGATATATATCGCGAAA+GGG | + | chr5.1:15597121-15597140 | MS.gene86495:CDS | 40.0% | |
| CAACTTCTCTAAATGGCTAG+GGG | + | chr5.1:15599646-15599665 | MS.gene86495:CDS | 40.0% | |
| CACAATCCAAACCCTAGAAT+CGG | + | chr5.1:15596541-15596560 | MS.gene86495:CDS | 40.0% | |
| CATCCACTCATCTAAACACA+CGG | - | chr5.1:15599220-15599239 | None:intergenic | 40.0% | |
| GAAAGCTTGGTATAACACCA+TGG | + | chr5.1:15599595-15599614 | MS.gene86495:CDS | 40.0% | |
| GAAGAGAAAGACTGTCTCTA+AGG | + | chr5.1:15597597-15597616 | MS.gene86495:CDS | 40.0% | |
| GAAGCATGGAACATATGGAA+CGG | - | chr5.1:15599284-15599303 | None:intergenic | 40.0% | |
| GACAACTTCTCTAAATGGCT+AGG | + | chr5.1:15599644-15599663 | MS.gene86495:CDS | 40.0% | |
| TGAAAGGGTTAAGGCTAAGA+AGG | + | chr5.1:15597561-15597580 | MS.gene86495:CDS | 40.0% | |
| TTCTATCGTGAAGAAAGGAC+GGG | + | chr5.1:15597968-15597987 | MS.gene86495:intron | 40.0% | |
| ! | AAGGGACCGTTGATTGTTTA+TGG | + | chr5.1:15597139-15597158 | MS.gene86495:CDS | 40.0% |
| ! | AGAAAGGGTATGTGTTACCT+AGG | + | chr5.1:15597350-15597369 | MS.gene86495:CDS | 40.0% |
| ! | GAAAGGGTATGTGTTACCTA+GGG | + | chr5.1:15597351-15597370 | MS.gene86495:CDS | 40.0% |
| ! | GATTGTTTATGGTACCGAAG+GGG | + | chr5.1:15597150-15597169 | MS.gene86495:CDS | 40.0% |
| ! | TGCTTTTGCTGATGCTGAAA+AGG | + | chr5.1:15597051-15597070 | MS.gene86495:CDS | 40.0% |
| !! | ACATTTCCGATTCTAGGGTT+TGG | - | chr5.1:15596550-15596569 | None:intergenic | 40.0% |
| !! | GTAAGGTTGTCTGGAGTTTT+TGG | - | chr5.1:15596663-15596682 | None:intergenic | 40.0% |
| !!! | AATCTTTTGAAGCTTGCACC+GGG | + | chr5.1:15597235-15597254 | MS.gene86495:CDS | 40.0% |
| !!! | GAATCTTTTGAAGCTTGCAC+CGG | + | chr5.1:15597234-15597253 | MS.gene86495:CDS | 40.0% |
| !!! | GGCTATTAAGGTTTTGAAGC+AGG | + | chr5.1:15597024-15597043 | MS.gene86495:CDS | 40.0% |
| !!! | GGGGAATAATGGATGACTTT+TGG | + | chr5.1:15599252-15599271 | MS.gene86495:intron | 40.0% |
| AAAAGGCCAAGGATAGCCTT+GGG | + | chr5.1:15597068-15597087 | MS.gene86495:CDS | 45.0% | |
| AAGGCTTCGGAGAAGAAGAA+AGG | + | chr5.1:15597334-15597353 | MS.gene86495:CDS | 45.0% | |
| AATACGTGAAACAGCACGTC+CGG | - | chr5.1:15596735-15596754 | None:intergenic | 45.0% | |
| ACCAAACCTCAGCTGAATCA+TGG | + | chr5.1:15596705-15596724 | MS.gene86495:CDS | 45.0% | |
| AGAAGCTTCCTCCTGAAAGA+GGG | - | chr5.1:15599558-15599577 | None:intergenic | 45.0% | |
| AGGCTTCGGAGAAGAAGAAA+GGG | + | chr5.1:15597335-15597354 | MS.gene86495:CDS | 45.0% | |
| ATCTCCTTTGGCAGAATCCT+AGG | - | chr5.1:15597807-15597826 | None:intergenic | 45.0% | |
| ATTGAAGCACGCATGACATC+GGG | - | chr5.1:15596602-15596621 | None:intergenic | 45.0% | |
| CAAACCTCAGCTGAATCATG+GGG | + | chr5.1:15596707-15596726 | MS.gene86495:CDS | 45.0% | |
| CAACCGTGTGTTTAGATGAG+TGG | + | chr5.1:15599214-15599233 | MS.gene86495:intron | 45.0% | |
| CAGGCGATATATATCGCGAA+AGG | + | chr5.1:15597120-15597139 | MS.gene86495:CDS | 45.0% | |
| CATTTCCTCCAGATCCTAGT+CGG | - | chr5.1:15596839-15596858 | None:intergenic | 45.0% | |
| CCAAACCTCAGCTGAATCAT+GGG | + | chr5.1:15596706-15596725 | MS.gene86495:CDS | 45.0% | |
| CCAACAACAAGAGGAAACTC+AGG | - | chr5.1:15596971-15596990 | None:intergenic | 45.0% | |
| CTCTTAGCAGTCTTGGCATA+GGG | - | chr5.1:15597520-15597539 | None:intergenic | 45.0% | |
| GAAGCAGGGAACATATGGAA+TGG | - | chr5.1:15599421-15599440 | None:intergenic | 45.0% | |
| GAATTCACCATCTTAGCCCT+AGG | - | chr5.1:15597370-15597389 | None:intergenic | 45.0% | |
| GATTGAAGCACGCATGACAT+CGG | - | chr5.1:15596603-15596622 | None:intergenic | 45.0% | |
| GGTGGACATTTCCGATTCTA+GGG | - | chr5.1:15596555-15596574 | None:intergenic | 45.0% | |
| GTAGAATGTTTGCTCCGACT+AGG | + | chr5.1:15596822-15596841 | MS.gene86495:CDS | 45.0% | |
| TAGGGTTTGGATTGTGACGA+GGG | - | chr5.1:15596537-15596556 | None:intergenic | 45.0% | |
| TAGTAGTCGATCTCGGAAAG+CGG | - | chr5.1:15598846-15598865 | None:intergenic | 45.0% | |
| TCTAATCCCAAGGCTATCCT+TGG | - | chr5.1:15597077-15597096 | None:intergenic | 45.0% | |
| TCTATCGTGAAGAAAGGACG+GGG | + | chr5.1:15597969-15597988 | MS.gene86495:intron | 45.0% | |
| TGGGACGTTTGATAAGGCTT+CGG | + | chr5.1:15597321-15597340 | MS.gene86495:CDS | 45.0% | |
| TGTGTTACCTAGGGCTAAGA+TGG | + | chr5.1:15597360-15597379 | MS.gene86495:CDS | 45.0% | |
| TGTGTTCCTTTCCCTCTTTC+AGG | + | chr5.1:15599544-15599563 | MS.gene86495:intron | 45.0% | |
| TGTTCCTAGGATTCTGCCAA+AGG | + | chr5.1:15597800-15597819 | MS.gene86495:intron | 45.0% | |
| TGTTGTGAGGCCGATTAAGA+AGG | + | chr5.1:15597429-15597448 | MS.gene86495:CDS | 45.0% | |
| ! | AGTGGATTTGATGGCAGCTT+TGG | + | chr5.1:15599128-15599147 | MS.gene86495:intron | 45.0% |
| ! | CCTGAGTTTCCTCTTGTTGT+TGG | + | chr5.1:15596968-15596987 | MS.gene86495:CDS | 45.0% |
| ! | GGCAGCTTTGGTAAATTCCT+GGG | + | chr5.1:15599140-15599159 | MS.gene86495:intron | 45.0% |
| ! | TGGCAGCTTTGGTAAATTCC+TGG | + | chr5.1:15599139-15599158 | MS.gene86495:intron | 45.0% |
| ! | TTTGCTTGCTGAGGCTGAAA+GGG | + | chr5.1:15597546-15597565 | MS.gene86495:CDS | 45.0% |
| ! | TTTGGTAACATGTGTCGTGG+TGG | + | chr5.1:15596800-15596819 | MS.gene86495:CDS | 45.0% |
| !! | GCTTTTGGTAACATGTGTCG+TGG | + | chr5.1:15596797-15596816 | MS.gene86495:CDS | 45.0% |
| AGCCATCCTCTTAGCAGTCT+TGG | - | chr5.1:15597527-15597546 | None:intergenic | 50.0% | |
| AGGGTTTGGATTGTGACGAG+GGG | - | chr5.1:15596536-15596555 | None:intergenic | 50.0% | |
| CAGAAGCTTCCTCCTGAAAG+AGG | - | chr5.1:15599559-15599578 | None:intergenic | 50.0% | |
| CATGACATCGGGGATTGGAA+GGG | - | chr5.1:15596591-15596610 | None:intergenic | 50.0% | |
| CCACGAGCAAGAACCAATGA+AGG | - | chr5.1:15596929-15596948 | None:intergenic | 50.0% | |
| CCCATGATTCAGCTGAGGTT+TGG | - | chr5.1:15596709-15596728 | None:intergenic | 50.0% | |
| CCTATGCCAAGACTGCTAAG+AGG | + | chr5.1:15597518-15597537 | MS.gene86495:CDS | 50.0% | |
| CCTCTTAGCAGTCTTGGCAT+AGG | - | chr5.1:15597521-15597540 | None:intergenic | 50.0% | |
| CGAAGTTGACGATGTCAGGA+CGG | - | chr5.1:15596625-15596644 | None:intergenic | 50.0% | |
| CGACTAGGATCTGGAGGAAA+TGG | + | chr5.1:15596837-15596856 | MS.gene86495:CDS | 50.0% | |
| CGGGGATCTCAATTGCATGA+AGG | + | chr5.1:15597987-15598006 | MS.gene86495:intron | 50.0% | |
| CGGTGGACATTTCCGATTCT+AGG | - | chr5.1:15596556-15596575 | None:intergenic | 50.0% | |
| CTAGGGTTTGGATTGTGACG+AGG | - | chr5.1:15596538-15596557 | None:intergenic | 50.0% | |
| CTTCCTCCTGAAAGAGGGAA+AGG | - | chr5.1:15599553-15599572 | None:intergenic | 50.0% | |
| GAAAAGGCCAAGGATAGCCT+TGG | + | chr5.1:15597067-15597086 | MS.gene86495:CDS | 50.0% | |
| GCAGCATCACCAACAACAAG+AGG | - | chr5.1:15596980-15596999 | None:intergenic | 50.0% | |
| GGATCTGGAGGAAATGGCAT+AGG | + | chr5.1:15596843-15596862 | MS.gene86495:CDS | 50.0% | |
| GTTCCTTTCCCTCTTTCAGG+AGG | + | chr5.1:15599547-15599566 | MS.gene86495:intron | 50.0% | |
| TCACGTATTCCTCGTGTTGC+AGG | + | chr5.1:15596746-15596765 | MS.gene86495:CDS | 50.0% | |
| TCAGCTGAATCATGGGGTAC+CGG | + | chr5.1:15596713-15596732 | MS.gene86495:CDS | 50.0% | |
| TGCCAAGACTGCTAAGAGGA+TGG | + | chr5.1:15597522-15597541 | MS.gene86495:CDS | 50.0% | |
| TGCTGAGGCTGAAAGGGTTA+AGG | + | chr5.1:15597552-15597571 | MS.gene86495:CDS | 50.0% | |
| TGCTGATGCTGAAAAGGCCA+AGG | + | chr5.1:15597057-15597076 | MS.gene86495:CDS | 50.0% | |
| TGGACGAAGTTGACGATGTC+AGG | - | chr5.1:15596629-15596648 | None:intergenic | 50.0% | |
| TGGTTCTTGCTCGTGGTCAT+AGG | + | chr5.1:15596933-15596952 | MS.gene86495:CDS | 50.0% | |
| TGTTTGCTCCGACTAGGATC+TGG | + | chr5.1:15596828-15596847 | MS.gene86495:CDS | 50.0% | |
| TTGAAGCACGCATGACATCG+GGG | - | chr5.1:15596601-15596620 | None:intergenic | 50.0% | |
| ! | ATAGCCTTGGGATTAGACCC+GGG | + | chr5.1:15597080-15597099 | MS.gene86495:CDS | 50.0% |
| ! | CGAAGGCGGTTAAGGCTTTT+AGG | + | chr5.1:15597173-15597192 | MS.gene86495:CDS | 50.0% |
| ! | CTTTGCTTGCTGAGGCTGAA+AGG | + | chr5.1:15597545-15597564 | MS.gene86495:CDS | 50.0% |
| ! | GATAGCCTTGGGATTAGACC+CGG | + | chr5.1:15597079-15597098 | MS.gene86495:CDS | 50.0% |
| !! | AGGTTTGGTGACCAGCTTTC+CGG | - | chr5.1:15596694-15596713 | None:intergenic | 50.0% |
| !! | ATGAGGTGCAGAGTGTTGTG+AGG | + | chr5.1:15597416-15597435 | MS.gene86495:CDS | 50.0% |
| !! | CCTTCATTGGTTCTTGCTCG+TGG | + | chr5.1:15596926-15596945 | MS.gene86495:CDS | 50.0% |
| !! | GTTGTTGGTGATGCTGCTGA+AGG | + | chr5.1:15596983-15597002 | MS.gene86495:CDS | 50.0% |
| !! | TGGAAGGGTGGTTGGTGAAT+CGG | - | chr5.1:15596576-15596595 | None:intergenic | 50.0% |
| !!! | TTTTGAAGCTTGCACCGGGT+GGG | + | chr5.1:15597239-15597258 | MS.gene86495:CDS | 50.0% |
| AAAGCGGCTGACCCCAAAAG+TGG | - | chr5.1:15598830-15598849 | None:intergenic | 55.0% | |
| AACCTACCCAAATGCCCACC+CGG | - | chr5.1:15597256-15597275 | None:intergenic | 55.0% | |
| AAGCGGCTGACCCCAAAAGT+GGG | - | chr5.1:15598829-15598848 | None:intergenic | 55.0% | |
| AGCGGTGCGGAATAAGACAG+CGG | + | chr5.1:15598417-15598436 | MS.gene86495:intron | 55.0% | |
| AGCTTTCCCTGCAGCCTTGA+TGG | - | chr5.1:15599582-15599601 | None:intergenic | 55.0% | |
| ATTCCTCGTGTTGCAGGTGG+TGG | + | chr5.1:15596752-15596771 | MS.gene86495:CDS | 55.0% | |
| CAAAAGCAGCCTGACCAGCA+CGG | - | chr5.1:15596784-15596803 | None:intergenic | 55.0% | |
| CAGCTGCTATAGCAGCGTAG+TGG | + | chr5.1:15598446-15598465 | MS.gene86495:intron | 55.0% | |
| CGTATTCCTCGTGTTGCAGG+TGG | + | chr5.1:15596749-15596768 | MS.gene86495:CDS | 55.0% | |
| CTTATTCCGCACCGCTACGA+CGG | - | chr5.1:15598413-15598432 | None:intergenic | 55.0% | |
| CTTCTGCCATCAAGGCTGCA+GGG | + | chr5.1:15599573-15599592 | MS.gene86495:CDS | 55.0% | |
| CTTGGGATTAGACCCGGGAA+GGG | + | chr5.1:15597085-15597104 | MS.gene86495:CDS | 55.0% | |
| GCATGACATCGGGGATTGGA+AGG | - | chr5.1:15596592-15596611 | None:intergenic | 55.0% | |
| GGAAGGGGAAGATGAGGAAC+AGG | + | chr5.1:15597101-15597120 | MS.gene86495:CDS | 55.0% | |
| GGAGGAAGCTTCTGCCATCA+AGG | + | chr5.1:15599565-15599584 | MS.gene86495:intron | 55.0% | |
| GGTACCCCATGATTCAGCTG+AGG | - | chr5.1:15596714-15596733 | None:intergenic | 55.0% | |
| GTTCCTCATCTTCCCCTTCC+CGG | - | chr5.1:15597101-15597120 | None:intergenic | 55.0% | |
| TCAAGGCTGCAGGGAAAGCT+TGG | + | chr5.1:15599582-15599601 | MS.gene86495:CDS | 55.0% | |
| TTCCTCATCTTCCCCTTCCC+GGG | - | chr5.1:15597100-15597119 | None:intergenic | 55.0% | |
| TTCCTCGTGTTGCAGGTGGT+GGG | + | chr5.1:15596753-15596772 | MS.gene86495:CDS | 55.0% | |
| TTGCTCCGACTAGGATCTGG+AGG | + | chr5.1:15596831-15596850 | MS.gene86495:CDS | 55.0% | |
| TTGGGATTAGACCCGGGAAG+GGG | + | chr5.1:15597086-15597105 | MS.gene86495:CDS | 55.0% | |
| ! | GAGGATGGCTTTGCTTGCTG+AGG | + | chr5.1:15597537-15597556 | MS.gene86495:CDS | 55.0% |
| ! | GCTATAGCAGCGTAGTGGAG+CGG | + | chr5.1:15598451-15598470 | MS.gene86495:intron | 55.0% |
| ! | TTATGGTACCGAAGGGGCGA+AGG | + | chr5.1:15597156-15597175 | MS.gene86495:CDS | 55.0% |
| !! | AAGGGTGGTTGGTGAATCGG+TGG | - | chr5.1:15596573-15596592 | None:intergenic | 55.0% |
| !!! | CTTTTGAAGCTTGCACCGGG+TGG | + | chr5.1:15597238-15597257 | MS.gene86495:CDS | 55.0% |
| CCTTCCCGGGTCTAATCCCA+AGG | - | chr5.1:15597087-15597106 | None:intergenic | 60.0% | |
| CCTTGGGATTAGACCCGGGA+AGG | + | chr5.1:15597084-15597103 | MS.gene86495:CDS | 60.0% | |
| CGCTACGACGGTTAGCGTAG+CGG | - | chr5.1:15598401-15598420 | None:intergenic | 60.0% | |
| CGCTACGCTAACCGTCGTAG+CGG | + | chr5.1:15598399-15598418 | MS.gene86495:intron | 60.0% | |
| CTTAACCGCCTTCGCCCCTT+CGG | - | chr5.1:15597167-15597186 | None:intergenic | 60.0% | |
| CTTGCACCGGGTGGGCATTT+GGG | + | chr5.1:15597247-15597266 | MS.gene86495:CDS | 60.0% | |
| GACAACCTTACGCCGTCAGC+CGG | + | chr5.1:15596672-15596691 | MS.gene86495:CDS | 60.0% | |
| GACATCGGGGATTGGAAGGG+TGG | - | chr5.1:15596588-15596607 | None:intergenic | 60.0% | |
| GCACGCATGACATCGGGGAT+TGG | - | chr5.1:15596596-15596615 | None:intergenic | 60.0% | |
| GCTGACGGCGTAAGGTTGTC+TGG | - | chr5.1:15596672-15596691 | None:intergenic | 60.0% | |
| GCTTCTGCCATCAAGGCTGC+AGG | + | chr5.1:15599572-15599591 | MS.gene86495:CDS | 60.0% | |
| GTGACCAGCTTTCCGGCTGA+CGG | - | chr5.1:15596687-15596706 | None:intergenic | 60.0% | |
| TCGGGGATTGGAAGGGTGGT+TGG | - | chr5.1:15596584-15596603 | None:intergenic | 60.0% | |
| !! | CGTGCTGGTCAGGCTGCTTT+TGG | + | chr5.1:15596782-15596801 | MS.gene86495:CDS | 60.0% |
| AAGCAGCCTGACCAGCACGG+TGG | - | chr5.1:15596781-15596800 | None:intergenic | 65.0% | |
| AGCAGCCTGACCAGCACGGT+GGG | - | chr5.1:15596780-15596799 | None:intergenic | 65.0% | |
| CACCGGGTGGGCATTTGGGT+AGG | + | chr5.1:15597251-15597270 | MS.gene86495:CDS | 65.0% | |
| CGAAGGGGCGAAGGCGGTTA+AGG | + | chr5.1:15597165-15597184 | MS.gene86495:CDS | 65.0% | |
| CGCTAACCGTCGTAGCGGTG+CGG | + | chr5.1:15598404-15598423 | MS.gene86495:intron | 65.0% | |
| GACCCGGGAAGGGGAAGATG+AGG | + | chr5.1:15597095-15597114 | MS.gene86495:CDS | 65.0% | |
| GCTTGCACCGGGTGGGCATT+TGG | + | chr5.1:15597246-15597265 | MS.gene86495:CDS | 65.0% | |
| GCTTTCCGGCTGACGGCGTA+AGG | - | chr5.1:15596680-15596699 | None:intergenic | 65.0% | |
| GTCCCACCACCTGCAACACG+AGG | - | chr5.1:15596758-15596777 | None:intergenic | 65.0% | |
| TACGCCGTCAGCCGGAAAGC+TGG | + | chr5.1:15596680-15596699 | MS.gene86495:CDS | 65.0% | |
| ! | AGCAGCGTAGTGGAGCGGAG+TGG | + | chr5.1:15598456-15598475 | MS.gene86495:intron | 65.0% |
| ! | TGGTACCGAAGGGGCGAAGG+CGG | + | chr5.1:15597159-15597178 | MS.gene86495:CDS | 65.0% |
| GTTAGCGTAGCGGCGACGCG+TGG | - | chr5.1:15598391-15598410 | None:intergenic | 70.0% | |
| ! | GAGGGGACGTGCTGCTGCTG+CGG | - | chr5.1:15596519-15596538 | None:intergenic | 70.0% |
| ! | TGGGACCCACCGTGCTGGTC+AGG | + | chr5.1:15596772-15596791 | MS.gene86495:CDS | 70.0% |
| ! | GGGACGTGCTGCTGCTGCGG+CGG | - | chr5.1:15596516-15596535 | None:intergenic | 75.0% |
| !! | GGTGGTGGGACCCACCGTGC+TGG | + | chr5.1:15596767-15596786 | MS.gene86495:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 15596509 | 15599679 | 15596509 | ID=MS.gene86495 |
| chr5.1 | mRNA | 15596509 | 15599679 | 15596509 | ID=MS.gene86495.t1;Parent=MS.gene86495 |
| chr5.1 | exon | 15596509 | 15597618 | 15596509 | ID=MS.gene86495.t1.exon1;Parent=MS.gene86495.t1 |
| chr5.1 | CDS | 15596509 | 15597618 | 15596509 | ID=cds.MS.gene86495.t1;Parent=MS.gene86495.t1 |
| chr5.1 | exon | 15599566 | 15599679 | 15599566 | ID=MS.gene86495.t1.exon2;Parent=MS.gene86495.t1 |
| chr5.1 | CDS | 15599566 | 15599679 | 15599566 | ID=cds.MS.gene86495.t1;Parent=MS.gene86495.t1 |
| Gene Sequence |
| Protein sequence |
