Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24253.t1 | XP_013466130.1 | 100 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 3.20E-133 | 484.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24253.t1 | P34066 | 85.9 | 241 | 34 | 0 | 1 | 241 | 1 | 241 | 8.5e-119 | 427.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24253.t1 | I3RZQ6 | 100.0 | 241 | 0 | 0 | 1 | 241 | 1 | 241 | 2.3e-133 | 484.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057145 | MS.gene24253 | 0.804181 | 2.44E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24253.t1 | MTR_1g022410 | 97.887 | 284 | 3 | 1 | 1 | 281 | 1 | 284 | 0.0 | 573 |
| MS.gene24253.t1 | MTR_4g012740 | 78.571 | 322 | 25 | 3 | 1 | 281 | 232 | 550 | 2.45e-163 | 465 |
| MS.gene24253.t1 | MTR_4g012740 | 64.773 | 88 | 16 | 2 | 1 | 73 | 1 | 88 | 1.48e-24 | 103 |
| MS.gene24253.t1 | MTR_4g012740 | 63.636 | 88 | 17 | 2 | 1 | 73 | 78 | 165 | 2.13e-24 | 102 |
| MS.gene24253.t1 | MTR_4g012740 | 63.636 | 88 | 17 | 2 | 1 | 73 | 155 | 242 | 2.13e-24 | 102 |
| MS.gene24253.t1 | MTR_4g057090 | 70.175 | 285 | 55 | 4 | 1 | 281 | 83 | 341 | 6.53e-124 | 357 |
| MS.gene24253.t1 | MTR_3g113730 | 87.805 | 164 | 18 | 1 | 118 | 281 | 4 | 165 | 3.77e-103 | 298 |
| MS.gene24253.t1 | MTR_1g112250 | 45.902 | 183 | 94 | 2 | 1 | 178 | 3 | 185 | 7.61e-47 | 157 |
| MS.gene24253.t1 | MTR_7g070070 | 38.785 | 214 | 125 | 3 | 5 | 214 | 4 | 215 | 3.96e-43 | 147 |
| MS.gene24253.t1 | MTR_5g016590 | 38.785 | 214 | 125 | 3 | 5 | 214 | 4 | 215 | 6.34e-43 | 147 |
| MS.gene24253.t1 | MTR_0167s0060 | 35.111 | 225 | 141 | 3 | 1 | 223 | 1 | 222 | 2.17e-41 | 143 |
| MS.gene24253.t1 | MTR_6g024135 | 40.838 | 191 | 108 | 3 | 6 | 193 | 8 | 196 | 1.02e-38 | 136 |
| MS.gene24253.t1 | MTR_2g060830 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 1.62e-38 | 135 |
| MS.gene24253.t1 | MTR_8g464460 | 35.217 | 230 | 143 | 5 | 6 | 230 | 9 | 237 | 2.25e-38 | 135 |
| MS.gene24253.t1 | MTR_8g075320 | 37.736 | 212 | 123 | 4 | 5 | 210 | 3 | 211 | 8.29e-38 | 134 |
| MS.gene24253.t1 | MTR_2g016050 | 35.681 | 213 | 128 | 4 | 4 | 210 | 2 | 211 | 4.33e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24253.t1 | AT1G47250 | 78.445 | 283 | 53 | 2 | 1 | 281 | 1 | 277 | 6.24e-160 | 446 |
| MS.gene24253.t1 | AT5G42790 | 86.134 | 238 | 33 | 0 | 1 | 238 | 1 | 238 | 6.61e-159 | 443 |
| MS.gene24253.t1 | AT1G53850 | 38.819 | 237 | 135 | 4 | 1 | 232 | 3 | 234 | 2.41e-46 | 155 |
| MS.gene24253.t1 | AT1G53850 | 38.819 | 237 | 135 | 4 | 1 | 232 | 3 | 234 | 2.41e-46 | 155 |
| MS.gene24253.t1 | AT3G14290 | 45.355 | 183 | 95 | 2 | 1 | 178 | 3 | 185 | 2.44e-46 | 155 |
| MS.gene24253.t1 | AT3G22110 | 36.017 | 236 | 141 | 4 | 5 | 232 | 4 | 237 | 2.43e-43 | 148 |
| MS.gene24253.t1 | AT1G16470 | 36.444 | 225 | 138 | 3 | 1 | 223 | 1 | 222 | 2.39e-40 | 140 |
| MS.gene24253.t1 | AT1G16470 | 36.444 | 225 | 138 | 3 | 1 | 223 | 1 | 222 | 2.39e-40 | 140 |
| MS.gene24253.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene24253.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene24253.t1 | AT1G79210 | 36.000 | 225 | 139 | 3 | 1 | 223 | 1 | 222 | 7.19e-40 | 139 |
| MS.gene24253.t1 | AT5G35590 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 1.95e-38 | 135 |
| MS.gene24253.t1 | AT5G66140 | 38.208 | 212 | 122 | 4 | 5 | 210 | 3 | 211 | 4.08e-37 | 132 |
| MS.gene24253.t1 | AT2G05840 | 34.348 | 230 | 145 | 5 | 6 | 230 | 9 | 237 | 4.32e-37 | 132 |
| MS.gene24253.t1 | AT3G51260 | 37.264 | 212 | 124 | 4 | 5 | 210 | 3 | 211 | 5.50e-36 | 129 |
| MS.gene24253.t1 | AT3G51260 | 37.264 | 212 | 124 | 4 | 5 | 210 | 3 | 211 | 6.42e-36 | 129 |
| MS.gene24253.t1 | AT2G05840 | 36.181 | 199 | 123 | 3 | 6 | 200 | 9 | 207 | 1.40e-35 | 127 |
| MS.gene24253.t1 | AT2G27020 | 37.895 | 190 | 115 | 2 | 6 | 193 | 8 | 196 | 8.12e-35 | 126 |
| MS.gene24253.t1 | AT2G05840 | 36.170 | 188 | 116 | 3 | 6 | 189 | 9 | 196 | 1.18e-33 | 122 |
| MS.gene24253.t1 | AT2G27020 | 37.895 | 190 | 115 | 2 | 6 | 193 | 110 | 298 | 1.77e-33 | 125 |
| MS.gene24253.t1 | AT4G15165 | 33.654 | 208 | 87 | 7 | 5 | 204 | 4 | 168 | 2.35e-25 | 100 |
Find 83 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGAGCCTTTCCACATTT+TGG | 0.215333 | 1.1:+1823163 | MS.gene24253:CDS |
| CGCGAGAACCACGTGAGTTT+TGG | 0.220139 | 1.1:-1820090 | None:intergenic |
| ACAAGCTGCAAAGACATATT+TGG | 0.303194 | 1.1:+1823010 | MS.gene24253:CDS |
| TCCTGCTCAGCTGCAGCCTC+AGG | 0.321152 | 1.1:-1823257 | None:intergenic |
| TAACCTAACCTGAGCCTTAT+CGG | 0.340591 | 1.1:-1820309 | None:intergenic |
| GCTGCCACAGATCAGGCTTC+TGG | 0.352014 | 1.1:+1823281 | MS.gene24253:CDS |
| CGATCATGGAAGCGTCCTTA+TGG | 0.372743 | 1.1:+1822879 | MS.gene24253:CDS |
| GTAGCTGGATTAGATGAATC+AGG | 0.390011 | 1.1:+1822915 | MS.gene24253:CDS |
| ATGAGAAGAGAGTTCAGAAT+TGG | 0.397456 | 1.1:-1820126 | None:intergenic |
| GGCGTTGGACTTCTAGTAGC+TGG | 0.403744 | 1.1:+1822900 | MS.gene24253:CDS |
| CGCTTGGGCAGTTGTAATAG+AGG | 0.407257 | 1.1:-1822944 | None:intergenic |
| GCTGCAGCCTCAGGTTCAGC+AGG | 0.411570 | 1.1:-1823248 | None:intergenic |
| ACCTGAGGCTGCAGCTGAGC+AGG | 0.426509 | 1.1:+1823256 | MS.gene24253:CDS |
| TCATCAGAAGAAGATCTTCA+AGG | 0.432131 | 1.1:+1820145 | MS.gene24253:CDS |
| GCAGGATGCTGCCACAGATC+AGG | 0.446173 | 1.1:+1823274 | MS.gene24253:CDS |
| TTAAATTATCAAATCTCCAT+TGG | 0.446472 | 1.1:-1823347 | None:intergenic |
| AAGCAAGGTTCAGCAGCAAT+AGG | 0.446969 | 1.1:+1820059 | MS.gene24253:CDS |
| ACCGGCGGGAAGACTCTTCC+AGG | 0.447398 | 1.1:+1820013 | MS.gene24253:CDS |
| CATCTTTGATCAGATCTTCC+CGG | 0.448900 | 1.1:-1823064 | None:intergenic |
| CAGATCAAAGTGGTGCTGGT+GGG | 0.452356 | 1.1:+1823306 | MS.gene24253:CDS |
| CCTTGCAAGGTGAAAAGCTC+AGG | 0.463589 | 1.1:+1823108 | MS.gene24253:CDS |
| GCATTCAGATCTCATGTAAC+GGG | 0.468182 | 1.1:-1820225 | None:intergenic |
| GATCAGATCTTCCCGGGAGG+AGG | 0.468370 | 1.1:-1823057 | None:intergenic |
| ACGGCCATCGGCGGTGAGAC+CGG | 0.470971 | 1.1:-1820195 | None:intergenic |
| GGTGCTGGTGGGGCTGACCA+AGG | 0.471608 | 1.1:+1823317 | MS.gene24253:CDS |
| GCAGATCAAAGTGGTGCTGG+TGG | 0.482449 | 1.1:+1823305 | MS.gene24253:CDS |
| CGTCGTTCAGCTCGCCGATA+AGG | 0.485800 | 1.1:+1820295 | MS.gene24253:CDS |
| ATTCAAAATAGTTTCCGCTT+GGG | 0.489662 | 1.1:-1822959 | None:intergenic |
| ACTAGAAGTCCAACGCCATA+AGG | 0.491926 | 1.1:-1822894 | None:intergenic |
| AGGTTTGCACTCAGCGATCA+TGG | 0.494067 | 1.1:+1822865 | MS.gene24253:intron |
| ACAACTTCACAGCCTCCTCC+CGG | 0.497935 | 1.1:+1823045 | MS.gene24253:CDS |
| GAATATCAGGCATTTGCAAT+CGG | 0.498552 | 1.1:+1822978 | MS.gene24253:CDS |
| CTTCCATGGCGTATTCCACC+TGG | 0.500589 | 1.1:-1820031 | None:intergenic |
| TATTCAAAATAGTTTCCGCT+TGG | 0.508568 | 1.1:-1822960 | None:intergenic |
| ACCATTGCTGTGGTTGGAGT+TGG | 0.514251 | 1.1:+1823143 | MS.gene24253:CDS |
| TTCAAGGTTGATGATCATAT+CGG | 0.515192 | 1.1:+1820161 | MS.gene24253:CDS |
| ATCTTTGATCAGATCTTCCC+GGG | 0.521887 | 1.1:-1823063 | None:intergenic |
| AAGATGCACTCATTGCAACT+AGG | 0.529448 | 1.1:+1823081 | MS.gene24253:CDS |
| AGATCAAAGTGGTGCTGGTG+GGG | 0.531118 | 1.1:+1823307 | MS.gene24253:CDS |
| GGTGCAGATCAAAGTGGTGC+TGG | 0.531835 | 1.1:+1823302 | MS.gene24253:CDS |
| TGGAAGCGTCCTTATGGCGT+TGG | 0.534162 | 1.1:+1822885 | MS.gene24253:CDS |
| AACCACAGCAATGGTGCATA+CGG | 0.536605 | 1.1:-1823135 | None:intergenic |
| CTCTATTACAACTGCCCAAG+CGG | 0.540260 | 1.1:+1822945 | MS.gene24253:CDS |
| ACGAGTCTACCAACGGGAAG+CGG | 0.541672 | 1.1:-1820275 | None:intergenic |
| AGATGCACTCATTGCAACTA+GGG | 0.552459 | 1.1:+1823082 | MS.gene24253:CDS |
| TCAGCTCGCCGATAAGGCTC+AGG | 0.552948 | 1.1:+1820301 | MS.gene24253:CDS |
| CATATCGGCGTTGCCATCGC+CGG | 0.553468 | 1.1:+1820176 | MS.gene24253:CDS |
| GTATGCACCATTGCTGTGGT+TGG | 0.557714 | 1.1:+1823137 | MS.gene24253:CDS |
| ATCGCCGGTCTCACCGCCGA+TGG | 0.557766 | 1.1:+1820191 | MS.gene24253:CDS |
| ACCTTGCTTAACTGCTTCCA+TGG | 0.560856 | 1.1:-1820045 | None:intergenic |
| TGCATTCAGATCTCATGTAA+CGG | 0.564752 | 1.1:-1820226 | None:intergenic |
| CGACGTAACAACATGGTCAC+CGG | 0.568536 | 1.1:+1819995 | MS.gene24253:CDS |
| TGAACGACGAGTCTACCAAC+GGG | 0.572203 | 1.1:-1820281 | None:intergenic |
| TAGCTGGATTAGATGAATCA+GGG | 0.572392 | 1.1:+1822916 | MS.gene24253:CDS |
| ACGGGAAAGAACACGGCCAT+CGG | 0.576909 | 1.1:-1820207 | None:intergenic |
| CAGTTTCCTGATCCAAAATG+TGG | 0.582560 | 1.1:-1823175 | None:intergenic |
| TATGAATCTCCGCTTCCCGT+TGG | 0.585267 | 1.1:+1820266 | MS.gene24253:CDS |
| AGCTGCACCTGCTGAACCTG+AGG | 0.586152 | 1.1:+1823241 | MS.gene24253:CDS |
| CAACTTCACAGCCTCCTCCC+GGG | 0.586785 | 1.1:+1823046 | MS.gene24253:CDS |
| TGACCAAGGTGGTTCTCCAA+TGG | 0.586988 | 1.1:+1823331 | MS.gene24253:CDS |
| ATCGGCGGTGAGACCGGCGA+TGG | 0.592757 | 1.1:-1820189 | None:intergenic |
| TCCTGATCCAAAATGTGGAA+AGG | 0.593184 | 1.1:-1823170 | None:intergenic |
| ACCAACTCCAACCACAGCAA+TGG | 0.594452 | 1.1:-1823144 | None:intergenic |
| GCTGGTGGGGCTGACCAAGG+TGG | 0.603851 | 1.1:+1823320 | MS.gene24253:CDS |
| CTTCCAGGTGGAATACGCCA+TGG | 0.612270 | 1.1:+1820028 | MS.gene24253:CDS |
| CTCCGTATGCACCATTGCTG+TGG | 0.615712 | 1.1:+1823133 | MS.gene24253:CDS |
| GCAACTAGGGAGTCCTTGCA+AGG | 0.618439 | 1.1:+1823095 | MS.gene24253:CDS |
| TCTCCATTGGAGAACCACCT+TGG | 0.619130 | 1.1:-1823334 | None:intergenic |
| ACCTGGAAGAGTCTTCCCGC+CGG | 0.625765 | 1.1:-1820014 | None:intergenic |
| GTAACAACATGGTCACCGGC+GGG | 0.626802 | 1.1:+1819999 | MS.gene24253:CDS |
| CGTAACAACATGGTCACCGG+CGG | 0.638962 | 1.1:+1819998 | MS.gene24253:CDS |
| GGAAAGAACACGGCCATCGG+CGG | 0.645115 | 1.1:-1820204 | None:intergenic |
| TGCACCAGAAGCCTGATCTG+TGG | 0.645294 | 1.1:-1823285 | None:intergenic |
| TCATGTAACGGGAAAGAACA+CGG | 0.645339 | 1.1:-1820214 | None:intergenic |
| CTGAACGACGAGTCTACCAA+CGG | 0.653690 | 1.1:-1820282 | None:intergenic |
| ACGATACCGACGTAACAACA+TGG | 0.654506 | 1.1:+1819988 | MS.gene24253:CDS |
| GCCATGGAAGCAGTTAAGCA+AGG | 0.656151 | 1.1:+1820044 | MS.gene24253:CDS |
| AGCTGGATTAGATGAATCAG+GGG | 0.660204 | 1.1:+1822917 | MS.gene24253:CDS |
| CGGTGACCATGTTGTTACGT+CGG | 0.692398 | 1.1:-1819994 | None:intergenic |
| GCTTCTGGTGCAGATCAAAG+TGG | 0.697173 | 1.1:+1823296 | MS.gene24253:CDS |
| GGCGGGAAGACTCTTCCAGG+TGG | 0.706418 | 1.1:+1820016 | MS.gene24253:CDS |
| TCTCCGATCCAAAACTCACG+TGG | 0.728289 | 1.1:+1820082 | MS.gene24253:CDS |
| TTTGATCAGATCTTCCCGGG+AGG | 0.729135 | 1.1:-1823060 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTAAATTAAGTAATTTTAA+TGG | + | chr1.1:1820435-1820454 | MS.gene24253:intron | 10.0% |
| !! | AAATAATAACAAAATCAAAC+AGG | - | chr1.1:1821168-1821187 | None:intergenic | 15.0% |
| !! | ATTCAATAAACTAAAACATT+TGG | + | chr1.1:1822629-1822648 | MS.gene24253:intron | 15.0% |
| !! | TTCTCTAATGTTTATTATAT+AGG | + | chr1.1:1820997-1821016 | MS.gene24253:intron | 15.0% |
| !!! | ACTATTTTGTATACTTAATA+TGG | + | chr1.1:1821647-1821666 | MS.gene24253:intron | 15.0% |
| !! | AAACATTAGAGAATACATTT+CGG | - | chr1.1:1820990-1821009 | None:intergenic | 20.0% |
| !! | AAATACAGTGTTAACAAAAA+GGG | - | chr1.1:1820582-1820601 | None:intergenic | 20.0% |
| !! | ATATAGAAACAGCATAAATA+GGG | - | chr1.1:1822574-1822593 | None:intergenic | 20.0% |
| !! | ATATTACATGGAAAAGAATA+AGG | + | chr1.1:1822771-1822790 | MS.gene24253:intron | 20.0% |
| !! | CAAAATTACATCATAAATAC+TGG | - | chr1.1:1822839-1822858 | None:intergenic | 20.0% |
| !! | TATATAGAAACAGCATAAAT+AGG | - | chr1.1:1822575-1822594 | None:intergenic | 20.0% |
| !! | TTTAACTCAGTAATTCAATT+AGG | + | chr1.1:1820413-1820432 | MS.gene24253:intron | 20.0% |
| !!! | ATTTATGATGTAATTTTGAG+TGG | + | chr1.1:1822841-1822860 | MS.gene24253:intron | 20.0% |
| !!! | GTGTTTTATTAATAGAAAGT+TGG | + | chr1.1:1822702-1822721 | MS.gene24253:intron | 20.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr1.1:1820805-1820824 | MS.gene24253:intron | 25.0% |
| ! | AAAATACTATGATGCTTCTA+TGG | + | chr1.1:1821124-1821143 | MS.gene24253:intron | 25.0% |
| ! | ACACACATTTATATACTTCT+GGG | - | chr1.1:1821573-1821592 | None:intergenic | 25.0% |
| ! | AGGTACAAAAATTATTTCAC+AGG | - | chr1.1:1821475-1821494 | None:intergenic | 25.0% |
| ! | ATTTATATACTTCTGGGTAT+AGG | - | chr1.1:1821567-1821586 | None:intergenic | 25.0% |
| ! | CAAATACAGTGTTAACAAAA+AGG | - | chr1.1:1820583-1820602 | None:intergenic | 25.0% |
| ! | GTATACTTAATATGGAAGTA+GGG | + | chr1.1:1821655-1821674 | MS.gene24253:intron | 25.0% |
| ! | TAGTCGAGATTATTTACTTT+AGG | + | chr1.1:1820521-1820540 | MS.gene24253:intron | 25.0% |
| ! | TATAGAAACAGCATAAATAG+GGG | - | chr1.1:1822573-1822592 | None:intergenic | 25.0% |
| ! | TATTAATAGAAAGTTGGACA+GGG | + | chr1.1:1822708-1822727 | MS.gene24253:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr1.1:1820693-1820712 | MS.gene24253:intron | 25.0% |
| ! | TGTATACTTAATATGGAAGT+AGG | + | chr1.1:1821654-1821673 | MS.gene24253:intron | 25.0% |
| ! | TGTTCGGATTATTCTAATTA+GGG | + | chr1.1:1820360-1820379 | MS.gene24253:intron | 25.0% |
| ! | TTATTAATAGAAAGTTGGAC+AGG | + | chr1.1:1822707-1822726 | MS.gene24253:intron | 25.0% |
| ! | TTGAATGAATTAAATAGACC+AGG | - | chr1.1:1822615-1822634 | None:intergenic | 25.0% |
| ! | TTGTTCGGATTATTCTAATT+AGG | + | chr1.1:1820359-1820378 | MS.gene24253:intron | 25.0% |
| !! | AAACGTTTGAAACTATGTTT+AGG | + | chr1.1:1820949-1820968 | MS.gene24253:intron | 25.0% |
| !! | ATCATACTCTTTTTGATGTT+TGG | + | chr1.1:1821395-1821414 | MS.gene24253:intron | 25.0% |
| !! | ATTTGGTTAGTTAATCAACA+TGG | + | chr1.1:1822646-1822665 | MS.gene24253:intron | 25.0% |
| !! | GATTTGACTTAACTCTTATT+GGG | + | chr1.1:1822480-1822499 | MS.gene24253:intron | 25.0% |
| !! | TGATTTGACTTAACTCTTAT+TGG | + | chr1.1:1822479-1822498 | MS.gene24253:intron | 25.0% |
| !! | TTTCAGTTTTCAACTTTTGT+TGG | + | chr1.1:1820842-1820861 | MS.gene24253:intron | 25.0% |
| !!! | CATCAAAAAGAGTATGATTT+TGG | - | chr1.1:1821393-1821412 | None:intergenic | 25.0% |
| !!! | TAAAGTGTTAACAACACTTT+TGG | + | chr1.1:1822536-1822555 | MS.gene24253:intron | 25.0% |
| !!! | TGACAGTCATTTTGTATTTA+AGG | - | chr1.1:1822010-1822029 | None:intergenic | 25.0% |
| !!! | TGTAAATGTTGTTTTGATAG+TGG | + | chr1.1:1821748-1821767 | MS.gene24253:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr1.1:1820806-1820825 | MS.gene24253:intron | 30.0% | |
| ACGGTGTAGTTATTCAAATT+GGG | + | chr1.1:1821834-1821853 | MS.gene24253:intron | 30.0% | |
| ATAGTTACTATATGTGAACC+TGG | + | chr1.1:1822594-1822613 | MS.gene24253:intron | 30.0% | |
| ATCTTGTCTTGCATATTACA+TGG | + | chr1.1:1822759-1822778 | MS.gene24253:intron | 30.0% | |
| ATTCAAAATAGTTTCCGCTT+GGG | - | chr1.1:1822962-1822981 | None:intergenic | 30.0% | |
| CAAAAATAAGCCAATCCAAA+TGG | - | chr1.1:1820645-1820664 | None:intergenic | 30.0% | |
| CACACACATTTATATACTTC+TGG | - | chr1.1:1821574-1821593 | None:intergenic | 30.0% | |
| CATATGATAGAGATTAGAGA+CGG | + | chr1.1:1821802-1821821 | MS.gene24253:intron | 30.0% | |
| GACAGTGATTAGAATGAAAT+GGG | + | chr1.1:1820602-1820621 | MS.gene24253:intron | 30.0% | |
| TAATTGTGATTGAGAGAAGA+TGG | + | chr1.1:1820898-1820917 | MS.gene24253:intron | 30.0% | |
| TACGGTGTAGTTATTCAAAT+TGG | + | chr1.1:1821833-1821852 | MS.gene24253:intron | 30.0% | |
| TATCTTACTTTCATTCTCTG+TGG | + | chr1.1:1821967-1821986 | MS.gene24253:intron | 30.0% | |
| TATTCAAAATAGTTTCCGCT+TGG | - | chr1.1:1822963-1822982 | None:intergenic | 30.0% | |
| TGACAGTGATTAGAATGAAA+TGG | + | chr1.1:1820601-1820620 | MS.gene24253:intron | 30.0% | |
| TGATTTACTTAGCATTGTAG+TGG | + | chr1.1:1822108-1822127 | MS.gene24253:intron | 30.0% | |
| TTGAATGTCTTGAGAATTTG+AGG | + | chr1.1:1821186-1821205 | MS.gene24253:intron | 30.0% | |
| ! | CAGAAGTATATAAATGTGTG+TGG | + | chr1.1:1821572-1821591 | MS.gene24253:intron | 30.0% |
| ! | CTTTTTGATGTTTGGTTGTT+TGG | + | chr1.1:1821403-1821422 | MS.gene24253:intron | 30.0% |
| !! | ATCACTTTTGAGCTGTTATT+TGG | + | chr1.1:1821619-1821638 | MS.gene24253:intron | 30.0% |
| !! | ATCTAGAGGGAGTATATTTT+CGG | + | chr1.1:1820926-1820945 | MS.gene24253:intron | 30.0% |
| !! | CGGAAACTATTTTGAATATC+AGG | + | chr1.1:1822965-1822984 | MS.gene24253:CDS | 30.0% |
| !! | GATTTGATTTGTTATGCTTG+TGG | + | chr1.1:1820479-1820498 | MS.gene24253:intron | 30.0% |
| !! | GTATGATTTTGGCAAAATCA+CGG | - | chr1.1:1821382-1821401 | None:intergenic | 30.0% |
| !! | TAACTTGCTTGTAGAATAAC+TGG | + | chr1.1:1822401-1822420 | MS.gene24253:intron | 30.0% |
| !! | TGTTTTGTTACGATCCATTA+TGG | + | chr1.1:1821899-1821918 | MS.gene24253:intron | 30.0% |
| !! | TTCAAGGTTGATGATCATAT+CGG | + | chr1.1:1820161-1820180 | MS.gene24253:CDS | 30.0% |
| !!! | AATTGTAGCTAGGGTTTTTT+AGG | + | chr1.1:1820389-1820408 | MS.gene24253:intron | 30.0% |
| !!! | ATTGTAGCTAGGGTTTTTTA+GGG | + | chr1.1:1820390-1820409 | MS.gene24253:intron | 30.0% |
| !!! | GAGAATTTGAGGTTTTTAGT+TGG | + | chr1.1:1821197-1821216 | MS.gene24253:intron | 30.0% |
| !!! | TGATACTTTTGAGATTGTGA+GGG | + | chr1.1:1823211-1823230 | MS.gene24253:CDS | 30.0% |
| !!! | TTGATACTTTTGAGATTGTG+AGG | + | chr1.1:1823210-1823229 | MS.gene24253:CDS | 30.0% |
| ACAAGCTGCAAAGACATATT+TGG | + | chr1.1:1823010-1823029 | MS.gene24253:CDS | 35.0% | |
| ACAGAGGTAAAAACGGAAAA+CGG | - | chr1.1:1820339-1820358 | None:intergenic | 35.0% | |
| AGAATAATCCGAACAAACAG+AGG | - | chr1.1:1820355-1820374 | None:intergenic | 35.0% | |
| AGTTCCGTTGACATTCATTA+GGG | - | chr1.1:1821873-1821892 | None:intergenic | 35.0% | |
| ATATACTTCTGGGTATAGGT+TGG | - | chr1.1:1821563-1821582 | None:intergenic | 35.0% | |
| ATCCATTATGGATGTTCTAG+GGG | + | chr1.1:1821911-1821930 | MS.gene24253:intron | 35.0% | |
| ATGAGAAGAGAGTTCAGAAT+TGG | - | chr1.1:1820129-1820148 | None:intergenic | 35.0% | |
| ATGCATAGAGAAATCCTGAA+GGG | + | chr1.1:1822246-1822265 | MS.gene24253:intron | 35.0% | |
| ATGTCATTCTTTGATGCATC+TGG | + | chr1.1:1822041-1822060 | MS.gene24253:intron | 35.0% | |
| CAGTGTTAACAAAAAGGGTT+TGG | - | chr1.1:1820577-1820596 | None:intergenic | 35.0% | |
| CGAACAAACAGAGGTAAAAA+CGG | - | chr1.1:1820346-1820365 | None:intergenic | 35.0% | |
| CGGTAAGTTTGACAAAATCA+CGG | + | chr1.1:1821311-1821330 | MS.gene24253:intron | 35.0% | |
| GAAAACTGAAACAGACACTA+AGG | - | chr1.1:1820833-1820852 | None:intergenic | 35.0% | |
| GAATATCAGGCATTTGCAAT+CGG | + | chr1.1:1822978-1822997 | MS.gene24253:CDS | 35.0% | |
| GATCCATTATGGATGTTCTA+GGG | + | chr1.1:1821910-1821929 | MS.gene24253:intron | 35.0% | |
| GGTAAGTTTGACAAAATCAC+GGG | + | chr1.1:1821312-1821331 | MS.gene24253:intron | 35.0% | |
| TATGATGCTTCTATGGTGTT+TGG | + | chr1.1:1821131-1821150 | MS.gene24253:intron | 35.0% | |
| TCATCAGAAGAAGATCTTCA+AGG | + | chr1.1:1820145-1820164 | MS.gene24253:CDS | 35.0% | |
| TGCATTCAGATCTCATGTAA+CGG | - | chr1.1:1820229-1820248 | None:intergenic | 35.0% | |
| TGTAAGATTCAGTGTCCATT+TGG | + | chr1.1:1820627-1820646 | MS.gene24253:intron | 35.0% | |
| TTCACTTTCCCATTACTATG+AGG | - | chr1.1:1821941-1821960 | None:intergenic | 35.0% | |
| ! | AGTTTTCAACTTTTGTTGGC+TGG | + | chr1.1:1820846-1820865 | MS.gene24253:intron | 35.0% |
| ! | CGTTTTTACCTCTGTTTGTT+CGG | + | chr1.1:1820344-1820363 | MS.gene24253:intron | 35.0% |
| ! | CTAATGACACGTTCTACTTT+TGG | - | chr1.1:1821043-1821062 | None:intergenic | 35.0% |
| ! | TAGCTGGATTAGATGAATCA+GGG | + | chr1.1:1822916-1822935 | MS.gene24253:CDS | 35.0% |
| ! | TCTTCTCTTTCAAGGTTTTG+AGG | + | chr1.1:1822068-1822087 | MS.gene24253:intron | 35.0% |
| !! | ACTTTAGGATCTTAACTGAG+TGG | + | chr1.1:1820536-1820555 | MS.gene24253:intron | 35.0% |
| !! | ATGATGTAATTTTGAGTGGC+AGG | + | chr1.1:1822845-1822864 | MS.gene24253:intron | 35.0% |
| !! | TCATTAGTTTCCTCTCCTTT+TGG | + | chr1.1:1821056-1821075 | MS.gene24253:intron | 35.0% |
| !! | TCTCCTTTTGGTCTTTTTTG+CGG | + | chr1.1:1821068-1821087 | MS.gene24253:intron | 35.0% |
| !!! | AGGGTTTTGAAATTGTAGCT+AGG | + | chr1.1:1820379-1820398 | MS.gene24253:intron | 35.0% |
| !!! | GGGTTTTGAAATTGTAGCTA+GGG | + | chr1.1:1820380-1820399 | MS.gene24253:intron | 35.0% |
| AAACAGCATAAATAGGGGAG+GGG | - | chr1.1:1822568-1822587 | None:intergenic | 40.0% | |
| AAGATGCACTCATTGCAACT+AGG | + | chr1.1:1823081-1823100 | MS.gene24253:CDS | 40.0% | |
| AATAGAAAGTTGGACAGGGT+GGG | + | chr1.1:1822712-1822731 | MS.gene24253:intron | 40.0% | |
| AGAAACAGCATAAATAGGGG+AGG | - | chr1.1:1822570-1822589 | None:intergenic | 40.0% | |
| AGAAGATGGAAGCAATCTAG+AGG | + | chr1.1:1820912-1820931 | MS.gene24253:intron | 40.0% | |
| AGATGCACTCATTGCAACTA+GGG | + | chr1.1:1823082-1823101 | MS.gene24253:CDS | 40.0% | |
| ATCTTTGATCAGATCTTCCC+GGG | - | chr1.1:1823066-1823085 | None:intergenic | 40.0% | |
| ATTGTCTAAACTGTCGTGAG+AGG | + | chr1.1:1822170-1822189 | MS.gene24253:intron | 40.0% | |
| CAGTTCCGTTGACATTCATT+AGG | - | chr1.1:1821874-1821893 | None:intergenic | 40.0% | |
| CAGTTTCCTGATCCAAAATG+TGG | - | chr1.1:1823178-1823197 | None:intergenic | 40.0% | |
| CATCTTTGATCAGATCTTCC+CGG | - | chr1.1:1823067-1823086 | None:intergenic | 40.0% | |
| CATGCATAGAGAAATCCTGA+AGG | + | chr1.1:1822245-1822264 | MS.gene24253:intron | 40.0% | |
| CGATCCATTATGGATGTTCT+AGG | + | chr1.1:1821909-1821928 | MS.gene24253:intron | 40.0% | |
| CGGTTGGCAAAAACTAAGTT+TGG | - | chr1.1:1821362-1821381 | None:intergenic | 40.0% | |
| CTTACTTTCATTCTCTGTGG+AGG | + | chr1.1:1821970-1821989 | MS.gene24253:intron | 40.0% | |
| GAAACAGCATAAATAGGGGA+GGG | - | chr1.1:1822569-1822588 | None:intergenic | 40.0% | |
| GAAGATGGAAGCAATCTAGA+GGG | + | chr1.1:1820913-1820932 | MS.gene24253:intron | 40.0% | |
| GATTCAGTGTCCATTTGGAT+TGG | + | chr1.1:1820632-1820651 | MS.gene24253:intron | 40.0% | |
| GCAAAAAAGACCAAAAGGAG+AGG | - | chr1.1:1821069-1821088 | None:intergenic | 40.0% | |
| GCATTCAGATCTCATGTAAC+GGG | - | chr1.1:1820228-1820247 | None:intergenic | 40.0% | |
| TAATAGAAAGTTGGACAGGG+TGG | + | chr1.1:1822711-1822730 | MS.gene24253:intron | 40.0% | |
| TAATATGGAAGTAGGGAGAC+TGG | + | chr1.1:1821662-1821681 | MS.gene24253:intron | 40.0% | |
| TACCCCTAGAACATCCATAA+TGG | - | chr1.1:1821916-1821935 | None:intergenic | 40.0% | |
| TACGCTGTTGTGTTGTCTTA+TGG | + | chr1.1:1822340-1822359 | MS.gene24253:intron | 40.0% | |
| TCCTGATCCAAAATGTGGAA+AGG | - | chr1.1:1823173-1823192 | None:intergenic | 40.0% | |
| TGCACCCTAATGAATGTCAA+CGG | + | chr1.1:1821866-1821885 | MS.gene24253:intron | 40.0% | |
| TGCATAGAGAAATCCTGAAG+GGG | + | chr1.1:1822247-1822266 | MS.gene24253:intron | 40.0% | |
| TGTAGAATAACTGGCTGAAC+AGG | + | chr1.1:1822410-1822429 | MS.gene24253:intron | 40.0% | |
| TGTCTTCTTGACAAACACGA+CGG | - | chr1.1:1821498-1821517 | None:intergenic | 40.0% | |
| TGTTGTCTTATGGTGTGAAG+TGG | + | chr1.1:1822350-1822369 | MS.gene24253:intron | 40.0% | |
| TTAGAGACGGAGTTAGACTA+CGG | + | chr1.1:1821815-1821834 | MS.gene24253:intron | 40.0% | |
| ! | AGCTGGATTAGATGAATCAG+GGG | + | chr1.1:1822917-1822936 | MS.gene24253:CDS | 40.0% |
| ! | GTAGCTGGATTAGATGAATC+AGG | + | chr1.1:1822915-1822934 | MS.gene24253:CDS | 40.0% |
| ! | TAACCTAACCTGAGCCTTAT+CGG | - | chr1.1:1820312-1820331 | None:intergenic | 40.0% |
| ! | TCATAGTATTTTGCCTACCC+AGG | - | chr1.1:1821116-1821135 | None:intergenic | 40.0% |
| ! | TCATGTAACGGGAAAGAACA+CGG | - | chr1.1:1820217-1820236 | None:intergenic | 40.0% |
| ! | TTGTTGCTTGTGTGAAATGG+CGG | + | chr1.1:1821291-1821310 | MS.gene24253:intron | 40.0% |
| !! | CTCCTTTTGGTCTTTTTTGC+GGG | + | chr1.1:1821069-1821088 | MS.gene24253:intron | 40.0% |
| !! | GACTTGTTGCTTGTGTGAAA+TGG | + | chr1.1:1821288-1821307 | MS.gene24253:intron | 40.0% |
| !! | GATTTTGGCAAAATCACGGT+TGG | - | chr1.1:1821378-1821397 | None:intergenic | 40.0% |
| !! | TCCTTTTGGTCTTTTTTGCG+GGG | + | chr1.1:1821070-1821089 | MS.gene24253:intron | 40.0% |
| !!! | CTCTTTCAAGGTTTTGAGGA+GGG | + | chr1.1:1822072-1822091 | MS.gene24253:intron | 40.0% |
| !!! | GTTTGCTGACTCTTGTTTTC+TGG | + | chr1.1:1821261-1821280 | MS.gene24253:intron | 40.0% |
| !!! | TACTTTTGAGATTGTGAGGG+AGG | + | chr1.1:1823214-1823233 | MS.gene24253:CDS | 40.0% |
| !!! | TCTCTTTCAAGGTTTTGAGG+AGG | + | chr1.1:1822071-1822090 | MS.gene24253:intron | 40.0% |
| AAACTGTCGTGAGAGGCTAT+TGG | + | chr1.1:1822177-1822196 | MS.gene24253:intron | 45.0% | |
| AACAGCATAAATAGGGGAGG+GGG | - | chr1.1:1822567-1822586 | None:intergenic | 45.0% | |
| AACCACAGCAATGGTGCATA+CGG | - | chr1.1:1823138-1823157 | None:intergenic | 45.0% | |
| AAGCAAGGTTCAGCAGCAAT+AGG | + | chr1.1:1820059-1820078 | MS.gene24253:CDS | 45.0% | |
| ACCTTGCTTAACTGCTTCCA+TGG | - | chr1.1:1820048-1820067 | None:intergenic | 45.0% | |
| ACGATACCGACGTAACAACA+TGG | + | chr1.1:1819988-1820007 | MS.gene24253:CDS | 45.0% | |
| ACTAGAAGTCCAACGCCATA+AGG | - | chr1.1:1822897-1822916 | None:intergenic | 45.0% | |
| AGGGGTAGACCTCATAGTAA+TGG | + | chr1.1:1821929-1821948 | MS.gene24253:intron | 45.0% | |
| AGTGTCTCTGTTAGTGACTG+TGG | + | chr1.1:1821223-1821242 | MS.gene24253:intron | 45.0% | |
| CTCTATTACAACTGCCCAAG+CGG | + | chr1.1:1822945-1822964 | MS.gene24253:CDS | 45.0% | |
| CTGGAACGTCTTCTCTTTCA+AGG | + | chr1.1:1822060-1822079 | MS.gene24253:intron | 45.0% | |
| CTTAACTGAGTGGCTCACTT+TGG | + | chr1.1:1820546-1820565 | MS.gene24253:intron | 45.0% | |
| GCATAGAGAAATCCTGAAGG+GGG | + | chr1.1:1822248-1822267 | MS.gene24253:intron | 45.0% | |
| GGGGTAGACCTCATAGTAAT+GGG | + | chr1.1:1821930-1821949 | MS.gene24253:intron | 45.0% | |
| GTACAGAAGTTGTCCAACCT+GGG | + | chr1.1:1821096-1821115 | MS.gene24253:intron | 45.0% | |
| ! | AGTATTTTGCCTACCCAGGT+TGG | - | chr1.1:1821112-1821131 | None:intergenic | 45.0% |
| ! | GCCTTTCCACATTTTGGATC+AGG | + | chr1.1:1823169-1823188 | MS.gene24253:CDS | 45.0% |
| ! | TGGTGAGCCTTTCCACATTT+TGG | + | chr1.1:1823163-1823182 | MS.gene24253:CDS | 45.0% |
| !! | CAAAAGTATTAGCCCCCTTC+AGG | - | chr1.1:1822263-1822282 | None:intergenic | 45.0% |
| !! | CCTTTTGGTCTTTTTTGCGG+GGG | + | chr1.1:1821071-1821090 | MS.gene24253:intron | 45.0% |
| !! | TAGTGGTCTATCGACTCGAT+AGG | + | chr1.1:1822125-1822144 | MS.gene24253:intron | 45.0% |
| !!! | GAACCACGTGAGTTTTGGAT+CGG | - | chr1.1:1820088-1820107 | None:intergenic | 45.0% |
| AAAGTTGGACAGGGTGGGTA+TGG | + | chr1.1:1822717-1822736 | MS.gene24253:intron | 50.0% | |
| AAGTTGGACAGGGTGGGTAT+GGG | + | chr1.1:1822718-1822737 | MS.gene24253:intron | 50.0% | |
| ACAGACACTAAGGACCCGTT+TGG | - | chr1.1:1820823-1820842 | None:intergenic | 50.0% | |
| ACCAACTCCAACCACAGCAA+TGG | - | chr1.1:1823147-1823166 | None:intergenic | 50.0% | |
| ACCATTGCTGTGGTTGGAGT+TGG | + | chr1.1:1823143-1823162 | MS.gene24253:CDS | 50.0% | |
| AGAAGTTGTCCAACCTGGGT+AGG | + | chr1.1:1821100-1821119 | MS.gene24253:intron | 50.0% | |
| AGGTTTGCACTCAGCGATCA+TGG | + | chr1.1:1822865-1822884 | MS.gene24253:intron | 50.0% | |
| CACTAAGGACCCGTTTGGAT+TGG | - | chr1.1:1820818-1820837 | None:intergenic | 50.0% | |
| CCCCCGCAAAAAAGACCAAA+AGG | - | chr1.1:1821074-1821093 | None:intergenic | 50.0% | |
| CCTTGCAAGGTGAAAAGCTC+AGG | + | chr1.1:1823108-1823127 | MS.gene24253:CDS | 50.0% | |
| CGACGTAACAACATGGTCAC+CGG | + | chr1.1:1819995-1820014 | MS.gene24253:CDS | 50.0% | |
| CGCTTGGGCAGTTGTAATAG+AGG | - | chr1.1:1822947-1822966 | None:intergenic | 50.0% | |
| CGGTGACCATGTTGTTACGT+CGG | - | chr1.1:1819997-1820016 | None:intergenic | 50.0% | |
| CTGAACGACGAGTCTACCAA+CGG | - | chr1.1:1820285-1820304 | None:intergenic | 50.0% | |
| CTTCTTGACAAACACGACGG+AGG | - | chr1.1:1821495-1821514 | None:intergenic | 50.0% | |
| GCCATGGAAGCAGTTAAGCA+AGG | + | chr1.1:1820044-1820063 | MS.gene24253:CDS | 50.0% | |
| GCTTCTGGTGCAGATCAAAG+TGG | + | chr1.1:1823296-1823315 | MS.gene24253:CDS | 50.0% | |
| GGTACAGAAGTTGTCCAACC+TGG | + | chr1.1:1821095-1821114 | MS.gene24253:intron | 50.0% | |
| GTATGCACCATTGCTGTGGT+TGG | + | chr1.1:1823137-1823156 | MS.gene24253:CDS | 50.0% | |
| GTCTCTGTTAGTGACTGTGG+TGG | + | chr1.1:1821226-1821245 | MS.gene24253:intron | 50.0% | |
| TATGAATCTCCGCTTCCCGT+TGG | + | chr1.1:1820266-1820285 | MS.gene24253:CDS | 50.0% | |
| TCTCCATTGGAGAACCACCT+TGG | - | chr1.1:1823337-1823356 | None:intergenic | 50.0% | |
| TCTCCGATCCAAAACTCACG+TGG | + | chr1.1:1820082-1820101 | MS.gene24253:CDS | 50.0% | |
| TGAACGACGAGTCTACCAAC+GGG | - | chr1.1:1820284-1820303 | None:intergenic | 50.0% | |
| TGACCAAGGTGGTTCTCCAA+TGG | + | chr1.1:1823331-1823350 | MS.gene24253:CDS | 50.0% | |
| TTTGATCAGATCTTCCCGGG+AGG | - | chr1.1:1823063-1823082 | None:intergenic | 50.0% | |
| ! | CCTGAGCTTTTCACCTTGCA+AGG | - | chr1.1:1823111-1823130 | None:intergenic | 50.0% |
| !! | AGATCAAAGTGGTGCTGGTG+GGG | + | chr1.1:1823307-1823326 | MS.gene24253:CDS | 50.0% |
| !! | CAGATCAAAGTGGTGCTGGT+GGG | + | chr1.1:1823306-1823325 | MS.gene24253:CDS | 50.0% |
| !! | CGATCATGGAAGCGTCCTTA+TGG | + | chr1.1:1822879-1822898 | MS.gene24253:CDS | 50.0% |
| !!! | GGTTTTGAGGAGGGAAACAG+TGG | + | chr1.1:1822081-1822100 | MS.gene24253:intron | 50.0% |
| !!! | TTTGGTCTTTTTTGCGGGGG+AGG | + | chr1.1:1821074-1821093 | MS.gene24253:intron | 50.0% |
| ACAACTTCACAGCCTCCTCC+CGG | + | chr1.1:1823045-1823064 | MS.gene24253:CDS | 55.0% | |
| ACGAGTCTACCAACGGGAAG+CGG | - | chr1.1:1820278-1820297 | None:intergenic | 55.0% | |
| ACGGGAAAGAACACGGCCAT+CGG | - | chr1.1:1820210-1820229 | None:intergenic | 55.0% | |
| AGTTGGACAGGGTGGGTATG+GGG | + | chr1.1:1822719-1822738 | MS.gene24253:intron | 55.0% | |
| CGTAACAACATGGTCACCGG+CGG | + | chr1.1:1819998-1820017 | MS.gene24253:CDS | 55.0% | |
| CTCCGTATGCACCATTGCTG+TGG | + | chr1.1:1823133-1823152 | MS.gene24253:CDS | 55.0% | |
| CTTCCAGGTGGAATACGCCA+TGG | + | chr1.1:1820028-1820047 | MS.gene24253:CDS | 55.0% | |
| CTTCCATGGCGTATTCCACC+TGG | - | chr1.1:1820034-1820053 | None:intergenic | 55.0% | |
| GAAGTAGGGAGACTGGTGTG+CGG | + | chr1.1:1821669-1821688 | MS.gene24253:intron | 55.0% | |
| GCAACTAGGGAGTCCTTGCA+AGG | + | chr1.1:1823095-1823114 | MS.gene24253:CDS | 55.0% | |
| GGTGCAGATCAAAGTGGTGC+TGG | + | chr1.1:1823302-1823321 | MS.gene24253:CDS | 55.0% | |
| GTAACAACATGGTCACCGGC+GGG | + | chr1.1:1819999-1820018 | MS.gene24253:CDS | 55.0% | |
| TCGCCGATAAGGCTCAGGTT+AGG | + | chr1.1:1820306-1820325 | MS.gene24253:intron | 55.0% | |
| TGCACCAGAAGCCTGATCTG+TGG | - | chr1.1:1823288-1823307 | None:intergenic | 55.0% | |
| ! | CGCGAGAACCACGTGAGTTT+TGG | - | chr1.1:1820093-1820112 | None:intergenic | 55.0% |
| ! | GCAGATCAAAGTGGTGCTGG+TGG | + | chr1.1:1823305-1823324 | MS.gene24253:CDS | 55.0% |
| ! | GGCGTTGGACTTCTAGTAGC+TGG | + | chr1.1:1822900-1822919 | MS.gene24253:CDS | 55.0% |
| !! | TGGAAGCGTCCTTATGGCGT+TGG | + | chr1.1:1822885-1822904 | MS.gene24253:CDS | 55.0% |
| ACCTGGAAGAGTCTTCCCGC+CGG | - | chr1.1:1820017-1820036 | None:intergenic | 60.0% | |
| AGCTGCACCTGCTGAACCTG+AGG | + | chr1.1:1823241-1823260 | MS.gene24253:CDS | 60.0% | |
| CAACTTCACAGCCTCCTCCC+GGG | + | chr1.1:1823046-1823065 | MS.gene24253:CDS | 60.0% | |
| CATATCGGCGTTGCCATCGC+CGG | + | chr1.1:1820176-1820195 | MS.gene24253:CDS | 60.0% | |
| CGTCGTTCAGCTCGCCGATA+AGG | + | chr1.1:1820295-1820314 | MS.gene24253:CDS | 60.0% | |
| GATCAGATCTTCCCGGGAGG+AGG | - | chr1.1:1823060-1823079 | None:intergenic | 60.0% | |
| GCAGGATGCTGCCACAGATC+AGG | + | chr1.1:1823274-1823293 | MS.gene24253:CDS | 60.0% | |
| GCTGCCACAGATCAGGCTTC+TGG | + | chr1.1:1823281-1823300 | MS.gene24253:CDS | 60.0% | |
| GGAAAGAACACGGCCATCGG+CGG | - | chr1.1:1820207-1820226 | None:intergenic | 60.0% | |
| GTTGGACAGGGTGGGTATGG+GGG | + | chr1.1:1822720-1822739 | MS.gene24253:intron | 60.0% | |
| TCAGCTCGCCGATAAGGCTC+AGG | + | chr1.1:1820301-1820320 | MS.gene24253:CDS | 60.0% | |
| TTGGACAGGGTGGGTATGGG+GGG | + | chr1.1:1822721-1822740 | MS.gene24253:intron | 60.0% | |
| ACCGGCGGGAAGACTCTTCC+AGG | + | chr1.1:1820013-1820032 | MS.gene24253:CDS | 65.0% | |
| ACCTGAGGCTGCAGCTGAGC+AGG | + | chr1.1:1823256-1823275 | MS.gene24253:CDS | 65.0% | |
| GCTGCAGCCTCAGGTTCAGC+AGG | - | chr1.1:1823251-1823270 | None:intergenic | 65.0% | |
| GGCGGGAAGACTCTTCCAGG+TGG | + | chr1.1:1820016-1820035 | MS.gene24253:CDS | 65.0% | |
| TCCTGCTCAGCTGCAGCCTC+AGG | - | chr1.1:1823260-1823279 | None:intergenic | 65.0% | |
| TGGACAGGGTGGGTATGGGG+GGG | + | chr1.1:1822722-1822741 | MS.gene24253:intron | 65.0% | |
| ACGGCCATCGGCGGTGAGAC+CGG | - | chr1.1:1820198-1820217 | None:intergenic | 70.0% | |
| ATCGCCGGTCTCACCGCCGA+TGG | + | chr1.1:1820191-1820210 | MS.gene24253:CDS | 70.0% | |
| ATCGGCGGTGAGACCGGCGA+TGG | - | chr1.1:1820192-1820211 | None:intergenic | 70.0% | |
| GCTGGTGGGGCTGACCAAGG+TGG | + | chr1.1:1823320-1823339 | MS.gene24253:CDS | 70.0% | |
| !! | GGTGCTGGTGGGGCTGACCA+AGG | + | chr1.1:1823317-1823336 | MS.gene24253:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 1819972 | 1823361 | 1819972 | ID=MS.gene24253 |
| chr1.1 | mRNA | 1819972 | 1823361 | 1819972 | ID=MS.gene24253.t1;Parent=MS.gene24253 |
| chr1.1 | exon | 1819972 | 1820322 | 1819972 | ID=MS.gene24253.t1.exon1;Parent=MS.gene24253.t1 |
| chr1.1 | CDS | 1819972 | 1820322 | 1819972 | ID=cds.MS.gene24253.t1;Parent=MS.gene24253.t1 |
| chr1.1 | exon | 1822867 | 1823361 | 1822867 | ID=MS.gene24253.t1.exon2;Parent=MS.gene24253.t1 |
| chr1.1 | CDS | 1822867 | 1823361 | 1822867 | ID=cds.MS.gene24253.t1;Parent=MS.gene24253.t1 |
| Gene Sequence |
| Protein sequence |
