Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24255.t1 | XP_013466130.1 | 100 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 3.20E-133 | 484.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24255.t1 | P34066 | 85.9 | 241 | 34 | 0 | 1 | 241 | 1 | 241 | 8.5e-119 | 427.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24255.t1 | I3RZQ6 | 100.0 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 2.3e-133 | 484.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057144 | MS.gene24255 | 0.800767 | 1.24E-48 | -1.69E-46 |
| MS.gene057145 | MS.gene24255 | 0.807029 | 6.17E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24255.t1 | MTR_1g022410 | 97.887 | 284 | 3 | 1 | 1 | 281 | 1 | 284 | 0.0 | 573 |
| MS.gene24255.t1 | MTR_4g012740 | 78.571 | 322 | 25 | 3 | 1 | 281 | 232 | 550 | 2.45e-163 | 465 |
| MS.gene24255.t1 | MTR_4g012740 | 64.773 | 88 | 16 | 2 | 1 | 73 | 1 | 88 | 1.48e-24 | 103 |
| MS.gene24255.t1 | MTR_4g012740 | 63.636 | 88 | 17 | 2 | 1 | 73 | 78 | 165 | 2.13e-24 | 102 |
| MS.gene24255.t1 | MTR_4g012740 | 63.636 | 88 | 17 | 2 | 1 | 73 | 155 | 242 | 2.13e-24 | 102 |
| MS.gene24255.t1 | MTR_4g057090 | 70.175 | 285 | 55 | 4 | 1 | 281 | 83 | 341 | 6.53e-124 | 357 |
| MS.gene24255.t1 | MTR_3g113730 | 87.805 | 164 | 18 | 1 | 118 | 281 | 4 | 165 | 3.77e-103 | 298 |
| MS.gene24255.t1 | MTR_1g112250 | 45.902 | 183 | 94 | 2 | 1 | 178 | 3 | 185 | 7.61e-47 | 157 |
| MS.gene24255.t1 | MTR_7g070070 | 38.785 | 214 | 125 | 3 | 5 | 214 | 4 | 215 | 3.96e-43 | 147 |
| MS.gene24255.t1 | MTR_5g016590 | 38.785 | 214 | 125 | 3 | 5 | 214 | 4 | 215 | 6.34e-43 | 147 |
| MS.gene24255.t1 | MTR_0167s0060 | 35.111 | 225 | 141 | 3 | 1 | 223 | 1 | 222 | 2.17e-41 | 143 |
| MS.gene24255.t1 | MTR_6g024135 | 40.838 | 191 | 108 | 3 | 6 | 193 | 8 | 196 | 1.02e-38 | 136 |
| MS.gene24255.t1 | MTR_2g060830 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 1.62e-38 | 135 |
| MS.gene24255.t1 | MTR_8g464460 | 35.217 | 230 | 143 | 5 | 6 | 230 | 9 | 237 | 2.25e-38 | 135 |
| MS.gene24255.t1 | MTR_8g075320 | 37.736 | 212 | 123 | 4 | 5 | 210 | 3 | 211 | 8.29e-38 | 134 |
| MS.gene24255.t1 | MTR_2g016050 | 35.681 | 213 | 128 | 4 | 4 | 210 | 2 | 211 | 4.33e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24255.t1 | AT1G47250 | 78.445 | 283 | 53 | 2 | 1 | 281 | 1 | 277 | 6.24e-160 | 446 |
| MS.gene24255.t1 | AT5G42790 | 86.134 | 238 | 33 | 0 | 1 | 238 | 1 | 238 | 6.61e-159 | 443 |
| MS.gene24255.t1 | AT1G53850 | 38.819 | 237 | 135 | 4 | 1 | 232 | 3 | 234 | 2.41e-46 | 155 |
| MS.gene24255.t1 | AT1G53850 | 38.819 | 237 | 135 | 4 | 1 | 232 | 3 | 234 | 2.41e-46 | 155 |
| MS.gene24255.t1 | AT3G14290 | 45.355 | 183 | 95 | 2 | 1 | 178 | 3 | 185 | 2.44e-46 | 155 |
| MS.gene24255.t1 | AT3G22110 | 36.017 | 236 | 141 | 4 | 5 | 232 | 4 | 237 | 2.43e-43 | 148 |
| MS.gene24255.t1 | AT1G16470 | 36.444 | 225 | 138 | 3 | 1 | 223 | 1 | 222 | 2.39e-40 | 140 |
| MS.gene24255.t1 | AT1G16470 | 36.444 | 225 | 138 | 3 | 1 | 223 | 1 | 222 | 2.39e-40 | 140 |
| MS.gene24255.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene24255.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene24255.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene24255.t1 | AT5G35590 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 1.95e-38 | 135 |
| MS.gene24255.t1 | AT5G66140 | 38.208 | 212 | 122 | 4 | 5 | 210 | 3 | 211 | 4.08e-37 | 132 |
| MS.gene24255.t1 | AT2G05840 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 4.32e-37 | 132 |
| MS.gene24255.t1 | AT3G51260 | 37.264 | 212 | 124 | 4 | 5 | 210 | 3 | 211 | 5.50e-36 | 129 |
| MS.gene24255.t1 | AT3G51260 | 37.264 | 212 | 124 | 4 | 5 | 210 | 3 | 211 | 6.42e-36 | 129 |
| MS.gene24255.t1 | AT2G05840 | 36.181 | 199 | 123 | 3 | 6 | 200 | 9 | 207 | 1.40e-35 | 127 |
| MS.gene24255.t1 | AT2G27020 | 37.895 | 190 | 115 | 2 | 6 | 193 | 8 | 196 | 8.12e-35 | 126 |
| MS.gene24255.t1 | AT2G05840 | 36.170 | 188 | 116 | 3 | 6 | 189 | 9 | 196 | 1.18e-33 | 122 |
| MS.gene24255.t1 | AT2G27020 | 37.895 | 190 | 115 | 2 | 6 | 193 | 110 | 298 | 1.77e-33 | 125 |
| MS.gene24255.t1 | AT4G15165 | 33.654 | 208 | 87 | 7 | 5 | 204 | 4 | 168 | 2.35e-25 | 100 |
Find 83 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGAGCCTTTCCACATTT+TGG | 0.215333 | 1.1:+1876613 | MS.gene24255:CDS |
| CGCGAGAACCACGTGAGTTT+TGG | 0.220139 | 1.1:-1873540 | None:intergenic |
| ACAAGCTGCAAAGACATATT+TGG | 0.303194 | 1.1:+1876460 | MS.gene24255:CDS |
| TCCTGCTCAGCTGCAGCCTC+AGG | 0.321152 | 1.1:-1876707 | None:intergenic |
| TAACCTAACCTGAGCCTTAT+CGG | 0.340591 | 1.1:-1873759 | None:intergenic |
| GCTGCCACAGATCAGGCTTC+TGG | 0.352014 | 1.1:+1876731 | MS.gene24255:CDS |
| CGATCATGGAAGCGTCCTTA+TGG | 0.372743 | 1.1:+1876329 | MS.gene24255:CDS |
| GTAGCTGGATTAGATGAATC+AGG | 0.390011 | 1.1:+1876365 | MS.gene24255:CDS |
| ATGAGAAGAGAGTTCAGAAT+TGG | 0.397456 | 1.1:-1873576 | None:intergenic |
| GGCGTTGGACTTCTAGTAGC+TGG | 0.403744 | 1.1:+1876350 | MS.gene24255:CDS |
| CGCTTGGGCAGTTGTAATAG+AGG | 0.407257 | 1.1:-1876394 | None:intergenic |
| GCTGCAGCCTCAGGTTCAGC+AGG | 0.411570 | 1.1:-1876698 | None:intergenic |
| ACCTGAGGCTGCAGCTGAGC+AGG | 0.426509 | 1.1:+1876706 | MS.gene24255:CDS |
| TCATCAGAAGAAGATCTTCA+AGG | 0.432131 | 1.1:+1873595 | MS.gene24255:CDS |
| GCAGGATGCTGCCACAGATC+AGG | 0.446173 | 1.1:+1876724 | MS.gene24255:CDS |
| TTAAATTATCAAATCTCCAT+TGG | 0.446472 | 1.1:-1876797 | None:intergenic |
| AAGCAAGGTTCAGCAGCAAT+AGG | 0.446969 | 1.1:+1873509 | MS.gene24255:CDS |
| ACCGGCGGGAAGACTCTTCC+AGG | 0.447398 | 1.1:+1873463 | MS.gene24255:CDS |
| CATCTTTGATCAGATCTTCC+CGG | 0.448900 | 1.1:-1876514 | None:intergenic |
| CAGATCAAAGTGGTGCTGGT+GGG | 0.452356 | 1.1:+1876756 | MS.gene24255:CDS |
| CCTTGCAAGGTGAAAAGCTC+AGG | 0.463589 | 1.1:+1876558 | MS.gene24255:CDS |
| GCATTCAGATCTCATGTAAC+GGG | 0.468182 | 1.1:-1873675 | None:intergenic |
| GATCAGATCTTCCCGGGAGG+AGG | 0.468370 | 1.1:-1876507 | None:intergenic |
| ACGGCCATCGGCGGTGAGAC+CGG | 0.470971 | 1.1:-1873645 | None:intergenic |
| GGTGCTGGTGGGGCTGACCA+AGG | 0.471608 | 1.1:+1876767 | MS.gene24255:CDS |
| GCAGATCAAAGTGGTGCTGG+TGG | 0.482449 | 1.1:+1876755 | MS.gene24255:CDS |
| CGTCGTTCAGCTCGCCGATA+AGG | 0.485800 | 1.1:+1873745 | MS.gene24255:CDS |
| ATTCAAAATAGTTTCCGCTT+GGG | 0.489662 | 1.1:-1876409 | None:intergenic |
| ACTAGAAGTCCAACGCCATA+AGG | 0.491926 | 1.1:-1876344 | None:intergenic |
| AGGTTTGCACTCAGCGATCA+TGG | 0.494067 | 1.1:+1876315 | MS.gene24255:intron |
| ACAACTTCACAGCCTCCTCC+CGG | 0.497935 | 1.1:+1876495 | MS.gene24255:CDS |
| GAATATCAGGCATTTGCAAT+CGG | 0.498552 | 1.1:+1876428 | MS.gene24255:CDS |
| CTTCCATGGCGTATTCCACC+TGG | 0.500589 | 1.1:-1873481 | None:intergenic |
| TATTCAAAATAGTTTCCGCT+TGG | 0.508568 | 1.1:-1876410 | None:intergenic |
| ACCATTGCTGTGGTTGGAGT+TGG | 0.514251 | 1.1:+1876593 | MS.gene24255:CDS |
| TTCAAGGTTGATGATCATAT+CGG | 0.515192 | 1.1:+1873611 | MS.gene24255:CDS |
| ATCTTTGATCAGATCTTCCC+GGG | 0.521887 | 1.1:-1876513 | None:intergenic |
| AAGATGCACTCATTGCAACT+AGG | 0.529448 | 1.1:+1876531 | MS.gene24255:CDS |
| AGATCAAAGTGGTGCTGGTG+GGG | 0.531118 | 1.1:+1876757 | MS.gene24255:CDS |
| GGTGCAGATCAAAGTGGTGC+TGG | 0.531835 | 1.1:+1876752 | MS.gene24255:CDS |
| TGGAAGCGTCCTTATGGCGT+TGG | 0.534162 | 1.1:+1876335 | MS.gene24255:CDS |
| AACCACAGCAATGGTGCATA+CGG | 0.536605 | 1.1:-1876585 | None:intergenic |
| CTCTATTACAACTGCCCAAG+CGG | 0.540260 | 1.1:+1876395 | MS.gene24255:CDS |
| ACGAGTCTACCAACGGGAAG+CGG | 0.541672 | 1.1:-1873725 | None:intergenic |
| AGATGCACTCATTGCAACTA+GGG | 0.552459 | 1.1:+1876532 | MS.gene24255:CDS |
| TCAGCTCGCCGATAAGGCTC+AGG | 0.552948 | 1.1:+1873751 | MS.gene24255:CDS |
| CATATCGGCGTTGCCATCGC+CGG | 0.553468 | 1.1:+1873626 | MS.gene24255:CDS |
| GTATGCACCATTGCTGTGGT+TGG | 0.557714 | 1.1:+1876587 | MS.gene24255:CDS |
| ATCGCCGGTCTCACCGCCGA+TGG | 0.557766 | 1.1:+1873641 | MS.gene24255:CDS |
| ACCTTGCTTAACTGCTTCCA+TGG | 0.560856 | 1.1:-1873495 | None:intergenic |
| TGCATTCAGATCTCATGTAA+CGG | 0.564752 | 1.1:-1873676 | None:intergenic |
| CGACGTAACAACATGGTCAC+CGG | 0.568536 | 1.1:+1873445 | MS.gene24255:CDS |
| TGAACGACGAGTCTACCAAC+GGG | 0.572203 | 1.1:-1873731 | None:intergenic |
| TAGCTGGATTAGATGAATCA+GGG | 0.572392 | 1.1:+1876366 | MS.gene24255:CDS |
| ACGGGAAAGAACACGGCCAT+CGG | 0.576909 | 1.1:-1873657 | None:intergenic |
| CAGTTTCCTGATCCAAAATG+TGG | 0.582560 | 1.1:-1876625 | None:intergenic |
| TATGAATCTCCGCTTCCCGT+TGG | 0.585267 | 1.1:+1873716 | MS.gene24255:CDS |
| AGCTGCACCTGCTGAACCTG+AGG | 0.586152 | 1.1:+1876691 | MS.gene24255:CDS |
| CAACTTCACAGCCTCCTCCC+GGG | 0.586785 | 1.1:+1876496 | MS.gene24255:CDS |
| TGACCAAGGTGGTTCTCCAA+TGG | 0.586988 | 1.1:+1876781 | MS.gene24255:CDS |
| ATCGGCGGTGAGACCGGCGA+TGG | 0.592757 | 1.1:-1873639 | None:intergenic |
| TCCTGATCCAAAATGTGGAA+AGG | 0.593184 | 1.1:-1876620 | None:intergenic |
| ACCAACTCCAACCACAGCAA+TGG | 0.594452 | 1.1:-1876594 | None:intergenic |
| GCTGGTGGGGCTGACCAAGG+TGG | 0.603851 | 1.1:+1876770 | MS.gene24255:CDS |
| CTTCCAGGTGGAATACGCCA+TGG | 0.612270 | 1.1:+1873478 | MS.gene24255:CDS |
| CTCCGTATGCACCATTGCTG+TGG | 0.615712 | 1.1:+1876583 | MS.gene24255:CDS |
| GCAACTAGGGAGTCCTTGCA+AGG | 0.618439 | 1.1:+1876545 | MS.gene24255:CDS |
| TCTCCATTGGAGAACCACCT+TGG | 0.619130 | 1.1:-1876784 | None:intergenic |
| ACCTGGAAGAGTCTTCCCGC+CGG | 0.625765 | 1.1:-1873464 | None:intergenic |
| GTAACAACATGGTCACCGGC+GGG | 0.626802 | 1.1:+1873449 | MS.gene24255:CDS |
| CGTAACAACATGGTCACCGG+CGG | 0.638962 | 1.1:+1873448 | MS.gene24255:CDS |
| GGAAAGAACACGGCCATCGG+CGG | 0.645115 | 1.1:-1873654 | None:intergenic |
| TGCACCAGAAGCCTGATCTG+TGG | 0.645294 | 1.1:-1876735 | None:intergenic |
| TCATGTAACGGGAAAGAACA+CGG | 0.645339 | 1.1:-1873664 | None:intergenic |
| CTGAACGACGAGTCTACCAA+CGG | 0.653690 | 1.1:-1873732 | None:intergenic |
| ACGATACCGACGTAACAACA+TGG | 0.654506 | 1.1:+1873438 | MS.gene24255:CDS |
| GCCATGGAAGCAGTTAAGCA+AGG | 0.656151 | 1.1:+1873494 | MS.gene24255:CDS |
| AGCTGGATTAGATGAATCAG+GGG | 0.660204 | 1.1:+1876367 | MS.gene24255:CDS |
| CGGTGACCATGTTGTTACGT+CGG | 0.692398 | 1.1:-1873444 | None:intergenic |
| GCTTCTGGTGCAGATCAAAG+TGG | 0.697173 | 1.1:+1876746 | MS.gene24255:CDS |
| GGCGGGAAGACTCTTCCAGG+TGG | 0.706418 | 1.1:+1873466 | MS.gene24255:CDS |
| TCTCCGATCCAAAACTCACG+TGG | 0.728289 | 1.1:+1873532 | MS.gene24255:CDS |
| TTTGATCAGATCTTCCCGGG+AGG | 0.729135 | 1.1:-1876510 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTAAATTAAGTAATTTTAA+TGG | + | chr1.1:1873885-1873904 | MS.gene24255:intron | 10.0% |
| !! | AAATAATAACAAAATCAAAC+AGG | - | chr1.1:1874618-1874637 | None:intergenic | 15.0% |
| !! | ATTCAATAAACTAAAACATT+TGG | + | chr1.1:1876079-1876098 | MS.gene24255:intron | 15.0% |
| !! | TTCTCTAATGTTTATTATAT+AGG | + | chr1.1:1874447-1874466 | MS.gene24255:intron | 15.0% |
| !!! | ACTATTTTGTATACTTAATA+TGG | + | chr1.1:1875097-1875116 | MS.gene24255:intron | 15.0% |
| !! | AAACATTAGAGAATACATTT+CGG | - | chr1.1:1874440-1874459 | None:intergenic | 20.0% |
| !! | AAATACAGTGTTAACAAAAA+GGG | - | chr1.1:1874032-1874051 | None:intergenic | 20.0% |
| !! | ATATAGAAACAGCATAAATA+GGG | - | chr1.1:1876024-1876043 | None:intergenic | 20.0% |
| !! | ATATTACATGGAAAAGAATA+AGG | + | chr1.1:1876221-1876240 | MS.gene24255:intron | 20.0% |
| !! | CAAAATTACATCATAAATAC+TGG | - | chr1.1:1876289-1876308 | None:intergenic | 20.0% |
| !! | TATATAGAAACAGCATAAAT+AGG | - | chr1.1:1876025-1876044 | None:intergenic | 20.0% |
| !! | TTTAACTCAGTAATTCAATT+AGG | + | chr1.1:1873863-1873882 | MS.gene24255:intron | 20.0% |
| !!! | ATTTATGATGTAATTTTGAG+TGG | + | chr1.1:1876291-1876310 | MS.gene24255:intron | 20.0% |
| !!! | GTGTTTTATTAATAGAAAGT+TGG | + | chr1.1:1876152-1876171 | MS.gene24255:intron | 20.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr1.1:1874255-1874274 | MS.gene24255:intron | 25.0% |
| ! | AAAATACTATGATGCTTCTA+TGG | + | chr1.1:1874574-1874593 | MS.gene24255:intron | 25.0% |
| ! | ACACACATTTATATACTTCT+GGG | - | chr1.1:1875023-1875042 | None:intergenic | 25.0% |
| ! | AGGTACAAAAATTATTTCAC+AGG | - | chr1.1:1874925-1874944 | None:intergenic | 25.0% |
| ! | ATTTATATACTTCTGGGTAT+AGG | - | chr1.1:1875017-1875036 | None:intergenic | 25.0% |
| ! | CAAATACAGTGTTAACAAAA+AGG | - | chr1.1:1874033-1874052 | None:intergenic | 25.0% |
| ! | GTATACTTAATATGGAAGTA+GGG | + | chr1.1:1875105-1875124 | MS.gene24255:intron | 25.0% |
| ! | TAGTCGAGATTATTTACTTT+AGG | + | chr1.1:1873971-1873990 | MS.gene24255:intron | 25.0% |
| ! | TATAGAAACAGCATAAATAG+GGG | - | chr1.1:1876023-1876042 | None:intergenic | 25.0% |
| ! | TATTAATAGAAAGTTGGACA+GGG | + | chr1.1:1876158-1876177 | MS.gene24255:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr1.1:1874143-1874162 | MS.gene24255:intron | 25.0% |
| ! | TGTATACTTAATATGGAAGT+AGG | + | chr1.1:1875104-1875123 | MS.gene24255:intron | 25.0% |
| ! | TGTTCGGATTATTCTAATTA+GGG | + | chr1.1:1873810-1873829 | MS.gene24255:intron | 25.0% |
| ! | TTATTAATAGAAAGTTGGAC+AGG | + | chr1.1:1876157-1876176 | MS.gene24255:intron | 25.0% |
| ! | TTGAATGAATTAAATAGACC+AGG | - | chr1.1:1876065-1876084 | None:intergenic | 25.0% |
| ! | TTGTTCGGATTATTCTAATT+AGG | + | chr1.1:1873809-1873828 | MS.gene24255:intron | 25.0% |
| !! | AAACGTTTGAAACTATGTTT+AGG | + | chr1.1:1874399-1874418 | MS.gene24255:intron | 25.0% |
| !! | ATCATACTCTTTTTGATGTT+TGG | + | chr1.1:1874845-1874864 | MS.gene24255:intron | 25.0% |
| !! | ATTTGGTTAGTTAATCAACA+TGG | + | chr1.1:1876096-1876115 | MS.gene24255:intron | 25.0% |
| !! | GATTTGACTTAACTCTTATT+GGG | + | chr1.1:1875930-1875949 | MS.gene24255:intron | 25.0% |
| !! | TGATTTGACTTAACTCTTAT+TGG | + | chr1.1:1875929-1875948 | MS.gene24255:intron | 25.0% |
| !! | TTTCAGTTTTCAACTTTTGT+TGG | + | chr1.1:1874292-1874311 | MS.gene24255:intron | 25.0% |
| !!! | CATCAAAAAGAGTATGATTT+TGG | - | chr1.1:1874843-1874862 | None:intergenic | 25.0% |
| !!! | TAAAGTGTTAACAACACTTT+TGG | + | chr1.1:1875986-1876005 | MS.gene24255:intron | 25.0% |
| !!! | TGACAGTCATTTTGTATTTA+AGG | - | chr1.1:1875460-1875479 | None:intergenic | 25.0% |
| !!! | TGTAAATGTTGTTTTGATAG+TGG | + | chr1.1:1875198-1875217 | MS.gene24255:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr1.1:1874256-1874275 | MS.gene24255:intron | 30.0% | |
| ACGGTGTAGTTATTCAAATT+GGG | + | chr1.1:1875284-1875303 | MS.gene24255:intron | 30.0% | |
| ATAGTTACTATATGTGAACC+TGG | + | chr1.1:1876044-1876063 | MS.gene24255:intron | 30.0% | |
| ATCTTGTCTTGCATATTACA+TGG | + | chr1.1:1876209-1876228 | MS.gene24255:intron | 30.0% | |
| ATTCAAAATAGTTTCCGCTT+GGG | - | chr1.1:1876412-1876431 | None:intergenic | 30.0% | |
| CAAAAATAAGCCAATCCAAA+TGG | - | chr1.1:1874095-1874114 | None:intergenic | 30.0% | |
| CACACACATTTATATACTTC+TGG | - | chr1.1:1875024-1875043 | None:intergenic | 30.0% | |
| CATATGATAGAGATTAGAGA+CGG | + | chr1.1:1875252-1875271 | MS.gene24255:intron | 30.0% | |
| GACAGTGATTAGAATGAAAT+GGG | + | chr1.1:1874052-1874071 | MS.gene24255:intron | 30.0% | |
| TAATTGTGATTGAGAGAAGA+TGG | + | chr1.1:1874348-1874367 | MS.gene24255:intron | 30.0% | |
| TACGGTGTAGTTATTCAAAT+TGG | + | chr1.1:1875283-1875302 | MS.gene24255:intron | 30.0% | |
| TATCTTACTTTCATTCTCTG+TGG | + | chr1.1:1875417-1875436 | MS.gene24255:intron | 30.0% | |
| TATTCAAAATAGTTTCCGCT+TGG | - | chr1.1:1876413-1876432 | None:intergenic | 30.0% | |
| TGACAGTGATTAGAATGAAA+TGG | + | chr1.1:1874051-1874070 | MS.gene24255:intron | 30.0% | |
| TGATTTACTTAGCATTGTAG+TGG | + | chr1.1:1875558-1875577 | MS.gene24255:intron | 30.0% | |
| TTGAATGTCTTGAGAATTTG+AGG | + | chr1.1:1874636-1874655 | MS.gene24255:intron | 30.0% | |
| ! | CAGAAGTATATAAATGTGTG+TGG | + | chr1.1:1875022-1875041 | MS.gene24255:intron | 30.0% |
| ! | CTTTTTGATGTTTGGTTGTT+TGG | + | chr1.1:1874853-1874872 | MS.gene24255:intron | 30.0% |
| !! | ATCACTTTTGAGCTGTTATT+TGG | + | chr1.1:1875069-1875088 | MS.gene24255:intron | 30.0% |
| !! | ATCTAGAGGGAGTATATTTT+CGG | + | chr1.1:1874376-1874395 | MS.gene24255:intron | 30.0% |
| !! | CGGAAACTATTTTGAATATC+AGG | + | chr1.1:1876415-1876434 | MS.gene24255:CDS | 30.0% |
| !! | GATTTGATTTGTTATGCTTG+TGG | + | chr1.1:1873929-1873948 | MS.gene24255:intron | 30.0% |
| !! | GTATGATTTTGGCAAAATCA+CGG | - | chr1.1:1874832-1874851 | None:intergenic | 30.0% |
| !! | TAACTTGCTTGTAGAATAAC+TGG | + | chr1.1:1875851-1875870 | MS.gene24255:intron | 30.0% |
| !! | TGTTTTGTTACGATCCATTA+TGG | + | chr1.1:1875349-1875368 | MS.gene24255:intron | 30.0% |
| !! | TTCAAGGTTGATGATCATAT+CGG | + | chr1.1:1873611-1873630 | MS.gene24255:CDS | 30.0% |
| !!! | AATTGTAGCTAGGGTTTTTT+AGG | + | chr1.1:1873839-1873858 | MS.gene24255:intron | 30.0% |
| !!! | ATTGTAGCTAGGGTTTTTTA+GGG | + | chr1.1:1873840-1873859 | MS.gene24255:intron | 30.0% |
| !!! | GAGAATTTGAGGTTTTTAGT+TGG | + | chr1.1:1874647-1874666 | MS.gene24255:intron | 30.0% |
| !!! | TGATACTTTTGAGATTGTGA+GGG | + | chr1.1:1876661-1876680 | MS.gene24255:CDS | 30.0% |
| !!! | TTGATACTTTTGAGATTGTG+AGG | + | chr1.1:1876660-1876679 | MS.gene24255:CDS | 30.0% |
| ACAAGCTGCAAAGACATATT+TGG | + | chr1.1:1876460-1876479 | MS.gene24255:CDS | 35.0% | |
| ACAGAGGTAAAAACGGAAAA+CGG | - | chr1.1:1873789-1873808 | None:intergenic | 35.0% | |
| AGAATAATCCGAACAAACAG+AGG | - | chr1.1:1873805-1873824 | None:intergenic | 35.0% | |
| AGTTCCGTTGACATTCATTA+GGG | - | chr1.1:1875323-1875342 | None:intergenic | 35.0% | |
| ATATACTTCTGGGTATAGGT+TGG | - | chr1.1:1875013-1875032 | None:intergenic | 35.0% | |
| ATCCATTATGGATGTTCTAG+GGG | + | chr1.1:1875361-1875380 | MS.gene24255:intron | 35.0% | |
| ATGAGAAGAGAGTTCAGAAT+TGG | - | chr1.1:1873579-1873598 | None:intergenic | 35.0% | |
| ATGCATAGAGAAATCCTGAA+GGG | + | chr1.1:1875696-1875715 | MS.gene24255:intron | 35.0% | |
| CAGTGTTAACAAAAAGGGTT+TGG | - | chr1.1:1874027-1874046 | None:intergenic | 35.0% | |
| CGAACAAACAGAGGTAAAAA+CGG | - | chr1.1:1873796-1873815 | None:intergenic | 35.0% | |
| CGGTAAGTTTGACAAAATCA+CGG | + | chr1.1:1874761-1874780 | MS.gene24255:intron | 35.0% | |
| GAAAACTGAAACAGACACTA+AGG | - | chr1.1:1874283-1874302 | None:intergenic | 35.0% | |
| GAATATCAGGCATTTGCAAT+CGG | + | chr1.1:1876428-1876447 | MS.gene24255:CDS | 35.0% | |
| GATCCATTATGGATGTTCTA+GGG | + | chr1.1:1875360-1875379 | MS.gene24255:intron | 35.0% | |
| GGTAAGTTTGACAAAATCAC+GGG | + | chr1.1:1874762-1874781 | MS.gene24255:intron | 35.0% | |
| TATGATGCTTCTATGGTGTT+TGG | + | chr1.1:1874581-1874600 | MS.gene24255:intron | 35.0% | |
| TCATCAGAAGAAGATCTTCA+AGG | + | chr1.1:1873595-1873614 | MS.gene24255:CDS | 35.0% | |
| TGCATTCAGATCTCATGTAA+CGG | - | chr1.1:1873679-1873698 | None:intergenic | 35.0% | |
| TGTAAGATTCAGTGTCCATT+TGG | + | chr1.1:1874077-1874096 | MS.gene24255:intron | 35.0% | |
| TTCACTTTCCCATTACTATG+AGG | - | chr1.1:1875391-1875410 | None:intergenic | 35.0% | |
| ! | AGTTTTCAACTTTTGTTGGC+TGG | + | chr1.1:1874296-1874315 | MS.gene24255:intron | 35.0% |
| ! | CGTTTTTACCTCTGTTTGTT+CGG | + | chr1.1:1873794-1873813 | MS.gene24255:intron | 35.0% |
| ! | CTAATGACACGTTCTACTTT+TGG | - | chr1.1:1874493-1874512 | None:intergenic | 35.0% |
| ! | TAGCTGGATTAGATGAATCA+GGG | + | chr1.1:1876366-1876385 | MS.gene24255:CDS | 35.0% |
| ! | TCTTCTCTTTCAAGGTTTTG+AGG | + | chr1.1:1875518-1875537 | MS.gene24255:intron | 35.0% |
| !! | ACTTTAGGATCTTAACTGAG+TGG | + | chr1.1:1873986-1874005 | MS.gene24255:intron | 35.0% |
| !! | ATGATGTAATTTTGAGTGGC+AGG | + | chr1.1:1876295-1876314 | MS.gene24255:intron | 35.0% |
| !! | TCATTAGTTTCCTCTCCTTT+TGG | + | chr1.1:1874506-1874525 | MS.gene24255:intron | 35.0% |
| !! | TCTCCTTTTGGTCTTTTTTG+CGG | + | chr1.1:1874518-1874537 | MS.gene24255:intron | 35.0% |
| !!! | AGGGTTTTGAAATTGTAGCT+AGG | + | chr1.1:1873829-1873848 | MS.gene24255:intron | 35.0% |
| !!! | GGGTTTTGAAATTGTAGCTA+GGG | + | chr1.1:1873830-1873849 | MS.gene24255:intron | 35.0% |
| AAACAGCATAAATAGGGGAG+GGG | - | chr1.1:1876018-1876037 | None:intergenic | 40.0% | |
| AAGATGCACTCATTGCAACT+AGG | + | chr1.1:1876531-1876550 | MS.gene24255:CDS | 40.0% | |
| AATAGAAAGTTGGACAGGGT+GGG | + | chr1.1:1876162-1876181 | MS.gene24255:intron | 40.0% | |
| AGAAACAGCATAAATAGGGG+AGG | - | chr1.1:1876020-1876039 | None:intergenic | 40.0% | |
| AGAAGATGGAAGCAATCTAG+AGG | + | chr1.1:1874362-1874381 | MS.gene24255:intron | 40.0% | |
| AGATGCACTCATTGCAACTA+GGG | + | chr1.1:1876532-1876551 | MS.gene24255:CDS | 40.0% | |
| ATCTTTGATCAGATCTTCCC+GGG | - | chr1.1:1876516-1876535 | None:intergenic | 40.0% | |
| ATTGTCTAAACTGTCGTGAG+AGG | + | chr1.1:1875620-1875639 | MS.gene24255:intron | 40.0% | |
| CAGTTCCGTTGACATTCATT+AGG | - | chr1.1:1875324-1875343 | None:intergenic | 40.0% | |
| CAGTTTCCTGATCCAAAATG+TGG | - | chr1.1:1876628-1876647 | None:intergenic | 40.0% | |
| CATCTTTGATCAGATCTTCC+CGG | - | chr1.1:1876517-1876536 | None:intergenic | 40.0% | |
| CATGCATAGAGAAATCCTGA+AGG | + | chr1.1:1875695-1875714 | MS.gene24255:intron | 40.0% | |
| CGATCCATTATGGATGTTCT+AGG | + | chr1.1:1875359-1875378 | MS.gene24255:intron | 40.0% | |
| CGGTTGGCAAAAACTAAGTT+TGG | - | chr1.1:1874812-1874831 | None:intergenic | 40.0% | |
| CTGAAACGTCTTCTCTTTCA+AGG | + | chr1.1:1875510-1875529 | MS.gene24255:intron | 40.0% | |
| CTTACTTTCATTCTCTGTGG+AGG | + | chr1.1:1875420-1875439 | MS.gene24255:intron | 40.0% | |
| GAAACAGCATAAATAGGGGA+GGG | - | chr1.1:1876019-1876038 | None:intergenic | 40.0% | |
| GAAGATGGAAGCAATCTAGA+GGG | + | chr1.1:1874363-1874382 | MS.gene24255:intron | 40.0% | |
| GATTCAGTGTCCATTTGGAT+TGG | + | chr1.1:1874082-1874101 | MS.gene24255:intron | 40.0% | |
| GCAAAAAAGACCAAAAGGAG+AGG | - | chr1.1:1874519-1874538 | None:intergenic | 40.0% | |
| GCATTCAGATCTCATGTAAC+GGG | - | chr1.1:1873678-1873697 | None:intergenic | 40.0% | |
| TAATAGAAAGTTGGACAGGG+TGG | + | chr1.1:1876161-1876180 | MS.gene24255:intron | 40.0% | |
| TAATATGGAAGTAGGGAGAC+TGG | + | chr1.1:1875112-1875131 | MS.gene24255:intron | 40.0% | |
| TACCCCTAGAACATCCATAA+TGG | - | chr1.1:1875366-1875385 | None:intergenic | 40.0% | |
| TACGCTGTTGTGTTGTCTTA+TGG | + | chr1.1:1875790-1875809 | MS.gene24255:intron | 40.0% | |
| TCCTGATCCAAAATGTGGAA+AGG | - | chr1.1:1876623-1876642 | None:intergenic | 40.0% | |
| TGCACCCTAATGAATGTCAA+CGG | + | chr1.1:1875316-1875335 | MS.gene24255:intron | 40.0% | |
| TGCATAGAGAAATCCTGAAG+GGG | + | chr1.1:1875697-1875716 | MS.gene24255:intron | 40.0% | |
| TGTAGAATAACTGGCTGAAC+AGG | + | chr1.1:1875860-1875879 | MS.gene24255:intron | 40.0% | |
| TGTCTTCTTGACAAACACGA+CGG | - | chr1.1:1874948-1874967 | None:intergenic | 40.0% | |
| TGTTGTCTTATGGTGTGAAG+TGG | + | chr1.1:1875800-1875819 | MS.gene24255:intron | 40.0% | |
| TTAGAGACGGAGTTAGACTA+CGG | + | chr1.1:1875265-1875284 | MS.gene24255:intron | 40.0% | |
| ! | AGCTGGATTAGATGAATCAG+GGG | + | chr1.1:1876367-1876386 | MS.gene24255:CDS | 40.0% |
| ! | GTAGCTGGATTAGATGAATC+AGG | + | chr1.1:1876365-1876384 | MS.gene24255:CDS | 40.0% |
| ! | TAACCTAACCTGAGCCTTAT+CGG | - | chr1.1:1873762-1873781 | None:intergenic | 40.0% |
| ! | TCATAGTATTTTGCCTACCC+AGG | - | chr1.1:1874566-1874585 | None:intergenic | 40.0% |
| ! | TCATGTAACGGGAAAGAACA+CGG | - | chr1.1:1873667-1873686 | None:intergenic | 40.0% |
| ! | TTGTTGCTTGTGTGAAATGG+CGG | + | chr1.1:1874741-1874760 | MS.gene24255:intron | 40.0% |
| !! | CTCCTTTTGGTCTTTTTTGC+GGG | + | chr1.1:1874519-1874538 | MS.gene24255:intron | 40.0% |
| !! | GACTTGTTGCTTGTGTGAAA+TGG | + | chr1.1:1874738-1874757 | MS.gene24255:intron | 40.0% |
| !! | GATTTTGGCAAAATCACGGT+TGG | - | chr1.1:1874828-1874847 | None:intergenic | 40.0% |
| !! | TCCTTTTGGTCTTTTTTGCG+GGG | + | chr1.1:1874520-1874539 | MS.gene24255:intron | 40.0% |
| !!! | CTCTTTCAAGGTTTTGAGGA+GGG | + | chr1.1:1875522-1875541 | MS.gene24255:intron | 40.0% |
| !!! | GTTTGCTGACTCTTGTTTTC+TGG | + | chr1.1:1874711-1874730 | MS.gene24255:intron | 40.0% |
| !!! | TACTTTTGAGATTGTGAGGG+AGG | + | chr1.1:1876664-1876683 | MS.gene24255:CDS | 40.0% |
| !!! | TCTCTTTCAAGGTTTTGAGG+AGG | + | chr1.1:1875521-1875540 | MS.gene24255:intron | 40.0% |
| AAACTGTCGTGAGAGGCTAT+TGG | + | chr1.1:1875627-1875646 | MS.gene24255:intron | 45.0% | |
| AACAGCATAAATAGGGGAGG+GGG | - | chr1.1:1876017-1876036 | None:intergenic | 45.0% | |
| AACCACAGCAATGGTGCATA+CGG | - | chr1.1:1876588-1876607 | None:intergenic | 45.0% | |
| AAGCAAGGTTCAGCAGCAAT+AGG | + | chr1.1:1873509-1873528 | MS.gene24255:CDS | 45.0% | |
| ACCTTGCTTAACTGCTTCCA+TGG | - | chr1.1:1873498-1873517 | None:intergenic | 45.0% | |
| ACGATACCGACGTAACAACA+TGG | + | chr1.1:1873438-1873457 | MS.gene24255:CDS | 45.0% | |
| ACTAGAAGTCCAACGCCATA+AGG | - | chr1.1:1876347-1876366 | None:intergenic | 45.0% | |
| AGGGGTAGACCTCATAGTAA+TGG | + | chr1.1:1875379-1875398 | MS.gene24255:intron | 45.0% | |
| AGTGTCTCTGTTAGTGACTG+TGG | + | chr1.1:1874673-1874692 | MS.gene24255:intron | 45.0% | |
| CTCTATTACAACTGCCCAAG+CGG | + | chr1.1:1876395-1876414 | MS.gene24255:CDS | 45.0% | |
| CTTAACTGAGTGGCTCACTT+TGG | + | chr1.1:1873996-1874015 | MS.gene24255:intron | 45.0% | |
| GCATAGAGAAATCCTGAAGG+GGG | + | chr1.1:1875698-1875717 | MS.gene24255:intron | 45.0% | |
| GGGGTAGACCTCATAGTAAT+GGG | + | chr1.1:1875380-1875399 | MS.gene24255:intron | 45.0% | |
| GTACAGAAGTTGTCCAACCT+GGG | + | chr1.1:1874546-1874565 | MS.gene24255:intron | 45.0% | |
| ! | AGTATTTTGCCTACCCAGGT+TGG | - | chr1.1:1874562-1874581 | None:intergenic | 45.0% |
| ! | GCCTTTCCACATTTTGGATC+AGG | + | chr1.1:1876619-1876638 | MS.gene24255:CDS | 45.0% |
| ! | TGGTGAGCCTTTCCACATTT+TGG | + | chr1.1:1876613-1876632 | MS.gene24255:CDS | 45.0% |
| !! | CAAAAGTATTAGCCCCCTTC+AGG | - | chr1.1:1875713-1875732 | None:intergenic | 45.0% |
| !! | CCTTTTGGTCTTTTTTGCGG+GGG | + | chr1.1:1874521-1874540 | MS.gene24255:intron | 45.0% |
| !! | TAGTGGTCTATCGACTCGAT+AGG | + | chr1.1:1875575-1875594 | MS.gene24255:intron | 45.0% |
| !!! | GAACCACGTGAGTTTTGGAT+CGG | - | chr1.1:1873538-1873557 | None:intergenic | 45.0% |
| AAAGTTGGACAGGGTGGGTA+TGG | + | chr1.1:1876167-1876186 | MS.gene24255:intron | 50.0% | |
| AAGTTGGACAGGGTGGGTAT+GGG | + | chr1.1:1876168-1876187 | MS.gene24255:intron | 50.0% | |
| ACAGACACTAAGGACCCGTT+TGG | - | chr1.1:1874273-1874292 | None:intergenic | 50.0% | |
| ACCAACTCCAACCACAGCAA+TGG | - | chr1.1:1876597-1876616 | None:intergenic | 50.0% | |
| ACCATTGCTGTGGTTGGAGT+TGG | + | chr1.1:1876593-1876612 | MS.gene24255:CDS | 50.0% | |
| AGAAGTTGTCCAACCTGGGT+AGG | + | chr1.1:1874550-1874569 | MS.gene24255:intron | 50.0% | |
| AGGTTTGCACTCAGCGATCA+TGG | + | chr1.1:1876315-1876334 | MS.gene24255:intron | 50.0% | |
| CACTAAGGACCCGTTTGGAT+TGG | - | chr1.1:1874268-1874287 | None:intergenic | 50.0% | |
| CCCCCGCAAAAAAGACCAAA+AGG | - | chr1.1:1874524-1874543 | None:intergenic | 50.0% | |
| CCTTGCAAGGTGAAAAGCTC+AGG | + | chr1.1:1876558-1876577 | MS.gene24255:CDS | 50.0% | |
| CGACGTAACAACATGGTCAC+CGG | + | chr1.1:1873445-1873464 | MS.gene24255:CDS | 50.0% | |
| CGCTTGGGCAGTTGTAATAG+AGG | - | chr1.1:1876397-1876416 | None:intergenic | 50.0% | |
| CGGTGACCATGTTGTTACGT+CGG | - | chr1.1:1873447-1873466 | None:intergenic | 50.0% | |
| CTGAACGACGAGTCTACCAA+CGG | - | chr1.1:1873735-1873754 | None:intergenic | 50.0% | |
| CTTCTTGACAAACACGACGG+AGG | - | chr1.1:1874945-1874964 | None:intergenic | 50.0% | |
| GCCATGGAAGCAGTTAAGCA+AGG | + | chr1.1:1873494-1873513 | MS.gene24255:CDS | 50.0% | |
| GCTTCTGGTGCAGATCAAAG+TGG | + | chr1.1:1876746-1876765 | MS.gene24255:CDS | 50.0% | |
| GGTACAGAAGTTGTCCAACC+TGG | + | chr1.1:1874545-1874564 | MS.gene24255:intron | 50.0% | |
| GTATGCACCATTGCTGTGGT+TGG | + | chr1.1:1876587-1876606 | MS.gene24255:CDS | 50.0% | |
| GTCTCTGTTAGTGACTGTGG+TGG | + | chr1.1:1874676-1874695 | MS.gene24255:intron | 50.0% | |
| TATGAATCTCCGCTTCCCGT+TGG | + | chr1.1:1873716-1873735 | MS.gene24255:CDS | 50.0% | |
| TCTCCATTGGAGAACCACCT+TGG | - | chr1.1:1876787-1876806 | None:intergenic | 50.0% | |
| TCTCCGATCCAAAACTCACG+TGG | + | chr1.1:1873532-1873551 | MS.gene24255:CDS | 50.0% | |
| TGAACGACGAGTCTACCAAC+GGG | - | chr1.1:1873734-1873753 | None:intergenic | 50.0% | |
| TGACCAAGGTGGTTCTCCAA+TGG | + | chr1.1:1876781-1876800 | MS.gene24255:CDS | 50.0% | |
| TTTGATCAGATCTTCCCGGG+AGG | - | chr1.1:1876513-1876532 | None:intergenic | 50.0% | |
| ! | CCTGAGCTTTTCACCTTGCA+AGG | - | chr1.1:1876561-1876580 | None:intergenic | 50.0% |
| !! | AGATCAAAGTGGTGCTGGTG+GGG | + | chr1.1:1876757-1876776 | MS.gene24255:CDS | 50.0% |
| !! | CAGATCAAAGTGGTGCTGGT+GGG | + | chr1.1:1876756-1876775 | MS.gene24255:CDS | 50.0% |
| !! | CGATCATGGAAGCGTCCTTA+TGG | + | chr1.1:1876329-1876348 | MS.gene24255:CDS | 50.0% |
| !!! | GGTTTTGAGGAGGGAAACAG+TGG | + | chr1.1:1875531-1875550 | MS.gene24255:intron | 50.0% |
| !!! | TTTGGTCTTTTTTGCGGGGG+AGG | + | chr1.1:1874524-1874543 | MS.gene24255:intron | 50.0% |
| ACAACTTCACAGCCTCCTCC+CGG | + | chr1.1:1876495-1876514 | MS.gene24255:CDS | 55.0% | |
| ACGAGTCTACCAACGGGAAG+CGG | - | chr1.1:1873728-1873747 | None:intergenic | 55.0% | |
| ACGGGAAAGAACACGGCCAT+CGG | - | chr1.1:1873660-1873679 | None:intergenic | 55.0% | |
| AGTTGGACAGGGTGGGTATG+GGG | + | chr1.1:1876169-1876188 | MS.gene24255:intron | 55.0% | |
| CGTAACAACATGGTCACCGG+CGG | + | chr1.1:1873448-1873467 | MS.gene24255:CDS | 55.0% | |
| CTCCGTATGCACCATTGCTG+TGG | + | chr1.1:1876583-1876602 | MS.gene24255:CDS | 55.0% | |
| CTTCCAGGTGGAATACGCCA+TGG | + | chr1.1:1873478-1873497 | MS.gene24255:CDS | 55.0% | |
| CTTCCATGGCGTATTCCACC+TGG | - | chr1.1:1873484-1873503 | None:intergenic | 55.0% | |
| GAAGTAGGGAGACTGGTGTG+CGG | + | chr1.1:1875119-1875138 | MS.gene24255:intron | 55.0% | |
| GCAACTAGGGAGTCCTTGCA+AGG | + | chr1.1:1876545-1876564 | MS.gene24255:CDS | 55.0% | |
| GGTGCAGATCAAAGTGGTGC+TGG | + | chr1.1:1876752-1876771 | MS.gene24255:CDS | 55.0% | |
| GTAACAACATGGTCACCGGC+GGG | + | chr1.1:1873449-1873468 | MS.gene24255:CDS | 55.0% | |
| TCGCCGATAAGGCTCAGGTT+AGG | + | chr1.1:1873756-1873775 | MS.gene24255:intron | 55.0% | |
| TGCACCAGAAGCCTGATCTG+TGG | - | chr1.1:1876738-1876757 | None:intergenic | 55.0% | |
| ! | CGCGAGAACCACGTGAGTTT+TGG | - | chr1.1:1873543-1873562 | None:intergenic | 55.0% |
| ! | GCAGATCAAAGTGGTGCTGG+TGG | + | chr1.1:1876755-1876774 | MS.gene24255:CDS | 55.0% |
| ! | GGCGTTGGACTTCTAGTAGC+TGG | + | chr1.1:1876350-1876369 | MS.gene24255:CDS | 55.0% |
| !! | TGGAAGCGTCCTTATGGCGT+TGG | + | chr1.1:1876335-1876354 | MS.gene24255:CDS | 55.0% |
| ACCTGGAAGAGTCTTCCCGC+CGG | - | chr1.1:1873467-1873486 | None:intergenic | 60.0% | |
| AGCTGCACCTGCTGAACCTG+AGG | + | chr1.1:1876691-1876710 | MS.gene24255:CDS | 60.0% | |
| CAACTTCACAGCCTCCTCCC+GGG | + | chr1.1:1876496-1876515 | MS.gene24255:CDS | 60.0% | |
| CATATCGGCGTTGCCATCGC+CGG | + | chr1.1:1873626-1873645 | MS.gene24255:CDS | 60.0% | |
| CGTCGTTCAGCTCGCCGATA+AGG | + | chr1.1:1873745-1873764 | MS.gene24255:CDS | 60.0% | |
| GATCAGATCTTCCCGGGAGG+AGG | - | chr1.1:1876510-1876529 | None:intergenic | 60.0% | |
| GCAGGATGCTGCCACAGATC+AGG | + | chr1.1:1876724-1876743 | MS.gene24255:CDS | 60.0% | |
| GCTGCCACAGATCAGGCTTC+TGG | + | chr1.1:1876731-1876750 | MS.gene24255:CDS | 60.0% | |
| GGAAAGAACACGGCCATCGG+CGG | - | chr1.1:1873657-1873676 | None:intergenic | 60.0% | |
| GTTGGACAGGGTGGGTATGG+GGG | + | chr1.1:1876170-1876189 | MS.gene24255:intron | 60.0% | |
| TCAGCTCGCCGATAAGGCTC+AGG | + | chr1.1:1873751-1873770 | MS.gene24255:CDS | 60.0% | |
| TTGGACAGGGTGGGTATGGG+GGG | + | chr1.1:1876171-1876190 | MS.gene24255:intron | 60.0% | |
| ACCGGCGGGAAGACTCTTCC+AGG | + | chr1.1:1873463-1873482 | MS.gene24255:CDS | 65.0% | |
| ACCTGAGGCTGCAGCTGAGC+AGG | + | chr1.1:1876706-1876725 | MS.gene24255:CDS | 65.0% | |
| GCTGCAGCCTCAGGTTCAGC+AGG | - | chr1.1:1876701-1876720 | None:intergenic | 65.0% | |
| GGCGGGAAGACTCTTCCAGG+TGG | + | chr1.1:1873466-1873485 | MS.gene24255:CDS | 65.0% | |
| TCCTGCTCAGCTGCAGCCTC+AGG | - | chr1.1:1876710-1876729 | None:intergenic | 65.0% | |
| TGGACAGGGTGGGTATGGGG+GGG | + | chr1.1:1876172-1876191 | MS.gene24255:intron | 65.0% | |
| ACGGCCATCGGCGGTGAGAC+CGG | - | chr1.1:1873648-1873667 | None:intergenic | 70.0% | |
| ATCGCCGGTCTCACCGCCGA+TGG | + | chr1.1:1873641-1873660 | MS.gene24255:CDS | 70.0% | |
| ATCGGCGGTGAGACCGGCGA+TGG | - | chr1.1:1873642-1873661 | None:intergenic | 70.0% | |
| GCTGGTGGGGCTGACCAAGG+TGG | + | chr1.1:1876770-1876789 | MS.gene24255:CDS | 70.0% | |
| !! | GGTGCTGGTGGGGCTGACCA+AGG | + | chr1.1:1876767-1876786 | MS.gene24255:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 1873422 | 1876811 | 1873422 | ID=MS.gene24255 |
| chr1.1 | mRNA | 1873422 | 1876811 | 1873422 | ID=MS.gene24255.t1;Parent=MS.gene24255 |
| chr1.1 | exon | 1873422 | 1873772 | 1873422 | ID=MS.gene24255.t1.exon1;Parent=MS.gene24255.t1 |
| chr1.1 | CDS | 1873422 | 1873772 | 1873422 | ID=cds.MS.gene24255.t1;Parent=MS.gene24255.t1 |
| chr1.1 | exon | 1876317 | 1876811 | 1876317 | ID=MS.gene24255.t1.exon2;Parent=MS.gene24255.t1 |
| chr1.1 | CDS | 1876317 | 1876811 | 1876317 | ID=cds.MS.gene24255.t1;Parent=MS.gene24255.t1 |
| Gene Sequence |
| Protein sequence |
