Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27289.t1 | XP_013466130.1 | 100 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 3.20E-133 | 484.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27289.t1 | P34066 | 85.9 | 241 | 34 | 0 | 1 | 241 | 1 | 241 | 8.5e-119 | 427.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27289.t1 | I3RZQ6 | 100.0 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 2.3e-133 | 484.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27289.t1 | MTR_1g022410 | 97.887 | 284 | 3 | 1 | 1 | 281 | 1 | 284 | 0.0 | 573 |
| MS.gene27289.t1 | MTR_4g012740 | 78.571 | 322 | 25 | 3 | 1 | 281 | 232 | 550 | 2.45e-163 | 465 |
| MS.gene27289.t1 | MTR_4g012740 | 64.773 | 88 | 16 | 2 | 1 | 73 | 1 | 88 | 1.48e-24 | 103 |
| MS.gene27289.t1 | MTR_4g012740 | 63.636 | 88 | 17 | 2 | 1 | 73 | 78 | 165 | 2.13e-24 | 102 |
| MS.gene27289.t1 | MTR_4g012740 | 63.636 | 88 | 17 | 2 | 1 | 73 | 155 | 242 | 2.13e-24 | 102 |
| MS.gene27289.t1 | MTR_4g057090 | 70.175 | 285 | 55 | 4 | 1 | 281 | 83 | 341 | 6.53e-124 | 357 |
| MS.gene27289.t1 | MTR_3g113730 | 87.805 | 164 | 18 | 1 | 118 | 281 | 4 | 165 | 3.77e-103 | 298 |
| MS.gene27289.t1 | MTR_1g112250 | 45.902 | 183 | 94 | 2 | 1 | 178 | 3 | 185 | 7.61e-47 | 157 |
| MS.gene27289.t1 | MTR_7g070070 | 38.785 | 214 | 125 | 3 | 5 | 214 | 4 | 215 | 3.96e-43 | 147 |
| MS.gene27289.t1 | MTR_5g016590 | 38.785 | 214 | 125 | 3 | 5 | 214 | 4 | 215 | 6.34e-43 | 147 |
| MS.gene27289.t1 | MTR_0167s0060 | 35.111 | 225 | 141 | 3 | 1 | 223 | 1 | 222 | 2.17e-41 | 143 |
| MS.gene27289.t1 | MTR_6g024135 | 40.838 | 191 | 108 | 3 | 6 | 193 | 8 | 196 | 1.02e-38 | 136 |
| MS.gene27289.t1 | MTR_2g060830 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 1.62e-38 | 135 |
| MS.gene27289.t1 | MTR_8g464460 | 35.217 | 230 | 143 | 5 | 6 | 230 | 9 | 237 | 2.25e-38 | 135 |
| MS.gene27289.t1 | MTR_8g075320 | 37.736 | 212 | 123 | 4 | 5 | 210 | 3 | 211 | 8.29e-38 | 134 |
| MS.gene27289.t1 | MTR_2g016050 | 35.681 | 213 | 128 | 4 | 4 | 210 | 2 | 211 | 4.33e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27289.t1 | AT1G47250 | 78.445 | 283 | 53 | 2 | 1 | 281 | 1 | 277 | 6.24e-160 | 446 |
| MS.gene27289.t1 | AT5G42790 | 86.134 | 238 | 33 | 0 | 1 | 238 | 1 | 238 | 6.61e-159 | 443 |
| MS.gene27289.t1 | AT1G53850 | 38.819 | 237 | 135 | 4 | 1 | 232 | 3 | 234 | 2.41e-46 | 155 |
| MS.gene27289.t1 | AT1G53850 | 38.819 | 237 | 135 | 4 | 1 | 232 | 3 | 234 | 2.41e-46 | 155 |
| MS.gene27289.t1 | AT3G14290 | 45.355 | 183 | 95 | 2 | 1 | 178 | 3 | 185 | 2.44e-46 | 155 |
| MS.gene27289.t1 | AT3G22110 | 36.017 | 236 | 141 | 4 | 5 | 232 | 4 | 237 | 2.43e-43 | 148 |
| MS.gene27289.t1 | AT1G16470 | 36.444 | 225 | 138 | 3 | 1 | 223 | 1 | 222 | 2.39e-40 | 140 |
| MS.gene27289.t1 | AT1G16470 | 36.444 | 225 | 138 | 3 | 1 | 223 | 1 | 222 | 2.39e-40 | 140 |
| MS.gene27289.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene27289.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene27289.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene27289.t1 | AT5G35590 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 1.95e-38 | 135 |
| MS.gene27289.t1 | AT5G66140 | 38.208 | 212 | 122 | 4 | 5 | 210 | 3 | 211 | 4.08e-37 | 132 |
| MS.gene27289.t1 | AT2G05840 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 4.32e-37 | 132 |
| MS.gene27289.t1 | AT3G51260 | 37.264 | 212 | 124 | 4 | 5 | 210 | 3 | 211 | 5.50e-36 | 129 |
| MS.gene27289.t1 | AT3G51260 | 37.264 | 212 | 124 | 4 | 5 | 210 | 3 | 211 | 6.42e-36 | 129 |
| MS.gene27289.t1 | AT2G05840 | 36.181 | 199 | 123 | 3 | 6 | 200 | 9 | 207 | 1.40e-35 | 127 |
| MS.gene27289.t1 | AT2G27020 | 37.895 | 190 | 115 | 2 | 6 | 193 | 8 | 196 | 8.12e-35 | 126 |
| MS.gene27289.t1 | AT2G05840 | 36.170 | 188 | 116 | 3 | 6 | 189 | 9 | 196 | 1.18e-33 | 122 |
| MS.gene27289.t1 | AT2G27020 | 37.895 | 190 | 115 | 2 | 6 | 193 | 110 | 298 | 1.77e-33 | 125 |
| MS.gene27289.t1 | AT4G15165 | 33.654 | 208 | 87 | 7 | 5 | 204 | 4 | 168 | 2.35e-25 | 100 |
Find 83 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGAGCCTTTCCACATTT+TGG | 0.215333 | 1.1:+1834820 | MS.gene27289:CDS |
| CGCGAGAACCACGTGAGTTT+TGG | 0.220139 | 1.1:-1831746 | None:intergenic |
| ACAAGCTGCAAAGACATATT+TGG | 0.303194 | 1.1:+1834667 | MS.gene27289:CDS |
| TCCTGCTCAGCTGCAGCCTC+AGG | 0.321152 | 1.1:-1834914 | None:intergenic |
| TAACCTAACCTGAGCCTTAT+CGG | 0.340591 | 1.1:-1831965 | None:intergenic |
| GCTGCCACAGATCAGGCTTC+TGG | 0.352014 | 1.1:+1834938 | MS.gene27289:CDS |
| CGATCATGGAAGCGTCCTTA+TGG | 0.372743 | 1.1:+1834536 | MS.gene27289:CDS |
| GTAGCTGGATTAGATGAATC+AGG | 0.390011 | 1.1:+1834572 | MS.gene27289:CDS |
| ATGAGAAGAGAGTTCAGAAT+TGG | 0.397456 | 1.1:-1831782 | None:intergenic |
| GGCGTTGGACTTCTAGTAGC+TGG | 0.403744 | 1.1:+1834557 | MS.gene27289:CDS |
| CGCTTGGGCAGTTGTAATAG+AGG | 0.407257 | 1.1:-1834601 | None:intergenic |
| GCTGCAGCCTCAGGTTCAGC+AGG | 0.411570 | 1.1:-1834905 | None:intergenic |
| ACCTGAGGCTGCAGCTGAGC+AGG | 0.426509 | 1.1:+1834913 | MS.gene27289:CDS |
| TCATCAGAAGAAGATCTTCA+AGG | 0.432131 | 1.1:+1831801 | MS.gene27289:CDS |
| GCAGGATGCTGCCACAGATC+AGG | 0.446173 | 1.1:+1834931 | MS.gene27289:CDS |
| TTAAATTATCAAATCTCCAT+TGG | 0.446472 | 1.1:-1835004 | None:intergenic |
| AAGCAAGGTTCAGCAGCAAT+AGG | 0.446969 | 1.1:+1831715 | MS.gene27289:CDS |
| ACCGGCGGGAAGACTCTTCC+AGG | 0.447398 | 1.1:+1831669 | MS.gene27289:CDS |
| CATCTTTGATCAGATCTTCC+CGG | 0.448900 | 1.1:-1834721 | None:intergenic |
| CAGATCAAAGTGGTGCTGGT+GGG | 0.452356 | 1.1:+1834963 | MS.gene27289:CDS |
| CCTTGCAAGGTGAAAAGCTC+AGG | 0.463589 | 1.1:+1834765 | MS.gene27289:CDS |
| GCATTCAGATCTCATGTAAC+GGG | 0.468182 | 1.1:-1831881 | None:intergenic |
| GATCAGATCTTCCCGGGAGG+AGG | 0.468370 | 1.1:-1834714 | None:intergenic |
| ACGGCCATCGGCGGTGAGAC+CGG | 0.470971 | 1.1:-1831851 | None:intergenic |
| GGTGCTGGTGGGGCTGACCA+AGG | 0.471608 | 1.1:+1834974 | MS.gene27289:CDS |
| GCAGATCAAAGTGGTGCTGG+TGG | 0.482449 | 1.1:+1834962 | MS.gene27289:CDS |
| CGTCGTTCAGCTCGCCGATA+AGG | 0.485800 | 1.1:+1831951 | MS.gene27289:CDS |
| ATTCAAAATAGTTTCCGCTT+GGG | 0.489662 | 1.1:-1834616 | None:intergenic |
| ACTAGAAGTCCAACGCCATA+AGG | 0.491926 | 1.1:-1834551 | None:intergenic |
| AGGTTTGCACTCAGCGATCA+TGG | 0.494067 | 1.1:+1834522 | MS.gene27289:intron |
| ACAACTTCACAGCCTCCTCC+CGG | 0.497935 | 1.1:+1834702 | MS.gene27289:CDS |
| GAATATCAGGCATTTGCAAT+CGG | 0.498552 | 1.1:+1834635 | MS.gene27289:CDS |
| CTTCCATGGCGTATTCCACC+TGG | 0.500589 | 1.1:-1831687 | None:intergenic |
| TATTCAAAATAGTTTCCGCT+TGG | 0.508568 | 1.1:-1834617 | None:intergenic |
| ACCATTGCTGTGGTTGGAGT+TGG | 0.514251 | 1.1:+1834800 | MS.gene27289:CDS |
| TTCAAGGTTGATGATCATAT+CGG | 0.515192 | 1.1:+1831817 | MS.gene27289:CDS |
| ATCTTTGATCAGATCTTCCC+GGG | 0.521887 | 1.1:-1834720 | None:intergenic |
| AAGATGCACTCATTGCAACT+AGG | 0.529448 | 1.1:+1834738 | MS.gene27289:CDS |
| AGATCAAAGTGGTGCTGGTG+GGG | 0.531118 | 1.1:+1834964 | MS.gene27289:CDS |
| GGTGCAGATCAAAGTGGTGC+TGG | 0.531835 | 1.1:+1834959 | MS.gene27289:CDS |
| TGGAAGCGTCCTTATGGCGT+TGG | 0.534162 | 1.1:+1834542 | MS.gene27289:CDS |
| AACCACAGCAATGGTGCATA+CGG | 0.536605 | 1.1:-1834792 | None:intergenic |
| CTCTATTACAACTGCCCAAG+CGG | 0.540260 | 1.1:+1834602 | MS.gene27289:CDS |
| ACGAGTCTACCAACGGGAAG+CGG | 0.541672 | 1.1:-1831931 | None:intergenic |
| AGATGCACTCATTGCAACTA+GGG | 0.552459 | 1.1:+1834739 | MS.gene27289:CDS |
| TCAGCTCGCCGATAAGGCTC+AGG | 0.552948 | 1.1:+1831957 | MS.gene27289:CDS |
| CATATCGGCGTTGCCATCGC+CGG | 0.553468 | 1.1:+1831832 | MS.gene27289:CDS |
| GTATGCACCATTGCTGTGGT+TGG | 0.557714 | 1.1:+1834794 | MS.gene27289:CDS |
| ATCGCCGGTCTCACCGCCGA+TGG | 0.557766 | 1.1:+1831847 | MS.gene27289:CDS |
| ACCTTGCTTAACTGCTTCCA+TGG | 0.560856 | 1.1:-1831701 | None:intergenic |
| TGCATTCAGATCTCATGTAA+CGG | 0.564752 | 1.1:-1831882 | None:intergenic |
| CGACGTAACAACATGGTCAC+CGG | 0.568536 | 1.1:+1831651 | MS.gene27289:CDS |
| TGAACGACGAGTCTACCAAC+GGG | 0.572203 | 1.1:-1831937 | None:intergenic |
| TAGCTGGATTAGATGAATCA+GGG | 0.572392 | 1.1:+1834573 | MS.gene27289:CDS |
| ACGGGAAAGAACACGGCCAT+CGG | 0.576909 | 1.1:-1831863 | None:intergenic |
| CAGTTTCCTGATCCAAAATG+TGG | 0.582560 | 1.1:-1834832 | None:intergenic |
| TATGAATCTCCGCTTCCCGT+TGG | 0.585267 | 1.1:+1831922 | MS.gene27289:CDS |
| AGCTGCACCTGCTGAACCTG+AGG | 0.586152 | 1.1:+1834898 | MS.gene27289:CDS |
| CAACTTCACAGCCTCCTCCC+GGG | 0.586785 | 1.1:+1834703 | MS.gene27289:CDS |
| TGACCAAGGTGGTTCTCCAA+TGG | 0.586988 | 1.1:+1834988 | MS.gene27289:CDS |
| ATCGGCGGTGAGACCGGCGA+TGG | 0.592757 | 1.1:-1831845 | None:intergenic |
| TCCTGATCCAAAATGTGGAA+AGG | 0.593184 | 1.1:-1834827 | None:intergenic |
| ACCAACTCCAACCACAGCAA+TGG | 0.594452 | 1.1:-1834801 | None:intergenic |
| GCTGGTGGGGCTGACCAAGG+TGG | 0.603851 | 1.1:+1834977 | MS.gene27289:CDS |
| CTTCCAGGTGGAATACGCCA+TGG | 0.612270 | 1.1:+1831684 | MS.gene27289:CDS |
| CTCCGTATGCACCATTGCTG+TGG | 0.615712 | 1.1:+1834790 | MS.gene27289:CDS |
| GCAACTAGGGAGTCCTTGCA+AGG | 0.618439 | 1.1:+1834752 | MS.gene27289:CDS |
| TCTCCATTGGAGAACCACCT+TGG | 0.619130 | 1.1:-1834991 | None:intergenic |
| ACCTGGAAGAGTCTTCCCGC+CGG | 0.625765 | 1.1:-1831670 | None:intergenic |
| GTAACAACATGGTCACCGGC+GGG | 0.626802 | 1.1:+1831655 | MS.gene27289:CDS |
| CGTAACAACATGGTCACCGG+CGG | 0.638962 | 1.1:+1831654 | MS.gene27289:CDS |
| GGAAAGAACACGGCCATCGG+CGG | 0.645115 | 1.1:-1831860 | None:intergenic |
| TGCACCAGAAGCCTGATCTG+TGG | 0.645294 | 1.1:-1834942 | None:intergenic |
| TCATGTAACGGGAAAGAACA+CGG | 0.645339 | 1.1:-1831870 | None:intergenic |
| CTGAACGACGAGTCTACCAA+CGG | 0.653690 | 1.1:-1831938 | None:intergenic |
| ACGATACCGACGTAACAACA+TGG | 0.654506 | 1.1:+1831644 | MS.gene27289:CDS |
| GCCATGGAAGCAGTTAAGCA+AGG | 0.656151 | 1.1:+1831700 | MS.gene27289:CDS |
| AGCTGGATTAGATGAATCAG+GGG | 0.660204 | 1.1:+1834574 | MS.gene27289:CDS |
| CGGTGACCATGTTGTTACGT+CGG | 0.692398 | 1.1:-1831650 | None:intergenic |
| GCTTCTGGTGCAGATCAAAG+TGG | 0.697173 | 1.1:+1834953 | MS.gene27289:CDS |
| GGCGGGAAGACTCTTCCAGG+TGG | 0.706418 | 1.1:+1831672 | MS.gene27289:CDS |
| TCTCCGATCCAAAACTCACG+TGG | 0.728289 | 1.1:+1831738 | MS.gene27289:CDS |
| TTTGATCAGATCTTCCCGGG+AGG | 0.729135 | 1.1:-1834717 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTAAATTAAGTAATTTTAA+TGG | + | chr1.1:1832091-1832110 | MS.gene27289:intron | 10.0% |
| !! | AAATAATAACAAAATCAAAC+AGG | - | chr1.1:1832824-1832843 | None:intergenic | 15.0% |
| !! | ATTCAATAAACTAAAACATT+TGG | + | chr1.1:1834287-1834306 | MS.gene27289:intron | 15.0% |
| !! | TTCTCTAATGTTTATTATAT+AGG | + | chr1.1:1832653-1832672 | MS.gene27289:intron | 15.0% |
| !!! | ACTATTTTGTATACTTAATA+TGG | + | chr1.1:1833304-1833323 | MS.gene27289:intron | 15.0% |
| !! | AAACATTAGAGAATACATTT+CGG | - | chr1.1:1832646-1832665 | None:intergenic | 20.0% |
| !! | AAATACAGTGTTAACAAAAA+GGG | - | chr1.1:1832238-1832257 | None:intergenic | 20.0% |
| !! | ATATAGAAACAGCATAAATA+GGG | - | chr1.1:1834232-1834251 | None:intergenic | 20.0% |
| !! | ATATTACATGGAAAAGAATA+AGG | + | chr1.1:1834428-1834447 | MS.gene27289:intron | 20.0% |
| !! | CAAAATTACATCATAAATAC+TGG | - | chr1.1:1834496-1834515 | None:intergenic | 20.0% |
| !! | TATATAGAAACAGCATAAAT+AGG | - | chr1.1:1834233-1834252 | None:intergenic | 20.0% |
| !! | TTTAACTCAGTAATTCAATT+AGG | + | chr1.1:1832069-1832088 | MS.gene27289:intron | 20.0% |
| !!! | ATTTATGATGTAATTTTGAG+TGG | + | chr1.1:1834498-1834517 | MS.gene27289:intron | 20.0% |
| !!! | GTGTTTTATTAATAGAAAGT+TGG | + | chr1.1:1834360-1834379 | MS.gene27289:intron | 20.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr1.1:1832461-1832480 | MS.gene27289:intron | 25.0% |
| ! | AAAATACTATGATGCTTCTA+TGG | + | chr1.1:1832780-1832799 | MS.gene27289:intron | 25.0% |
| ! | ACACACATTTATATACTTCT+GGG | - | chr1.1:1833230-1833249 | None:intergenic | 25.0% |
| ! | AGGTACAAAAATTATTTCAC+AGG | - | chr1.1:1833132-1833151 | None:intergenic | 25.0% |
| ! | ATTTATATACTTCTGGGTAT+AGG | - | chr1.1:1833224-1833243 | None:intergenic | 25.0% |
| ! | CAAATACAGTGTTAACAAAA+AGG | - | chr1.1:1832239-1832258 | None:intergenic | 25.0% |
| ! | GTATACTTAATATGGAAGTA+GGG | + | chr1.1:1833312-1833331 | MS.gene27289:intron | 25.0% |
| ! | TAGTCGAGATTATTTACTTT+AGG | + | chr1.1:1832177-1832196 | MS.gene27289:intron | 25.0% |
| ! | TATAGAAACAGCATAAATAG+GGG | - | chr1.1:1834231-1834250 | None:intergenic | 25.0% |
| ! | TATTAATAGAAAGTTGGACA+GGG | + | chr1.1:1834366-1834385 | MS.gene27289:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr1.1:1832349-1832368 | MS.gene27289:intron | 25.0% |
| ! | TGTATACTTAATATGGAAGT+AGG | + | chr1.1:1833311-1833330 | MS.gene27289:intron | 25.0% |
| ! | TGTTCGGATTATTCTAATTA+GGG | + | chr1.1:1832016-1832035 | MS.gene27289:intron | 25.0% |
| ! | TTATTAATAGAAAGTTGGAC+AGG | + | chr1.1:1834365-1834384 | MS.gene27289:intron | 25.0% |
| ! | TTGAATGAATTAAATAGACC+AGG | - | chr1.1:1834273-1834292 | None:intergenic | 25.0% |
| ! | TTGTTCGGATTATTCTAATT+AGG | + | chr1.1:1832015-1832034 | MS.gene27289:intron | 25.0% |
| !! | AAACGTTTGAAACTATGTTT+AGG | + | chr1.1:1832605-1832624 | MS.gene27289:intron | 25.0% |
| !! | ATCATACTCTTTTTGATGTT+TGG | + | chr1.1:1833052-1833071 | MS.gene27289:intron | 25.0% |
| !! | ATTTGGTTAGTTAATCAACA+TGG | + | chr1.1:1834304-1834323 | MS.gene27289:intron | 25.0% |
| !! | GATTTGACTTAACTCTTATT+GGG | + | chr1.1:1834135-1834154 | MS.gene27289:intron | 25.0% |
| !! | TGATTTGACTTAACTCTTAT+TGG | + | chr1.1:1834134-1834153 | MS.gene27289:intron | 25.0% |
| !! | TTTCAGTTTTCAACTTTTGT+TGG | + | chr1.1:1832498-1832517 | MS.gene27289:intron | 25.0% |
| !!! | CATCAAAAAGAGTATGATTT+TGG | - | chr1.1:1833050-1833069 | None:intergenic | 25.0% |
| !!! | TAAAGTGTTAACAACACTTT+TGG | + | chr1.1:1834191-1834210 | MS.gene27289:intron | 25.0% |
| !!! | TGACAGTCATTTTGTATTTA+AGG | - | chr1.1:1833666-1833685 | None:intergenic | 25.0% |
| !!! | TGTAAATGTTGTTTTGATAG+TGG | + | chr1.1:1833405-1833424 | MS.gene27289:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr1.1:1832462-1832481 | MS.gene27289:intron | 30.0% | |
| ACGGTGTAGTTATTCAAATT+GGG | + | chr1.1:1833491-1833510 | MS.gene27289:intron | 30.0% | |
| ATAGTTACTATATGTGAACC+TGG | + | chr1.1:1834252-1834271 | MS.gene27289:intron | 30.0% | |
| ATCTTGTCTTGCATATTACA+TGG | + | chr1.1:1834416-1834435 | MS.gene27289:intron | 30.0% | |
| ATTCAAAATAGTTTCCGCTT+GGG | - | chr1.1:1834619-1834638 | None:intergenic | 30.0% | |
| CAAAAATAAGCCAATCCAAA+TGG | - | chr1.1:1832301-1832320 | None:intergenic | 30.0% | |
| CACACACATTTATATACTTC+TGG | - | chr1.1:1833231-1833250 | None:intergenic | 30.0% | |
| CATATGATAGAGATTAGAGA+CGG | + | chr1.1:1833459-1833478 | MS.gene27289:intron | 30.0% | |
| GACAGTGATTAGAATGAAAT+GGG | + | chr1.1:1832258-1832277 | MS.gene27289:intron | 30.0% | |
| TAATTGTGATTGAGAGAAGA+TGG | + | chr1.1:1832554-1832573 | MS.gene27289:intron | 30.0% | |
| TACGGTGTAGTTATTCAAAT+TGG | + | chr1.1:1833490-1833509 | MS.gene27289:intron | 30.0% | |
| TATCTTACTTTCATTCTCTG+TGG | + | chr1.1:1833623-1833642 | MS.gene27289:intron | 30.0% | |
| TATTCAAAATAGTTTCCGCT+TGG | - | chr1.1:1834620-1834639 | None:intergenic | 30.0% | |
| TGACAGTGATTAGAATGAAA+TGG | + | chr1.1:1832257-1832276 | MS.gene27289:intron | 30.0% | |
| TGATTTACTTAGCATTGTAG+TGG | + | chr1.1:1833764-1833783 | MS.gene27289:intron | 30.0% | |
| TTGAATGTCTTGAGAATTTG+AGG | + | chr1.1:1832842-1832861 | MS.gene27289:intron | 30.0% | |
| ! | CAGAAGTATATAAATGTGTG+TGG | + | chr1.1:1833229-1833248 | MS.gene27289:intron | 30.0% |
| ! | CTTTTTGATGTTTGGTTGTT+TGG | + | chr1.1:1833060-1833079 | MS.gene27289:intron | 30.0% |
| !! | ATCACTTTTGAGCTGTTATT+TGG | + | chr1.1:1833276-1833295 | MS.gene27289:intron | 30.0% |
| !! | ATCTAGAGGGAGTATATTTT+CGG | + | chr1.1:1832582-1832601 | MS.gene27289:intron | 30.0% |
| !! | CGGAAACTATTTTGAATATC+AGG | + | chr1.1:1834622-1834641 | MS.gene27289:CDS | 30.0% |
| !! | GATTTGATTTGTTATGCTTG+TGG | + | chr1.1:1832135-1832154 | MS.gene27289:intron | 30.0% |
| !! | GTATGATTTTGGCAAAATCA+CGG | - | chr1.1:1833039-1833058 | None:intergenic | 30.0% |
| !! | TAACTTGCTTGTAGAATAAC+TGG | + | chr1.1:1834056-1834075 | MS.gene27289:intron | 30.0% |
| !! | TGTTTTGTTACGATCCATTA+TGG | + | chr1.1:1833555-1833574 | MS.gene27289:intron | 30.0% |
| !! | TTCAAGGTTGATGATCATAT+CGG | + | chr1.1:1831817-1831836 | MS.gene27289:CDS | 30.0% |
| !!! | AATTGTAGCTAGGGTTTTTT+AGG | + | chr1.1:1832045-1832064 | MS.gene27289:intron | 30.0% |
| !!! | ATTGTAGCTAGGGTTTTTTA+GGG | + | chr1.1:1832046-1832065 | MS.gene27289:intron | 30.0% |
| !!! | GAGAATTTGAGGTTTTTAGT+TGG | + | chr1.1:1832853-1832872 | MS.gene27289:intron | 30.0% |
| !!! | TGATACTTTTGAGATTGTGA+GGG | + | chr1.1:1834868-1834887 | MS.gene27289:CDS | 30.0% |
| !!! | TTGATACTTTTGAGATTGTG+AGG | + | chr1.1:1834867-1834886 | MS.gene27289:CDS | 30.0% |
| ACAAGCTGCAAAGACATATT+TGG | + | chr1.1:1834667-1834686 | MS.gene27289:CDS | 35.0% | |
| ACAGAGGTAAAAACGGAAAA+CGG | - | chr1.1:1831995-1832014 | None:intergenic | 35.0% | |
| AGAATAATCCGAACAAACAG+AGG | - | chr1.1:1832011-1832030 | None:intergenic | 35.0% | |
| ATATACTTCTGGGTATAGGT+TGG | - | chr1.1:1833220-1833239 | None:intergenic | 35.0% | |
| ATCCATTATGGATGTTCTAG+GGG | + | chr1.1:1833567-1833586 | MS.gene27289:intron | 35.0% | |
| ATGAGAAGAGAGTTCAGAAT+TGG | - | chr1.1:1831785-1831804 | None:intergenic | 35.0% | |
| ATGCATAGAGAAATCCTGAA+GGG | + | chr1.1:1833902-1833921 | MS.gene27289:intron | 35.0% | |
| ATGTCATTCTTTGATGCATC+TGG | + | chr1.1:1833697-1833716 | MS.gene27289:intron | 35.0% | |
| CAGTGTTAACAAAAAGGGTT+TGG | - | chr1.1:1832233-1832252 | None:intergenic | 35.0% | |
| CGAACAAACAGAGGTAAAAA+CGG | - | chr1.1:1832002-1832021 | None:intergenic | 35.0% | |
| CGGTAAGTTTGACAAAATCA+CGG | + | chr1.1:1832967-1832986 | MS.gene27289:intron | 35.0% | |
| GAAAACTGAAACAGACACTA+AGG | - | chr1.1:1832489-1832508 | None:intergenic | 35.0% | |
| GAATATCAGGCATTTGCAAT+CGG | + | chr1.1:1834635-1834654 | MS.gene27289:CDS | 35.0% | |
| GATCCATTATGGATGTTCTA+GGG | + | chr1.1:1833566-1833585 | MS.gene27289:intron | 35.0% | |
| GGTAAGTTTGACAAAATCAC+GGG | + | chr1.1:1832968-1832987 | MS.gene27289:intron | 35.0% | |
| TATGATGCTTCTATGGTGTT+TGG | + | chr1.1:1832787-1832806 | MS.gene27289:intron | 35.0% | |
| TCATCAGAAGAAGATCTTCA+AGG | + | chr1.1:1831801-1831820 | MS.gene27289:CDS | 35.0% | |
| TGCATTCAGATCTCATGTAA+CGG | - | chr1.1:1831885-1831904 | None:intergenic | 35.0% | |
| TGTAAGATTCAGTGTCCATT+TGG | + | chr1.1:1832283-1832302 | MS.gene27289:intron | 35.0% | |
| TTCACTTTCCCATTACTATG+AGG | - | chr1.1:1833597-1833616 | None:intergenic | 35.0% | |
| ! | AGTTTTCAACTTTTGTTGGC+TGG | + | chr1.1:1832502-1832521 | MS.gene27289:intron | 35.0% |
| ! | CGTTTTTACCTCTGTTTGTT+CGG | + | chr1.1:1832000-1832019 | MS.gene27289:intron | 35.0% |
| ! | CTAATGACACGTTCTACTTT+TGG | - | chr1.1:1832699-1832718 | None:intergenic | 35.0% |
| ! | TAGCTGGATTAGATGAATCA+GGG | + | chr1.1:1834573-1834592 | MS.gene27289:CDS | 35.0% |
| ! | TCTTCTCTTTCAAGGTTTTG+AGG | + | chr1.1:1833724-1833743 | MS.gene27289:intron | 35.0% |
| !! | ACTTTAGGATCTTAACTGAG+TGG | + | chr1.1:1832192-1832211 | MS.gene27289:intron | 35.0% |
| !! | ATGATGTAATTTTGAGTGGC+AGG | + | chr1.1:1834502-1834521 | MS.gene27289:intron | 35.0% |
| !! | TCATTAGTTTCCTCTCCTTT+TGG | + | chr1.1:1832712-1832731 | MS.gene27289:intron | 35.0% |
| !! | TCTCCTTTTGGTCTTTTTTG+CGG | + | chr1.1:1832724-1832743 | MS.gene27289:intron | 35.0% |
| !!! | AGGGTTTTGAAATTGTAGCT+AGG | + | chr1.1:1832035-1832054 | MS.gene27289:intron | 35.0% |
| !!! | GGGTTTTGAAATTGTAGCTA+GGG | + | chr1.1:1832036-1832055 | MS.gene27289:intron | 35.0% |
| AAACAGCATAAATAGGGGAG+GGG | - | chr1.1:1834226-1834245 | None:intergenic | 40.0% | |
| AAGATGCACTCATTGCAACT+AGG | + | chr1.1:1834738-1834757 | MS.gene27289:CDS | 40.0% | |
| AATAGAAAGTTGGACAGGGT+GGG | + | chr1.1:1834370-1834389 | MS.gene27289:intron | 40.0% | |
| ACAGTTCCGTTGACATCATT+AGG | - | chr1.1:1833531-1833550 | None:intergenic | 40.0% | |
| AGAAACAGCATAAATAGGGG+AGG | - | chr1.1:1834228-1834247 | None:intergenic | 40.0% | |
| AGAAGATGGAAGCAATCTAG+AGG | + | chr1.1:1832568-1832587 | MS.gene27289:intron | 40.0% | |
| AGATGCACTCATTGCAACTA+GGG | + | chr1.1:1834739-1834758 | MS.gene27289:CDS | 40.0% | |
| ATCTTTGATCAGATCTTCCC+GGG | - | chr1.1:1834723-1834742 | None:intergenic | 40.0% | |
| ATGCACCCTAATGATGTCAA+CGG | + | chr1.1:1833522-1833541 | MS.gene27289:intron | 40.0% | |
| ATTGTCTAAACTGTCGTGAG+AGG | + | chr1.1:1833826-1833845 | MS.gene27289:intron | 40.0% | |
| CAGTTCCGTTGACATCATTA+GGG | - | chr1.1:1833530-1833549 | None:intergenic | 40.0% | |
| CAGTTTCCTGATCCAAAATG+TGG | - | chr1.1:1834835-1834854 | None:intergenic | 40.0% | |
| CATCTTTGATCAGATCTTCC+CGG | - | chr1.1:1834724-1834743 | None:intergenic | 40.0% | |
| CATGCATAGAGAAATCCTGA+AGG | + | chr1.1:1833901-1833920 | MS.gene27289:intron | 40.0% | |
| CGATCCATTATGGATGTTCT+AGG | + | chr1.1:1833565-1833584 | MS.gene27289:intron | 40.0% | |
| CGGTTGGCAAAAACTAAGTT+TGG | - | chr1.1:1833019-1833038 | None:intergenic | 40.0% | |
| CTTACTTTCATTCTCTGTGG+AGG | + | chr1.1:1833626-1833645 | MS.gene27289:intron | 40.0% | |
| GAAACAGCATAAATAGGGGA+GGG | - | chr1.1:1834227-1834246 | None:intergenic | 40.0% | |
| GAAGATGGAAGCAATCTAGA+GGG | + | chr1.1:1832569-1832588 | MS.gene27289:intron | 40.0% | |
| GATTCAGTGTCCATTTGGAT+TGG | + | chr1.1:1832288-1832307 | MS.gene27289:intron | 40.0% | |
| GCAAAAAAGACCAAAAGGAG+AGG | - | chr1.1:1832725-1832744 | None:intergenic | 40.0% | |
| GCATTCAGATCTCATGTAAC+GGG | - | chr1.1:1831884-1831903 | None:intergenic | 40.0% | |
| TAATAGAAAGTTGGACAGGG+TGG | + | chr1.1:1834369-1834388 | MS.gene27289:intron | 40.0% | |
| TAATATGGAAGTAGGGAGAC+TGG | + | chr1.1:1833319-1833338 | MS.gene27289:intron | 40.0% | |
| TACCCCTAGAACATCCATAA+TGG | - | chr1.1:1833572-1833591 | None:intergenic | 40.0% | |
| TACGCTGTTGTGTTGTCTTA+TGG | + | chr1.1:1833995-1834014 | MS.gene27289:intron | 40.0% | |
| TCCTGATCCAAAATGTGGAA+AGG | - | chr1.1:1834830-1834849 | None:intergenic | 40.0% | |
| TGCATAGAGAAATCCTGAAG+GGG | + | chr1.1:1833903-1833922 | MS.gene27289:intron | 40.0% | |
| TGTAGAATAACTGGCTGAAC+AGG | + | chr1.1:1834065-1834084 | MS.gene27289:intron | 40.0% | |
| TGTCTTCTTGACAAACACGA+CGG | - | chr1.1:1833155-1833174 | None:intergenic | 40.0% | |
| TGTTGTCTTATGGTGTGAAG+TGG | + | chr1.1:1834005-1834024 | MS.gene27289:intron | 40.0% | |
| TTAGAGACGGAGTTAGACTA+CGG | + | chr1.1:1833472-1833491 | MS.gene27289:intron | 40.0% | |
| ! | AGCTGGATTAGATGAATCAG+GGG | + | chr1.1:1834574-1834593 | MS.gene27289:CDS | 40.0% |
| ! | GTAGCTGGATTAGATGAATC+AGG | + | chr1.1:1834572-1834591 | MS.gene27289:CDS | 40.0% |
| ! | TAACCTAACCTGAGCCTTAT+CGG | - | chr1.1:1831968-1831987 | None:intergenic | 40.0% |
| ! | TCATAGTATTTTGCCTACCC+AGG | - | chr1.1:1832772-1832791 | None:intergenic | 40.0% |
| ! | TCATGTAACGGGAAAGAACA+CGG | - | chr1.1:1831873-1831892 | None:intergenic | 40.0% |
| ! | TTGTTGCTTGTGTGAAATGG+CGG | + | chr1.1:1832947-1832966 | MS.gene27289:intron | 40.0% |
| !! | CTCCTTTTGGTCTTTTTTGC+GGG | + | chr1.1:1832725-1832744 | MS.gene27289:intron | 40.0% |
| !! | GACTTGTTGCTTGTGTGAAA+TGG | + | chr1.1:1832944-1832963 | MS.gene27289:intron | 40.0% |
| !! | GATTTTGGCAAAATCACGGT+TGG | - | chr1.1:1833035-1833054 | None:intergenic | 40.0% |
| !! | TCCTTTTGGTCTTTTTTGCG+GGG | + | chr1.1:1832726-1832745 | MS.gene27289:intron | 40.0% |
| !!! | CTCTTTCAAGGTTTTGAGGA+GGG | + | chr1.1:1833728-1833747 | MS.gene27289:intron | 40.0% |
| !!! | GTTTGCTGACTCTTGTTTTC+TGG | + | chr1.1:1832917-1832936 | MS.gene27289:intron | 40.0% |
| !!! | TACTTTTGAGATTGTGAGGG+AGG | + | chr1.1:1834871-1834890 | MS.gene27289:CDS | 40.0% |
| !!! | TCTCTTTCAAGGTTTTGAGG+AGG | + | chr1.1:1833727-1833746 | MS.gene27289:intron | 40.0% |
| AAACTGTCGTGAGAGGCTAT+TGG | + | chr1.1:1833833-1833852 | MS.gene27289:intron | 45.0% | |
| AACAGCATAAATAGGGGAGG+GGG | - | chr1.1:1834225-1834244 | None:intergenic | 45.0% | |
| AACCACAGCAATGGTGCATA+CGG | - | chr1.1:1834795-1834814 | None:intergenic | 45.0% | |
| AAGCAAGGTTCAGCAGCAAT+AGG | + | chr1.1:1831715-1831734 | MS.gene27289:CDS | 45.0% | |
| ACCTTGCTTAACTGCTTCCA+TGG | - | chr1.1:1831704-1831723 | None:intergenic | 45.0% | |
| ACGATACCGACGTAACAACA+TGG | + | chr1.1:1831644-1831663 | MS.gene27289:CDS | 45.0% | |
| ACTAGAAGTCCAACGCCATA+AGG | - | chr1.1:1834554-1834573 | None:intergenic | 45.0% | |
| AGGGGTAGACCTCATAGTAA+TGG | + | chr1.1:1833585-1833604 | MS.gene27289:intron | 45.0% | |
| AGTGTCTCTGTTAGTGACTG+TGG | + | chr1.1:1832879-1832898 | MS.gene27289:intron | 45.0% | |
| CTCTATTACAACTGCCCAAG+CGG | + | chr1.1:1834602-1834621 | MS.gene27289:CDS | 45.0% | |
| CTGGAACGTCTTCTCTTTCA+AGG | + | chr1.1:1833716-1833735 | MS.gene27289:intron | 45.0% | |
| CTTAACTGAGTGGCTCACTT+TGG | + | chr1.1:1832202-1832221 | MS.gene27289:intron | 45.0% | |
| GCATAGAGAAATCCTGAAGG+GGG | + | chr1.1:1833904-1833923 | MS.gene27289:intron | 45.0% | |
| GGGGTAGACCTCATAGTAAT+GGG | + | chr1.1:1833586-1833605 | MS.gene27289:intron | 45.0% | |
| GTACAGAAGTTGTCCAACCT+GGG | + | chr1.1:1832752-1832771 | MS.gene27289:intron | 45.0% | |
| ! | AGTATTTTGCCTACCCAGGT+TGG | - | chr1.1:1832768-1832787 | None:intergenic | 45.0% |
| ! | GCCTTTCCACATTTTGGATC+AGG | + | chr1.1:1834826-1834845 | MS.gene27289:CDS | 45.0% |
| ! | TGGTGAGCCTTTCCACATTT+TGG | + | chr1.1:1834820-1834839 | MS.gene27289:CDS | 45.0% |
| !! | CAAAAGTATTAGCCCCCTTC+AGG | - | chr1.1:1833919-1833938 | None:intergenic | 45.0% |
| !! | CCTTTTGGTCTTTTTTGCGG+GGG | + | chr1.1:1832727-1832746 | MS.gene27289:intron | 45.0% |
| !! | TAGTGGTCTATCGACTCGAT+AGG | + | chr1.1:1833781-1833800 | MS.gene27289:intron | 45.0% |
| !!! | GAACCACGTGAGTTTTGGAT+CGG | - | chr1.1:1831744-1831763 | None:intergenic | 45.0% |
| AAAGTTGGACAGGGTGGGTA+TGG | + | chr1.1:1834375-1834394 | MS.gene27289:intron | 50.0% | |
| AAGTTGGACAGGGTGGGTAT+GGG | + | chr1.1:1834376-1834395 | MS.gene27289:intron | 50.0% | |
| ACAGACACTAAGGACCCGTT+TGG | - | chr1.1:1832479-1832498 | None:intergenic | 50.0% | |
| ACAGCATAAATAGGGGAGGG+GGG | - | chr1.1:1834224-1834243 | None:intergenic | 50.0% | |
| ACCAACTCCAACCACAGCAA+TGG | - | chr1.1:1834804-1834823 | None:intergenic | 50.0% | |
| ACCATTGCTGTGGTTGGAGT+TGG | + | chr1.1:1834800-1834819 | MS.gene27289:CDS | 50.0% | |
| AGAAGTTGTCCAACCTGGGT+AGG | + | chr1.1:1832756-1832775 | MS.gene27289:intron | 50.0% | |
| AGGTTTGCACTCAGCGATCA+TGG | + | chr1.1:1834522-1834541 | MS.gene27289:intron | 50.0% | |
| CACTAAGGACCCGTTTGGAT+TGG | - | chr1.1:1832474-1832493 | None:intergenic | 50.0% | |
| CCCCCGCAAAAAAGACCAAA+AGG | - | chr1.1:1832730-1832749 | None:intergenic | 50.0% | |
| CCTTGCAAGGTGAAAAGCTC+AGG | + | chr1.1:1834765-1834784 | MS.gene27289:CDS | 50.0% | |
| CGACGTAACAACATGGTCAC+CGG | + | chr1.1:1831651-1831670 | MS.gene27289:CDS | 50.0% | |
| CGCTTGGGCAGTTGTAATAG+AGG | - | chr1.1:1834604-1834623 | None:intergenic | 50.0% | |
| CGGTGACCATGTTGTTACGT+CGG | - | chr1.1:1831653-1831672 | None:intergenic | 50.0% | |
| CTGAACGACGAGTCTACCAA+CGG | - | chr1.1:1831941-1831960 | None:intergenic | 50.0% | |
| CTTCTTGACAAACACGACGG+AGG | - | chr1.1:1833152-1833171 | None:intergenic | 50.0% | |
| GCCATGGAAGCAGTTAAGCA+AGG | + | chr1.1:1831700-1831719 | MS.gene27289:CDS | 50.0% | |
| GCTTCTGGTGCAGATCAAAG+TGG | + | chr1.1:1834953-1834972 | MS.gene27289:CDS | 50.0% | |
| GGTACAGAAGTTGTCCAACC+TGG | + | chr1.1:1832751-1832770 | MS.gene27289:intron | 50.0% | |
| GTATGCACCATTGCTGTGGT+TGG | + | chr1.1:1834794-1834813 | MS.gene27289:CDS | 50.0% | |
| GTCTCTGTTAGTGACTGTGG+TGG | + | chr1.1:1832882-1832901 | MS.gene27289:intron | 50.0% | |
| TATGAATCTCCGCTTCCCGT+TGG | + | chr1.1:1831922-1831941 | MS.gene27289:CDS | 50.0% | |
| TCTCCATTGGAGAACCACCT+TGG | - | chr1.1:1834994-1835013 | None:intergenic | 50.0% | |
| TCTCCGATCCAAAACTCACG+TGG | + | chr1.1:1831738-1831757 | MS.gene27289:CDS | 50.0% | |
| TGAACGACGAGTCTACCAAC+GGG | - | chr1.1:1831940-1831959 | None:intergenic | 50.0% | |
| TGACCAAGGTGGTTCTCCAA+TGG | + | chr1.1:1834988-1835007 | MS.gene27289:CDS | 50.0% | |
| TTTGATCAGATCTTCCCGGG+AGG | - | chr1.1:1834720-1834739 | None:intergenic | 50.0% | |
| ! | CCTGAGCTTTTCACCTTGCA+AGG | - | chr1.1:1834768-1834787 | None:intergenic | 50.0% |
| !! | AGATCAAAGTGGTGCTGGTG+GGG | + | chr1.1:1834964-1834983 | MS.gene27289:CDS | 50.0% |
| !! | CAGATCAAAGTGGTGCTGGT+GGG | + | chr1.1:1834963-1834982 | MS.gene27289:CDS | 50.0% |
| !! | CGATCATGGAAGCGTCCTTA+TGG | + | chr1.1:1834536-1834555 | MS.gene27289:CDS | 50.0% |
| !!! | GGTTTTGAGGAGGGAAACAG+TGG | + | chr1.1:1833737-1833756 | MS.gene27289:intron | 50.0% |
| !!! | TTTGGTCTTTTTTGCGGGGG+AGG | + | chr1.1:1832730-1832749 | MS.gene27289:intron | 50.0% |
| ACAACTTCACAGCCTCCTCC+CGG | + | chr1.1:1834702-1834721 | MS.gene27289:CDS | 55.0% | |
| ACGAGTCTACCAACGGGAAG+CGG | - | chr1.1:1831934-1831953 | None:intergenic | 55.0% | |
| ACGGGAAAGAACACGGCCAT+CGG | - | chr1.1:1831866-1831885 | None:intergenic | 55.0% | |
| AGCATAAATAGGGGAGGGGG+GGG | - | chr1.1:1834222-1834241 | None:intergenic | 55.0% | |
| AGTTGGACAGGGTGGGTATG+GGG | + | chr1.1:1834377-1834396 | MS.gene27289:intron | 55.0% | |
| CAGCATAAATAGGGGAGGGG+GGG | - | chr1.1:1834223-1834242 | None:intergenic | 55.0% | |
| CGTAACAACATGGTCACCGG+CGG | + | chr1.1:1831654-1831673 | MS.gene27289:CDS | 55.0% | |
| CTCCGTATGCACCATTGCTG+TGG | + | chr1.1:1834790-1834809 | MS.gene27289:CDS | 55.0% | |
| CTTCCAGGTGGAATACGCCA+TGG | + | chr1.1:1831684-1831703 | MS.gene27289:CDS | 55.0% | |
| CTTCCATGGCGTATTCCACC+TGG | - | chr1.1:1831690-1831709 | None:intergenic | 55.0% | |
| GAAGTAGGGAGACTGGTGTG+CGG | + | chr1.1:1833326-1833345 | MS.gene27289:intron | 55.0% | |
| GCAACTAGGGAGTCCTTGCA+AGG | + | chr1.1:1834752-1834771 | MS.gene27289:CDS | 55.0% | |
| GGTGCAGATCAAAGTGGTGC+TGG | + | chr1.1:1834959-1834978 | MS.gene27289:CDS | 55.0% | |
| GTAACAACATGGTCACCGGC+GGG | + | chr1.1:1831655-1831674 | MS.gene27289:CDS | 55.0% | |
| TCGCCGATAAGGCTCAGGTT+AGG | + | chr1.1:1831962-1831981 | MS.gene27289:intron | 55.0% | |
| TGCACCAGAAGCCTGATCTG+TGG | - | chr1.1:1834945-1834964 | None:intergenic | 55.0% | |
| ! | CGCGAGAACCACGTGAGTTT+TGG | - | chr1.1:1831749-1831768 | None:intergenic | 55.0% |
| ! | GCAGATCAAAGTGGTGCTGG+TGG | + | chr1.1:1834962-1834981 | MS.gene27289:CDS | 55.0% |
| ! | GGCGTTGGACTTCTAGTAGC+TGG | + | chr1.1:1834557-1834576 | MS.gene27289:CDS | 55.0% |
| !! | TGGAAGCGTCCTTATGGCGT+TGG | + | chr1.1:1834542-1834561 | MS.gene27289:CDS | 55.0% |
| ACCTGGAAGAGTCTTCCCGC+CGG | - | chr1.1:1831673-1831692 | None:intergenic | 60.0% | |
| AGCTGCACCTGCTGAACCTG+AGG | + | chr1.1:1834898-1834917 | MS.gene27289:CDS | 60.0% | |
| CAACTTCACAGCCTCCTCCC+GGG | + | chr1.1:1834703-1834722 | MS.gene27289:CDS | 60.0% | |
| CATATCGGCGTTGCCATCGC+CGG | + | chr1.1:1831832-1831851 | MS.gene27289:CDS | 60.0% | |
| CGTCGTTCAGCTCGCCGATA+AGG | + | chr1.1:1831951-1831970 | MS.gene27289:CDS | 60.0% | |
| GATCAGATCTTCCCGGGAGG+AGG | - | chr1.1:1834717-1834736 | None:intergenic | 60.0% | |
| GCAGGATGCTGCCACAGATC+AGG | + | chr1.1:1834931-1834950 | MS.gene27289:CDS | 60.0% | |
| GCTGCCACAGATCAGGCTTC+TGG | + | chr1.1:1834938-1834957 | MS.gene27289:CDS | 60.0% | |
| GGAAAGAACACGGCCATCGG+CGG | - | chr1.1:1831863-1831882 | None:intergenic | 60.0% | |
| GTTGGACAGGGTGGGTATGG+GGG | + | chr1.1:1834378-1834397 | MS.gene27289:intron | 60.0% | |
| TCAGCTCGCCGATAAGGCTC+AGG | + | chr1.1:1831957-1831976 | MS.gene27289:CDS | 60.0% | |
| TTGGACAGGGTGGGTATGGG+GGG | + | chr1.1:1834379-1834398 | MS.gene27289:intron | 60.0% | |
| ACCGGCGGGAAGACTCTTCC+AGG | + | chr1.1:1831669-1831688 | MS.gene27289:CDS | 65.0% | |
| ACCTGAGGCTGCAGCTGAGC+AGG | + | chr1.1:1834913-1834932 | MS.gene27289:CDS | 65.0% | |
| GCTGCAGCCTCAGGTTCAGC+AGG | - | chr1.1:1834908-1834927 | None:intergenic | 65.0% | |
| GGCGGGAAGACTCTTCCAGG+TGG | + | chr1.1:1831672-1831691 | MS.gene27289:CDS | 65.0% | |
| TCCTGCTCAGCTGCAGCCTC+AGG | - | chr1.1:1834917-1834936 | None:intergenic | 65.0% | |
| ACGGCCATCGGCGGTGAGAC+CGG | - | chr1.1:1831854-1831873 | None:intergenic | 70.0% | |
| ATCGCCGGTCTCACCGCCGA+TGG | + | chr1.1:1831847-1831866 | MS.gene27289:CDS | 70.0% | |
| ATCGGCGGTGAGACCGGCGA+TGG | - | chr1.1:1831848-1831867 | None:intergenic | 70.0% | |
| GCTGGTGGGGCTGACCAAGG+TGG | + | chr1.1:1834977-1834996 | MS.gene27289:CDS | 70.0% | |
| !! | GGTGCTGGTGGGGCTGACCA+AGG | + | chr1.1:1834974-1834993 | MS.gene27289:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 1831628 | 1835018 | 1831628 | ID=MS.gene27289 |
| chr1.1 | mRNA | 1831628 | 1835018 | 1831628 | ID=MS.gene27289.t1;Parent=MS.gene27289 |
| chr1.1 | exon | 1831628 | 1831978 | 1831628 | ID=MS.gene27289.t1.exon1;Parent=MS.gene27289.t1 |
| chr1.1 | CDS | 1831628 | 1831978 | 1831628 | ID=cds.MS.gene27289.t1;Parent=MS.gene27289.t1 |
| chr1.1 | exon | 1834524 | 1835018 | 1834524 | ID=MS.gene27289.t1.exon2;Parent=MS.gene27289.t1 |
| chr1.1 | CDS | 1834524 | 1835018 | 1834524 | ID=cds.MS.gene27289.t1;Parent=MS.gene27289.t1 |
| Gene Sequence |
| Protein sequence |
