Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036432.t1 | RHN80631.1 | 95.1 | 964 | 45 | 2 | 1 | 964 | 33 | 994 | 0.00E+00 | 1654.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036432.t1 | Q9NW13 | 32.5 | 954 | 434 | 17 | 23 | 964 | 4 | 759 | 1.1e-53 | 213.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036432.t1 | G7I6T9 | 95.1 | 964 | 45 | 2 | 1 | 964 | 1 | 962 | 0.0e+00 | 1654.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036432.t1 | MTR_1g080390 | 98.029 | 964 | 17 | 2 | 1 | 964 | 1 | 962 | 0.0 | 1929 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036432.t1 | AT2G21440 | 47.410 | 1023 | 416 | 20 | 24 | 964 | 21 | 1003 | 0.0 | 804 |
| MS.gene036432.t1 | AT1G54080 | 27.103 | 214 | 127 | 5 | 199 | 400 | 64 | 260 | 5.92e-11 | 66.2 |
Find 204 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTCCTTTGGTTCTTT+TGG | 0.108090 | 1.4:+65396533 | None:intergenic |
| TCTGTTTCCTTGGAAGTTTC+AGG | 0.151548 | 1.4:+65391888 | None:intergenic |
| TGCTTCTGGGATGGGTATTT+TGG | 0.157301 | 1.4:-65391584 | MS.gene036432:CDS |
| CGTTACGAAGTTTCAATTTC+TGG | 0.157364 | 1.4:+65390374 | None:intergenic |
| TTAACAGTTTCCTTGGATTT+TGG | 0.171316 | 1.4:+65391966 | None:intergenic |
| ACTGAATCTTTGTTCTTCTT+TGG | 0.190926 | 1.4:+65389887 | None:intergenic |
| GGGGTCCCCTTTCTGTCTTT+TGG | 0.224958 | 1.4:+65390141 | None:intergenic |
| TCAACTGCCAATACTGCTTC+TGG | 0.228699 | 1.4:-65391598 | MS.gene036432:CDS |
| AAGAAAGAAGACGCAGTATT+TGG | 0.233382 | 1.4:-65389965 | MS.gene036432:CDS |
| GTAATTTAGCACCATGATTC+TGG | 0.234712 | 1.4:+65390035 | None:intergenic |
| GGTAAGGGGTAGACCATTAA+AGG | 0.238442 | 1.4:-65391563 | MS.gene036432:CDS |
| GTTGCTAGAACTGTTATATT+TGG | 0.244405 | 1.4:-65396109 | MS.gene036432:CDS |
| AGAGCCTTTAAAACCTTTAA+TGG | 0.253378 | 1.4:+65391550 | None:intergenic |
| CACTTTGGTATTTGTACTCT+TGG | 0.267190 | 1.4:+65390120 | None:intergenic |
| GATAAAGACAGCGGATTATC+TGG | 0.273260 | 1.4:-65396578 | MS.gene036432:CDS |
| AGGCCAAAGAAAATGAAATA+AGG | 0.273524 | 1.4:-65394488 | MS.gene036432:CDS |
| ACTTTGGTATTTGTACTCTT+GGG | 0.305244 | 1.4:+65390121 | None:intergenic |
| AAACTCAATGGATCGAAGTT+TGG | 0.305477 | 1.4:-65394147 | MS.gene036432:CDS |
| TTTCATCTGCGGGGACTGTA+TGG | 0.307723 | 1.4:-65394458 | MS.gene036432:CDS |
| TCCACAATTGGCCGATGTTC+AGG | 0.314138 | 1.4:+65390415 | None:intergenic |
| TTCCTTTCCGAAGAAGCTTT+TGG | 0.331812 | 1.4:+65390079 | None:intergenic |
| TAACCAACCTGCCGAATTAC+AGG | 0.333219 | 1.4:+65390909 | None:intergenic |
| TCTACACAACATCGTGGTTT+TGG | 0.333522 | 1.4:-65397726 | MS.gene036432:CDS |
| ATAGTTCCATTGACAGTAAT+AGG | 0.336958 | 1.4:-65390000 | MS.gene036432:CDS |
| CACCATGATTCTGGCCATCT+TGG | 0.340703 | 1.4:+65390044 | None:intergenic |
| CAATCGCAACCTTCTTCCTT+TGG | 0.342154 | 1.4:+65396524 | None:intergenic |
| TGTCAGAAACCTTCCTTTCA+AGG | 0.342388 | 1.4:-65394593 | MS.gene036432:intron |
| TTTCATAACAAAATTATGAT+TGG | 0.345149 | 1.4:+65389741 | None:intergenic |
| CAAATCAACTTCTGTTTCCT+TGG | 0.354494 | 1.4:+65391878 | None:intergenic |
| GTCGTCTCATAGCTGTTGAT+TGG | 0.358840 | 1.4:-65394122 | MS.gene036432:CDS |
| AACTCAATGGATCGAAGTTT+GGG | 0.358983 | 1.4:-65394146 | MS.gene036432:CDS |
| GTTATTTACAGATTCGTCTT+TGG | 0.369847 | 1.4:+65392019 | None:intergenic |
| AAGCAGGGGAAAAGGTTTCT+AGG | 0.374787 | 1.4:-65389916 | MS.gene036432:CDS |
| TGCACCCTTAACAGTTTCCT+TGG | 0.378021 | 1.4:+65391959 | None:intergenic |
| CTGTTTCATGGTTACACAAA+AGG | 0.379270 | 1.4:-65397828 | MS.gene036432:CDS |
| GACAGTAATAGGAAAATATC+AGG | 0.382523 | 1.4:-65389989 | MS.gene036432:CDS |
| CTATTAAGCATCCCCTTTCA+AGG | 0.383007 | 1.4:-65396018 | MS.gene036432:CDS |
| ACCATGAAACAGCGTCTAAC+AGG | 0.384092 | 1.4:+65397839 | None:intergenic |
| GCTGAAACCCCTTCGGCAGC+TGG | 0.384100 | 1.4:+65391329 | None:intergenic |
| CTGAGAGTTAGTGAAGGAAT+AGG | 0.388327 | 1.4:+65397982 | None:intergenic |
| AGAACCCTTGTGTGAGAACT+TGG | 0.390972 | 1.4:+65389814 | None:intergenic |
| CTCTGAAGCAGGAGCATCAT+TGG | 0.391724 | 1.4:+65394068 | None:intergenic |
| AAAATCCAAGGAAACTGTTA+AGG | 0.392787 | 1.4:-65391964 | MS.gene036432:CDS |
| AAAGGCTCTGGACAAGAAAT+CGG | 0.400061 | 1.4:-65391536 | MS.gene036432:CDS |
| CCGTGTTCACTATTTGAATC+TGG | 0.400337 | 1.4:+65390205 | None:intergenic |
| GCTAGAACTGTTATATTTGG+TGG | 0.404207 | 1.4:-65396106 | MS.gene036432:CDS |
| ACCTGTTAGACGCTGTTTCA+TGG | 0.405122 | 1.4:-65397840 | MS.gene036432:CDS |
| CACCGCCAAGCCAGAGAAAT+CGG | 0.405483 | 1.4:-65396052 | MS.gene036432:CDS |
| ATCTAATTCAAAGGGAAGAT+TGG | 0.406524 | 1.4:+65391836 | None:intergenic |
| GAACAAACTTTCAGTGAAGT+TGG | 0.409004 | 1.4:-65397863 | MS.gene036432:CDS |
| AAGCTTCCATTTCTGAGTCT+TGG | 0.414414 | 1.4:+65394618 | None:intergenic |
| AGACCACCGCAATCTTTACT+TGG | 0.416144 | 1.4:-65391473 | MS.gene036432:CDS |
| TCCTGTGTGCAGTCTTTCAA+AGG | 0.416759 | 1.4:-65394315 | MS.gene036432:intron |
| AAACCGTTGCTTCACTTCTT+CGG | 0.420518 | 1.4:+65391812 | None:intergenic |
| TTAGAAACAAAGAGTGTTAA+CGG | 0.425518 | 1.4:+65398010 | None:intergenic |
| TGCGTAAACTCCCGCATTGT+CGG | 0.425962 | 1.4:+65390288 | None:intergenic |
| GGCCAAAGAAAATGAAATAA+GGG | 0.433746 | 1.4:-65394487 | MS.gene036432:CDS |
| AGAAAGTCCAAAAGCTTCTT+CGG | 0.435552 | 1.4:-65390086 | MS.gene036432:CDS |
| CCAAGCAAATACCTGTAATT+CGG | 0.436673 | 1.4:-65390920 | MS.gene036432:CDS |
| TTGGTCACTTGGTGGAGAAC+AGG | 0.437156 | 1.4:+65391759 | None:intergenic |
| TGAACCATTCTTCAGCTCAA+TGG | 0.445046 | 1.4:+65396854 | None:intergenic |
| CTGAAGATCATTCCTTGAAA+GGG | 0.446240 | 1.4:+65396006 | None:intergenic |
| ACACACAGTGCCGATTTCTC+TGG | 0.447857 | 1.4:+65396042 | None:intergenic |
| TGCCGATTTCTCTGGCTTGG+CGG | 0.449281 | 1.4:+65396050 | None:intergenic |
| CAACTGCCAATACTGCTTCT+GGG | 0.451408 | 1.4:-65391597 | MS.gene036432:CDS |
| AGAGTTCTTAACAATAATCC+TGG | 0.454597 | 1.4:-65390679 | MS.gene036432:intron |
| AATCTAAACAGCTTAGGAAA+TGG | 0.456031 | 1.4:-65389766 | MS.gene036432:CDS |
| TGAGAGTTAGTGAAGGAATA+GGG | 0.456317 | 1.4:+65397983 | None:intergenic |
| CCTGTGTGCAGTCTTTCAAA+GGG | 0.458416 | 1.4:-65394314 | MS.gene036432:intron |
| GGCTTGGCGGTGAACATCTT+CGG | 0.460580 | 1.4:+65396063 | None:intergenic |
| CTAGGACATACTTGGTCACT+TGG | 0.461965 | 1.4:+65391748 | None:intergenic |
| GCGTAAACTCCCGCATTGTC+GGG | 0.462564 | 1.4:+65390289 | None:intergenic |
| GCCAATACTGCTTCTGGGAT+GGG | 0.465705 | 1.4:-65391592 | MS.gene036432:CDS |
| TCAAGAGCAAACTCCACAAT+TGG | 0.466178 | 1.4:+65390403 | None:intergenic |
| TAACGGCGGACATTGTTTAA+CGG | 0.467270 | 1.4:+65398027 | None:intergenic |
| AGCATCAACCAACCTTGATC+CGG | 0.467750 | 1.4:+65396759 | None:intergenic |
| ATCGGCTCATGACAAGGAAC+AGG | 0.468605 | 1.4:-65391518 | MS.gene036432:CDS |
| ACCCATCCCAGAAGCAGTAT+TGG | 0.471074 | 1.4:+65391591 | None:intergenic |
| TTTGGGCACGCCAACTTGGT+GGG | 0.473129 | 1.4:-65395334 | MS.gene036432:CDS |
| ACTGTTTGGGCACGCCAACT+TGG | 0.473827 | 1.4:-65395338 | MS.gene036432:CDS |
| CATTCTTCAGCTCAATGGCT+TGG | 0.474934 | 1.4:+65396859 | None:intergenic |
| CCAAGAACAAGCAGGGGAAA+AGG | 0.475052 | 1.4:-65389924 | MS.gene036432:CDS |
| TGAGCTGAAGAATGGTTCAT+TGG | 0.476836 | 1.4:-65396850 | MS.gene036432:CDS |
| TAGGAGGGACTTATTCTTGA+CGG | 0.477564 | 1.4:-65391356 | MS.gene036432:CDS |
| CAGGCGATTCGAAAACTCAA+TGG | 0.479592 | 1.4:-65394159 | MS.gene036432:CDS |
| TGCAGGCGTCCACGAGGGAC+TGG | 0.480915 | 1.4:-65391664 | MS.gene036432:intron |
| GGCAAATCCAAAAGACAGAA+AGG | 0.484725 | 1.4:-65390148 | MS.gene036432:CDS |
| TACAGATTCGTCTTTGGCAG+AGG | 0.486047 | 1.4:+65392025 | None:intergenic |
| TGCCAATACTGCTTCTGGGA+TGG | 0.486395 | 1.4:-65391593 | MS.gene036432:CDS |
| CTTTGGTATTTGTACTCTTG+GGG | 0.486960 | 1.4:+65390122 | None:intergenic |
| GTTTGGGCACGCCAACTTGG+TGG | 0.487001 | 1.4:-65395335 | MS.gene036432:CDS |
| CGAAGATCGAAACCGGATCA+AGG | 0.488053 | 1.4:-65396771 | MS.gene036432:intron |
| CAGTGCCGATTTCTCTGGCT+TGG | 0.490360 | 1.4:+65396047 | None:intergenic |
| AATGATAAACCCGACAATGC+GGG | 0.495453 | 1.4:-65390298 | MS.gene036432:CDS |
| CTATTCCTTCACTAACTCTC+AGG | 0.495586 | 1.4:-65397981 | MS.gene036432:intron |
| GATTTCTTTAGGACAACAAA+AGG | 0.498067 | 1.4:-65392225 | MS.gene036432:intron |
| ATGGTTCATTGGTTGGTGAC+CGG | 0.499594 | 1.4:-65396839 | MS.gene036432:CDS |
| TCGTCTCATAGCTGTTGATT+GGG | 0.499678 | 1.4:-65394121 | MS.gene036432:CDS |
| TGTTTCATGGTTACACAAAA+GGG | 0.499866 | 1.4:-65397827 | MS.gene036432:intron |
| TCATTGACCACAGAAACCTT+TGG | 0.500631 | 1.4:-65390439 | MS.gene036432:intron |
| TTCTCACACAAGGGTTCTCA+AGG | 0.501028 | 1.4:-65389809 | MS.gene036432:CDS |
| AGGGAGCCAAGACTCAGAAA+TGG | 0.503890 | 1.4:-65394624 | MS.gene036432:CDS |
| AGAAATATCTGAAACCTTGT+CGG | 0.504739 | 1.4:+65391914 | None:intergenic |
| GCAAATCCAAAAGACAGAAA+GGG | 0.507205 | 1.4:-65390147 | MS.gene036432:CDS |
| TGAAAATCGAAGATCGAAAC+CGG | 0.507609 | 1.4:-65396778 | MS.gene036432:CDS |
| GGGAAAAGGTTTCTAGGAAA+AGG | 0.509364 | 1.4:-65389910 | MS.gene036432:CDS |
| CCGAATTACAGGTATTTGCT+TGG | 0.511846 | 1.4:+65390920 | None:intergenic |
| TCTTCGGTATCTAATTCAAA+GGG | 0.513395 | 1.4:+65391828 | None:intergenic |
| TTCTTTCGATGAGATCACTT+TGG | 0.514477 | 1.4:+65390105 | None:intergenic |
| GCTGAAGATCATTCCTTGAA+AGG | 0.515929 | 1.4:+65396005 | None:intergenic |
| CACGGTGGTAGAGTGCCAAA+TGG | 0.516262 | 1.4:-65390187 | MS.gene036432:CDS |
| TCAACAGATCGAACCTTGAA+AGG | 0.517773 | 1.4:+65394580 | None:intergenic |
| TTCATCTGCGGGGACTGTAT+GGG | 0.521165 | 1.4:-65394457 | MS.gene036432:CDS |
| AAGACGCAGTATTTGGAAAG+AGG | 0.521867 | 1.4:-65389958 | MS.gene036432:CDS |
| ATCAGTGGCTGAAACCCCTT+CGG | 0.522666 | 1.4:+65391322 | None:intergenic |
| TTCTTCGGTATCTAATTCAA+AGG | 0.523243 | 1.4:+65391827 | None:intergenic |
| GACGGAACTCCAGCTGCCGA+AGG | 0.523716 | 1.4:-65391338 | MS.gene036432:CDS |
| CAATGATGCTCCTGCTTCAG+AGG | 0.523848 | 1.4:-65394067 | MS.gene036432:CDS |
| CAGATCGAACCTTGAAAGGA+AGG | 0.524767 | 1.4:+65394584 | None:intergenic |
| GAAATATTTATAGTTTGGAA+AGG | 0.525585 | 1.4:-65391076 | MS.gene036432:intron |
| CAAGCCATTGAGCTGAAGAA+TGG | 0.526625 | 1.4:-65396858 | MS.gene036432:CDS |
| GAACAAAGATTCAGTAGGGA+AGG | 0.527716 | 1.4:-65389879 | MS.gene036432:CDS |
| AACCAAGATGGCCAGAATCA+TGG | 0.528146 | 1.4:-65390046 | MS.gene036432:CDS |
| TCCTGAACATCGGCCAATTG+TGG | 0.528514 | 1.4:-65390416 | MS.gene036432:CDS |
| AAATCCAAGGAAACTGTTAA+GGG | 0.531440 | 1.4:-65391963 | MS.gene036432:CDS |
| CCAAAAGAACCAAAGGAAGA+AGG | 0.533227 | 1.4:-65396533 | MS.gene036432:intron |
| AAGAAGAACAAAGATTCAGT+AGG | 0.534680 | 1.4:-65389884 | MS.gene036432:CDS |
| GATGCAATAGAGGGCAATGA+AGG | 0.535517 | 1.4:-65396626 | MS.gene036432:intron |
| AAATTACCTTCCTCTGAAGC+AGG | 0.535871 | 1.4:+65394057 | None:intergenic |
| TGCATTATCAGCTGCTTCCG+CGG | 0.535875 | 1.4:+65391624 | None:intergenic |
| ATGCATAACCAAGAACAAGC+AGG | 0.537887 | 1.4:-65389932 | MS.gene036432:CDS |
| TTCCCAGGTCTGCTGCAAGA+AGG | 0.538150 | 1.4:-65395455 | MS.gene036432:intron |
| GCAAATACCTGTAATTCGGC+AGG | 0.538494 | 1.4:-65390916 | MS.gene036432:intron |
| TTCTAAGCCTGAAACTTCCA+AGG | 0.542108 | 1.4:-65391895 | MS.gene036432:CDS |
| GATGCTCCTGCTTCAGAGGA+AGG | 0.546927 | 1.4:-65394063 | MS.gene036432:intron |
| ACTGACAAAGAATCTGATCA+AGG | 0.547224 | 1.4:-65392155 | MS.gene036432:CDS |
| TGGCCGATGTTCAGGACCAA+AGG | 0.547311 | 1.4:+65390423 | None:intergenic |
| GGACATACTTGGTCACTTGG+TGG | 0.548184 | 1.4:+65391751 | None:intergenic |
| AAAGAACAAGCCAAAATCCA+AGG | 0.552898 | 1.4:-65391976 | MS.gene036432:CDS |
| ACGGAACTCCAGCTGCCGAA+GGG | 0.553197 | 1.4:-65391337 | MS.gene036432:CDS |
| CAATGTTGCAACAGAAGCAC+GGG | 0.556088 | 1.4:+65395385 | None:intergenic |
| TTGGGCACGCCAACTTGGTG+GGG | 0.556141 | 1.4:-65395333 | MS.gene036432:CDS |
| TGGTCTCGTGAATTCTGCTA+TGG | 0.558745 | 1.4:-65396086 | MS.gene036432:CDS |
| GGCACGCCAACTTGGTGGGG+AGG | 0.559247 | 1.4:-65395330 | MS.gene036432:intron |
| CATGGTGCTAAATTACATGA+AGG | 0.559370 | 1.4:-65390028 | MS.gene036432:CDS |
| TTCAGTTCCAAAAGAACCAA+AGG | 0.560178 | 1.4:-65396540 | MS.gene036432:CDS |
| CTGAAGAATGGTTCATTGGT+TGG | 0.562960 | 1.4:-65396846 | MS.gene036432:CDS |
| ATTCAAGAAAAGCGACTCCA+CGG | 0.563574 | 1.4:+65390734 | None:intergenic |
| CAAGAAATCGGCTCATGACA+AGG | 0.564214 | 1.4:-65391524 | MS.gene036432:CDS |
| ACTTTACCTCCCCACCAAGT+TGG | 0.564510 | 1.4:+65395324 | None:intergenic |
| TTGTAATGACACAGCAGATG+AGG | 0.565429 | 1.4:-65396351 | MS.gene036432:CDS |
| GTCCAAAAGCTTCTTCGGAA+AGG | 0.566021 | 1.4:-65390081 | MS.gene036432:CDS |
| AGAAGAACAAAGATTCAGTA+GGG | 0.570029 | 1.4:-65389883 | MS.gene036432:CDS |
| CAAATCCAAAAGACAGAAAG+GGG | 0.571325 | 1.4:-65390146 | MS.gene036432:CDS |
| GAAAGATGGCAGGAAAGGAA+AGG | 0.571880 | 1.4:-65390779 | MS.gene036432:CDS |
| TGCATAACCAAGAACAAGCA+GGG | 0.575155 | 1.4:-65389931 | MS.gene036432:CDS |
| TGTAATGACACAGCAGATGA+GGG | 0.575965 | 1.4:-65396350 | MS.gene036432:CDS |
| TGACAAACCAGCAAAAGACT+TGG | 0.576336 | 1.4:-65390230 | MS.gene036432:CDS |
| GCAATGTTGCAACAGAAGCA+CGG | 0.579403 | 1.4:+65395384 | None:intergenic |
| CCGCAATCTTTACTTGGCGA+AGG | 0.588434 | 1.4:-65391467 | MS.gene036432:intron |
| CGGAACTCCAGCTGCCGAAG+GGG | 0.589924 | 1.4:-65391336 | MS.gene036432:CDS |
| AAAGCTACAGTATCAGCAGC+GGG | 0.590881 | 1.4:-65390350 | MS.gene036432:CDS |
| TTCAAGAAAAGCGACTCCAC+GGG | 0.595349 | 1.4:+65390735 | None:intergenic |
| TTGTCAAAATCATCGTCAGA+AGG | 0.599134 | 1.4:+65392092 | None:intergenic |
| CAAAAGGTGACAGATGAAGA+TGG | 0.601633 | 1.4:-65392209 | MS.gene036432:CDS |
| TACCCTGTGTCGGACTTCTG+TGG | 0.606080 | 1.4:+65394423 | None:intergenic |
| TAATGACACAGCAGATGAGG+GGG | 0.608560 | 1.4:-65396348 | MS.gene036432:CDS |
| ATTCCACAGAAGTCCGACAC+AGG | 0.608649 | 1.4:-65394426 | MS.gene036432:CDS |
| AGGAATGATCTTCAGCAGCA+TGG | 0.610357 | 1.4:-65395998 | MS.gene036432:intron |
| AAGGAATATATACCCTGTGT+CGG | 0.616888 | 1.4:+65394413 | None:intergenic |
| AAGGGTTCTCAAGGAAATGA+CGG | 0.619296 | 1.4:-65389800 | MS.gene036432:CDS |
| CAGCAGCGGGCTCCTCACAA+TGG | 0.623421 | 1.4:-65390337 | MS.gene036432:CDS |
| TAGATCCAAGTTCTCACACA+AGG | 0.623451 | 1.4:-65389819 | MS.gene036432:CDS |
| TTTCTGCTGTTGCCATTGTG+AGG | 0.623452 | 1.4:+65390325 | None:intergenic |
| TGAAGATCATTCCTTGAAAG+GGG | 0.624383 | 1.4:+65396007 | None:intergenic |
| ATCTGCGGGGACTGTATGGG+AGG | 0.628989 | 1.4:-65394454 | MS.gene036432:CDS |
| AAATGATAAACCCGACAATG+CGG | 0.629902 | 1.4:-65390299 | MS.gene036432:CDS |
| CCAAATGGAAAATCTCCTCA+AGG | 0.629918 | 1.4:-65390172 | MS.gene036432:CDS |
| CCAGATTCAAATAGTGAACA+CGG | 0.633933 | 1.4:-65390205 | MS.gene036432:CDS |
| AAACCTTTGGTCCTGAACAT+CGG | 0.642171 | 1.4:-65390426 | MS.gene036432:CDS |
| GAGTACCTGAGAGTTAGTGA+AGG | 0.642979 | 1.4:+65397976 | None:intergenic |
| GTAATGACACAGCAGATGAG+GGG | 0.644262 | 1.4:-65396349 | MS.gene036432:CDS |
| CAAGAACAGCAGTATTCCCG+TGG | 0.650331 | 1.4:-65390751 | MS.gene036432:CDS |
| AGATGGTAGTACTACTACTG+AGG | 0.654593 | 1.4:-65392192 | MS.gene036432:CDS |
| ATACCGAAGAAGTGAAGCAA+CGG | 0.656518 | 1.4:-65391815 | MS.gene036432:CDS |
| AATGCGGGAGTTTACGCACA+TGG | 0.658005 | 1.4:-65390283 | MS.gene036432:CDS |
| TAGTGATATTGATAGTGTTG+TGG | 0.658825 | 1.4:-65392126 | MS.gene036432:CDS |
| CTCAATGCAGGCGTCCACGA+GGG | 0.661595 | 1.4:-65391669 | MS.gene036432:intron |
| TGATATTGATAGTGTTGTGG+AGG | 0.663472 | 1.4:-65392123 | MS.gene036432:CDS |
| TTCCACAGAAGTCCGACACA+GGG | 0.667711 | 1.4:-65394425 | MS.gene036432:intron |
| TTAAGAAAACCAGTCCCTCG+TGG | 0.669577 | 1.4:+65391655 | None:intergenic |
| ATGAAGGAAAATAGCGACGA+CGG | 0.674278 | 1.4:-65398052 | MS.gene036432:CDS |
| GCATAACCAAGAACAAGCAG+GGG | 0.676330 | 1.4:-65389930 | MS.gene036432:CDS |
| AACATCTAAAGAGTCCGACA+AGG | 0.679032 | 1.4:-65391928 | MS.gene036432:CDS |
| ACTCAATGCAGGCGTCCACG+AGG | 0.680693 | 1.4:-65391670 | MS.gene036432:intron |
| AAAAGCTACAGTATCAGCAG+CGG | 0.686433 | 1.4:-65390351 | MS.gene036432:CDS |
| AGATCCAAGTTCTCACACAA+GGG | 0.701976 | 1.4:-65389818 | MS.gene036432:CDS |
| TCGCCAAGTAAAGATTGCGG+TGG | 0.704028 | 1.4:+65391470 | None:intergenic |
| TCAGGGTCTACACAACATCG+TGG | 0.720317 | 1.4:-65397732 | MS.gene036432:intron |
| AATGGAAAATCTCCTCAAGG+AGG | 0.725686 | 1.4:-65390169 | MS.gene036432:CDS |
| AATGACACAGCAGATGAGGG+GGG | 0.726717 | 1.4:-65396347 | MS.gene036432:CDS |
| CCTTCGCCAAGTAAAGATTG+CGG | 0.731180 | 1.4:+65391467 | None:intergenic |
| GAAACAAAGAGTGTTAACGG+CGG | 0.786080 | 1.4:+65398013 | None:intergenic |
| GATTCAAATAGTGAACACGG+TGG | 0.855909 | 1.4:-65390202 | MS.gene036432:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 65389754 | 65398095 | 65389754 | ID=MS.gene036432 |
| chr1.4 | mRNA | 65389754 | 65398095 | 65389754 | ID=MS.gene036432.t1;Parent=MS.gene036432 |
| chr1.4 | exon | 65397982 | 65398095 | 65397982 | ID=MS.gene036432.t1.exon1;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65397982 | 65398095 | 65397982 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65397828 | 65397888 | 65397828 | ID=MS.gene036432.t1.exon2;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65397828 | 65397888 | 65397828 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65397714 | 65397750 | 65397714 | ID=MS.gene036432.t1.exon3;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65397714 | 65397750 | 65397714 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65396772 | 65396902 | 65396772 | ID=MS.gene036432.t1.exon4;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65396772 | 65396902 | 65396772 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65396534 | 65396638 | 65396534 | ID=MS.gene036432.t1.exon5;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65396534 | 65396638 | 65396534 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65396329 | 65396437 | 65396329 | ID=MS.gene036432.t1.exon6;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65396329 | 65396437 | 65396329 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65395999 | 65396132 | 65395999 | ID=MS.gene036432.t1.exon7;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65395999 | 65396132 | 65395999 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65395331 | 65395470 | 65395331 | ID=MS.gene036432.t1.exon8;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65395331 | 65395470 | 65395331 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65394594 | 65394644 | 65394594 | ID=MS.gene036432.t1.exon9;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65394594 | 65394644 | 65394594 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65394426 | 65394508 | 65394426 | ID=MS.gene036432.t1.exon10;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65394426 | 65394508 | 65394426 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65394271 | 65394325 | 65394271 | ID=MS.gene036432.t1.exon11;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65394271 | 65394325 | 65394271 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65394064 | 65394178 | 65394064 | ID=MS.gene036432.t1.exon12;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65394064 | 65394178 | 65394064 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65391759 | 65392236 | 65391759 | ID=MS.gene036432.t1.exon13;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65391759 | 65392236 | 65391759 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65391468 | 65391681 | 65391468 | ID=MS.gene036432.t1.exon14;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65391468 | 65391681 | 65391468 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65391305 | 65391375 | 65391305 | ID=MS.gene036432.t1.exon15;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65391305 | 65391375 | 65391305 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65390917 | 65391085 | 65390917 | ID=MS.gene036432.t1.exon16;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65390917 | 65391085 | 65390917 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65390680 | 65390812 | 65390680 | ID=MS.gene036432.t1.exon17;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65390680 | 65390812 | 65390680 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| chr1.4 | exon | 65389754 | 65390448 | 65389754 | ID=MS.gene036432.t1.exon18;Parent=MS.gene036432.t1 |
| chr1.4 | CDS | 65389754 | 65390448 | 65389754 | ID=cds.MS.gene036432.t1;Parent=MS.gene036432.t1 |
| Gene Sequence |
| Protein sequence |
