Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48807.t1 | XP_013455188.1 | 94.9 | 313 | 16 | 0 | 1 | 313 | 9 | 321 | 1.90E-166 | 595.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48807.t1 | Q9FLC0 | 62.6 | 297 | 107 | 3 | 19 | 313 | 30 | 324 | 4.1e-98 | 359.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48807.t1 | A0A072UIE4 | 94.9 | 313 | 16 | 0 | 1 | 313 | 9 | 321 | 1.3e-166 | 595.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene48807 | -0.805883 | 1.08E-49 | -1.69E-46 |
| MS.gene04926 | MS.gene48807 | 0.804192 | 2.43E-49 | -1.69E-46 |
| MS.gene04932 | MS.gene48807 | 0.805828 | 1.11E-49 | -1.69E-46 |
| MS.gene049549 | MS.gene48807 | 0.846139 | 2.62E-59 | -1.69E-46 |
| MS.gene049634 | MS.gene48807 | 0.808389 | 3.17E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene48807 | -0.802612 | 5.17E-49 | -1.69E-46 |
| MS.gene050095 | MS.gene48807 | 0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene050096 | MS.gene48807 | 0.814476 | 1.51E-51 | -1.69E-46 |
| MS.gene050380 | MS.gene48807 | 0.81947 | 1.14E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene48807 | 0.807435 | 5.06E-50 | -1.69E-46 |
| MS.gene050647 | MS.gene48807 | 0.830878 | 2.29E-55 | -1.69E-46 |
| MS.gene050720 | MS.gene48807 | 0.821988 | 3.01E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene48807 | -0.802477 | 5.51E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene48807 | 0.826987 | 2.01E-54 | -1.69E-46 |
| MS.gene05104 | MS.gene48807 | 0.830245 | 3.27E-55 | -1.69E-46 |
| MS.gene051131 | MS.gene48807 | 0.80014 | 1.66E-48 | -1.69E-46 |
| MS.gene051138 | MS.gene48807 | 0.808739 | 2.67E-50 | -1.69E-46 |
| MS.gene051158 | MS.gene48807 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene051385 | MS.gene48807 | 0.844674 | 6.53E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene48807 | -0.813118 | 3.01E-51 | -1.69E-46 |
| MS.gene051907 | MS.gene48807 | 0.801263 | 9.78E-49 | -1.69E-46 |
| MS.gene051996 | MS.gene48807 | 0.816995 | 4.15E-52 | -1.69E-46 |
| MS.gene052211 | MS.gene48807 | 0.822557 | 2.22E-53 | -1.69E-46 |
| MS.gene05240 | MS.gene48807 | 0.854221 | 1.42E-61 | -1.69E-46 |
| MS.gene052414 | MS.gene48807 | -0.803423 | 3.51E-49 | -1.69E-46 |
| MS.gene05244 | MS.gene48807 | 0.827958 | 1.17E-54 | -1.69E-46 |
| MS.gene052606 | MS.gene48807 | 0.8094 | 1.93E-50 | -1.69E-46 |
| MS.gene052702 | MS.gene48807 | 0.809288 | 2.04E-50 | -1.69E-46 |
| MS.gene053030 | MS.gene48807 | 0.813157 | 2.95E-51 | -1.69E-46 |
| MS.gene053031 | MS.gene48807 | 0.856401 | 3.30E-62 | -1.69E-46 |
| MS.gene053033 | MS.gene48807 | 0.831724 | 1.42E-55 | -1.69E-46 |
| MS.gene053403 | MS.gene48807 | 0.807249 | 5.54E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene48807 | 0.869793 | 2.37E-66 | -1.69E-46 |
| MS.gene054146 | MS.gene48807 | 0.821822 | 3.29E-53 | -1.69E-46 |
| MS.gene054147 | MS.gene48807 | 0.822794 | 1.96E-53 | -1.69E-46 |
| MS.gene054181 | MS.gene48807 | 0.820911 | 5.34E-53 | -1.69E-46 |
| MS.gene054277 | MS.gene48807 | 0.806579 | 7.68E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene48807 | 0.831413 | 1.69E-55 | -1.69E-46 |
| MS.gene054421 | MS.gene48807 | 0.801492 | 8.78E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene48807 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene48807 | 0.866267 | 3.23E-65 | -1.69E-46 |
| MS.gene054884 | MS.gene48807 | 0.806587 | 7.65E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene48807 | 0.814981 | 1.17E-51 | -1.69E-46 |
| MS.gene055202 | MS.gene48807 | 0.802386 | 5.75E-49 | -1.69E-46 |
| MS.gene055240 | MS.gene48807 | 0.828493 | 8.72E-55 | -1.69E-46 |
| MS.gene055601 | MS.gene48807 | 0.827809 | 1.27E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene48807 | -0.803372 | 3.60E-49 | -1.69E-46 |
| MS.gene055959 | MS.gene48807 | 0.807587 | 4.70E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene48807 | 0.837619 | 4.67E-57 | -1.69E-46 |
| MS.gene056590 | MS.gene48807 | 0.834133 | 3.57E-56 | -1.69E-46 |
| MS.gene056591 | MS.gene48807 | 0.834848 | 2.36E-56 | -1.69E-46 |
| MS.gene056856 | MS.gene48807 | 0.814493 | 1.50E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene48807 | 0.804595 | 2.00E-49 | -1.69E-46 |
| MS.gene056920 | MS.gene48807 | 0.826422 | 2.74E-54 | -1.69E-46 |
| MS.gene056922 | MS.gene48807 | 0.813283 | 2.77E-51 | -1.69E-46 |
| MS.gene057544 | MS.gene48807 | 0.824708 | 6.97E-54 | -1.69E-46 |
| MS.gene058093 | MS.gene48807 | 0.812338 | 4.46E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene48807 | 0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene058158 | MS.gene48807 | 0.811832 | 5.75E-51 | -1.69E-46 |
| MS.gene058177 | MS.gene48807 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene48807 | 0.828217 | 1.02E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene48807 | -0.801228 | 9.94E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene48807 | 0.818296 | 2.11E-52 | -1.69E-46 |
| MS.gene058840 | MS.gene48807 | 0.802314 | 5.95E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene48807 | -0.806666 | 7.36E-50 | -1.69E-46 |
| MS.gene059037 | MS.gene48807 | 0.820217 | 7.71E-53 | -1.69E-46 |
| MS.gene059038 | MS.gene48807 | 0.800698 | 1.28E-48 | -1.69E-46 |
| MS.gene059043 | MS.gene48807 | 0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene48807 | -0.800396 | 1.47E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene48807 | 0.833636 | 4.76E-56 | -1.69E-46 |
| MS.gene059892 | MS.gene48807 | 0.809849 | 1.54E-50 | -1.69E-46 |
| MS.gene059944 | MS.gene48807 | 0.823119 | 1.64E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene48807 | 0.817218 | 3.70E-52 | -1.69E-46 |
| MS.gene060087 | MS.gene48807 | 0.849062 | 4.12E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48807.t1 | MTR_4g029170 | 94.888 | 313 | 16 | 0 | 1 | 313 | 9 | 321 | 0.0 | 617 |
| MS.gene48807.t1 | MTR_4g029180 | 87.821 | 312 | 38 | 0 | 2 | 313 | 10 | 321 | 0.0 | 549 |
| MS.gene48807.t1 | MTR_5g074710 | 61.514 | 317 | 116 | 4 | 1 | 313 | 7 | 321 | 1.84e-137 | 392 |
| MS.gene48807.t1 | MTR_5g074740 | 61.587 | 315 | 115 | 4 | 3 | 313 | 9 | 321 | 2.51e-136 | 389 |
| MS.gene48807.t1 | MTR_5g074860 | 60.883 | 317 | 115 | 5 | 3 | 312 | 10 | 324 | 4.91e-136 | 389 |
| MS.gene48807.t1 | MTR_5g074760 | 60.317 | 315 | 119 | 4 | 3 | 313 | 9 | 321 | 7.61e-135 | 385 |
| MS.gene48807.t1 | MTR_5g074970 | 60.759 | 316 | 120 | 2 | 1 | 313 | 12 | 326 | 5.88e-132 | 378 |
| MS.gene48807.t1 | MTR_3g466200 | 59.873 | 314 | 122 | 3 | 3 | 313 | 8 | 320 | 5.33e-129 | 370 |
| MS.gene48807.t1 | MTR_3g467600 | 58.360 | 317 | 126 | 4 | 2 | 313 | 9 | 324 | 2.49e-125 | 361 |
| MS.gene48807.t1 | MTR_3g072190 | 58.095 | 315 | 127 | 3 | 2 | 313 | 6 | 318 | 6.55e-124 | 357 |
| MS.gene48807.t1 | MTR_5g083860 | 56.869 | 313 | 130 | 4 | 3 | 313 | 16 | 325 | 6.77e-123 | 355 |
| MS.gene48807.t1 | MTR_7g072510 | 58.644 | 295 | 120 | 2 | 19 | 313 | 20 | 312 | 2.67e-121 | 350 |
| MS.gene48807.t1 | MTR_3g094650 | 56.688 | 314 | 131 | 4 | 3 | 313 | 11 | 322 | 3.22e-121 | 351 |
| MS.gene48807.t1 | MTR_2g084020 | 55.096 | 314 | 138 | 3 | 1 | 313 | 7 | 318 | 8.39e-119 | 345 |
| MS.gene48807.t1 | MTR_7g072480 | 57.143 | 308 | 130 | 2 | 6 | 313 | 11 | 316 | 1.43e-118 | 344 |
| MS.gene48807.t1 | MTR_2g084000 | 55.556 | 315 | 135 | 5 | 2 | 313 | 7 | 319 | 2.10e-118 | 343 |
| MS.gene48807.t1 | MTR_4g029200 | 54.545 | 308 | 138 | 2 | 6 | 313 | 33 | 338 | 1.48e-117 | 342 |
| MS.gene48807.t1 | MTR_4g083710 | 55.346 | 318 | 135 | 5 | 1 | 313 | 9 | 324 | 2.87e-117 | 341 |
| MS.gene48807.t1 | MTR_3g094630 | 57.595 | 316 | 129 | 4 | 1 | 313 | 9 | 322 | 8.91e-117 | 340 |
| MS.gene48807.t1 | MTR_2g084080 | 52.716 | 313 | 146 | 2 | 1 | 313 | 7 | 317 | 2.03e-116 | 338 |
| MS.gene48807.t1 | MTR_3g466180 | 56.550 | 313 | 134 | 2 | 1 | 313 | 13 | 323 | 2.11e-116 | 338 |
| MS.gene48807.t1 | MTR_3g094670 | 56.329 | 316 | 133 | 4 | 1 | 313 | 9 | 322 | 3.72e-116 | 338 |
| MS.gene48807.t1 | MTR_2g084110 | 53.035 | 313 | 145 | 2 | 1 | 313 | 7 | 317 | 1.67e-115 | 336 |
| MS.gene48807.t1 | MTR_2g084010 | 53.822 | 314 | 142 | 3 | 1 | 313 | 7 | 318 | 4.37e-115 | 335 |
| MS.gene48807.t1 | MTR_2g084090 | 52.866 | 314 | 145 | 3 | 1 | 313 | 7 | 318 | 6.91e-114 | 332 |
| MS.gene48807.t1 | MTR_5g021060 | 55.446 | 303 | 125 | 4 | 19 | 313 | 30 | 330 | 6.31e-112 | 327 |
| MS.gene48807.t1 | MTR_4g029190 | 55.290 | 293 | 127 | 3 | 23 | 313 | 50 | 340 | 4.18e-111 | 326 |
| MS.gene48807.t1 | MTR_4g074995 | 53.312 | 317 | 126 | 6 | 2 | 313 | 9 | 308 | 9.59e-111 | 323 |
| MS.gene48807.t1 | MTR_1g115900 | 50.949 | 316 | 149 | 4 | 1 | 313 | 9 | 321 | 2.40e-109 | 321 |
| MS.gene48807.t1 | MTR_8g076820 | 54.426 | 305 | 129 | 4 | 17 | 313 | 28 | 330 | 2.92e-109 | 321 |
| MS.gene48807.t1 | MTR_7g026990 | 54.967 | 302 | 132 | 4 | 13 | 313 | 24 | 322 | 1.15e-108 | 319 |
| MS.gene48807.t1 | MTR_4g074990 | 52.698 | 315 | 125 | 6 | 3 | 313 | 11 | 305 | 4.25e-106 | 311 |
| MS.gene48807.t1 | MTR_5g074860 | 51.735 | 317 | 105 | 6 | 3 | 312 | 10 | 285 | 8.59e-106 | 310 |
| MS.gene48807.t1 | MTR_3g072190 | 60.714 | 252 | 97 | 2 | 62 | 313 | 2 | 251 | 2.49e-102 | 300 |
| MS.gene48807.t1 | MTR_1g022970 | 51.148 | 305 | 138 | 4 | 18 | 313 | 45 | 347 | 7.09e-102 | 303 |
| MS.gene48807.t1 | MTR_4g125940 | 50.774 | 323 | 144 | 5 | 2 | 313 | 11 | 329 | 5.28e-101 | 300 |
| MS.gene48807.t1 | MTR_2g028980 | 50.625 | 320 | 145 | 5 | 4 | 313 | 14 | 330 | 2.92e-99 | 296 |
| MS.gene48807.t1 | MTR_4g122640 | 49.511 | 307 | 147 | 4 | 13 | 313 | 32 | 336 | 2.17e-98 | 293 |
| MS.gene48807.t1 | MTR_5g014100 | 51.456 | 309 | 133 | 5 | 19 | 313 | 26 | 331 | 3.56e-97 | 290 |
| MS.gene48807.t1 | MTR_2g029815 | 48.438 | 320 | 154 | 4 | 3 | 313 | 13 | 330 | 3.71e-97 | 291 |
| MS.gene48807.t1 | MTR_1g054205 | 46.749 | 323 | 157 | 6 | 1 | 313 | 9 | 326 | 3.85e-97 | 290 |
| MS.gene48807.t1 | MTR_2g029800 | 48.589 | 319 | 153 | 4 | 4 | 313 | 14 | 330 | 7.84e-97 | 290 |
| MS.gene48807.t1 | MTR_2g040000 | 47.077 | 325 | 156 | 5 | 1 | 313 | 11 | 331 | 1.06e-96 | 289 |
| MS.gene48807.t1 | MTR_2g029820 | 48.589 | 319 | 153 | 4 | 4 | 313 | 14 | 330 | 1.36e-96 | 289 |
| MS.gene48807.t1 | MTR_7g093370 | 46.875 | 320 | 158 | 5 | 4 | 313 | 54 | 371 | 1.67e-96 | 290 |
| MS.gene48807.t1 | MTR_5g017850 | 45.794 | 321 | 163 | 4 | 1 | 313 | 9 | 326 | 4.91e-96 | 287 |
| MS.gene48807.t1 | MTR_2g029860 | 49.342 | 304 | 143 | 4 | 19 | 313 | 29 | 330 | 1.21e-95 | 287 |
| MS.gene48807.t1 | MTR_2g029750 | 47.022 | 319 | 158 | 4 | 4 | 313 | 14 | 330 | 4.27e-95 | 285 |
| MS.gene48807.t1 | MTR_2g029850 | 48.276 | 319 | 154 | 4 | 4 | 313 | 14 | 330 | 1.56e-94 | 284 |
| MS.gene48807.t1 | MTR_4g074980 | 48.726 | 314 | 131 | 9 | 2 | 313 | 9 | 294 | 1.92e-94 | 281 |
| MS.gene48807.t1 | MTR_5g017860 | 45.483 | 321 | 164 | 4 | 1 | 313 | 9 | 326 | 4.30e-94 | 282 |
| MS.gene48807.t1 | MTR_2g029830 | 48.684 | 304 | 145 | 4 | 19 | 313 | 28 | 329 | 8.85e-93 | 280 |
| MS.gene48807.t1 | MTR_2g029740 | 46.395 | 319 | 160 | 4 | 4 | 313 | 14 | 330 | 2.80e-92 | 278 |
| MS.gene48807.t1 | MTR_5g049280 | 48.710 | 310 | 139 | 8 | 19 | 313 | 33 | 337 | 3.83e-92 | 277 |
| MS.gene48807.t1 | MTR_2g029560 | 47.213 | 305 | 148 | 5 | 19 | 313 | 24 | 325 | 1.23e-91 | 276 |
| MS.gene48807.t1 | MTR_4g125940 | 53.430 | 277 | 114 | 5 | 48 | 313 | 2 | 274 | 1.94e-90 | 271 |
| MS.gene48807.t1 | MTR_2g029910 | 45.938 | 320 | 161 | 5 | 4 | 313 | 15 | 332 | 3.52e-90 | 273 |
| MS.gene48807.t1 | MTR_4g030890 | 48.065 | 310 | 147 | 6 | 12 | 313 | 93 | 396 | 3.43e-88 | 270 |
| MS.gene48807.t1 | MTR_4g074980 | 54.618 | 249 | 104 | 6 | 2 | 245 | 9 | 253 | 1.41e-87 | 263 |
| MS.gene48807.t1 | MTR_2g029730 | 45.938 | 320 | 160 | 5 | 4 | 313 | 10 | 326 | 8.10e-87 | 264 |
| MS.gene48807.t1 | MTR_4g031140 | 46.429 | 308 | 151 | 6 | 14 | 313 | 23 | 324 | 1.58e-86 | 263 |
| MS.gene48807.t1 | MTR_2g088770 | 42.368 | 321 | 172 | 7 | 2 | 313 | 9 | 325 | 2.29e-82 | 252 |
| MS.gene48807.t1 | MTR_8g075100 | 42.671 | 307 | 161 | 6 | 14 | 313 | 21 | 319 | 8.60e-81 | 248 |
| MS.gene48807.t1 | MTR_1g101830 | 41.745 | 321 | 169 | 8 | 1 | 313 | 12 | 322 | 1.20e-79 | 245 |
| MS.gene48807.t1 | MTR_0155s0040 | 40.940 | 298 | 168 | 6 | 17 | 313 | 25 | 315 | 1.27e-79 | 244 |
| MS.gene48807.t1 | MTR_5g022870 | 40.881 | 318 | 173 | 6 | 3 | 313 | 7 | 316 | 5.62e-79 | 243 |
| MS.gene48807.t1 | MTR_5g074700 | 56.140 | 228 | 84 | 5 | 88 | 313 | 1 | 214 | 2.19e-78 | 238 |
| MS.gene48807.t1 | MTR_1g086320 | 43.344 | 323 | 168 | 6 | 4 | 313 | 13 | 333 | 4.07e-78 | 241 |
| MS.gene48807.t1 | MTR_7g029030 | 41.195 | 318 | 179 | 6 | 1 | 313 | 6 | 320 | 1.03e-77 | 240 |
| MS.gene48807.t1 | MTR_1g025980 | 41.456 | 316 | 170 | 6 | 1 | 309 | 7 | 314 | 8.18e-77 | 238 |
| MS.gene48807.t1 | MTR_4g046713 | 39.937 | 318 | 180 | 5 | 4 | 313 | 12 | 326 | 1.47e-76 | 237 |
| MS.gene48807.t1 | MTR_3g092990 | 40.752 | 319 | 179 | 4 | 3 | 313 | 10 | 326 | 1.71e-76 | 237 |
| MS.gene48807.t1 | MTR_1g086490 | 43.202 | 331 | 164 | 7 | 4 | 313 | 13 | 340 | 2.28e-76 | 237 |
| MS.gene48807.t1 | MTR_2g029830 | 49.612 | 258 | 119 | 4 | 65 | 313 | 6 | 261 | 2.97e-76 | 235 |
| MS.gene48807.t1 | MTR_1g077000 | 39.683 | 315 | 180 | 7 | 2 | 313 | 20 | 327 | 4.16e-76 | 236 |
| MS.gene48807.t1 | MTR_2g008710 | 41.538 | 325 | 171 | 7 | 1 | 313 | 8 | 325 | 5.78e-76 | 236 |
| MS.gene48807.t1 | MTR_1g009750 | 40.867 | 323 | 174 | 8 | 1 | 313 | 13 | 328 | 1.34e-72 | 227 |
| MS.gene48807.t1 | MTR_7g086870 | 40.203 | 296 | 170 | 5 | 19 | 313 | 22 | 311 | 1.76e-72 | 226 |
| MS.gene48807.t1 | MTR_4g114210 | 41.796 | 323 | 167 | 7 | 3 | 313 | 7 | 320 | 5.24e-72 | 225 |
| MS.gene48807.t1 | MTR_1g038680 | 41.391 | 302 | 164 | 6 | 23 | 313 | 33 | 332 | 9.86e-70 | 220 |
| MS.gene48807.t1 | MTR_6g027440 | 36.164 | 318 | 192 | 6 | 1 | 313 | 3 | 314 | 1.04e-69 | 219 |
| MS.gene48807.t1 | MTR_2g008160 | 41.883 | 308 | 162 | 6 | 17 | 313 | 22 | 323 | 1.05e-68 | 217 |
| MS.gene48807.t1 | MTR_7g107520 | 38.199 | 322 | 183 | 7 | 2 | 313 | 5 | 320 | 2.08e-68 | 216 |
| MS.gene48807.t1 | MTR_1g090760 | 39.564 | 321 | 181 | 7 | 4 | 313 | 12 | 330 | 3.48e-68 | 216 |
| MS.gene48807.t1 | MTR_6g043280 | 40.333 | 300 | 172 | 6 | 16 | 313 | 38 | 332 | 4.66e-68 | 216 |
| MS.gene48807.t1 | MTR_4g087965 | 41.270 | 315 | 171 | 7 | 7 | 309 | 30 | 342 | 2.01e-67 | 214 |
| MS.gene48807.t1 | MTR_4g095450 | 39.550 | 311 | 181 | 5 | 4 | 309 | 12 | 320 | 3.89e-67 | 213 |
| MS.gene48807.t1 | MTR_4g127670 | 40.461 | 304 | 168 | 6 | 19 | 313 | 24 | 323 | 6.38e-67 | 212 |
| MS.gene48807.t1 | MTR_4g133800 | 40.468 | 299 | 160 | 7 | 23 | 313 | 45 | 333 | 6.59e-67 | 213 |
| MS.gene48807.t1 | MTR_5g016010 | 37.618 | 319 | 185 | 6 | 1 | 309 | 11 | 325 | 1.01e-66 | 212 |
| MS.gene48807.t1 | MTR_2g437770 | 42.904 | 303 | 154 | 8 | 19 | 313 | 50 | 341 | 1.78e-66 | 212 |
| MS.gene48807.t1 | MTR_3g072210 | 57.527 | 186 | 76 | 3 | 130 | 313 | 54 | 238 | 1.98e-66 | 208 |
| MS.gene48807.t1 | MTR_7g086820 | 36.667 | 300 | 178 | 5 | 19 | 313 | 20 | 312 | 1.65e-65 | 208 |
| MS.gene48807.t1 | MTR_3g092990 | 38.558 | 319 | 175 | 5 | 3 | 313 | 10 | 315 | 1.38e-64 | 206 |
| MS.gene48807.t1 | MTR_2g099175 | 38.558 | 319 | 177 | 7 | 7 | 313 | 24 | 335 | 1.82e-63 | 204 |
| MS.gene48807.t1 | MTR_1g009750 | 37.888 | 322 | 168 | 9 | 1 | 313 | 13 | 311 | 3.07e-62 | 200 |
| MS.gene48807.t1 | MTR_8g062780 | 35.514 | 321 | 196 | 5 | 2 | 313 | 6 | 324 | 1.22e-61 | 199 |
| MS.gene48807.t1 | MTR_6g043460 | 36.223 | 323 | 191 | 6 | 2 | 313 | 10 | 328 | 1.31e-61 | 199 |
| MS.gene48807.t1 | MTR_0286s0010 | 35.938 | 320 | 195 | 6 | 2 | 313 | 17 | 334 | 2.70e-61 | 198 |
| MS.gene48807.t1 | MTR_6g008075 | 35.938 | 320 | 195 | 6 | 2 | 313 | 17 | 334 | 2.70e-61 | 198 |
| MS.gene48807.t1 | MTR_2g078610 | 38.024 | 334 | 165 | 8 | 17 | 311 | 74 | 404 | 2.92e-61 | 200 |
| MS.gene48807.t1 | MTR_2g077990 | 38.323 | 334 | 164 | 8 | 17 | 311 | 74 | 404 | 2.95e-61 | 200 |
| MS.gene48807.t1 | MTR_6g043240 | 36.624 | 314 | 190 | 6 | 2 | 313 | 25 | 331 | 3.75e-61 | 198 |
| MS.gene48807.t1 | MTR_2g067440 | 38.024 | 334 | 164 | 9 | 17 | 312 | 58 | 386 | 1.50e-60 | 198 |
| MS.gene48807.t1 | MTR_2g008730 | 38.154 | 325 | 158 | 7 | 1 | 313 | 8 | 301 | 8.25e-59 | 191 |
| MS.gene48807.t1 | MTR_4g132490 | 34.219 | 301 | 190 | 4 | 19 | 313 | 29 | 327 | 1.90e-57 | 188 |
| MS.gene48807.t1 | MTR_3g105790 | 37.072 | 321 | 186 | 5 | 3 | 313 | 8 | 322 | 2.50e-57 | 187 |
| MS.gene48807.t1 | MTR_2g008160 | 38.411 | 302 | 146 | 6 | 17 | 313 | 22 | 288 | 1.71e-54 | 179 |
| MS.gene48807.t1 | MTR_2g078280 | 37.267 | 322 | 160 | 8 | 17 | 299 | 74 | 392 | 2.78e-54 | 182 |
| MS.gene48807.t1 | MTR_1g066380 | 34.983 | 303 | 189 | 5 | 16 | 313 | 24 | 323 | 6.13e-54 | 179 |
| MS.gene48807.t1 | MTR_1g066710 | 35.762 | 302 | 186 | 5 | 17 | 313 | 25 | 323 | 9.72e-54 | 178 |
| MS.gene48807.t1 | MTR_7g072490 | 43.802 | 242 | 80 | 4 | 65 | 306 | 2 | 187 | 1.36e-52 | 172 |
| MS.gene48807.t1 | MTR_1g066640 | 36.093 | 302 | 185 | 5 | 17 | 313 | 25 | 323 | 1.84e-52 | 175 |
| MS.gene48807.t1 | MTR_1g066680 | 34.768 | 302 | 188 | 6 | 17 | 313 | 25 | 322 | 8.03e-51 | 171 |
| MS.gene48807.t1 | MTR_4g132110 | 33.444 | 302 | 193 | 5 | 17 | 313 | 30 | 328 | 9.98e-51 | 171 |
| MS.gene48807.t1 | MTR_5g033470 | 31.922 | 307 | 195 | 6 | 19 | 313 | 73 | 377 | 4.11e-50 | 171 |
| MS.gene48807.t1 | MTR_4g132110 | 32.899 | 307 | 193 | 6 | 17 | 313 | 30 | 333 | 2.50e-48 | 165 |
| MS.gene48807.t1 | MTR_2g067450 | 36.156 | 307 | 179 | 9 | 17 | 312 | 9 | 309 | 4.30e-47 | 161 |
| MS.gene48807.t1 | MTR_2g008160 | 46.591 | 176 | 88 | 4 | 17 | 192 | 22 | 191 | 2.02e-44 | 150 |
| MS.gene48807.t1 | MTR_0147s0010 | 31.153 | 321 | 178 | 7 | 19 | 312 | 77 | 381 | 3.94e-44 | 155 |
| MS.gene48807.t1 | MTR_1g066380 | 34.375 | 256 | 160 | 5 | 63 | 313 | 3 | 255 | 3.25e-42 | 146 |
| MS.gene48807.t1 | MTR_3g072260 | 58.647 | 133 | 46 | 3 | 2 | 128 | 5 | 134 | 2.54e-41 | 140 |
| MS.gene48807.t1 | MTR_2g029880 | 42.708 | 192 | 88 | 5 | 132 | 313 | 9 | 188 | 3.50e-40 | 140 |
| MS.gene48807.t1 | MTR_3g105790 | 37.759 | 241 | 139 | 3 | 82 | 313 | 8 | 246 | 1.06e-39 | 140 |
| MS.gene48807.t1 | MTR_3g086710 | 85.938 | 64 | 9 | 0 | 1 | 64 | 1 | 64 | 2.61e-32 | 115 |
| MS.gene48807.t1 | MTR_2g077980 | 33.333 | 276 | 135 | 9 | 81 | 311 | 11 | 282 | 3.79e-29 | 113 |
| MS.gene48807.t1 | MTR_2g078560 | 33.036 | 224 | 109 | 6 | 125 | 309 | 95 | 316 | 2.48e-28 | 112 |
| MS.gene48807.t1 | MTR_3g462850 | 45.833 | 144 | 60 | 6 | 185 | 313 | 9 | 149 | 3.33e-28 | 107 |
| MS.gene48807.t1 | MTR_5g074770 | 50.538 | 93 | 43 | 2 | 222 | 312 | 17 | 108 | 6.13e-24 | 94.4 |
| MS.gene48807.t1 | MTR_5g058120 | 35.714 | 154 | 95 | 2 | 156 | 309 | 6 | 155 | 1.31e-22 | 95.1 |
| MS.gene48807.t1 | MTR_7g086790 | 39.344 | 122 | 68 | 3 | 66 | 187 | 17 | 132 | 1.05e-19 | 85.5 |
| MS.gene48807.t1 | MTR_1g089005 | 40.336 | 119 | 63 | 3 | 19 | 131 | 15 | 131 | 2.65e-18 | 80.9 |
| MS.gene48807.t1 | MTR_4g114220 | 50.602 | 83 | 30 | 3 | 45 | 127 | 29 | 100 | 6.73e-17 | 76.6 |
| MS.gene48807.t1 | MTR_6g048160 | 54.930 | 71 | 27 | 3 | 58 | 128 | 22 | 87 | 2.52e-16 | 73.6 |
| MS.gene48807.t1 | MTR_2g029930 | 37.037 | 108 | 43 | 2 | 1 | 97 | 1 | 94 | 1.32e-15 | 72.0 |
| MS.gene48807.t1 | MTR_3g088160 | 28.846 | 260 | 142 | 10 | 53 | 295 | 121 | 354 | 3.69e-15 | 75.9 |
| MS.gene48807.t1 | MTR_3g088160 | 28.462 | 260 | 143 | 10 | 53 | 295 | 121 | 354 | 5.23e-15 | 75.5 |
| MS.gene48807.t1 | MTR_1g098320 | 41.026 | 78 | 46 | 0 | 236 | 313 | 47 | 124 | 3.35e-14 | 68.9 |
| MS.gene48807.t1 | MTR_4g012865 | 41.667 | 72 | 42 | 0 | 19 | 90 | 77 | 148 | 2.53e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48807.t1 | AT5G05340 | 62.626 | 297 | 107 | 3 | 19 | 313 | 30 | 324 | 2.31e-130 | 374 |
| MS.gene48807.t1 | AT1G14550 | 54.603 | 315 | 139 | 4 | 2 | 313 | 8 | 321 | 3.38e-115 | 335 |
| MS.gene48807.t1 | AT5G58400 | 53.503 | 314 | 143 | 2 | 2 | 313 | 13 | 325 | 1.07e-113 | 332 |
| MS.gene48807.t1 | AT5G58390 | 55.128 | 312 | 137 | 2 | 4 | 313 | 6 | 316 | 1.60e-112 | 328 |
| MS.gene48807.t1 | AT4G36430 | 53.465 | 303 | 131 | 4 | 19 | 313 | 30 | 330 | 3.25e-111 | 326 |
| MS.gene48807.t1 | AT2G18150 | 53.135 | 303 | 132 | 4 | 19 | 313 | 36 | 336 | 9.80e-111 | 325 |
| MS.gene48807.t1 | AT2G18140 | 53.135 | 303 | 132 | 4 | 19 | 313 | 35 | 335 | 3.85e-108 | 318 |
| MS.gene48807.t1 | AT1G14540 | 51.746 | 315 | 148 | 4 | 1 | 313 | 3 | 315 | 7.18e-108 | 317 |
| MS.gene48807.t1 | AT5G06720 | 49.530 | 319 | 150 | 4 | 4 | 313 | 17 | 333 | 1.20e-105 | 311 |
| MS.gene48807.t1 | AT3G50990 | 50.000 | 310 | 145 | 4 | 12 | 313 | 34 | 341 | 2.57e-105 | 311 |
| MS.gene48807.t1 | AT1G44970 | 50.980 | 306 | 139 | 4 | 17 | 313 | 43 | 346 | 4.55e-104 | 308 |
| MS.gene48807.t1 | AT5G66390 | 49.530 | 319 | 151 | 4 | 3 | 313 | 17 | 333 | 8.12e-104 | 307 |
| MS.gene48807.t1 | AT5G06730 | 47.022 | 319 | 158 | 4 | 4 | 313 | 18 | 334 | 1.81e-100 | 299 |
| MS.gene48807.t1 | AT3G32980 | 48.366 | 306 | 145 | 5 | 19 | 313 | 31 | 334 | 7.70e-97 | 290 |
| MS.gene48807.t1 | AT3G49110 | 48.701 | 308 | 145 | 5 | 17 | 313 | 31 | 336 | 9.16e-96 | 287 |
| MS.gene48807.t1 | AT3G49120 | 46.965 | 313 | 153 | 5 | 12 | 313 | 25 | 335 | 2.66e-94 | 283 |
| MS.gene48807.t1 | AT4G08770 | 48.366 | 306 | 145 | 5 | 19 | 313 | 24 | 327 | 8.41e-93 | 280 |
| MS.gene48807.t1 | AT2G35380 | 48.160 | 326 | 148 | 7 | 6 | 313 | 13 | 335 | 5.28e-92 | 277 |
| MS.gene48807.t1 | AT1G49570 | 48.185 | 303 | 145 | 5 | 17 | 309 | 46 | 346 | 2.62e-91 | 276 |
| MS.gene48807.t1 | AT4G08780 | 47.386 | 306 | 148 | 5 | 19 | 313 | 24 | 327 | 3.61e-91 | 275 |
| MS.gene48807.t1 | AT1G68850 | 45.779 | 308 | 152 | 6 | 19 | 313 | 30 | 335 | 2.15e-90 | 273 |
| MS.gene48807.t1 | AT4G16270 | 48.322 | 298 | 142 | 5 | 24 | 313 | 55 | 348 | 3.37e-90 | 273 |
| MS.gene48807.t1 | AT2G38380 | 45.820 | 323 | 158 | 7 | 5 | 313 | 14 | 333 | 6.12e-90 | 272 |
| MS.gene48807.t1 | AT5G19890 | 46.462 | 325 | 153 | 8 | 1 | 313 | 12 | 327 | 1.26e-89 | 271 |
| MS.gene48807.t1 | AT2G38390 | 44.872 | 312 | 160 | 5 | 12 | 313 | 24 | 333 | 4.45e-88 | 268 |
| MS.gene48807.t1 | AT5G19880 | 44.951 | 307 | 155 | 5 | 19 | 313 | 25 | 329 | 5.01e-83 | 254 |
| MS.gene48807.t1 | AT2G22420 | 43.218 | 317 | 166 | 6 | 6 | 313 | 8 | 319 | 1.65e-82 | 253 |
| MS.gene48807.t1 | AT5G42180 | 40.881 | 318 | 174 | 5 | 1 | 311 | 5 | 315 | 5.41e-80 | 246 |
| MS.gene48807.t1 | AT3G01190 | 42.188 | 320 | 167 | 8 | 2 | 313 | 12 | 321 | 1.97e-79 | 244 |
| MS.gene48807.t1 | AT1G71695 | 42.193 | 301 | 169 | 4 | 16 | 313 | 41 | 339 | 3.29e-78 | 243 |
| MS.gene48807.t1 | AT5G51890 | 42.679 | 321 | 166 | 9 | 4 | 313 | 9 | 322 | 1.28e-77 | 240 |
| MS.gene48807.t1 | AT5G64120 | 41.776 | 304 | 164 | 5 | 16 | 313 | 32 | 328 | 1.80e-77 | 239 |
| MS.gene48807.t1 | AT5G15180 | 41.049 | 324 | 175 | 8 | 1 | 313 | 11 | 329 | 5.31e-77 | 238 |
| MS.gene48807.t1 | AT1G05260 | 41.745 | 321 | 170 | 8 | 2 | 313 | 13 | 325 | 1.48e-76 | 237 |
| MS.gene48807.t1 | AT3G03670 | 39.498 | 319 | 183 | 4 | 2 | 313 | 6 | 321 | 6.83e-75 | 233 |
| MS.gene48807.t1 | AT3G21770 | 41.083 | 314 | 172 | 7 | 8 | 312 | 18 | 327 | 7.55e-75 | 233 |
| MS.gene48807.t1 | AT4G11290 | 39.752 | 322 | 181 | 7 | 2 | 313 | 8 | 326 | 3.31e-74 | 231 |
| MS.gene48807.t1 | AT5G17820 | 39.365 | 315 | 172 | 6 | 6 | 313 | 11 | 313 | 6.20e-74 | 230 |
| MS.gene48807.t1 | AT5G17820 | 39.365 | 315 | 172 | 6 | 6 | 313 | 64 | 366 | 7.45e-73 | 229 |
| MS.gene48807.t1 | AT4G33420 | 41.892 | 296 | 164 | 6 | 19 | 313 | 37 | 325 | 1.30e-72 | 227 |
| MS.gene48807.t1 | AT1G05240 | 41.311 | 305 | 164 | 7 | 19 | 313 | 26 | 325 | 3.15e-72 | 226 |
| MS.gene48807.t1 | AT1G05250 | 41.311 | 305 | 164 | 7 | 19 | 313 | 26 | 325 | 3.15e-72 | 226 |
| MS.gene48807.t1 | AT4G33420 | 41.892 | 296 | 164 | 6 | 19 | 313 | 84 | 372 | 6.22e-72 | 227 |
| MS.gene48807.t1 | AT2G41480 | 40.308 | 325 | 173 | 7 | 1 | 313 | 13 | 328 | 6.74e-72 | 225 |
| MS.gene48807.t1 | AT5G39580 | 41.562 | 320 | 172 | 8 | 2 | 313 | 7 | 319 | 8.12e-71 | 222 |
| MS.gene48807.t1 | AT5G40150 | 40.645 | 310 | 178 | 5 | 8 | 313 | 21 | 328 | 7.01e-70 | 220 |
| MS.gene48807.t1 | AT5G14130 | 38.318 | 321 | 186 | 6 | 1 | 313 | 14 | 330 | 1.11e-69 | 220 |
| MS.gene48807.t1 | AT5G14130 | 38.318 | 321 | 186 | 6 | 1 | 313 | 55 | 371 | 3.09e-69 | 220 |
| MS.gene48807.t1 | AT2G18980 | 39.062 | 320 | 179 | 6 | 4 | 313 | 10 | 323 | 3.80e-69 | 218 |
| MS.gene48807.t1 | AT4G26010 | 38.854 | 314 | 180 | 7 | 1 | 313 | 7 | 309 | 5.70e-69 | 217 |
| MS.gene48807.t1 | AT4G26010 | 38.854 | 314 | 180 | 7 | 1 | 313 | 35 | 337 | 1.42e-68 | 217 |
| MS.gene48807.t1 | AT2G35380 | 49.398 | 249 | 111 | 5 | 78 | 313 | 1 | 247 | 1.53e-68 | 214 |
| MS.gene48807.t1 | AT5G67400 | 38.608 | 316 | 182 | 5 | 4 | 309 | 12 | 325 | 2.33e-68 | 216 |
| MS.gene48807.t1 | AT4G30170 | 39.216 | 306 | 172 | 6 | 17 | 313 | 25 | 325 | 1.09e-66 | 212 |
| MS.gene48807.t1 | AT3G28200 | 39.604 | 303 | 178 | 5 | 14 | 313 | 16 | 316 | 2.53e-66 | 211 |
| MS.gene48807.t1 | AT1G30870 | 41.830 | 306 | 156 | 8 | 19 | 313 | 51 | 345 | 1.14e-65 | 210 |
| MS.gene48807.t1 | AT5G47000 | 38.245 | 319 | 187 | 7 | 1 | 313 | 16 | 330 | 1.42e-65 | 209 |
| MS.gene48807.t1 | AT3G49960 | 37.342 | 316 | 186 | 5 | 4 | 309 | 12 | 325 | 2.35e-65 | 209 |
| MS.gene48807.t1 | AT4G37530 | 38.742 | 302 | 175 | 4 | 17 | 309 | 25 | 325 | 2.71e-64 | 206 |
| MS.gene48807.t1 | AT5G64110 | 40.923 | 325 | 169 | 8 | 2 | 313 | 16 | 330 | 4.19e-64 | 205 |
| MS.gene48807.t1 | AT4G33870 | 34.024 | 338 | 178 | 6 | 17 | 312 | 66 | 400 | 5.24e-64 | 207 |
| MS.gene48807.t1 | AT5G64100 | 40.924 | 303 | 159 | 7 | 21 | 313 | 39 | 331 | 5.35e-64 | 205 |
| MS.gene48807.t1 | AT1G34510 | 37.217 | 309 | 185 | 6 | 6 | 313 | 9 | 309 | 4.16e-63 | 202 |
| MS.gene48807.t1 | AT4G17690 | 39.333 | 300 | 174 | 6 | 19 | 313 | 26 | 322 | 1.95e-62 | 201 |
| MS.gene48807.t1 | AT4G31760 | 37.578 | 322 | 185 | 5 | 1 | 313 | 12 | 326 | 9.88e-62 | 199 |
| MS.gene48807.t1 | AT5G22410 | 35.404 | 322 | 187 | 10 | 1 | 310 | 10 | 322 | 7.78e-61 | 197 |
| MS.gene48807.t1 | AT4G37520 | 37.748 | 302 | 178 | 4 | 17 | 309 | 25 | 325 | 1.01e-60 | 197 |
| MS.gene48807.t1 | AT2G39040 | 40.514 | 311 | 163 | 11 | 19 | 313 | 46 | 350 | 1.71e-60 | 197 |
| MS.gene48807.t1 | AT1G24110 | 37.224 | 317 | 187 | 7 | 6 | 313 | 9 | 322 | 4.12e-60 | 195 |
| MS.gene48807.t1 | AT4G37520 | 37.417 | 302 | 176 | 5 | 17 | 309 | 25 | 322 | 5.79e-59 | 192 |
| MS.gene48807.t1 | AT4G25980 | 37.299 | 311 | 177 | 6 | 15 | 313 | 22 | 326 | 5.01e-58 | 189 |
| MS.gene48807.t1 | AT2G24800 | 36.364 | 308 | 180 | 5 | 16 | 313 | 28 | 329 | 6.84e-57 | 187 |
| MS.gene48807.t1 | AT5G24070 | 36.716 | 335 | 180 | 10 | 3 | 313 | 9 | 335 | 1.00e-56 | 187 |
| MS.gene48807.t1 | AT4G37530 | 40.000 | 255 | 143 | 4 | 17 | 262 | 25 | 278 | 3.48e-56 | 183 |
| MS.gene48807.t1 | AT2G34060 | 36.556 | 331 | 187 | 8 | 1 | 310 | 15 | 343 | 1.19e-55 | 184 |
| MS.gene48807.t1 | AT1G77100 | 37.500 | 320 | 187 | 9 | 1 | 313 | 6 | 319 | 1.82e-55 | 183 |
| MS.gene48807.t1 | AT2G43480 | 35.913 | 323 | 181 | 9 | 5 | 313 | 25 | 335 | 1.95e-54 | 181 |
| MS.gene48807.t1 | AT2G37130 | 36.545 | 301 | 182 | 6 | 19 | 313 | 30 | 327 | 3.34e-54 | 180 |
| MS.gene48807.t1 | AT2G37130 | 36.577 | 298 | 180 | 6 | 22 | 313 | 2 | 296 | 4.41e-54 | 179 |
| MS.gene48807.t1 | AT4G21960 | 33.876 | 307 | 195 | 5 | 12 | 313 | 24 | 327 | 2.25e-53 | 177 |
| MS.gene48807.t1 | AT3G17070 | 34.628 | 309 | 181 | 7 | 19 | 313 | 38 | 339 | 4.54e-47 | 162 |
| MS.gene48807.t1 | AT5G39580 | 41.627 | 209 | 110 | 7 | 2 | 209 | 7 | 204 | 5.86e-41 | 142 |
| MS.gene48807.t1 | AT4G25980 | 43.017 | 179 | 96 | 4 | 14 | 192 | 66 | 238 | 2.00e-38 | 137 |
| MS.gene48807.t1 | AT3G17070 | 34.457 | 267 | 153 | 8 | 61 | 313 | 18 | 276 | 1.68e-35 | 129 |
| MS.gene48807.t1 | AT2G24800 | 39.487 | 195 | 106 | 6 | 16 | 209 | 28 | 211 | 1.06e-34 | 127 |
| MS.gene48807.t1 | AT1G77490 | 24.615 | 260 | 153 | 8 | 53 | 295 | 106 | 339 | 3.21e-14 | 73.2 |
| MS.gene48807.t1 | AT1G77490 | 24.615 | 260 | 153 | 8 | 53 | 295 | 106 | 339 | 3.64e-14 | 73.2 |
| MS.gene48807.t1 | AT4G35970 | 27.165 | 254 | 127 | 9 | 32 | 274 | 13 | 219 | 4.11e-12 | 65.1 |
Find 53 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAGTTGAATTTATATT+TGG | 0.137169 | 4.4:-73709307 | None:intergenic |
| TTGTGATGGTTCAATTCTTC+TGG | 0.196064 | 4.4:+73709246 | MS.gene48807:CDS |
| AATATCTTGATGATCTTAAT+TGG | 0.198524 | 4.4:-73710764 | None:intergenic |
| TGAAGTGGTTGATGAGATTA+AGG | 0.263243 | 4.4:+73709333 | MS.gene48807:CDS |
| CTAATAGTGCTCAAAGCATT+AGG | 0.267809 | 4.4:-73708350 | None:intergenic |
| TCGGATCAGGAATTATTAAA+TGG | 0.273047 | 4.4:+73710598 | MS.gene48807:CDS |
| GGAAATATTAAGCCACTTAC+TGG | 0.284799 | 4.4:+73710706 | MS.gene48807:CDS |
| AAAGACCTCGTTGCCCTATC+TGG | 0.286567 | 4.4:+73710364 | MS.gene48807:CDS |
| TTATTAAATGGTGATTATAC+TGG | 0.313939 | 4.4:+73710610 | MS.gene48807:CDS |
| AGTCGTGCCGCTGCAGATTC+AGG | 0.315066 | 4.4:+73710271 | MS.gene48807:CDS |
| GTGAAATTCGTTCAAATTGC+AGG | 0.340953 | 4.4:+73710737 | MS.gene48807:CDS |
| TGCGAAATCTATGATTAAGA+TGG | 0.368103 | 4.4:+73710684 | MS.gene48807:CDS |
| AAAGAAAGGGCTTCTTCATT+CGG | 0.378097 | 4.4:+73710579 | MS.gene48807:CDS |
| CCTAGTTGCACTTTCCATGA+TGG | 0.386662 | 4.4:-73710226 | None:intergenic |
| CTATCTGGAGCACACACTAT+TGG | 0.391267 | 4.4:+73710379 | MS.gene48807:CDS |
| TGTTCTTGTCATTGTAGATT+CGG | 0.397423 | 4.4:-73710429 | None:intergenic |
| CAATAGTGTGTGCTCCAGAT+AGG | 0.400931 | 4.4:-73710378 | None:intergenic |
| TAATAGTGCTCAAAGCATTA+GGG | 0.431156 | 4.4:-73708349 | None:intergenic |
| AGAAAGACTGAATGATGGTC+CGG | 0.452732 | 4.4:-73710302 | None:intergenic |
| TGTTTCTTGTGCAGACATAT+TGG | 0.453461 | 4.4:+73709387 | MS.gene48807:CDS |
| AGGGCTTCTTCATTCGGATC+AGG | 0.466116 | 4.4:+73710585 | MS.gene48807:CDS |
| TCACCTTGACTCCCAGTAAG+TGG | 0.470456 | 4.4:-73710718 | None:intergenic |
| TCTGGACTCTACACCTTCCA+TGG | 0.473704 | 4.4:+73709264 | MS.gene48807:CDS |
| ATGTCTGCACAAGAAACAAC+TGG | 0.493198 | 4.4:-73709382 | None:intergenic |
| GCGAAATCTATGATTAAGAT+GGG | 0.499275 | 4.4:+73710685 | MS.gene48807:CDS |
| GATCGTTGGTTAGAAAATAT+AGG | 0.503912 | 4.4:+73710632 | MS.gene48807:CDS |
| TTGGAGTCTCCTCCTTCTCT+AGG | 0.512234 | 4.4:-73710490 | None:intergenic |
| ATTTGATGTGTCATATTACC+AGG | 0.518981 | 4.4:+73710546 | MS.gene48807:CDS |
| ATGGTGATTTAGGGTTGTGA+TGG | 0.519295 | 4.4:+73709232 | MS.gene48807:intron |
| GAAAGACTGAATGATGGTCC+GGG | 0.528311 | 4.4:-73710301 | None:intergenic |
| ACAGTCTAGAGCTGCAAGGT+TGG | 0.528477 | 4.4:-73710509 | None:intergenic |
| GCAGATTCAGGCAACATCCC+CGG | 0.534879 | 4.4:+73710283 | MS.gene48807:CDS |
| AATAGTGTGTGCTCCAGATA+GGG | 0.548473 | 4.4:-73710377 | None:intergenic |
| GACATTTGTCCTAGAGAAGG+AGG | 0.551440 | 4.4:+73710481 | MS.gene48807:CDS |
| CCATCATGGAAAGTGCAACT+AGG | 0.563223 | 4.4:+73710226 | MS.gene48807:CDS |
| CAAGACATTTGTCCTAGAGA+AGG | 0.565670 | 4.4:+73710478 | MS.gene48807:CDS |
| TGCAGTTAGGAGGACCATCA+TGG | 0.582902 | 4.4:+73710212 | MS.gene48807:intron |
| TGGTGATTATACTGGATCGT+TGG | 0.583357 | 4.4:+73710618 | MS.gene48807:CDS |
| CCAAATATAAATTCAACTAG+AGG | 0.594419 | 4.4:+73709307 | MS.gene48807:CDS |
| AAGCCACTTACTGGGAGTCA+AGG | 0.611405 | 4.4:+73710715 | MS.gene48807:CDS |
| GAAGCTGTTGATAAAGCATG+TGG | 0.618722 | 4.4:+73709355 | MS.gene48807:CDS |
| TTCAACTAGAGGATTTGAAG+TGG | 0.618774 | 4.4:+73709318 | MS.gene48807:CDS |
| TGCAAGAGACTCTGTCGTTG+CGG | 0.621078 | 4.4:+73709417 | MS.gene48807:CDS |
| GAAATATTAAGCCACTTACT+GGG | 0.622320 | 4.4:+73710707 | MS.gene48807:CDS |
| TTATATATGATGCAGTTAGG+AGG | 0.622538 | 4.4:+73710202 | MS.gene48807:intron |
| AGTTGAGAAAGACTGAATGA+TGG | 0.626761 | 4.4:-73710307 | None:intergenic |
| GATGTTGCCTGAATCTGCAG+CGG | 0.638541 | 4.4:-73710278 | None:intergenic |
| GTAGTAAAGAGCCACCCATA+CGG | 0.639551 | 4.4:-73708406 | None:intergenic |
| AGCTCTAGACTGTGTTACAC+CGG | 0.650454 | 4.4:+73710519 | MS.gene48807:CDS |
| TAACACAGTCTAGAGCTGCA+AGG | 0.710102 | 4.4:-73710513 | None:intergenic |
| GAGATGCTAACACTATTGCG+AGG | 0.718139 | 4.4:-73708274 | None:intergenic |
| AAAGACTGAATGATGGTCCG+GGG | 0.721286 | 4.4:-73710300 | None:intergenic |
| GTGCTCCAGATAGGGCAACG+AGG | 0.748414 | 4.4:-73710369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGTAAAAATTAGAA+AGG | - | chr4.4:73708705-73708724 | None:intergenic | 10.0% |
| !! | GATAAAATAAAGTTAATAAA+AGG | + | chr4.4:73709525-73709544 | MS.gene48807:intron | 10.0% |
| !! | GGTAAAATATAAATAAAATT+GGG | - | chr4.4:73708605-73708624 | None:intergenic | 10.0% |
| !! | TGGTAAAATATAAATAAAAT+TGG | - | chr4.4:73708606-73708625 | None:intergenic | 10.0% |
| !! | TTGAATATATCAAAATTAAA+AGG | + | chr4.4:73709633-73709652 | MS.gene48807:intron | 10.0% |
| !! | ATATATCAAAATTAAAAGGA+AGG | + | chr4.4:73709637-73709656 | MS.gene48807:intron | 15.0% |
| !! | ATTATCTTGTGATATTATTT+AGG | - | chr4.4:73709932-73709951 | None:intergenic | 15.0% |
| !! | GATAATTAAGATTTATTTGA+TGG | + | chr4.4:73709946-73709965 | MS.gene48807:intron | 15.0% |
| !! | TGAAAATCTATAAATAACTT+TGG | - | chr4.4:73708660-73708679 | None:intergenic | 15.0% |
| !! | TTATCTTGTGATATTATTTA+GGG | - | chr4.4:73709931-73709950 | None:intergenic | 15.0% |
| !!! | AATTTTGATATATTCAAAGT+TGG | - | chr4.4:73709630-73709649 | None:intergenic | 15.0% |
| !!! | ATCAACTATTTATTTTTTTG+TGG | - | chr4.4:73708859-73708878 | None:intergenic | 15.0% |
| !!! | TTTATTTTTATGGTGATTTA+GGG | + | chr4.4:73709223-73709242 | MS.gene48807:intron | 15.0% |
| !!! | TTTTATTTTTATGGTGATTT+AGG | + | chr4.4:73709222-73709241 | MS.gene48807:intron | 15.0% |
| !! | AATATATACACATCATTAGA+AGG | - | chr4.4:73710072-73710091 | None:intergenic | 20.0% |
| !! | ATTTCGTTATGTAAAAGAAT+AGG | + | chr4.4:73709748-73709767 | MS.gene48807:intron | 20.0% |
| !! | GATATTGAATAATATATGCA+AGG | + | chr4.4:73708811-73708830 | MS.gene48807:intron | 20.0% |
| !! | TAAAGTTAATAAAAGGAAGT+TGG | + | chr4.4:73709532-73709551 | MS.gene48807:intron | 20.0% |
| !! | TTATTAAATGGTGATTATAC+TGG | + | chr4.4:73710610-73710629 | MS.gene48807:CDS | 20.0% |
| !!! | ATGATGTGTATATATTGATT+TGG | + | chr4.4:73710076-73710095 | MS.gene48807:intron | 20.0% |
| !!! | GTGATTGATAATTTGAAAAT+TGG | + | chr4.4:73708911-73708930 | MS.gene48807:intron | 20.0% |
| !!! | GTGATTGATAATTTGAAAAT+TGG | - | chr4.4:73708930-73708911 | None:intergenic | 20.0% |
| !!! | TTTAGTTTCTCATTTTGTTT+TGG | - | chr4.4:73708626-73708645 | None:intergenic | 20.0% |
| !!! | TTTTCTAACTTATCTTTACT+CGG | + | chr4.4:73709581-73709600 | MS.gene48807:intron | 20.0% |
| ! | AGGAACTGATTAAAAAGAAA+GGG | + | chr4.4:73710566-73710585 | MS.gene48807:CDS | 25.0% |
| ! | CAAATCAATCTCAAATGATA+AGG | + | chr4.4:73708789-73708808 | MS.gene48807:intron | 25.0% |
| ! | CAATTATATATGATGCAGTT+AGG | + | chr4.4:73710199-73710218 | MS.gene48807:intron | 25.0% |
| ! | CCAAATATAAATTCAACTAG+AGG | + | chr4.4:73709307-73709326 | MS.gene48807:CDS | 25.0% |
| ! | CCTCTAGTTGAATTTATATT+TGG | - | chr4.4:73709310-73709329 | None:intergenic | 25.0% |
| ! | TGAGAAACTAAAATAAGTAG+AGG | + | chr4.4:73708634-73708653 | MS.gene48807:intron | 25.0% |
| ! | TTTGATATATTCAAAGTTGG+TGG | - | chr4.4:73709627-73709646 | None:intergenic | 25.0% |
| !! | ATCTACCAATTTGCTTATAA+GGG | - | chr4.4:73708580-73708599 | None:intergenic | 25.0% |
| !! | CTTATCATTTGAGATTGATT+TGG | - | chr4.4:73708791-73708810 | None:intergenic | 25.0% |
| !! | GATATTGTTCTTTGAGTTAT+TGG | - | chr4.4:73710137-73710156 | None:intergenic | 25.0% |
| !! | TATCTACCAATTTGCTTATA+AGG | - | chr4.4:73708581-73708600 | None:intergenic | 25.0% |
| !!! | ATATTATTTAGGGTCTTGTT+AGG | - | chr4.4:73709921-73709940 | None:intergenic | 25.0% |
| !!! | TATTATTTAGGGTCTTGTTA+GGG | - | chr4.4:73709920-73709939 | None:intergenic | 25.0% |
| ACAAACCCTTATAAGCAAAT+TGG | + | chr4.4:73708572-73708591 | MS.gene48807:intron | 30.0% | |
| ATCAAAAATTTCGACAACCA+AGG | + | chr4.4:73710331-73710350 | MS.gene48807:CDS | 30.0% | |
| ATTTGATGTGTCATATTACC+AGG | + | chr4.4:73710546-73710565 | MS.gene48807:CDS | 30.0% | |
| CAGGAACTGATTAAAAAGAA+AGG | + | chr4.4:73710565-73710584 | MS.gene48807:CDS | 30.0% | |
| GAAATATTAAGCCACTTACT+GGG | + | chr4.4:73710707-73710726 | MS.gene48807:CDS | 30.0% | |
| GCGAAATCTATGATTAAGAT+GGG | + | chr4.4:73710685-73710704 | MS.gene48807:CDS | 30.0% | |
| TAAAACAGAATTAGTCAGCA+TGG | + | chr4.4:73709503-73709522 | MS.gene48807:intron | 30.0% | |
| TCGGATCAGGAATTATTAAA+TGG | + | chr4.4:73710598-73710617 | MS.gene48807:CDS | 30.0% | |
| TGAATAATATATGCAAGGTC+CGG | + | chr4.4:73708816-73708835 | MS.gene48807:intron | 30.0% | |
| TGCGAAATCTATGATTAAGA+TGG | + | chr4.4:73710684-73710703 | MS.gene48807:CDS | 30.0% | |
| TGTTCTTGTCATTGTAGATT+CGG | - | chr4.4:73710432-73710451 | None:intergenic | 30.0% | |
| TTATATATGATGCAGTTAGG+AGG | + | chr4.4:73710202-73710221 | MS.gene48807:intron | 30.0% | |
| ! | CTTTCTTTTTAATCAGTTCC+TGG | - | chr4.4:73710567-73710586 | None:intergenic | 30.0% |
| ! | GATCGTTGGTTAGAAAATAT+AGG | + | chr4.4:73710632-73710651 | MS.gene48807:CDS | 30.0% |
| ! | TAATAGTGCTCAAAGCATTA+GGG | - | chr4.4:73708352-73708371 | None:intergenic | 30.0% |
| ! | TATGACACATCAAATTTTGC+CGG | - | chr4.4:73710541-73710560 | None:intergenic | 30.0% |
| !!! | ATTTATTTTTTTGTGGTGCC+TGG | - | chr4.4:73708852-73708871 | None:intergenic | 30.0% |
| !!! | TTTATTTTTTTGTGGTGCCT+GGG | - | chr4.4:73708851-73708870 | None:intergenic | 30.0% |
| AAAGAAAGGGCTTCTTCATT+CGG | + | chr4.4:73710579-73710598 | MS.gene48807:CDS | 35.0% | |
| AATAATATATGCAAGGTCCG+GGG | + | chr4.4:73708818-73708837 | MS.gene48807:intron | 35.0% | |
| AGTTCAAAAAGAGAACCGTA+TGG | + | chr4.4:73708391-73708410 | MS.gene48807:CDS | 35.0% | |
| AGTTGAGAAAGACTGAATGA+TGG | - | chr4.4:73710310-73710329 | None:intergenic | 35.0% | |
| GAATAATATATGCAAGGTCC+GGG | + | chr4.4:73708817-73708836 | MS.gene48807:intron | 35.0% | |
| GCACAACAAATTATGTTCAC+TGG | + | chr4.4:73709983-73710002 | MS.gene48807:intron | 35.0% | |
| GGAAATATTAAGCCACTTAC+TGG | + | chr4.4:73710706-73710725 | MS.gene48807:CDS | 35.0% | |
| GTGAAATTCGTTCAAATTGC+AGG | + | chr4.4:73710737-73710756 | MS.gene48807:CDS | 35.0% | |
| GTTCAAAAAGAGAACCGTAT+GGG | + | chr4.4:73708392-73708411 | MS.gene48807:CDS | 35.0% | |
| TATCTATACACACACACACA+TGG | - | chr4.4:73708479-73708498 | None:intergenic | 35.0% | |
| TGTTTCTTGTGCAGACATAT+TGG | + | chr4.4:73709387-73709406 | MS.gene48807:CDS | 35.0% | |
| TTCAACTAGAGGATTTGAAG+TGG | + | chr4.4:73709318-73709337 | MS.gene48807:CDS | 35.0% | |
| TTGTGATGGTTCAATTCTTC+TGG | + | chr4.4:73709246-73709265 | MS.gene48807:CDS | 35.0% | |
| ! | CTAATAGTGCTCAAAGCATT+AGG | - | chr4.4:73708353-73708372 | None:intergenic | 35.0% |
| !! | TGAAGTGGTTGATGAGATTA+AGG | + | chr4.4:73709333-73709352 | MS.gene48807:CDS | 35.0% |
| !!! | TGCATTTTTTTCACTGTCCA+TGG | - | chr4.4:73709284-73709303 | None:intergenic | 35.0% |
| !!! | TTTTTTTCACTGTCCATGGA+AGG | - | chr4.4:73709280-73709299 | None:intergenic | 35.0% |
| AAACAATGTCCTCAGGGTAT+TGG | + | chr4.4:73709779-73709798 | MS.gene48807:intron | 40.0% | |
| AACGCTAAACAATGTCCTCA+GGG | + | chr4.4:73709773-73709792 | MS.gene48807:intron | 40.0% | |
| AATAGTGTGTGCTCCAGATA+GGG | - | chr4.4:73710380-73710399 | None:intergenic | 40.0% | |
| AGAAAGACTGAATGATGGTC+CGG | - | chr4.4:73710305-73710324 | None:intergenic | 40.0% | |
| ATGTCTGCACAAGAAACAAC+TGG | - | chr4.4:73709385-73709404 | None:intergenic | 40.0% | |
| ATTGCTTAACCAATACCCTG+AGG | - | chr4.4:73709791-73709810 | None:intergenic | 40.0% | |
| CAAGACATTTGTCCTAGAGA+AGG | + | chr4.4:73710478-73710497 | MS.gene48807:CDS | 40.0% | |
| TCAAGACCAACAAACATGCA+TGG | - | chr4.4:73710047-73710066 | None:intergenic | 40.0% | |
| TGGTGATTATACTGGATCGT+TGG | + | chr4.4:73710618-73710637 | MS.gene48807:CDS | 40.0% | |
| ! | ATGGAGTGTCTCTAACTAGT+TGG | - | chr4.4:73710028-73710047 | None:intergenic | 40.0% |
| ! | ATGGTGATTTAGGGTTGTGA+TGG | + | chr4.4:73709232-73709251 | MS.gene48807:intron | 40.0% |
| ! | GAAGCTGTTGATAAAGCATG+TGG | + | chr4.4:73709355-73709374 | MS.gene48807:CDS | 40.0% |
| !! | CAACGAGGTCTTTTTCGTTT+AGG | - | chr4.4:73710357-73710376 | None:intergenic | 40.0% |
| AAAGACTGAATGATGGTCCG+GGG | - | chr4.4:73710303-73710322 | None:intergenic | 45.0% | |
| CAAAAAGAGAACCGTATGGG+TGG | + | chr4.4:73708395-73708414 | MS.gene48807:CDS | 45.0% | |
| CAATAGTGTGTGCTCCAGAT+AGG | - | chr4.4:73710381-73710400 | None:intergenic | 45.0% | |
| CCTAGTTGCACTTTCCATGA+TGG | - | chr4.4:73710229-73710248 | None:intergenic | 45.0% | |
| GAAAGACTGAATGATGGTCC+GGG | - | chr4.4:73710304-73710323 | None:intergenic | 45.0% | |
| GAACGCTAAACAATGTCCTC+AGG | + | chr4.4:73709772-73709791 | MS.gene48807:intron | 45.0% | |
| GACACTCCATGCATGTTTGT+TGG | + | chr4.4:73710038-73710057 | MS.gene48807:intron | 45.0% | |
| GACATTTGTCCTAGAGAAGG+AGG | + | chr4.4:73710481-73710500 | MS.gene48807:CDS | 45.0% | |
| GAGATGCTAACACTATTGCG+AGG | - | chr4.4:73708277-73708296 | None:intergenic | 45.0% | |
| GTAGTAAAGAGCCACCCATA+CGG | - | chr4.4:73708409-73708428 | None:intergenic | 45.0% | |
| ! | CCATCATGGAAAGTGCAACT+AGG | + | chr4.4:73710226-73710245 | MS.gene48807:CDS | 45.0% |
| ! | CTATCTGGAGCACACACTAT+TGG | + | chr4.4:73710379-73710398 | MS.gene48807:CDS | 45.0% |
| ! | TAACACAGTCTAGAGCTGCA+AGG | - | chr4.4:73710516-73710535 | None:intergenic | 45.0% |
| !! | AGCTCTAGACTGTGTTACAC+CGG | + | chr4.4:73710519-73710538 | MS.gene48807:CDS | 45.0% |
| !! | GGTCTTTTTCGTTTAGGCCT+TGG | - | chr4.4:73710351-73710370 | None:intergenic | 45.0% |
| !!! | TGTTTTTATTTTTATTTTTA+TGG | + | chr4.4:73709213-73709232 | MS.gene48807:intron | 5.0% |
| AAAGACCTCGTTGCCCTATC+TGG | + | chr4.4:73710364-73710383 | MS.gene48807:CDS | 50.0% | |
| AAGCCACTTACTGGGAGTCA+AGG | + | chr4.4:73710715-73710734 | MS.gene48807:CDS | 50.0% | |
| AGGGCTTCTTCATTCGGATC+AGG | + | chr4.4:73710585-73710604 | MS.gene48807:CDS | 50.0% | |
| GATGTTGCCTGAATCTGCAG+CGG | - | chr4.4:73710281-73710300 | None:intergenic | 50.0% | |
| TCACCTTGACTCCCAGTAAG+TGG | - | chr4.4:73710721-73710740 | None:intergenic | 50.0% | |
| TCTGGACTCTACACCTTCCA+TGG | + | chr4.4:73709264-73709283 | MS.gene48807:CDS | 50.0% | |
| TGCAAGAGACTCTGTCGTTG+CGG | + | chr4.4:73709417-73709436 | MS.gene48807:CDS | 50.0% | |
| TGCAGTTAGGAGGACCATCA+TGG | + | chr4.4:73710212-73710231 | MS.gene48807:intron | 50.0% | |
| TTGGAGTCTCCTCCTTCTCT+AGG | - | chr4.4:73710493-73710512 | None:intergenic | 50.0% | |
| ! | ACAGTCTAGAGCTGCAAGGT+TGG | - | chr4.4:73710512-73710531 | None:intergenic | 50.0% |
| GCAGATTCAGGCAACATCCC+CGG | + | chr4.4:73710283-73710302 | MS.gene48807:CDS | 55.0% | |
| GTGCTCCAGATAGGGCAACG+AGG | - | chr4.4:73710372-73710391 | None:intergenic | 60.0% | |
| ! | AGTCGTGCCGCTGCAGATTC+AGG | + | chr4.4:73710271-73710290 | MS.gene48807:CDS | 60.0% |
| AGGTCCGGGGTTCGAATCCC+AGG | + | chr4.4:73708831-73708850 | MS.gene48807:intron | 65.0% | |
| GGTGCCTGGGATTCGAACCC+CGG | - | chr4.4:73708838-73708857 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 73708266 | 73710771 | 73708266 | ID=MS.gene48807 |
| chr4.4 | mRNA | 73708266 | 73710771 | 73708266 | ID=MS.gene48807.t1;Parent=MS.gene48807 |
| chr4.4 | exon | 73708266 | 73708457 | 73708266 | ID=MS.gene48807.t1.exon1;Parent=MS.gene48807.t1 |
| chr4.4 | CDS | 73708266 | 73708457 | 73708266 | ID=cds.MS.gene48807.t1;Parent=MS.gene48807.t1 |
| chr4.4 | exon | 73709244 | 73709438 | 73709244 | ID=MS.gene48807.t1.exon2;Parent=MS.gene48807.t1 |
| chr4.4 | CDS | 73709244 | 73709438 | 73709244 | ID=cds.MS.gene48807.t1;Parent=MS.gene48807.t1 |
| chr4.4 | exon | 73710217 | 73710771 | 73710217 | ID=MS.gene48807.t1.exon3;Parent=MS.gene48807.t1 |
| chr4.4 | CDS | 73710217 | 73710771 | 73710217 | ID=cds.MS.gene48807.t1;Parent=MS.gene48807.t1 |
| Gene Sequence |
| Protein sequence |
