Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90698.t1 | XP_013466130.1 | 100 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 3.20E-133 | 484.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90698.t1 | P34066 | 85.9 | 241 | 34 | 0 | 1 | 241 | 1 | 241 | 8.5e-119 | 427.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90698.t1 | I3RZQ6 | 100.0 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 2.3e-133 | 484.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene90698 | 0.841549 | 4.44E-58 | -1.69E-46 |
| MS.gene051003 | MS.gene90698 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene90698 | 0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene90698 | 0.827759 | 1.31E-54 | -1.69E-46 |
| MS.gene051748 | MS.gene90698 | 0.80415 | 2.48E-49 | -1.69E-46 |
| MS.gene051756 | MS.gene90698 | 0.842952 | 1.89E-58 | -1.69E-46 |
| MS.gene051809 | MS.gene90698 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene051850 | MS.gene90698 | 0.825321 | 5.00E-54 | -1.69E-46 |
| MS.gene051903 | MS.gene90698 | 0.81247 | 4.17E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene90698 | 0.821969 | 3.04E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene90698 | 0.80721 | 5.65E-50 | -1.69E-46 |
| MS.gene055424 | MS.gene90698 | 0.812646 | 3.82E-51 | -1.69E-46 |
| MS.gene056097 | MS.gene90698 | 0.801375 | 9.28E-49 | -1.69E-46 |
| MS.gene056992 | MS.gene90698 | 0.848423 | 6.19E-60 | -1.69E-46 |
| MS.gene057094 | MS.gene90698 | 0.869131 | 3.90E-66 | -1.69E-46 |
| MS.gene057234 | MS.gene90698 | 0.80692 | 6.51E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene90698 | 0.804842 | 1.78E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene90698 | 0.80275 | 4.84E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene90698 | 0.814238 | 1.71E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90698.t1 | MTR_1g022410 | 97.887 | 284 | 3 | 1 | 1 | 281 | 1 | 284 | 0.0 | 573 |
| MS.gene90698.t1 | MTR_4g012740 | 78.571 | 322 | 25 | 3 | 1 | 281 | 232 | 550 | 2.45e-163 | 465 |
| MS.gene90698.t1 | MTR_4g012740 | 64.773 | 88 | 16 | 2 | 1 | 73 | 1 | 88 | 1.48e-24 | 103 |
| MS.gene90698.t1 | MTR_4g012740 | 63.636 | 88 | 17 | 2 | 1 | 73 | 78 | 165 | 2.13e-24 | 102 |
| MS.gene90698.t1 | MTR_4g012740 | 63.636 | 88 | 17 | 2 | 1 | 73 | 155 | 242 | 2.13e-24 | 102 |
| MS.gene90698.t1 | MTR_4g057090 | 70.175 | 285 | 55 | 4 | 1 | 281 | 83 | 341 | 6.53e-124 | 357 |
| MS.gene90698.t1 | MTR_3g113730 | 87.805 | 164 | 18 | 1 | 118 | 281 | 4 | 165 | 3.77e-103 | 298 |
| MS.gene90698.t1 | MTR_1g112250 | 45.902 | 183 | 94 | 2 | 1 | 178 | 3 | 185 | 7.61e-47 | 157 |
| MS.gene90698.t1 | MTR_7g070070 | 38.785 | 214 | 125 | 3 | 5 | 214 | 4 | 215 | 3.96e-43 | 147 |
| MS.gene90698.t1 | MTR_5g016590 | 38.785 | 214 | 125 | 3 | 5 | 214 | 4 | 215 | 6.34e-43 | 147 |
| MS.gene90698.t1 | MTR_0167s0060 | 35.111 | 225 | 141 | 3 | 1 | 223 | 1 | 222 | 2.17e-41 | 143 |
| MS.gene90698.t1 | MTR_6g024135 | 40.838 | 191 | 108 | 3 | 6 | 193 | 8 | 196 | 1.02e-38 | 136 |
| MS.gene90698.t1 | MTR_2g060830 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 1.62e-38 | 135 |
| MS.gene90698.t1 | MTR_8g464460 | 35.217 | 230 | 143 | 5 | 6 | 230 | 9 | 237 | 2.25e-38 | 135 |
| MS.gene90698.t1 | MTR_8g075320 | 37.736 | 212 | 123 | 4 | 5 | 210 | 3 | 211 | 8.29e-38 | 134 |
| MS.gene90698.t1 | MTR_2g016050 | 35.681 | 213 | 128 | 4 | 4 | 210 | 2 | 211 | 4.33e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90698.t1 | AT1G47250 | 78.445 | 283 | 53 | 2 | 1 | 281 | 1 | 277 | 6.24e-160 | 446 |
| MS.gene90698.t1 | AT5G42790 | 86.134 | 238 | 33 | 0 | 1 | 238 | 1 | 238 | 6.61e-159 | 443 |
| MS.gene90698.t1 | AT1G53850 | 38.819 | 237 | 135 | 4 | 1 | 232 | 3 | 234 | 2.41e-46 | 155 |
| MS.gene90698.t1 | AT1G53850 | 38.819 | 237 | 135 | 4 | 1 | 232 | 3 | 234 | 2.41e-46 | 155 |
| MS.gene90698.t1 | AT3G14290 | 45.355 | 183 | 95 | 2 | 1 | 178 | 3 | 185 | 2.44e-46 | 155 |
| MS.gene90698.t1 | AT3G22110 | 36.017 | 236 | 141 | 4 | 5 | 232 | 4 | 237 | 2.43e-43 | 148 |
| MS.gene90698.t1 | AT1G16470 | 36.444 | 225 | 138 | 3 | 1 | 223 | 1 | 222 | 2.39e-40 | 140 |
| MS.gene90698.t1 | AT1G16470 | 36.444 | 225 | 138 | 3 | 1 | 223 | 1 | 222 | 2.39e-40 | 140 |
| MS.gene90698.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene90698.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene90698.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene90698.t1 | AT5G35590 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 1.95e-38 | 135 |
| MS.gene90698.t1 | AT5G66140 | 38.208 | 212 | 122 | 4 | 5 | 210 | 3 | 211 | 4.08e-37 | 132 |
| MS.gene90698.t1 | AT2G05840 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 4.32e-37 | 132 |
| MS.gene90698.t1 | AT3G51260 | 37.264 | 212 | 124 | 4 | 5 | 210 | 3 | 211 | 5.50e-36 | 129 |
| MS.gene90698.t1 | AT3G51260 | 37.264 | 212 | 124 | 4 | 5 | 210 | 3 | 211 | 6.42e-36 | 129 |
| MS.gene90698.t1 | AT2G05840 | 36.181 | 199 | 123 | 3 | 6 | 200 | 9 | 207 | 1.40e-35 | 127 |
| MS.gene90698.t1 | AT2G27020 | 37.895 | 190 | 115 | 2 | 6 | 193 | 8 | 196 | 8.12e-35 | 126 |
| MS.gene90698.t1 | AT2G05840 | 36.170 | 188 | 116 | 3 | 6 | 189 | 9 | 196 | 1.18e-33 | 122 |
| MS.gene90698.t1 | AT2G27020 | 37.895 | 190 | 115 | 2 | 6 | 193 | 110 | 298 | 1.77e-33 | 125 |
| MS.gene90698.t1 | AT4G15165 | 33.654 | 208 | 87 | 7 | 5 | 204 | 4 | 168 | 2.35e-25 | 100 |
Find 83 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGAGCCTTTCCACATTT+TGG | 0.215333 | 1.4:+1863039 | MS.gene90698:CDS |
| CGCGAGAACCACGTGAGTTT+TGG | 0.220139 | 1.4:-1859967 | None:intergenic |
| ACAAGCTGCAAAGACATATT+TGG | 0.303194 | 1.4:+1862886 | MS.gene90698:CDS |
| TCCTGCTCAGCTGCAGCCTC+AGG | 0.321152 | 1.4:-1863133 | None:intergenic |
| TAACCTAACCTGAGCCTTAT+CGG | 0.340591 | 1.4:-1860186 | None:intergenic |
| GCTGCCACAGATCAGGCTTC+TGG | 0.352014 | 1.4:+1863157 | MS.gene90698:CDS |
| CGATCATGGAAGCGTCCTTA+TGG | 0.372743 | 1.4:+1862755 | MS.gene90698:CDS |
| ATGAGAAGATAGTTCAGAAT+TGG | 0.382855 | 1.4:-1860003 | None:intergenic |
| GTAGCTGGATTAGATGAATC+AGG | 0.390011 | 1.4:+1862791 | MS.gene90698:CDS |
| GGCGTTGGACTTCTAGTAGC+TGG | 0.403744 | 1.4:+1862776 | MS.gene90698:CDS |
| CGCTTGGGCAGTTGTAATAG+AGG | 0.407257 | 1.4:-1862820 | None:intergenic |
| GCTGCAGCCTCAGGTTCAGC+AGG | 0.411570 | 1.4:-1863124 | None:intergenic |
| ACCTGAGGCTGCAGCTGAGC+AGG | 0.426509 | 1.4:+1863132 | MS.gene90698:CDS |
| TCATCAGAAGAAGATCTTCA+AGG | 0.432131 | 1.4:+1860022 | MS.gene90698:CDS |
| GCAGGATGCTGCCACAGATC+AGG | 0.446173 | 1.4:+1863150 | MS.gene90698:CDS |
| TTAAATTATCAAATCTCCAT+TGG | 0.446472 | 1.4:-1863223 | None:intergenic |
| AAGCAAGGTTCAGCAGCAAT+AGG | 0.446969 | 1.4:+1859936 | MS.gene90698:CDS |
| ACCGGCGGGAAGACTCTTCC+AGG | 0.447398 | 1.4:+1859890 | MS.gene90698:CDS |
| CATCTTTGATCAGATCTTCC+CGG | 0.448900 | 1.4:-1862940 | None:intergenic |
| CAGATCAAAGTGGTGCTGGT+GGG | 0.452356 | 1.4:+1863182 | MS.gene90698:CDS |
| CCTTGCAAGGTGAAAAGCTC+AGG | 0.463589 | 1.4:+1862984 | MS.gene90698:CDS |
| GCATTCAGATCTCATGTAAC+GGG | 0.468182 | 1.4:-1860102 | None:intergenic |
| GATCAGATCTTCCCGGGAGG+AGG | 0.468370 | 1.4:-1862933 | None:intergenic |
| ACGGCCATCGGCGGTGAGAC+CGG | 0.470971 | 1.4:-1860072 | None:intergenic |
| GGTGCTGGTGGGGCTGACCA+AGG | 0.471608 | 1.4:+1863193 | MS.gene90698:CDS |
| GCAGATCAAAGTGGTGCTGG+TGG | 0.482449 | 1.4:+1863181 | MS.gene90698:CDS |
| CGTCGTTCAGCTCGCCGATA+AGG | 0.485800 | 1.4:+1860172 | MS.gene90698:CDS |
| ATTCAAAATAGTTTCCGCTT+GGG | 0.489662 | 1.4:-1862835 | None:intergenic |
| ACTAGAAGTCCAACGCCATA+AGG | 0.491926 | 1.4:-1862770 | None:intergenic |
| AGGTTTGCACTCAGCGATCA+TGG | 0.494067 | 1.4:+1862741 | MS.gene90698:intron |
| ACAACTTCACAGCCTCCTCC+CGG | 0.497935 | 1.4:+1862921 | MS.gene90698:CDS |
| GAATATCAGGCATTTGCAAT+CGG | 0.498552 | 1.4:+1862854 | MS.gene90698:CDS |
| CTTCCATGGCGTATTCCACC+TGG | 0.500589 | 1.4:-1859908 | None:intergenic |
| TATTCAAAATAGTTTCCGCT+TGG | 0.508568 | 1.4:-1862836 | None:intergenic |
| ACCATTGCTGTGGTTGGAGT+TGG | 0.514251 | 1.4:+1863019 | MS.gene90698:CDS |
| TTCAAGGTTGATGATCATAT+CGG | 0.515192 | 1.4:+1860038 | MS.gene90698:CDS |
| ATCTTTGATCAGATCTTCCC+GGG | 0.521887 | 1.4:-1862939 | None:intergenic |
| AAGATGCACTCATTGCAACT+AGG | 0.529448 | 1.4:+1862957 | MS.gene90698:CDS |
| AGATCAAAGTGGTGCTGGTG+GGG | 0.531118 | 1.4:+1863183 | MS.gene90698:CDS |
| GGTGCAGATCAAAGTGGTGC+TGG | 0.531835 | 1.4:+1863178 | MS.gene90698:CDS |
| TGGAAGCGTCCTTATGGCGT+TGG | 0.534162 | 1.4:+1862761 | MS.gene90698:CDS |
| AACCACAGCAATGGTGCATA+CGG | 0.536605 | 1.4:-1863011 | None:intergenic |
| CTCTATTACAACTGCCCAAG+CGG | 0.540260 | 1.4:+1862821 | MS.gene90698:CDS |
| ACGAGTCTACCAACGGGAAG+CGG | 0.541672 | 1.4:-1860152 | None:intergenic |
| AGATGCACTCATTGCAACTA+GGG | 0.552459 | 1.4:+1862958 | MS.gene90698:CDS |
| TCAGCTCGCCGATAAGGCTC+AGG | 0.552948 | 1.4:+1860178 | MS.gene90698:CDS |
| CATATCGGCGTTGCCATCGC+CGG | 0.553468 | 1.4:+1860053 | MS.gene90698:CDS |
| GTATGCACCATTGCTGTGGT+TGG | 0.557714 | 1.4:+1863013 | MS.gene90698:CDS |
| ATCGCCGGTCTCACCGCCGA+TGG | 0.557766 | 1.4:+1860068 | MS.gene90698:CDS |
| ACCTTGCTTAACTGCTTCCA+TGG | 0.560856 | 1.4:-1859922 | None:intergenic |
| TGCATTCAGATCTCATGTAA+CGG | 0.564752 | 1.4:-1860103 | None:intergenic |
| CGACGTAACAACATGGTCAC+CGG | 0.568536 | 1.4:+1859872 | MS.gene90698:CDS |
| TGAACGACGAGTCTACCAAC+GGG | 0.572203 | 1.4:-1860158 | None:intergenic |
| TAGCTGGATTAGATGAATCA+GGG | 0.572392 | 1.4:+1862792 | MS.gene90698:CDS |
| ACGGGAAAGAACACGGCCAT+CGG | 0.576909 | 1.4:-1860084 | None:intergenic |
| CAGTTTCCTGATCCAAAATG+TGG | 0.582560 | 1.4:-1863051 | None:intergenic |
| TATGAATCTCCGCTTCCCGT+TGG | 0.585267 | 1.4:+1860143 | MS.gene90698:CDS |
| AGCTGCACCTGCTGAACCTG+AGG | 0.586152 | 1.4:+1863117 | MS.gene90698:CDS |
| CAACTTCACAGCCTCCTCCC+GGG | 0.586785 | 1.4:+1862922 | MS.gene90698:CDS |
| TGACCAAGGTGGTTCTCCAA+TGG | 0.586988 | 1.4:+1863207 | MS.gene90698:CDS |
| ATCGGCGGTGAGACCGGCGA+TGG | 0.592757 | 1.4:-1860066 | None:intergenic |
| TCCTGATCCAAAATGTGGAA+AGG | 0.593184 | 1.4:-1863046 | None:intergenic |
| ACCAACTCCAACCACAGCAA+TGG | 0.594452 | 1.4:-1863020 | None:intergenic |
| GCTGGTGGGGCTGACCAAGG+TGG | 0.603851 | 1.4:+1863196 | MS.gene90698:CDS |
| CTTCCAGGTGGAATACGCCA+TGG | 0.612270 | 1.4:+1859905 | MS.gene90698:CDS |
| CTCCGTATGCACCATTGCTG+TGG | 0.615712 | 1.4:+1863009 | MS.gene90698:CDS |
| GCAACTAGGGAGTCCTTGCA+AGG | 0.618439 | 1.4:+1862971 | MS.gene90698:CDS |
| TCTCCATTGGAGAACCACCT+TGG | 0.619130 | 1.4:-1863210 | None:intergenic |
| ACCTGGAAGAGTCTTCCCGC+CGG | 0.625765 | 1.4:-1859891 | None:intergenic |
| GTAACAACATGGTCACCGGC+GGG | 0.626802 | 1.4:+1859876 | MS.gene90698:CDS |
| CGTAACAACATGGTCACCGG+CGG | 0.638962 | 1.4:+1859875 | MS.gene90698:CDS |
| GGAAAGAACACGGCCATCGG+CGG | 0.645115 | 1.4:-1860081 | None:intergenic |
| TGCACCAGAAGCCTGATCTG+TGG | 0.645294 | 1.4:-1863161 | None:intergenic |
| TCATGTAACGGGAAAGAACA+CGG | 0.645339 | 1.4:-1860091 | None:intergenic |
| CTGAACGACGAGTCTACCAA+CGG | 0.653690 | 1.4:-1860159 | None:intergenic |
| ACGATACCGACGTAACAACA+TGG | 0.654506 | 1.4:+1859865 | MS.gene90698:CDS |
| GCCATGGAAGCAGTTAAGCA+AGG | 0.656151 | 1.4:+1859921 | MS.gene90698:CDS |
| AGCTGGATTAGATGAATCAG+GGG | 0.660204 | 1.4:+1862793 | MS.gene90698:CDS |
| CGGTGACCATGTTGTTACGT+CGG | 0.692398 | 1.4:-1859871 | None:intergenic |
| GCTTCTGGTGCAGATCAAAG+TGG | 0.697173 | 1.4:+1863172 | MS.gene90698:CDS |
| GGCGGGAAGACTCTTCCAGG+TGG | 0.706418 | 1.4:+1859893 | MS.gene90698:CDS |
| TCTCCGATCCAAAACTCACG+TGG | 0.728289 | 1.4:+1859959 | MS.gene90698:CDS |
| TTTGATCAGATCTTCCCGGG+AGG | 0.729135 | 1.4:-1862936 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTAAATTAAGTAATTTTAA+TGG | + | chr1.4:1860310-1860329 | MS.gene90698:intron | 10.0% |
| !! | AAATAATAACAAAATCAAAC+AGG | - | chr1.4:1861044-1861063 | None:intergenic | 15.0% |
| !! | ATTCAATAAACTAAAACATT+TGG | + | chr1.4:1862505-1862524 | MS.gene90698:intron | 15.0% |
| !! | TTCTCTAATGTTTATTATAT+AGG | + | chr1.4:1860873-1860892 | MS.gene90698:intron | 15.0% |
| !!! | ACTATTTTGTATACTTAATA+TGG | + | chr1.4:1861523-1861542 | MS.gene90698:intron | 15.0% |
| !! | AAACATTAGAGAATACATTT+CGG | - | chr1.4:1860866-1860885 | None:intergenic | 20.0% |
| !! | AAATACAGTGTTAACAAAAA+GGG | - | chr1.4:1860458-1860477 | None:intergenic | 20.0% |
| !! | ATATTACATGGAAAAGAATA+AGG | + | chr1.4:1862647-1862666 | MS.gene90698:intron | 20.0% |
| !! | CAAAATTACATCATAAATAC+TGG | - | chr1.4:1862715-1862734 | None:intergenic | 20.0% |
| !! | TATATAGAAACAGCATAAAT+AGG | - | chr1.4:1862451-1862470 | None:intergenic | 20.0% |
| !! | TTTAACTCAGTAATTCAATT+AGG | + | chr1.4:1860288-1860307 | MS.gene90698:intron | 20.0% |
| !!! | ATTTATGATGTAATTTTGAG+TGG | + | chr1.4:1862717-1862736 | MS.gene90698:intron | 20.0% |
| !!! | GTGTTTTATTAATAGAAAGT+TGG | + | chr1.4:1862578-1862597 | MS.gene90698:intron | 20.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr1.4:1860681-1860700 | MS.gene90698:intron | 25.0% |
| ! | AAAATACTATGATGCTTCTA+TGG | + | chr1.4:1861000-1861019 | MS.gene90698:intron | 25.0% |
| ! | ACACACATTTATATACTTCT+GGG | - | chr1.4:1861449-1861468 | None:intergenic | 25.0% |
| ! | AGGTACAAAAATTATTTCAC+AGG | - | chr1.4:1861351-1861370 | None:intergenic | 25.0% |
| ! | ATTTATATACTTCTGGGTAT+AGG | - | chr1.4:1861443-1861462 | None:intergenic | 25.0% |
| ! | CAAATACAGTGTTAACAAAA+AGG | - | chr1.4:1860459-1860478 | None:intergenic | 25.0% |
| ! | GTATACTTAATATGGAAGTA+GGG | + | chr1.4:1861531-1861550 | MS.gene90698:intron | 25.0% |
| ! | TAGTCGAGATTATTTACTTT+AGG | + | chr1.4:1860397-1860416 | MS.gene90698:intron | 25.0% |
| ! | TATTAATAGAAAGTTGGACA+GGG | + | chr1.4:1862584-1862603 | MS.gene90698:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr1.4:1860569-1860588 | MS.gene90698:intron | 25.0% |
| ! | TGTATACTTAATATGGAAGT+AGG | + | chr1.4:1861530-1861549 | MS.gene90698:intron | 25.0% |
| ! | TGTTCGGATTATTCTAATTA+GGG | + | chr1.4:1860235-1860254 | MS.gene90698:intron | 25.0% |
| ! | TTATTAATAGAAAGTTGGAC+AGG | + | chr1.4:1862583-1862602 | MS.gene90698:intron | 25.0% |
| ! | TTGAATGAATTAAATAGACC+AGG | - | chr1.4:1862491-1862510 | None:intergenic | 25.0% |
| ! | TTGTTCGGATTATTCTAATT+AGG | + | chr1.4:1860234-1860253 | MS.gene90698:intron | 25.0% |
| !! | AAACGTTTGAAACTATGTTT+AGG | + | chr1.4:1860825-1860844 | MS.gene90698:intron | 25.0% |
| !! | ATCATACTCTTTTTGATGTT+TGG | + | chr1.4:1861271-1861290 | MS.gene90698:intron | 25.0% |
| !! | ATTTGGTTAGTTAATCAACA+TGG | + | chr1.4:1862522-1862541 | MS.gene90698:intron | 25.0% |
| !! | GATTTGACTTAACTCTTATT+GGG | + | chr1.4:1862356-1862375 | MS.gene90698:intron | 25.0% |
| !! | TGATTTGACTTAACTCTTAT+TGG | + | chr1.4:1862355-1862374 | MS.gene90698:intron | 25.0% |
| !! | TTTCAGTTTTCAACTTTTGT+TGG | + | chr1.4:1860718-1860737 | MS.gene90698:intron | 25.0% |
| !!! | CATCAAAAAGAGTATGATTT+TGG | - | chr1.4:1861269-1861288 | None:intergenic | 25.0% |
| !!! | TAAAGTGTTAACAACACTTT+TGG | + | chr1.4:1862412-1862431 | MS.gene90698:intron | 25.0% |
| !!! | TGACAGTCATTTTGTATTTA+AGG | - | chr1.4:1861886-1861905 | None:intergenic | 25.0% |
| !!! | TGTAAATGTTGTTTTGATAG+TGG | + | chr1.4:1861624-1861643 | MS.gene90698:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr1.4:1860682-1860701 | MS.gene90698:intron | 30.0% | |
| AAACAGGTAAAAACGGAAAA+CGG | - | chr1.4:1860216-1860235 | None:intergenic | 30.0% | |
| ACGGTGTAGTTATTCAAATT+GGG | + | chr1.4:1861710-1861729 | MS.gene90698:intron | 30.0% | |
| ATAGTTACTATATGTGAACC+TGG | + | chr1.4:1862470-1862489 | MS.gene90698:intron | 30.0% | |
| ATCTTGTCTTGCATATTACA+TGG | + | chr1.4:1862635-1862654 | MS.gene90698:intron | 30.0% | |
| ATGAGAAGATAGTTCAGAAT+TGG | - | chr1.4:1860006-1860025 | None:intergenic | 30.0% | |
| ATTCAAAATAGTTTCCGCTT+GGG | - | chr1.4:1862838-1862857 | None:intergenic | 30.0% | |
| CACACACATTTATATACTTC+TGG | - | chr1.4:1861450-1861469 | None:intergenic | 30.0% | |
| CATATGATAGAGATTAGAGA+CGG | + | chr1.4:1861678-1861697 | MS.gene90698:intron | 30.0% | |
| GACAGTGATTAGAATGAAAT+GGG | + | chr1.4:1860478-1860497 | MS.gene90698:intron | 30.0% | |
| TAATTGTGATTGAGAGAAGA+TGG | + | chr1.4:1860774-1860793 | MS.gene90698:intron | 30.0% | |
| TACGGTGTAGTTATTCAAAT+TGG | + | chr1.4:1861709-1861728 | MS.gene90698:intron | 30.0% | |
| TATCTTACTTTCATTCTCTG+TGG | + | chr1.4:1861843-1861862 | MS.gene90698:intron | 30.0% | |
| TATTCAAAATAGTTTCCGCT+TGG | - | chr1.4:1862839-1862858 | None:intergenic | 30.0% | |
| TGACAGTGATTAGAATGAAA+TGG | + | chr1.4:1860477-1860496 | MS.gene90698:intron | 30.0% | |
| TGATTTACTTAGCATTGTAG+TGG | + | chr1.4:1861984-1862003 | MS.gene90698:intron | 30.0% | |
| TTAGAATAATCCGAACAAAC+AGG | - | chr1.4:1860232-1860251 | None:intergenic | 30.0% | |
| TTGAATGTCTTGAGAATTTG+AGG | + | chr1.4:1861062-1861081 | MS.gene90698:intron | 30.0% | |
| ! | CAGAAGTATATAAATGTGTG+TGG | + | chr1.4:1861448-1861467 | MS.gene90698:intron | 30.0% |
| ! | CTTTTTGATGTTTGGTTGTT+TGG | + | chr1.4:1861279-1861298 | MS.gene90698:intron | 30.0% |
| !! | ATCACTTTTGAGCTGTTATT+TGG | + | chr1.4:1861495-1861514 | MS.gene90698:intron | 30.0% |
| !! | ATCTAGAGGGAGTATATTTT+CGG | + | chr1.4:1860802-1860821 | MS.gene90698:intron | 30.0% |
| !! | CGGAAACTATTTTGAATATC+AGG | + | chr1.4:1862841-1862860 | MS.gene90698:CDS | 30.0% |
| !! | GATTTGATTTGTTATGCTTG+TGG | + | chr1.4:1860355-1860374 | MS.gene90698:intron | 30.0% |
| !! | GTATGATTTTGGCAAAATCA+CGG | - | chr1.4:1861258-1861277 | None:intergenic | 30.0% |
| !! | TAACTTGCTTGTAGAATAAC+TGG | + | chr1.4:1862277-1862296 | MS.gene90698:intron | 30.0% |
| !! | TGTTTTGTTACGATCCATTA+TGG | + | chr1.4:1861775-1861794 | MS.gene90698:intron | 30.0% |
| !! | TTCAAGGTTGATGATCATAT+CGG | + | chr1.4:1860038-1860057 | MS.gene90698:CDS | 30.0% |
| !!! | AATTGTAGCTAGGGTTTTTT+AGG | + | chr1.4:1860264-1860283 | MS.gene90698:intron | 30.0% |
| !!! | ATTGTAGCTAGGGTTTTTTA+GGG | + | chr1.4:1860265-1860284 | MS.gene90698:intron | 30.0% |
| !!! | GAGAATTTGAGGTTTTTAGT+TGG | + | chr1.4:1861073-1861092 | MS.gene90698:intron | 30.0% |
| !!! | TGATACTTTTGAGATTGTGA+GGG | + | chr1.4:1863087-1863106 | MS.gene90698:CDS | 30.0% |
| !!! | TTGATACTTTTGAGATTGTG+AGG | + | chr1.4:1863086-1863105 | MS.gene90698:CDS | 30.0% |
| AAACAGCATAAATAGGAGAG+GGG | - | chr1.4:1862444-1862463 | None:intergenic | 35.0% | |
| ACAAGCTGCAAAGACATATT+TGG | + | chr1.4:1862886-1862905 | MS.gene90698:CDS | 35.0% | |
| AGAAACAGCATAAATAGGAG+AGG | - | chr1.4:1862446-1862465 | None:intergenic | 35.0% | |
| AGTTCCGTTGACATTCATTA+GGG | - | chr1.4:1861749-1861768 | None:intergenic | 35.0% | |
| ATATACTTCTGGGTATAGGT+TGG | - | chr1.4:1861439-1861458 | None:intergenic | 35.0% | |
| ATCCATTATGGATGTTCTAG+GGG | + | chr1.4:1861787-1861806 | MS.gene90698:intron | 35.0% | |
| ATGCATAGAGAAATCCTGAA+GGG | + | chr1.4:1862122-1862141 | MS.gene90698:intron | 35.0% | |
| ATGTCATTCTTTGATGCATC+TGG | + | chr1.4:1861917-1861936 | MS.gene90698:intron | 35.0% | |
| CAAGAATAAGCCAATCCAAA+TGG | - | chr1.4:1860521-1860540 | None:intergenic | 35.0% | |
| CAGTGTTAACAAAAAGGGTT+TGG | - | chr1.4:1860453-1860472 | None:intergenic | 35.0% | |
| CGGTAAGTTTGACAAAATCA+CGG | + | chr1.4:1861187-1861206 | MS.gene90698:intron | 35.0% | |
| GAAAACTGAAACAGACACTA+AGG | - | chr1.4:1860709-1860728 | None:intergenic | 35.0% | |
| GAAACAGCATAAATAGGAGA+GGG | - | chr1.4:1862445-1862464 | None:intergenic | 35.0% | |
| GAATATCAGGCATTTGCAAT+CGG | + | chr1.4:1862854-1862873 | MS.gene90698:CDS | 35.0% | |
| GATCCATTATGGATGTTCTA+GGG | + | chr1.4:1861786-1861805 | MS.gene90698:intron | 35.0% | |
| GGTAAGTTTGACAAAATCAC+GGG | + | chr1.4:1861188-1861207 | MS.gene90698:intron | 35.0% | |
| TATGATGCTTCTATGGTGTT+TGG | + | chr1.4:1861007-1861026 | MS.gene90698:intron | 35.0% | |
| TCATCAGAAGAAGATCTTCA+AGG | + | chr1.4:1860022-1860041 | MS.gene90698:CDS | 35.0% | |
| TCCGAACAAACAGGTAAAAA+CGG | - | chr1.4:1860223-1860242 | None:intergenic | 35.0% | |
| TGCATTCAGATCTCATGTAA+CGG | - | chr1.4:1860106-1860125 | None:intergenic | 35.0% | |
| TGTAAGATTCAGTGTCCATT+TGG | + | chr1.4:1860503-1860522 | MS.gene90698:intron | 35.0% | |
| TTCACTTTCCCATTACTATG+AGG | - | chr1.4:1861817-1861836 | None:intergenic | 35.0% | |
| ! | AGTTTTCAACTTTTGTTGGC+TGG | + | chr1.4:1860722-1860741 | MS.gene90698:intron | 35.0% |
| ! | CTAATGACACGTTCTACTTT+TGG | - | chr1.4:1860919-1860938 | None:intergenic | 35.0% |
| ! | TAGCTGGATTAGATGAATCA+GGG | + | chr1.4:1862792-1862811 | MS.gene90698:CDS | 35.0% |
| ! | TCTTCTCTTTCAAGGTTTTG+AGG | + | chr1.4:1861944-1861963 | MS.gene90698:intron | 35.0% |
| !! | ACTTTAGGATCTTAACTGAG+TGG | + | chr1.4:1860412-1860431 | MS.gene90698:intron | 35.0% |
| !! | ATGATGTAATTTTGAGTGGC+AGG | + | chr1.4:1862721-1862740 | MS.gene90698:intron | 35.0% |
| !! | TCATTAGTTTCCTCTCCTTT+TGG | + | chr1.4:1860932-1860951 | MS.gene90698:intron | 35.0% |
| !! | TCCGTTTTTACCTGTTTGTT+CGG | + | chr1.4:1860219-1860238 | MS.gene90698:intron | 35.0% |
| !! | TCTCCTTTTGGTCTTTTTTG+CGG | + | chr1.4:1860944-1860963 | MS.gene90698:intron | 35.0% |
| !!! | AGGGTTTTGAAATTGTAGCT+AGG | + | chr1.4:1860254-1860273 | MS.gene90698:intron | 35.0% |
| !!! | GGGTTTTGAAATTGTAGCTA+GGG | + | chr1.4:1860255-1860274 | MS.gene90698:intron | 35.0% |
| AACAGCATAAATAGGAGAGG+GGG | - | chr1.4:1862443-1862462 | None:intergenic | 40.0% | |
| AAGATGCACTCATTGCAACT+AGG | + | chr1.4:1862957-1862976 | MS.gene90698:CDS | 40.0% | |
| AATAGAAAGTTGGACAGGGT+GGG | + | chr1.4:1862588-1862607 | MS.gene90698:intron | 40.0% | |
| AGAAGATGGAAGCAATCTAG+AGG | + | chr1.4:1860788-1860807 | MS.gene90698:intron | 40.0% | |
| AGATGCACTCATTGCAACTA+GGG | + | chr1.4:1862958-1862977 | MS.gene90698:CDS | 40.0% | |
| ATCTTTGATCAGATCTTCCC+GGG | - | chr1.4:1862942-1862961 | None:intergenic | 40.0% | |
| ATTGTCTAAACTGTCGTGAG+AGG | + | chr1.4:1862046-1862065 | MS.gene90698:intron | 40.0% | |
| CAGTTCCGTTGACATTCATT+AGG | - | chr1.4:1861750-1861769 | None:intergenic | 40.0% | |
| CAGTTTCCTGATCCAAAATG+TGG | - | chr1.4:1863054-1863073 | None:intergenic | 40.0% | |
| CATCTTTGATCAGATCTTCC+CGG | - | chr1.4:1862943-1862962 | None:intergenic | 40.0% | |
| CATGCATAGAGAAATCCTGA+AGG | + | chr1.4:1862121-1862140 | MS.gene90698:intron | 40.0% | |
| CGATCCATTATGGATGTTCT+AGG | + | chr1.4:1861785-1861804 | MS.gene90698:intron | 40.0% | |
| CGGTTGGCAAAAACTAAGTT+TGG | - | chr1.4:1861238-1861257 | None:intergenic | 40.0% | |
| CTTACTTTCATTCTCTGTGG+AGG | + | chr1.4:1861846-1861865 | MS.gene90698:intron | 40.0% | |
| GAAGATGGAAGCAATCTAGA+GGG | + | chr1.4:1860789-1860808 | MS.gene90698:intron | 40.0% | |
| GATTCAGTGTCCATTTGGAT+TGG | + | chr1.4:1860508-1860527 | MS.gene90698:intron | 40.0% | |
| GCAAAAAAGACCAAAAGGAG+AGG | - | chr1.4:1860945-1860964 | None:intergenic | 40.0% | |
| GCATTCAGATCTCATGTAAC+GGG | - | chr1.4:1860105-1860124 | None:intergenic | 40.0% | |
| TAATAGAAAGTTGGACAGGG+TGG | + | chr1.4:1862587-1862606 | MS.gene90698:intron | 40.0% | |
| TAATATGGAAGTAGGGAGAC+TGG | + | chr1.4:1861538-1861557 | MS.gene90698:intron | 40.0% | |
| TACCCCTAGAACATCCATAA+TGG | - | chr1.4:1861792-1861811 | None:intergenic | 40.0% | |
| TACGCTGTTGTGTTGTCTTA+TGG | + | chr1.4:1862216-1862235 | MS.gene90698:intron | 40.0% | |
| TCCTGATCCAAAATGTGGAA+AGG | - | chr1.4:1863049-1863068 | None:intergenic | 40.0% | |
| TGCACCCTAATGAATGTCAA+CGG | + | chr1.4:1861742-1861761 | MS.gene90698:intron | 40.0% | |
| TGCATAGAGAAATCCTGAAG+GGG | + | chr1.4:1862123-1862142 | MS.gene90698:intron | 40.0% | |
| TGTAGAATAACTGGCTGAAC+AGG | + | chr1.4:1862286-1862305 | MS.gene90698:intron | 40.0% | |
| TGTCTTCTTGACAAACACGA+CGG | - | chr1.4:1861374-1861393 | None:intergenic | 40.0% | |
| TGTTGTCTTATGGTGTGAAG+TGG | + | chr1.4:1862226-1862245 | MS.gene90698:intron | 40.0% | |
| TTAGAGACGGAGTTAGACTA+CGG | + | chr1.4:1861691-1861710 | MS.gene90698:intron | 40.0% | |
| ! | AGCTGGATTAGATGAATCAG+GGG | + | chr1.4:1862793-1862812 | MS.gene90698:CDS | 40.0% |
| ! | GTAGCTGGATTAGATGAATC+AGG | + | chr1.4:1862791-1862810 | MS.gene90698:CDS | 40.0% |
| ! | TAACCTAACCTGAGCCTTAT+CGG | - | chr1.4:1860189-1860208 | None:intergenic | 40.0% |
| ! | TCATAGTATTTTGCCTACCC+AGG | - | chr1.4:1860992-1861011 | None:intergenic | 40.0% |
| ! | TCATGTAACGGGAAAGAACA+CGG | - | chr1.4:1860094-1860113 | None:intergenic | 40.0% |
| ! | TTGTTGCTTGTGTGAAATGG+CGG | + | chr1.4:1861167-1861186 | MS.gene90698:intron | 40.0% |
| !! | CTCCTTTTGGTCTTTTTTGC+GGG | + | chr1.4:1860945-1860964 | MS.gene90698:intron | 40.0% |
| !! | GACTTGTTGCTTGTGTGAAA+TGG | + | chr1.4:1861164-1861183 | MS.gene90698:intron | 40.0% |
| !! | GATTTTGGCAAAATCACGGT+TGG | - | chr1.4:1861254-1861273 | None:intergenic | 40.0% |
| !! | TAGTGGTCTATCGACTTGAT+AGG | + | chr1.4:1862001-1862020 | MS.gene90698:intron | 40.0% |
| !! | TCCTTTTGGTCTTTTTTGCG+GGG | + | chr1.4:1860946-1860965 | MS.gene90698:intron | 40.0% |
| !!! | CTCTTTCAAGGTTTTGAGGA+GGG | + | chr1.4:1861948-1861967 | MS.gene90698:intron | 40.0% |
| !!! | GTTTGCTGACTCTTGTTTTC+TGG | + | chr1.4:1861137-1861156 | MS.gene90698:intron | 40.0% |
| !!! | TACTTTTGAGATTGTGAGGG+AGG | + | chr1.4:1863090-1863109 | MS.gene90698:CDS | 40.0% |
| !!! | TCTCTTTCAAGGTTTTGAGG+AGG | + | chr1.4:1861947-1861966 | MS.gene90698:intron | 40.0% |
| AAACTGTCGTGAGAGGCTAT+TGG | + | chr1.4:1862053-1862072 | MS.gene90698:intron | 45.0% | |
| AACCACAGCAATGGTGCATA+CGG | - | chr1.4:1863014-1863033 | None:intergenic | 45.0% | |
| AAGCAAGGTTCAGCAGCAAT+AGG | + | chr1.4:1859936-1859955 | MS.gene90698:CDS | 45.0% | |
| ACCTTGCTTAACTGCTTCCA+TGG | - | chr1.4:1859925-1859944 | None:intergenic | 45.0% | |
| ACGATACCGACGTAACAACA+TGG | + | chr1.4:1859865-1859884 | MS.gene90698:CDS | 45.0% | |
| ACTAGAAGTCCAACGCCATA+AGG | - | chr1.4:1862773-1862792 | None:intergenic | 45.0% | |
| AGGGGTAGACCTCATAGTAA+TGG | + | chr1.4:1861805-1861824 | MS.gene90698:intron | 45.0% | |
| AGTGTCTCTGTTAGTGACTG+TGG | + | chr1.4:1861099-1861118 | MS.gene90698:intron | 45.0% | |
| CTCTATTACAACTGCCCAAG+CGG | + | chr1.4:1862821-1862840 | MS.gene90698:CDS | 45.0% | |
| CTGGAACGTCTTCTCTTTCA+AGG | + | chr1.4:1861936-1861955 | MS.gene90698:intron | 45.0% | |
| CTTAACTGAGTGGCTCACTT+TGG | + | chr1.4:1860422-1860441 | MS.gene90698:intron | 45.0% | |
| GCATAGAGAAATCCTGAAGG+GGG | + | chr1.4:1862124-1862143 | MS.gene90698:intron | 45.0% | |
| GGGGTAGACCTCATAGTAAT+GGG | + | chr1.4:1861806-1861825 | MS.gene90698:intron | 45.0% | |
| GTACAGAAGTTGTCCAACCT+GGG | + | chr1.4:1860972-1860991 | MS.gene90698:intron | 45.0% | |
| ! | AGTATTTTGCCTACCCAGGT+TGG | - | chr1.4:1860988-1861007 | None:intergenic | 45.0% |
| ! | GCCTTTCCACATTTTGGATC+AGG | + | chr1.4:1863045-1863064 | MS.gene90698:CDS | 45.0% |
| ! | TGGTGAGCCTTTCCACATTT+TGG | + | chr1.4:1863039-1863058 | MS.gene90698:CDS | 45.0% |
| !! | CAAAAGTATTAGCCCCCTTC+AGG | - | chr1.4:1862139-1862158 | None:intergenic | 45.0% |
| !! | CCTTTTGGTCTTTTTTGCGG+GGG | + | chr1.4:1860947-1860966 | MS.gene90698:intron | 45.0% |
| !!! | GAACCACGTGAGTTTTGGAT+CGG | - | chr1.4:1859965-1859984 | None:intergenic | 45.0% |
| AAAGTTGGACAGGGTGGGTA+TGG | + | chr1.4:1862593-1862612 | MS.gene90698:intron | 50.0% | |
| AAGTTGGACAGGGTGGGTAT+GGG | + | chr1.4:1862594-1862613 | MS.gene90698:intron | 50.0% | |
| ACAGACACTAAGGACCCGTT+TGG | - | chr1.4:1860699-1860718 | None:intergenic | 50.0% | |
| ACCAACTCCAACCACAGCAA+TGG | - | chr1.4:1863023-1863042 | None:intergenic | 50.0% | |
| ACCATTGCTGTGGTTGGAGT+TGG | + | chr1.4:1863019-1863038 | MS.gene90698:CDS | 50.0% | |
| AGAAGTTGTCCAACCTGGGT+AGG | + | chr1.4:1860976-1860995 | MS.gene90698:intron | 50.0% | |
| AGGTTTGCACTCAGCGATCA+TGG | + | chr1.4:1862741-1862760 | MS.gene90698:intron | 50.0% | |
| CACTAAGGACCCGTTTGGAT+TGG | - | chr1.4:1860694-1860713 | None:intergenic | 50.0% | |
| CCCCCGCAAAAAAGACCAAA+AGG | - | chr1.4:1860950-1860969 | None:intergenic | 50.0% | |
| CCTTGCAAGGTGAAAAGCTC+AGG | + | chr1.4:1862984-1863003 | MS.gene90698:CDS | 50.0% | |
| CGACGTAACAACATGGTCAC+CGG | + | chr1.4:1859872-1859891 | MS.gene90698:CDS | 50.0% | |
| CGCTTGGGCAGTTGTAATAG+AGG | - | chr1.4:1862823-1862842 | None:intergenic | 50.0% | |
| CGGTGACCATGTTGTTACGT+CGG | - | chr1.4:1859874-1859893 | None:intergenic | 50.0% | |
| CTGAACGACGAGTCTACCAA+CGG | - | chr1.4:1860162-1860181 | None:intergenic | 50.0% | |
| CTTCTTGACAAACACGACGG+AGG | - | chr1.4:1861371-1861390 | None:intergenic | 50.0% | |
| GCCATGGAAGCAGTTAAGCA+AGG | + | chr1.4:1859921-1859940 | MS.gene90698:CDS | 50.0% | |
| GCTTCTGGTGCAGATCAAAG+TGG | + | chr1.4:1863172-1863191 | MS.gene90698:CDS | 50.0% | |
| GGTACAGAAGTTGTCCAACC+TGG | + | chr1.4:1860971-1860990 | MS.gene90698:intron | 50.0% | |
| GTATGCACCATTGCTGTGGT+TGG | + | chr1.4:1863013-1863032 | MS.gene90698:CDS | 50.0% | |
| GTCTCTGTTAGTGACTGTGG+TGG | + | chr1.4:1861102-1861121 | MS.gene90698:intron | 50.0% | |
| TATGAATCTCCGCTTCCCGT+TGG | + | chr1.4:1860143-1860162 | MS.gene90698:CDS | 50.0% | |
| TCTCCATTGGAGAACCACCT+TGG | - | chr1.4:1863213-1863232 | None:intergenic | 50.0% | |
| TCTCCGATCCAAAACTCACG+TGG | + | chr1.4:1859959-1859978 | MS.gene90698:CDS | 50.0% | |
| TGAACGACGAGTCTACCAAC+GGG | - | chr1.4:1860161-1860180 | None:intergenic | 50.0% | |
| TGACCAAGGTGGTTCTCCAA+TGG | + | chr1.4:1863207-1863226 | MS.gene90698:CDS | 50.0% | |
| TTTGATCAGATCTTCCCGGG+AGG | - | chr1.4:1862939-1862958 | None:intergenic | 50.0% | |
| ! | CCTGAGCTTTTCACCTTGCA+AGG | - | chr1.4:1862987-1863006 | None:intergenic | 50.0% |
| !! | AGATCAAAGTGGTGCTGGTG+GGG | + | chr1.4:1863183-1863202 | MS.gene90698:CDS | 50.0% |
| !! | CAGATCAAAGTGGTGCTGGT+GGG | + | chr1.4:1863182-1863201 | MS.gene90698:CDS | 50.0% |
| !! | CGATCATGGAAGCGTCCTTA+TGG | + | chr1.4:1862755-1862774 | MS.gene90698:CDS | 50.0% |
| !!! | GGTTTTGAGGAGGGAAACAG+TGG | + | chr1.4:1861957-1861976 | MS.gene90698:intron | 50.0% |
| !!! | TTTGGTCTTTTTTGCGGGGG+AGG | + | chr1.4:1860950-1860969 | MS.gene90698:intron | 50.0% |
| ACAACTTCACAGCCTCCTCC+CGG | + | chr1.4:1862921-1862940 | MS.gene90698:CDS | 55.0% | |
| ACGAGTCTACCAACGGGAAG+CGG | - | chr1.4:1860155-1860174 | None:intergenic | 55.0% | |
| ACGGGAAAGAACACGGCCAT+CGG | - | chr1.4:1860087-1860106 | None:intergenic | 55.0% | |
| AGTTGGACAGGGTGGGTATG+GGG | + | chr1.4:1862595-1862614 | MS.gene90698:intron | 55.0% | |
| CGTAACAACATGGTCACCGG+CGG | + | chr1.4:1859875-1859894 | MS.gene90698:CDS | 55.0% | |
| CTCCGTATGCACCATTGCTG+TGG | + | chr1.4:1863009-1863028 | MS.gene90698:CDS | 55.0% | |
| CTTCCAGGTGGAATACGCCA+TGG | + | chr1.4:1859905-1859924 | MS.gene90698:CDS | 55.0% | |
| CTTCCATGGCGTATTCCACC+TGG | - | chr1.4:1859911-1859930 | None:intergenic | 55.0% | |
| GAAGTAGGGAGACTGGTGTG+CGG | + | chr1.4:1861545-1861564 | MS.gene90698:intron | 55.0% | |
| GCAACTAGGGAGTCCTTGCA+AGG | + | chr1.4:1862971-1862990 | MS.gene90698:CDS | 55.0% | |
| GGTGCAGATCAAAGTGGTGC+TGG | + | chr1.4:1863178-1863197 | MS.gene90698:CDS | 55.0% | |
| GTAACAACATGGTCACCGGC+GGG | + | chr1.4:1859876-1859895 | MS.gene90698:CDS | 55.0% | |
| TCGCCGATAAGGCTCAGGTT+AGG | + | chr1.4:1860183-1860202 | MS.gene90698:intron | 55.0% | |
| TGCACCAGAAGCCTGATCTG+TGG | - | chr1.4:1863164-1863183 | None:intergenic | 55.0% | |
| ! | CGCGAGAACCACGTGAGTTT+TGG | - | chr1.4:1859970-1859989 | None:intergenic | 55.0% |
| ! | GCAGATCAAAGTGGTGCTGG+TGG | + | chr1.4:1863181-1863200 | MS.gene90698:CDS | 55.0% |
| ! | GGCGTTGGACTTCTAGTAGC+TGG | + | chr1.4:1862776-1862795 | MS.gene90698:CDS | 55.0% |
| !! | TGGAAGCGTCCTTATGGCGT+TGG | + | chr1.4:1862761-1862780 | MS.gene90698:CDS | 55.0% |
| ACCTGGAAGAGTCTTCCCGC+CGG | - | chr1.4:1859894-1859913 | None:intergenic | 60.0% | |
| AGCTGCACCTGCTGAACCTG+AGG | + | chr1.4:1863117-1863136 | MS.gene90698:CDS | 60.0% | |
| CAACTTCACAGCCTCCTCCC+GGG | + | chr1.4:1862922-1862941 | MS.gene90698:CDS | 60.0% | |
| CATATCGGCGTTGCCATCGC+CGG | + | chr1.4:1860053-1860072 | MS.gene90698:CDS | 60.0% | |
| CGTCGTTCAGCTCGCCGATA+AGG | + | chr1.4:1860172-1860191 | MS.gene90698:CDS | 60.0% | |
| GATCAGATCTTCCCGGGAGG+AGG | - | chr1.4:1862936-1862955 | None:intergenic | 60.0% | |
| GCAGGATGCTGCCACAGATC+AGG | + | chr1.4:1863150-1863169 | MS.gene90698:CDS | 60.0% | |
| GCTGCCACAGATCAGGCTTC+TGG | + | chr1.4:1863157-1863176 | MS.gene90698:CDS | 60.0% | |
| GGAAAGAACACGGCCATCGG+CGG | - | chr1.4:1860084-1860103 | None:intergenic | 60.0% | |
| GTTGGACAGGGTGGGTATGG+GGG | + | chr1.4:1862596-1862615 | MS.gene90698:intron | 60.0% | |
| TCAGCTCGCCGATAAGGCTC+AGG | + | chr1.4:1860178-1860197 | MS.gene90698:CDS | 60.0% | |
| TTGGACAGGGTGGGTATGGG+GGG | + | chr1.4:1862597-1862616 | MS.gene90698:intron | 60.0% | |
| ACCGGCGGGAAGACTCTTCC+AGG | + | chr1.4:1859890-1859909 | MS.gene90698:CDS | 65.0% | |
| ACCTGAGGCTGCAGCTGAGC+AGG | + | chr1.4:1863132-1863151 | MS.gene90698:CDS | 65.0% | |
| GCTGCAGCCTCAGGTTCAGC+AGG | - | chr1.4:1863127-1863146 | None:intergenic | 65.0% | |
| GGCGGGAAGACTCTTCCAGG+TGG | + | chr1.4:1859893-1859912 | MS.gene90698:CDS | 65.0% | |
| TCCTGCTCAGCTGCAGCCTC+AGG | - | chr1.4:1863136-1863155 | None:intergenic | 65.0% | |
| TGGACAGGGTGGGTATGGGG+GGG | + | chr1.4:1862598-1862617 | MS.gene90698:intron | 65.0% | |
| ACGGCCATCGGCGGTGAGAC+CGG | - | chr1.4:1860075-1860094 | None:intergenic | 70.0% | |
| ATCGCCGGTCTCACCGCCGA+TGG | + | chr1.4:1860068-1860087 | MS.gene90698:CDS | 70.0% | |
| ATCGGCGGTGAGACCGGCGA+TGG | - | chr1.4:1860069-1860088 | None:intergenic | 70.0% | |
| GCTGGTGGGGCTGACCAAGG+TGG | + | chr1.4:1863196-1863215 | MS.gene90698:CDS | 70.0% | |
| !! | GGTGCTGGTGGGGCTGACCA+AGG | + | chr1.4:1863193-1863212 | MS.gene90698:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 1859849 | 1863237 | 1859849 | ID=MS.gene90698 |
| chr1.4 | mRNA | 1859849 | 1863237 | 1859849 | ID=MS.gene90698.t1;Parent=MS.gene90698 |
| chr1.4 | exon | 1859849 | 1860199 | 1859849 | ID=MS.gene90698.t1.exon1;Parent=MS.gene90698.t1 |
| chr1.4 | CDS | 1859849 | 1860199 | 1859849 | ID=cds.MS.gene90698.t1;Parent=MS.gene90698.t1 |
| chr1.4 | exon | 1862743 | 1863237 | 1862743 | ID=MS.gene90698.t1.exon2;Parent=MS.gene90698.t1 |
| chr1.4 | CDS | 1862743 | 1863237 | 1862743 | ID=cds.MS.gene90698.t1;Parent=MS.gene90698.t1 |
| Gene Sequence |
| Protein sequence |
