Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77033.t1 | XP_013455188.1 | 93.6 | 236 | 15 | 0 | 1 | 236 | 86 | 321 | 6.80E-121 | 443.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77033.t1 | Q9FLC0 | 62.1 | 235 | 85 | 3 | 4 | 236 | 92 | 324 | 4.2e-71 | 269.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77033.t1 | A0A072UIE4 | 93.6 | 236 | 15 | 0 | 1 | 236 | 86 | 321 | 4.9e-121 | 443.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene77033 | -0.812663 | 3.79E-51 | -1.69E-46 |
| MS.gene04926 | MS.gene77033 | 0.806287 | 8.85E-50 | -1.69E-46 |
| MS.gene04932 | MS.gene77033 | 0.80296 | 4.38E-49 | -1.69E-46 |
| MS.gene049549 | MS.gene77033 | 0.830365 | 3.06E-55 | -1.69E-46 |
| MS.gene049611 | MS.gene77033 | 0.821604 | 3.70E-53 | -1.69E-46 |
| MS.gene049634 | MS.gene77033 | 0.824283 | 8.78E-54 | -1.69E-46 |
| MS.gene050095 | MS.gene77033 | 0.824372 | 8.37E-54 | -1.69E-46 |
| MS.gene050096 | MS.gene77033 | 0.823902 | 1.08E-53 | -1.69E-46 |
| MS.gene050380 | MS.gene77033 | 0.822203 | 2.69E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene77033 | 0.830436 | 2.94E-55 | -1.69E-46 |
| MS.gene050647 | MS.gene77033 | 0.839854 | 1.24E-57 | -1.69E-46 |
| MS.gene050720 | MS.gene77033 | 0.819235 | 1.29E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene77033 | -0.810092 | 1.37E-50 | -1.69E-46 |
| MS.gene050809 | MS.gene77033 | 0.80626 | 8.97E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene77033 | -0.80204 | 6.77E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene77033 | 0.834833 | 2.38E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene77033 | 0.836674 | 8.15E-57 | -1.69E-46 |
| MS.gene051158 | MS.gene77033 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene051385 | MS.gene77033 | 0.827543 | 1.48E-54 | -1.69E-46 |
| MS.gene051632 | MS.gene77033 | 0.807077 | 6.03E-50 | -1.69E-46 |
| MS.gene051996 | MS.gene77033 | 0.809332 | 1.99E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene77033 | -0.806982 | 6.31E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene77033 | 0.834833 | 2.38E-56 | -1.69E-46 |
| MS.gene05240 | MS.gene77033 | 0.869054 | 4.13E-66 | -1.69E-46 |
| MS.gene05244 | MS.gene77033 | 0.873025 | 2.02E-67 | -1.69E-46 |
| MS.gene052606 | MS.gene77033 | 0.822566 | 2.21E-53 | -1.69E-46 |
| MS.gene053030 | MS.gene77033 | 0.801597 | 8.35E-49 | -1.69E-46 |
| MS.gene053031 | MS.gene77033 | 0.876145 | 1.76E-68 | -1.69E-46 |
| MS.gene053033 | MS.gene77033 | 0.853001 | 3.19E-61 | -1.69E-46 |
| MS.gene053403 | MS.gene77033 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene77033 | 0.864059 | 1.60E-64 | -1.69E-46 |
| MS.gene053420 | MS.gene77033 | 0.829803 | 4.20E-55 | -1.69E-46 |
| MS.gene054146 | MS.gene77033 | 0.821607 | 3.69E-53 | -1.69E-46 |
| MS.gene054147 | MS.gene77033 | 0.811407 | 7.11E-51 | -1.69E-46 |
| MS.gene054181 | MS.gene77033 | 0.826472 | 2.66E-54 | -1.69E-46 |
| MS.gene054290 | MS.gene77033 | 0.808741 | 2.67E-50 | -1.69E-46 |
| MS.gene054421 | MS.gene77033 | 0.811601 | 6.45E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene77033 | -0.806162 | 9.40E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene77033 | 0.85418 | 1.46E-61 | -1.69E-46 |
| MS.gene05483 | MS.gene77033 | 0.806871 | 6.67E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene77033 | 0.817471 | 3.24E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene77033 | 0.820053 | 8.40E-53 | -1.69E-46 |
| MS.gene055158 | MS.gene77033 | 0.81185 | 5.69E-51 | -1.69E-46 |
| MS.gene055202 | MS.gene77033 | 0.815314 | 9.85E-52 | -1.69E-46 |
| MS.gene055240 | MS.gene77033 | 0.830766 | 2.44E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene77033 | -0.800498 | 1.40E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene77033 | -0.809861 | 1.54E-50 | -1.69E-46 |
| MS.gene055959 | MS.gene77033 | 0.822398 | 2.42E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene77033 | 0.802267 | 6.08E-49 | -1.69E-46 |
| MS.gene056218 | MS.gene77033 | 0.81925 | 1.28E-52 | -1.69E-46 |
| MS.gene056359 | MS.gene77033 | 0.802002 | 6.90E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene77033 | 0.823128 | 1.64E-53 | -1.69E-46 |
| MS.gene056591 | MS.gene77033 | 0.823299 | 1.49E-53 | -1.69E-46 |
| MS.gene056748 | MS.gene77033 | 0.817582 | 3.06E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene77033 | 0.841195 | 5.51E-58 | -1.69E-46 |
| MS.gene056920 | MS.gene77033 | 0.827624 | 1.41E-54 | -1.69E-46 |
| MS.gene057261 | MS.gene77033 | 0.817132 | 3.86E-52 | -1.69E-46 |
| MS.gene057544 | MS.gene77033 | 0.837286 | 5.69E-57 | -1.69E-46 |
| MS.gene057547 | MS.gene77033 | 0.807869 | 4.09E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene77033 | 0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene77033 | 0.833361 | 5.57E-56 | -1.69E-46 |
| MS.gene058171 | MS.gene77033 | 0.820539 | 6.50E-53 | -1.69E-46 |
| MS.gene058173 | MS.gene77033 | 0.811658 | 6.27E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene77033 | 0.820565 | 6.41E-53 | -1.69E-46 |
| MS.gene058177 | MS.gene77033 | 0.806347 | 8.60E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene77033 | -0.815329 | 9.78E-52 | -1.69E-46 |
| MS.gene058603 | MS.gene77033 | 0.830397 | 3.01E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene77033 | -0.812384 | 4.36E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene77033 | 0.808429 | 3.11E-50 | -1.69E-46 |
| MS.gene059037 | MS.gene77033 | 0.806434 | 8.24E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene77033 | 0.817501 | 3.19E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene77033 | 0.806901 | 6.57E-50 | -1.69E-46 |
| MS.gene059944 | MS.gene77033 | 0.822962 | 1.79E-53 | -1.69E-46 |
| MS.gene059953 | MS.gene77033 | 0.813026 | 3.15E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene77033 | 0.833941 | 3.99E-56 | -1.69E-46 |
| MS.gene060087 | MS.gene77033 | 0.822543 | 2.24E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene77033 | -0.801815 | 7.54E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77033.t1 | MTR_4g029170 | 93.644 | 236 | 15 | 0 | 1 | 236 | 86 | 321 | 7.04e-165 | 458 |
| MS.gene77033.t1 | MTR_4g029180 | 86.441 | 236 | 32 | 0 | 1 | 236 | 86 | 321 | 8.67e-152 | 425 |
| MS.gene77033.t1 | MTR_5g074860 | 62.288 | 236 | 83 | 4 | 4 | 235 | 91 | 324 | 1.37e-98 | 290 |
| MS.gene77033.t1 | MTR_5g074740 | 62.869 | 237 | 82 | 4 | 4 | 236 | 87 | 321 | 9.75e-98 | 288 |
| MS.gene77033.t1 | MTR_5g074710 | 62.869 | 237 | 82 | 4 | 4 | 236 | 87 | 321 | 1.11e-97 | 288 |
| MS.gene77033.t1 | MTR_5g074760 | 61.603 | 237 | 85 | 4 | 4 | 236 | 87 | 321 | 5.51e-96 | 283 |
| MS.gene77033.t1 | MTR_5g074970 | 62.288 | 236 | 85 | 2 | 4 | 236 | 92 | 326 | 3.48e-95 | 281 |
| MS.gene77033.t1 | MTR_3g072190 | 60.515 | 233 | 90 | 2 | 4 | 236 | 21 | 251 | 3.26e-94 | 276 |
| MS.gene77033.t1 | MTR_3g072190 | 60.515 | 233 | 90 | 2 | 4 | 236 | 88 | 318 | 3.37e-93 | 276 |
| MS.gene77033.t1 | MTR_3g094650 | 58.723 | 235 | 93 | 3 | 4 | 236 | 90 | 322 | 5.71e-92 | 273 |
| MS.gene77033.t1 | MTR_3g466200 | 59.574 | 235 | 92 | 2 | 4 | 236 | 87 | 320 | 7.12e-92 | 273 |
| MS.gene77033.t1 | MTR_5g083860 | 58.298 | 235 | 94 | 3 | 4 | 236 | 93 | 325 | 2.30e-91 | 272 |
| MS.gene77033.t1 | MTR_3g467600 | 59.494 | 237 | 91 | 3 | 4 | 236 | 89 | 324 | 2.50e-90 | 269 |
| MS.gene77033.t1 | MTR_4g029200 | 57.082 | 233 | 98 | 2 | 4 | 236 | 108 | 338 | 2.48e-88 | 265 |
| MS.gene77033.t1 | MTR_2g084000 | 57.692 | 234 | 96 | 3 | 4 | 236 | 88 | 319 | 5.35e-88 | 263 |
| MS.gene77033.t1 | MTR_2g084020 | 57.692 | 234 | 96 | 3 | 4 | 236 | 87 | 318 | 6.24e-88 | 263 |
| MS.gene77033.t1 | MTR_7g072510 | 56.652 | 233 | 99 | 2 | 4 | 236 | 82 | 312 | 6.42e-88 | 263 |
| MS.gene77033.t1 | MTR_7g072480 | 57.082 | 233 | 98 | 2 | 4 | 236 | 86 | 316 | 2.95e-86 | 258 |
| MS.gene77033.t1 | MTR_2g084080 | 54.936 | 233 | 103 | 2 | 4 | 236 | 87 | 317 | 2.34e-85 | 256 |
| MS.gene77033.t1 | MTR_2g084110 | 54.936 | 233 | 103 | 2 | 4 | 236 | 87 | 317 | 5.46e-85 | 255 |
| MS.gene77033.t1 | MTR_2g084010 | 55.983 | 234 | 100 | 3 | 4 | 236 | 87 | 318 | 7.89e-85 | 255 |
| MS.gene77033.t1 | MTR_3g094670 | 58.298 | 235 | 94 | 3 | 4 | 236 | 90 | 322 | 1.83e-84 | 254 |
| MS.gene77033.t1 | MTR_4g029190 | 55.745 | 235 | 100 | 3 | 4 | 236 | 108 | 340 | 1.97e-84 | 255 |
| MS.gene77033.t1 | MTR_5g021060 | 54.959 | 242 | 99 | 4 | 3 | 236 | 91 | 330 | 1.61e-82 | 249 |
| MS.gene77033.t1 | MTR_3g094630 | 59.149 | 235 | 92 | 3 | 4 | 236 | 90 | 322 | 1.77e-82 | 249 |
| MS.gene77033.t1 | MTR_2g084090 | 54.274 | 234 | 104 | 3 | 4 | 236 | 87 | 318 | 1.97e-82 | 249 |
| MS.gene77033.t1 | MTR_3g466180 | 56.223 | 233 | 100 | 2 | 4 | 236 | 93 | 323 | 4.43e-80 | 243 |
| MS.gene77033.t1 | MTR_4g083710 | 53.942 | 241 | 104 | 5 | 1 | 236 | 86 | 324 | 1.46e-79 | 242 |
| MS.gene77033.t1 | MTR_8g076820 | 53.719 | 242 | 102 | 4 | 3 | 236 | 91 | 330 | 4.70e-79 | 241 |
| MS.gene77033.t1 | MTR_5g074700 | 54.783 | 230 | 84 | 5 | 11 | 236 | 1 | 214 | 4.92e-78 | 234 |
| MS.gene77033.t1 | MTR_7g026990 | 53.648 | 233 | 105 | 3 | 4 | 236 | 93 | 322 | 5.54e-77 | 235 |
| MS.gene77033.t1 | MTR_1g115900 | 50.424 | 236 | 111 | 4 | 4 | 236 | 89 | 321 | 3.16e-76 | 233 |
| MS.gene77033.t1 | MTR_1g022970 | 51.440 | 243 | 107 | 4 | 3 | 236 | 107 | 347 | 1.35e-74 | 230 |
| MS.gene77033.t1 | MTR_4g074995 | 51.037 | 241 | 98 | 5 | 1 | 236 | 83 | 308 | 7.63e-74 | 227 |
| MS.gene77033.t1 | MTR_2g028980 | 52.459 | 244 | 103 | 5 | 3 | 236 | 90 | 330 | 4.60e-73 | 226 |
| MS.gene77033.t1 | MTR_5g014100 | 50.400 | 250 | 107 | 5 | 1 | 236 | 85 | 331 | 6.26e-73 | 225 |
| MS.gene77033.t1 | MTR_2g029800 | 49.794 | 243 | 111 | 4 | 3 | 236 | 90 | 330 | 3.68e-71 | 221 |
| MS.gene77033.t1 | MTR_4g125940 | 49.593 | 246 | 111 | 4 | 2 | 236 | 31 | 274 | 7.79e-71 | 218 |
| MS.gene77033.t1 | MTR_1g054205 | 47.737 | 243 | 116 | 4 | 3 | 236 | 86 | 326 | 8.81e-71 | 219 |
| MS.gene77033.t1 | MTR_2g029750 | 50.206 | 243 | 110 | 4 | 3 | 236 | 90 | 330 | 1.39e-70 | 220 |
| MS.gene77033.t1 | MTR_2g029830 | 49.383 | 243 | 112 | 4 | 3 | 236 | 21 | 261 | 1.46e-70 | 218 |
| MS.gene77033.t1 | MTR_4g074990 | 50.833 | 240 | 97 | 5 | 1 | 236 | 83 | 305 | 1.75e-70 | 218 |
| MS.gene77033.t1 | MTR_4g122640 | 48.117 | 239 | 116 | 4 | 4 | 236 | 100 | 336 | 3.66e-70 | 218 |
| MS.gene77033.t1 | MTR_2g029860 | 48.148 | 243 | 115 | 4 | 3 | 236 | 90 | 330 | 4.79e-70 | 218 |
| MS.gene77033.t1 | MTR_2g029815 | 50.206 | 243 | 110 | 4 | 3 | 236 | 90 | 330 | 5.47e-70 | 218 |
| MS.gene77033.t1 | MTR_4g125940 | 49.593 | 246 | 111 | 4 | 2 | 236 | 86 | 329 | 5.64e-70 | 218 |
| MS.gene77033.t1 | MTR_7g093370 | 47.737 | 243 | 116 | 4 | 3 | 236 | 131 | 371 | 7.59e-70 | 218 |
| MS.gene77033.t1 | MTR_2g029830 | 49.383 | 243 | 112 | 4 | 3 | 236 | 89 | 329 | 1.01e-69 | 218 |
| MS.gene77033.t1 | MTR_5g074860 | 50.424 | 236 | 72 | 5 | 4 | 235 | 91 | 285 | 1.10e-68 | 213 |
| MS.gene77033.t1 | MTR_2g029740 | 48.560 | 243 | 114 | 4 | 3 | 236 | 90 | 330 | 1.76e-68 | 214 |
| MS.gene77033.t1 | MTR_2g029560 | 47.131 | 244 | 116 | 5 | 3 | 236 | 85 | 325 | 3.42e-68 | 213 |
| MS.gene77033.t1 | MTR_2g029850 | 48.980 | 245 | 114 | 4 | 1 | 236 | 88 | 330 | 5.04e-68 | 213 |
| MS.gene77033.t1 | MTR_2g040000 | 46.559 | 247 | 118 | 4 | 2 | 236 | 87 | 331 | 5.42e-68 | 213 |
| MS.gene77033.t1 | MTR_2g029820 | 48.971 | 243 | 113 | 4 | 3 | 236 | 90 | 330 | 1.60e-67 | 212 |
| MS.gene77033.t1 | MTR_3g072210 | 56.989 | 186 | 77 | 3 | 53 | 236 | 54 | 238 | 1.76e-66 | 206 |
| MS.gene77033.t1 | MTR_5g017850 | 45.492 | 244 | 122 | 4 | 1 | 236 | 86 | 326 | 2.95e-66 | 208 |
| MS.gene77033.t1 | MTR_5g017860 | 45.492 | 244 | 122 | 4 | 1 | 236 | 86 | 326 | 1.12e-65 | 206 |
| MS.gene77033.t1 | MTR_5g049280 | 46.774 | 248 | 118 | 7 | 1 | 236 | 92 | 337 | 2.19e-65 | 206 |
| MS.gene77033.t1 | MTR_2g029910 | 47.541 | 244 | 116 | 5 | 3 | 236 | 91 | 332 | 4.79e-65 | 206 |
| MS.gene77033.t1 | MTR_7g029030 | 43.933 | 239 | 128 | 4 | 2 | 236 | 84 | 320 | 1.23e-61 | 196 |
| MS.gene77033.t1 | MTR_2g029730 | 46.311 | 244 | 118 | 5 | 3 | 236 | 86 | 326 | 7.66e-61 | 194 |
| MS.gene77033.t1 | MTR_2g088770 | 44.033 | 243 | 124 | 6 | 3 | 236 | 86 | 325 | 5.65e-60 | 192 |
| MS.gene77033.t1 | MTR_4g030890 | 46.721 | 244 | 116 | 6 | 1 | 236 | 159 | 396 | 9.27e-60 | 194 |
| MS.gene77033.t1 | MTR_4g074980 | 45.148 | 237 | 103 | 7 | 1 | 236 | 84 | 294 | 1.31e-59 | 190 |
| MS.gene77033.t1 | MTR_2g008730 | 44.082 | 245 | 122 | 5 | 3 | 236 | 61 | 301 | 9.96e-58 | 185 |
| MS.gene77033.t1 | MTR_2g008710 | 43.673 | 245 | 123 | 5 | 3 | 236 | 85 | 325 | 1.64e-57 | 185 |
| MS.gene77033.t1 | MTR_1g101830 | 43.210 | 243 | 121 | 8 | 3 | 236 | 88 | 322 | 2.16e-57 | 185 |
| MS.gene77033.t1 | MTR_5g022870 | 42.324 | 241 | 124 | 6 | 3 | 236 | 84 | 316 | 4.58e-57 | 184 |
| MS.gene77033.t1 | MTR_4g031140 | 43.852 | 244 | 123 | 6 | 1 | 236 | 87 | 324 | 1.87e-56 | 183 |
| MS.gene77033.t1 | MTR_3g092990 | 41.736 | 242 | 131 | 4 | 3 | 236 | 76 | 315 | 2.41e-56 | 182 |
| MS.gene77033.t1 | MTR_8g075100 | 41.909 | 241 | 125 | 6 | 3 | 236 | 87 | 319 | 2.98e-56 | 182 |
| MS.gene77033.t1 | MTR_3g092990 | 41.736 | 242 | 131 | 4 | 3 | 236 | 87 | 326 | 4.24e-56 | 182 |
| MS.gene77033.t1 | MTR_4g046713 | 40.909 | 242 | 132 | 5 | 3 | 236 | 88 | 326 | 2.72e-55 | 180 |
| MS.gene77033.t1 | MTR_0155s0040 | 40.000 | 235 | 133 | 6 | 3 | 236 | 88 | 315 | 2.96e-55 | 179 |
| MS.gene77033.t1 | MTR_1g077000 | 41.277 | 235 | 130 | 6 | 3 | 236 | 100 | 327 | 2.33e-54 | 177 |
| MS.gene77033.t1 | MTR_4g074980 | 52.907 | 172 | 75 | 4 | 1 | 168 | 84 | 253 | 8.30e-54 | 174 |
| MS.gene77033.t1 | MTR_1g009750 | 42.609 | 230 | 121 | 5 | 16 | 236 | 101 | 328 | 9.89e-54 | 176 |
| MS.gene77033.t1 | MTR_1g086320 | 42.915 | 247 | 128 | 5 | 1 | 236 | 89 | 333 | 1.55e-53 | 175 |
| MS.gene77033.t1 | MTR_4g087965 | 44.167 | 240 | 122 | 6 | 3 | 232 | 105 | 342 | 2.05e-53 | 176 |
| MS.gene77033.t1 | MTR_1g090760 | 39.918 | 243 | 135 | 5 | 3 | 236 | 90 | 330 | 1.12e-51 | 171 |
| MS.gene77033.t1 | MTR_1g025980 | 41.772 | 237 | 124 | 5 | 3 | 232 | 85 | 314 | 1.94e-51 | 169 |
| MS.gene77033.t1 | MTR_4g133800 | 39.256 | 242 | 132 | 6 | 3 | 236 | 99 | 333 | 1.91e-50 | 167 |
| MS.gene77033.t1 | MTR_1g086490 | 41.897 | 253 | 125 | 6 | 3 | 236 | 91 | 340 | 5.65e-50 | 166 |
| MS.gene77033.t1 | MTR_7g086870 | 38.559 | 236 | 138 | 5 | 2 | 236 | 82 | 311 | 6.01e-50 | 166 |
| MS.gene77033.t1 | MTR_2g437770 | 43.534 | 232 | 116 | 6 | 13 | 236 | 117 | 341 | 1.42e-49 | 166 |
| MS.gene77033.t1 | MTR_4g114210 | 40.244 | 246 | 131 | 5 | 3 | 236 | 79 | 320 | 6.80e-49 | 163 |
| MS.gene77033.t1 | MTR_4g127670 | 40.870 | 230 | 125 | 4 | 16 | 236 | 96 | 323 | 1.34e-48 | 162 |
| MS.gene77033.t1 | MTR_1g038680 | 39.754 | 244 | 135 | 5 | 3 | 236 | 91 | 332 | 2.28e-48 | 162 |
| MS.gene77033.t1 | MTR_6g043280 | 40.541 | 222 | 127 | 4 | 16 | 236 | 115 | 332 | 4.55e-48 | 161 |
| MS.gene77033.t1 | MTR_7g072490 | 43.805 | 226 | 71 | 5 | 4 | 229 | 18 | 187 | 3.58e-47 | 155 |
| MS.gene77033.t1 | MTR_2g077990 | 38.433 | 268 | 125 | 7 | 4 | 234 | 140 | 404 | 4.71e-47 | 160 |
| MS.gene77033.t1 | MTR_7g107520 | 39.004 | 241 | 134 | 6 | 3 | 236 | 86 | 320 | 6.97e-47 | 158 |
| MS.gene77033.t1 | MTR_2g078610 | 38.060 | 268 | 126 | 7 | 4 | 234 | 140 | 404 | 7.34e-47 | 160 |
| MS.gene77033.t1 | MTR_8g062780 | 37.860 | 243 | 140 | 5 | 3 | 236 | 84 | 324 | 8.32e-47 | 158 |
| MS.gene77033.t1 | MTR_6g043460 | 38.819 | 237 | 139 | 5 | 2 | 236 | 96 | 328 | 2.04e-46 | 157 |
| MS.gene77033.t1 | MTR_5g016010 | 38.158 | 228 | 126 | 4 | 16 | 232 | 102 | 325 | 2.81e-46 | 156 |
| MS.gene77033.t1 | MTR_6g027440 | 36.402 | 239 | 141 | 6 | 3 | 236 | 82 | 314 | 4.33e-46 | 155 |
| MS.gene77033.t1 | MTR_0286s0010 | 36.726 | 226 | 135 | 4 | 17 | 236 | 111 | 334 | 7.30e-46 | 155 |
| MS.gene77033.t1 | MTR_6g008075 | 36.726 | 226 | 135 | 4 | 17 | 236 | 111 | 334 | 7.30e-46 | 155 |
| MS.gene77033.t1 | MTR_4g095450 | 40.271 | 221 | 126 | 4 | 16 | 232 | 102 | 320 | 1.26e-45 | 155 |
| MS.gene77033.t1 | MTR_2g008160 | 38.618 | 246 | 136 | 5 | 2 | 236 | 82 | 323 | 3.53e-45 | 154 |
| MS.gene77033.t1 | MTR_2g099175 | 37.247 | 247 | 138 | 6 | 2 | 236 | 94 | 335 | 9.10e-45 | 153 |
| MS.gene77033.t1 | MTR_2g067440 | 37.778 | 270 | 126 | 8 | 4 | 235 | 121 | 386 | 1.01e-44 | 154 |
| MS.gene77033.t1 | MTR_7g086820 | 35.146 | 239 | 143 | 5 | 3 | 236 | 81 | 312 | 3.55e-44 | 150 |
| MS.gene77033.t1 | MTR_6g043240 | 37.946 | 224 | 134 | 4 | 14 | 236 | 112 | 331 | 5.70e-44 | 151 |
| MS.gene77033.t1 | MTR_1g009750 | 38.428 | 229 | 115 | 6 | 16 | 236 | 101 | 311 | 1.88e-43 | 149 |
| MS.gene77033.t1 | MTR_2g029880 | 42.708 | 192 | 88 | 5 | 55 | 236 | 9 | 188 | 4.47e-43 | 145 |
| MS.gene77033.t1 | MTR_4g132490 | 33.766 | 231 | 143 | 5 | 13 | 236 | 100 | 327 | 1.43e-40 | 142 |
| MS.gene77033.t1 | MTR_3g105790 | 37.344 | 241 | 140 | 3 | 5 | 236 | 8 | 246 | 2.71e-40 | 139 |
| MS.gene77033.t1 | MTR_2g078280 | 37.109 | 256 | 121 | 7 | 4 | 222 | 140 | 392 | 4.28e-40 | 142 |
| MS.gene77033.t1 | MTR_3g105790 | 37.344 | 241 | 140 | 3 | 5 | 236 | 84 | 322 | 2.57e-39 | 138 |
| MS.gene77033.t1 | MTR_1g066710 | 36.123 | 227 | 138 | 4 | 15 | 236 | 99 | 323 | 1.55e-38 | 136 |
| MS.gene77033.t1 | MTR_1g066380 | 34.802 | 227 | 141 | 4 | 15 | 236 | 31 | 255 | 6.16e-38 | 133 |
| MS.gene77033.t1 | MTR_1g066640 | 36.564 | 227 | 137 | 4 | 15 | 236 | 99 | 323 | 8.16e-38 | 134 |
| MS.gene77033.t1 | MTR_0147s0010 | 32.271 | 251 | 140 | 5 | 12 | 235 | 134 | 381 | 1.07e-37 | 135 |
| MS.gene77033.t1 | MTR_1g066380 | 34.802 | 227 | 141 | 4 | 15 | 236 | 99 | 323 | 4.12e-37 | 132 |
| MS.gene77033.t1 | MTR_1g066680 | 34.361 | 227 | 142 | 4 | 15 | 236 | 98 | 322 | 5.78e-37 | 132 |
| MS.gene77033.t1 | MTR_2g067450 | 36.929 | 241 | 138 | 7 | 4 | 235 | 74 | 309 | 6.75e-37 | 132 |
| MS.gene77033.t1 | MTR_4g132110 | 32.599 | 227 | 146 | 4 | 15 | 236 | 104 | 328 | 2.31e-35 | 128 |
| MS.gene77033.t1 | MTR_5g033470 | 30.328 | 244 | 157 | 5 | 4 | 236 | 136 | 377 | 8.95e-35 | 127 |
| MS.gene77033.t1 | MTR_4g132110 | 31.897 | 232 | 146 | 5 | 15 | 236 | 104 | 333 | 6.58e-33 | 122 |
| MS.gene77033.t1 | MTR_2g008160 | 34.454 | 238 | 118 | 5 | 4 | 236 | 84 | 288 | 7.38e-31 | 115 |
| MS.gene77033.t1 | MTR_2g078560 | 33.482 | 224 | 108 | 6 | 48 | 232 | 95 | 316 | 9.12e-31 | 116 |
| MS.gene77033.t1 | MTR_2g077980 | 32.971 | 276 | 136 | 9 | 4 | 234 | 11 | 282 | 1.66e-30 | 114 |
| MS.gene77033.t1 | MTR_3g462850 | 43.262 | 141 | 68 | 5 | 108 | 236 | 9 | 149 | 7.44e-27 | 101 |
| MS.gene77033.t1 | MTR_5g058120 | 36.364 | 154 | 94 | 2 | 79 | 232 | 6 | 155 | 1.68e-24 | 98.2 |
| MS.gene77033.t1 | MTR_5g074770 | 49.462 | 93 | 44 | 2 | 145 | 235 | 17 | 108 | 5.95e-23 | 90.1 |
| MS.gene77033.t1 | MTR_2g008160 | 42.982 | 114 | 61 | 3 | 2 | 115 | 82 | 191 | 4.46e-21 | 87.8 |
| MS.gene77033.t1 | MTR_7g086790 | 37.963 | 108 | 61 | 3 | 3 | 110 | 31 | 132 | 1.43e-16 | 75.5 |
| MS.gene77033.t1 | MTR_1g098320 | 41.026 | 78 | 46 | 0 | 159 | 236 | 47 | 124 | 4.83e-15 | 70.1 |
| MS.gene77033.t1 | MTR_3g107060 | 28.646 | 192 | 84 | 5 | 36 | 217 | 164 | 312 | 1.84e-14 | 71.6 |
| MS.gene77033.t1 | MTR_3g088160 | 29.949 | 197 | 115 | 7 | 28 | 218 | 175 | 354 | 4.54e-13 | 68.2 |
| MS.gene77033.t1 | MTR_3g088160 | 29.949 | 197 | 115 | 7 | 28 | 218 | 175 | 354 | 5.53e-13 | 67.8 |
| MS.gene77033.t1 | MTR_3g072260 | 70.833 | 48 | 13 | 1 | 4 | 51 | 88 | 134 | 2.28e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77033.t1 | AT5G05340 | 62.128 | 235 | 85 | 3 | 4 | 236 | 92 | 324 | 2.84e-95 | 282 |
| MS.gene77033.t1 | AT5G58390 | 56.170 | 235 | 100 | 2 | 4 | 236 | 83 | 316 | 5.82e-86 | 258 |
| MS.gene77033.t1 | AT5G58400 | 54.468 | 235 | 104 | 2 | 4 | 236 | 92 | 325 | 6.90e-84 | 253 |
| MS.gene77033.t1 | AT2G18150 | 52.066 | 242 | 106 | 4 | 3 | 236 | 97 | 336 | 1.65e-81 | 247 |
| MS.gene77033.t1 | AT4G36430 | 52.066 | 242 | 106 | 4 | 3 | 236 | 91 | 330 | 1.73e-81 | 247 |
| MS.gene77033.t1 | AT1G14550 | 54.622 | 238 | 105 | 3 | 1 | 236 | 85 | 321 | 3.36e-81 | 246 |
| MS.gene77033.t1 | AT2G18140 | 52.066 | 242 | 106 | 4 | 3 | 236 | 96 | 335 | 1.09e-78 | 240 |
| MS.gene77033.t1 | AT3G50990 | 50.410 | 244 | 111 | 4 | 1 | 236 | 100 | 341 | 3.51e-77 | 236 |
| MS.gene77033.t1 | AT5G66390 | 50.000 | 242 | 111 | 4 | 3 | 236 | 94 | 333 | 2.06e-75 | 231 |
| MS.gene77033.t1 | AT1G44970 | 50.206 | 243 | 110 | 4 | 3 | 236 | 106 | 346 | 4.65e-75 | 231 |
| MS.gene77033.t1 | AT1G14540 | 52.101 | 238 | 110 | 4 | 1 | 236 | 80 | 315 | 1.29e-73 | 226 |
| MS.gene77033.t1 | AT5G06720 | 48.571 | 245 | 115 | 4 | 1 | 236 | 91 | 333 | 1.52e-71 | 222 |
| MS.gene77033.t1 | AT2G35380 | 49.799 | 249 | 110 | 5 | 1 | 236 | 1 | 247 | 2.62e-71 | 218 |
| MS.gene77033.t1 | AT2G35380 | 49.799 | 249 | 110 | 5 | 1 | 236 | 89 | 335 | 3.09e-70 | 218 |
| MS.gene77033.t1 | AT3G32980 | 47.347 | 245 | 116 | 5 | 3 | 236 | 92 | 334 | 6.61e-69 | 216 |
| MS.gene77033.t1 | AT1G49570 | 48.536 | 239 | 111 | 5 | 4 | 232 | 110 | 346 | 1.62e-68 | 214 |
| MS.gene77033.t1 | AT3G49110 | 48.163 | 245 | 114 | 5 | 3 | 236 | 94 | 336 | 3.43e-68 | 214 |
| MS.gene77033.t1 | AT4G08770 | 47.755 | 245 | 115 | 5 | 3 | 236 | 85 | 327 | 6.73e-67 | 210 |
| MS.gene77033.t1 | AT4G16270 | 46.888 | 241 | 116 | 5 | 4 | 236 | 112 | 348 | 7.85e-66 | 207 |
| MS.gene77033.t1 | AT2G38380 | 46.939 | 245 | 116 | 6 | 3 | 236 | 92 | 333 | 8.33e-66 | 207 |
| MS.gene77033.t1 | AT3G49120 | 46.531 | 245 | 118 | 5 | 3 | 236 | 93 | 335 | 9.31e-66 | 207 |
| MS.gene77033.t1 | AT2G38390 | 45.492 | 244 | 121 | 5 | 3 | 236 | 92 | 333 | 2.25e-65 | 206 |
| MS.gene77033.t1 | AT5G19890 | 48.178 | 247 | 110 | 7 | 2 | 236 | 87 | 327 | 2.61e-65 | 206 |
| MS.gene77033.t1 | AT5G06730 | 44.898 | 245 | 124 | 4 | 1 | 236 | 92 | 334 | 3.01e-65 | 206 |
| MS.gene77033.t1 | AT1G68850 | 44.578 | 249 | 123 | 6 | 1 | 236 | 89 | 335 | 3.31e-65 | 206 |
| MS.gene77033.t1 | AT4G08780 | 46.122 | 245 | 119 | 5 | 3 | 236 | 85 | 327 | 5.78e-64 | 202 |
| MS.gene77033.t1 | AT1G71695 | 44.915 | 236 | 125 | 4 | 4 | 236 | 106 | 339 | 1.78e-60 | 194 |
| MS.gene77033.t1 | AT3G01190 | 42.739 | 241 | 124 | 6 | 4 | 236 | 87 | 321 | 5.03e-59 | 189 |
| MS.gene77033.t1 | AT5G19880 | 43.902 | 246 | 126 | 4 | 1 | 236 | 86 | 329 | 1.20e-57 | 186 |
| MS.gene77033.t1 | AT5G64120 | 41.079 | 241 | 132 | 4 | 2 | 236 | 92 | 328 | 1.93e-56 | 183 |
| MS.gene77033.t1 | AT2G22420 | 42.387 | 243 | 128 | 5 | 1 | 236 | 82 | 319 | 2.85e-56 | 182 |
| MS.gene77033.t1 | AT5G15180 | 41.494 | 241 | 129 | 6 | 4 | 236 | 93 | 329 | 5.76e-55 | 179 |
| MS.gene77033.t1 | AT4G33420 | 42.979 | 235 | 126 | 6 | 3 | 236 | 98 | 325 | 2.84e-54 | 177 |
| MS.gene77033.t1 | AT1G05260 | 41.393 | 244 | 131 | 6 | 2 | 236 | 85 | 325 | 3.50e-54 | 177 |
| MS.gene77033.t1 | AT3G03670 | 41.803 | 244 | 126 | 6 | 3 | 236 | 84 | 321 | 4.42e-54 | 176 |
| MS.gene77033.t1 | AT3G21770 | 41.152 | 243 | 131 | 6 | 2 | 235 | 88 | 327 | 9.86e-54 | 176 |
| MS.gene77033.t1 | AT4G33420 | 42.979 | 235 | 126 | 6 | 3 | 236 | 145 | 372 | 1.35e-53 | 177 |
| MS.gene77033.t1 | AT5G40150 | 43.304 | 224 | 122 | 4 | 16 | 236 | 107 | 328 | 2.06e-53 | 175 |
| MS.gene77033.t1 | AT5G51890 | 41.152 | 243 | 127 | 8 | 3 | 236 | 87 | 322 | 2.74e-53 | 174 |
| MS.gene77033.t1 | AT5G42180 | 41.004 | 239 | 127 | 5 | 3 | 234 | 84 | 315 | 4.89e-53 | 174 |
| MS.gene77033.t1 | AT5G17820 | 39.669 | 242 | 130 | 5 | 2 | 236 | 81 | 313 | 1.58e-52 | 172 |
| MS.gene77033.t1 | AT5G17820 | 39.669 | 242 | 130 | 5 | 2 | 236 | 134 | 366 | 1.70e-51 | 171 |
| MS.gene77033.t1 | AT1G05240 | 39.592 | 245 | 134 | 6 | 2 | 236 | 85 | 325 | 3.39e-51 | 169 |
| MS.gene77033.t1 | AT1G05250 | 39.592 | 245 | 134 | 6 | 2 | 236 | 85 | 325 | 3.39e-51 | 169 |
| MS.gene77033.t1 | AT5G39580 | 41.322 | 242 | 131 | 5 | 2 | 236 | 82 | 319 | 5.60e-51 | 168 |
| MS.gene77033.t1 | AT2G41480 | 41.057 | 246 | 129 | 6 | 3 | 236 | 87 | 328 | 6.13e-51 | 169 |
| MS.gene77033.t1 | AT4G11290 | 39.669 | 242 | 134 | 6 | 4 | 236 | 88 | 326 | 7.62e-51 | 168 |
| MS.gene77033.t1 | AT4G30170 | 41.304 | 230 | 124 | 5 | 16 | 236 | 98 | 325 | 1.44e-50 | 167 |
| MS.gene77033.t1 | AT5G14130 | 39.506 | 243 | 136 | 5 | 2 | 236 | 91 | 330 | 5.88e-50 | 166 |
| MS.gene77033.t1 | AT5G14130 | 39.506 | 243 | 136 | 5 | 2 | 236 | 132 | 371 | 1.25e-49 | 166 |
| MS.gene77033.t1 | AT1G30870 | 42.917 | 240 | 119 | 7 | 8 | 236 | 113 | 345 | 3.97e-49 | 164 |
| MS.gene77033.t1 | AT2G18980 | 39.738 | 229 | 129 | 3 | 16 | 236 | 96 | 323 | 6.90e-49 | 163 |
| MS.gene77033.t1 | AT4G33870 | 33.455 | 275 | 138 | 6 | 3 | 235 | 129 | 400 | 1.19e-47 | 162 |
| MS.gene77033.t1 | AT5G47000 | 40.444 | 225 | 128 | 4 | 16 | 236 | 108 | 330 | 1.42e-47 | 160 |
| MS.gene77033.t1 | AT3G28200 | 40.359 | 223 | 129 | 4 | 16 | 236 | 96 | 316 | 2.72e-47 | 159 |
| MS.gene77033.t1 | AT4G17690 | 40.625 | 224 | 128 | 4 | 16 | 236 | 101 | 322 | 6.83e-47 | 158 |
| MS.gene77033.t1 | AT4G37530 | 39.556 | 225 | 127 | 3 | 16 | 232 | 102 | 325 | 3.46e-46 | 156 |
| MS.gene77033.t1 | AT4G26010 | 38.723 | 235 | 135 | 6 | 3 | 236 | 83 | 309 | 6.34e-46 | 155 |
| MS.gene77033.t1 | AT5G64110 | 39.592 | 245 | 133 | 5 | 2 | 236 | 91 | 330 | 8.52e-46 | 155 |
| MS.gene77033.t1 | AT4G26010 | 38.723 | 235 | 135 | 6 | 3 | 236 | 111 | 337 | 9.86e-46 | 155 |
| MS.gene77033.t1 | AT5G64100 | 39.754 | 244 | 130 | 6 | 3 | 236 | 95 | 331 | 2.14e-45 | 154 |
| MS.gene77033.t1 | AT2G34060 | 40.529 | 227 | 124 | 5 | 16 | 233 | 119 | 343 | 2.13e-44 | 152 |
| MS.gene77033.t1 | AT1G24110 | 38.272 | 243 | 138 | 7 | 3 | 236 | 83 | 322 | 3.90e-44 | 151 |
| MS.gene77033.t1 | AT4G31760 | 37.705 | 244 | 141 | 3 | 2 | 236 | 85 | 326 | 7.32e-44 | 150 |
| MS.gene77033.t1 | AT5G24070 | 36.032 | 247 | 141 | 6 | 2 | 236 | 94 | 335 | 5.10e-43 | 148 |
| MS.gene77033.t1 | AT1G34510 | 37.447 | 235 | 138 | 6 | 3 | 236 | 83 | 309 | 5.25e-43 | 147 |
| MS.gene77033.t1 | AT5G67400 | 38.496 | 226 | 128 | 4 | 16 | 232 | 102 | 325 | 1.69e-42 | 147 |
| MS.gene77033.t1 | AT5G22410 | 35.246 | 244 | 140 | 9 | 2 | 233 | 85 | 322 | 1.71e-42 | 147 |
| MS.gene77033.t1 | AT4G37520 | 37.778 | 225 | 131 | 3 | 16 | 232 | 102 | 325 | 5.06e-42 | 145 |
| MS.gene77033.t1 | AT2G39040 | 39.759 | 249 | 129 | 10 | 3 | 236 | 108 | 350 | 8.42e-42 | 145 |
| MS.gene77033.t1 | AT2G43480 | 35.628 | 247 | 142 | 6 | 2 | 236 | 94 | 335 | 5.88e-41 | 143 |
| MS.gene77033.t1 | AT3G49960 | 36.667 | 240 | 140 | 5 | 3 | 232 | 88 | 325 | 2.07e-40 | 141 |
| MS.gene77033.t1 | AT4G37520 | 37.333 | 225 | 129 | 4 | 16 | 232 | 102 | 322 | 3.37e-40 | 140 |
| MS.gene77033.t1 | AT2G37130 | 36.842 | 228 | 136 | 5 | 15 | 236 | 71 | 296 | 9.08e-39 | 136 |
| MS.gene77033.t1 | AT2G24800 | 35.124 | 242 | 145 | 4 | 5 | 236 | 90 | 329 | 9.25e-39 | 137 |
| MS.gene77033.t1 | AT2G37130 | 36.842 | 228 | 136 | 5 | 15 | 236 | 102 | 327 | 1.84e-38 | 136 |
| MS.gene77033.t1 | AT4G37530 | 41.573 | 178 | 95 | 3 | 16 | 185 | 102 | 278 | 1.05e-37 | 133 |
| MS.gene77033.t1 | AT4G21960 | 33.480 | 227 | 144 | 4 | 15 | 236 | 103 | 327 | 3.42e-37 | 133 |
| MS.gene77033.t1 | AT4G25980 | 34.553 | 246 | 145 | 5 | 3 | 236 | 85 | 326 | 3.76e-37 | 133 |
| MS.gene77033.t1 | AT1G77100 | 37.190 | 242 | 140 | 8 | 2 | 236 | 83 | 319 | 6.90e-36 | 129 |
| MS.gene77033.t1 | AT3G17070 | 34.286 | 245 | 145 | 6 | 1 | 236 | 39 | 276 | 7.02e-34 | 123 |
| MS.gene77033.t1 | AT3G17070 | 34.286 | 245 | 145 | 6 | 1 | 236 | 102 | 339 | 2.05e-33 | 123 |
| MS.gene77033.t1 | AT5G39580 | 42.308 | 130 | 67 | 4 | 2 | 131 | 82 | 203 | 1.60e-21 | 89.7 |
| MS.gene77033.t1 | AT4G25980 | 41.593 | 113 | 62 | 3 | 3 | 115 | 130 | 238 | 3.28e-18 | 81.6 |
| MS.gene77033.t1 | AT4G32320 | 31.507 | 219 | 92 | 7 | 10 | 217 | 150 | 321 | 6.86e-17 | 78.6 |
| MS.gene77033.t1 | AT2G24800 | 39.062 | 128 | 70 | 5 | 5 | 131 | 90 | 210 | 1.24e-16 | 76.6 |
| MS.gene77033.t1 | AT1G77490 | 26.702 | 191 | 120 | 5 | 34 | 218 | 163 | 339 | 2.81e-13 | 68.9 |
| MS.gene77033.t1 | AT1G77490 | 26.702 | 191 | 120 | 5 | 34 | 218 | 163 | 339 | 3.03e-13 | 68.9 |
Find 46 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAGTTGAATTTATATT+TGG | 0.137169 | 4.3:-70501043 | None:intergenic |
| CAATATCTTGATGAATTAAT+TGG | 0.179883 | 4.3:-70502522 | None:intergenic |
| TGAAGTGGTTGATGAGATTA+AGG | 0.263243 | 4.3:+70501069 | MS.gene77033:CDS |
| ATTGGAGTCTCCGCCTTCTC+TGG | 0.268359 | 4.3:-70502249 | None:intergenic |
| TCGGATCAGGAATTATTAAA+TGG | 0.273047 | 4.3:+70502356 | MS.gene77033:CDS |
| CAAGACCTCGTTGCCCTATC+TGG | 0.286123 | 4.3:+70502122 | MS.gene77033:CDS |
| GGAAATATTAAGACACTTAC+TGG | 0.289226 | 4.3:+70502464 | MS.gene77033:CDS |
| TTATTAAATGGTGATTATAC+TGG | 0.313939 | 4.3:+70502368 | MS.gene77033:CDS |
| AGTCGTGCCGCTGCAGATTC+AGG | 0.315066 | 4.3:+70502029 | MS.gene77033:CDS |
| CATCGAAAATTTCAACAATC+AGG | 0.331543 | 4.3:+70502088 | MS.gene77033:CDS |
| TGCGAAATCTATGATTAAGA+TGG | 0.368103 | 4.3:+70502442 | MS.gene77033:CDS |
| AAAGAAAGGGCTTCTTCATT+CGG | 0.378097 | 4.3:+70502337 | MS.gene77033:CDS |
| CCTAGTTGCACTTTCCATGA+TGG | 0.386662 | 4.3:-70501984 | None:intergenic |
| CTATCTGGAGCACACACTAT+TGG | 0.391267 | 4.3:+70502137 | MS.gene77033:CDS |
| CAATAGTGTGTGCTCCAGAT+AGG | 0.400931 | 4.3:-70502136 | None:intergenic |
| ACAGTCCAGAGCTGCAAGAT+TGG | 0.419756 | 4.3:-70502267 | None:intergenic |
| AGACTCCAATCTTGCAGCTC+TGG | 0.425576 | 4.3:+70502262 | MS.gene77033:CDS |
| AGAAAGACTGAATGATGGTC+TGG | 0.443512 | 4.3:-70502060 | None:intergenic |
| TGTTTCTTGTGCAGACATAT+TGG | 0.453461 | 4.3:+70501123 | MS.gene77033:CDS |
| AGGGCTTCTTCATTCGGATC+AGG | 0.466116 | 4.3:+70502343 | MS.gene77033:CDS |
| TTGGAGTCTCCGCCTTCTCT+GGG | 0.490910 | 4.3:-70502248 | None:intergenic |
| ATGTCTGCACAAGAAACAAC+TGG | 0.493198 | 4.3:-70501118 | None:intergenic |
| GCGAAATCTATGATTAAGAT+GGG | 0.499275 | 4.3:+70502443 | MS.gene77033:CDS |
| GATCGTTGGTTAGAAAATAT+AGG | 0.503912 | 4.3:+70502390 | MS.gene77033:CDS |
| GTGAAATTCGTTCAAACTGC+AGG | 0.508334 | 4.3:+70502495 | MS.gene77033:CDS |
| ATCGAAAATTTCAACAATCA+GGG | 0.538722 | 4.3:+70502089 | MS.gene77033:CDS |
| AATAGTGTGTGCTCCAGATA+GGG | 0.548473 | 4.3:-70502135 | None:intergenic |
| CCATCATGGAAAGTGCAACT+AGG | 0.563223 | 4.3:+70501984 | MS.gene77033:CDS |
| TGCAGTTAGGAGGACCATCA+TGG | 0.582902 | 4.3:+70501970 | MS.gene77033:intron |
| TGGTGATTATACTGGATCGT+TGG | 0.583357 | 4.3:+70502376 | MS.gene77033:CDS |
| CAAGACACTTGTCCCAGAGA+AGG | 0.586835 | 4.3:+70502236 | MS.gene77033:CDS |
| GAAAGACTGAATGATGGTCT+GGG | 0.589662 | 4.3:-70502059 | None:intergenic |
| CCAAATATAAATTCAACTAG+AGG | 0.594419 | 4.3:+70501043 | MS.gene77033:CDS |
| ATTCGATGTGGCATATTACA+CGG | 0.602093 | 4.3:+70502304 | MS.gene77033:CDS |
| GACACTTGTCCCAGAGAAGG+CGG | 0.607116 | 4.3:+70502239 | MS.gene77033:CDS |
| GAAGCTGTTGATAAAGCATG+TGG | 0.618722 | 4.3:+70501091 | MS.gene77033:CDS |
| TTCAACTAGAGGATTTGAAG+TGG | 0.618774 | 4.3:+70501054 | MS.gene77033:CDS |
| AAGACACTTACTGGGAGTCA+AGG | 0.621054 | 4.3:+70502473 | MS.gene77033:CDS |
| TGCAAGAGACTCTGTCGTTG+CGG | 0.621078 | 4.3:+70501153 | MS.gene77033:CDS |
| TTATATATGATGCAGTTAGG+AGG | 0.622538 | 4.3:+70501960 | MS.gene77033:intron |
| AGTTGAGAAAGACTGAATGA+TGG | 0.624278 | 4.3:-70502065 | None:intergenic |
| AGCTCTGGACTGTGTTACAC+CGG | 0.693086 | 4.3:+70502277 | MS.gene77033:CDS |
| GAAATATTAAGACACTTACT+GGG | 0.695568 | 4.3:+70502465 | MS.gene77033:CDS |
| AATGTTGCCTGAATCTGCAG+CGG | 0.699083 | 4.3:-70502036 | None:intergenic |
| TACACCGGCAAAATTCGATG+TGG | 0.718388 | 4.3:+70502292 | MS.gene77033:CDS |
| GTGCTCCAGATAGGGCAACG+AGG | 0.748414 | 4.3:-70502127 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAAAATAAAGTTAATAAA+AGG | + | chr4.3:70501261-70501280 | MS.gene77033:intron | 10.0% |
| !! | ATTATCTTGTGATATTATTT+AGG | - | chr4.3:70501691-70501710 | None:intergenic | 15.0% |
| !! | ATTTCTTTATGTAAAAGAAT+AGG | + | chr4.3:70501508-70501527 | MS.gene77033:intron | 15.0% |
| !! | GATAATTAAGATTTATTTGA+TGG | + | chr4.3:70501705-70501724 | MS.gene77033:intron | 15.0% |
| !! | TTATCTTGTGATATTATTTA+GGG | - | chr4.3:70501690-70501709 | None:intergenic | 15.0% |
| !!! | AATTTTGATATATTCAAAGT+TGG | - | chr4.3:70501370-70501389 | None:intergenic | 15.0% |
| !! | AATATATACACATCATTAGA+AGG | - | chr4.3:70501831-70501850 | None:intergenic | 20.0% |
| !! | TAAAGTTAATAAAAGGAAGT+TGG | + | chr4.3:70501268-70501287 | MS.gene77033:intron | 20.0% |
| !! | TTATTAAATGGTGATTATAC+TGG | + | chr4.3:70502368-70502387 | MS.gene77033:CDS | 20.0% |
| !! | TTATTAGCAAGTTACATATT+TGG | - | chr4.3:70501400-70501419 | None:intergenic | 20.0% |
| !!! | ATGATGTGTATATATTGATT+TGG | + | chr4.3:70501835-70501854 | MS.gene77033:intron | 20.0% |
| !!! | GATATTAAAGAAGTTTTTGT+AGG | - | chr4.3:70501874-70501893 | None:intergenic | 20.0% |
| ! | ATCGAAAATTTCAACAATCA+GGG | + | chr4.3:70502089-70502108 | MS.gene77033:CDS | 25.0% |
| ! | CAATTATATATGATGCAGTT+AGG | + | chr4.3:70501957-70501976 | MS.gene77033:intron | 25.0% |
| ! | CCAAATATAAATTCAACTAG+AGG | + | chr4.3:70501043-70501062 | MS.gene77033:CDS | 25.0% |
| ! | CCTCTAGTTGAATTTATATT+TGG | - | chr4.3:70501046-70501065 | None:intergenic | 25.0% |
| ! | CTAACTTATCTTTCTTTACT+CGG | + | chr4.3:70501321-70501340 | MS.gene77033:intron | 25.0% |
| ! | GAAATATTAAGACACTTACT+GGG | + | chr4.3:70502465-70502484 | MS.gene77033:CDS | 25.0% |
| ! | TTTGATATATTCAAAGTTGG+TGG | - | chr4.3:70501367-70501386 | None:intergenic | 25.0% |
| !!! | ATATTATTTAGGGTCTTGTT+AGG | - | chr4.3:70501680-70501699 | None:intergenic | 25.0% |
| !!! | GATTTTGTTCTTTGAGTTAT+TGG | - | chr4.3:70501896-70501915 | None:intergenic | 25.0% |
| !!! | TATTATTTAGGGTCTTGTTA+GGG | - | chr4.3:70501679-70501698 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTCATTGTAGATT+CGG | - | chr4.3:70502190-70502209 | None:intergenic | 25.0% |
| ACGGAACTGATTAAAAAGAA+AGG | + | chr4.3:70502323-70502342 | MS.gene77033:CDS | 30.0% | |
| CATCGAAAATTTCAACAATC+AGG | + | chr4.3:70502088-70502107 | MS.gene77033:CDS | 30.0% | |
| CGGAACTGATTAAAAAGAAA+GGG | + | chr4.3:70502324-70502343 | MS.gene77033:CDS | 30.0% | |
| GCGAAATCTATGATTAAGAT+GGG | + | chr4.3:70502443-70502462 | MS.gene77033:CDS | 30.0% | |
| GGAAATATTAAGACACTTAC+TGG | + | chr4.3:70502464-70502483 | MS.gene77033:CDS | 30.0% | |
| TAAAACAGAATTAGTCAGCA+TGG | + | chr4.3:70501239-70501258 | MS.gene77033:intron | 30.0% | |
| TCGGATCAGGAATTATTAAA+TGG | + | chr4.3:70502356-70502375 | MS.gene77033:CDS | 30.0% | |
| TGCGAAATCTATGATTAAGA+TGG | + | chr4.3:70502442-70502461 | MS.gene77033:CDS | 30.0% | |
| TTATATATGATGCAGTTAGG+AGG | + | chr4.3:70501960-70501979 | MS.gene77033:intron | 30.0% | |
| ! | GATCGTTGGTTAGAAAATAT+AGG | + | chr4.3:70502390-70502409 | MS.gene77033:CDS | 30.0% |
| AAAGAAAGGGCTTCTTCATT+CGG | + | chr4.3:70502337-70502356 | MS.gene77033:CDS | 35.0% | |
| AGTTGAGAAAGACTGAATGA+TGG | - | chr4.3:70502068-70502087 | None:intergenic | 35.0% | |
| ATTCGATGTGGCATATTACA+CGG | + | chr4.3:70502304-70502323 | MS.gene77033:CDS | 35.0% | |
| CCACAACAAATTATGTTCAC+TGG | + | chr4.3:70501742-70501761 | MS.gene77033:intron | 35.0% | |
| TGTTTCTTGTGCAGACATAT+TGG | + | chr4.3:70501123-70501142 | MS.gene77033:CDS | 35.0% | |
| TTCAACTAGAGGATTTGAAG+TGG | + | chr4.3:70501054-70501073 | MS.gene77033:CDS | 35.0% | |
| !! | CCAGTGAACATAATTTGTTG+TGG | - | chr4.3:70501745-70501764 | None:intergenic | 35.0% |
| !! | TGAAGTGGTTGATGAGATTA+AGG | + | chr4.3:70501069-70501088 | MS.gene77033:CDS | 35.0% |
| AACGCTAAACAATGTCCTCA+GGG | + | chr4.3:70501533-70501552 | MS.gene77033:intron | 40.0% | |
| AATAGTGTGTGCTCCAGATA+GGG | - | chr4.3:70502138-70502157 | None:intergenic | 40.0% | |
| AGAAAGACTGAATGATGGTC+TGG | - | chr4.3:70502063-70502082 | None:intergenic | 40.0% | |
| ATGTCTGCACAAGAAACAAC+TGG | - | chr4.3:70501121-70501140 | None:intergenic | 40.0% | |
| GAAAGACTGAATGATGGTCT+GGG | - | chr4.3:70502062-70502081 | None:intergenic | 40.0% | |
| GTGAAATTCGTTCAAACTGC+AGG | + | chr4.3:70502495-70502514 | MS.gene77033:CDS | 40.0% | |
| TCAAGACCAACAATCATGCA+TGG | - | chr4.3:70501806-70501825 | None:intergenic | 40.0% | |
| TGGTGATTATACTGGATCGT+TGG | + | chr4.3:70502376-70502395 | MS.gene77033:CDS | 40.0% | |
| ! | ATGGAGTGTCTCTAACTAGT+TGG | - | chr4.3:70501787-70501806 | None:intergenic | 40.0% |
| ! | GAAGCTGTTGATAAAGCATG+TGG | + | chr4.3:70501091-70501110 | MS.gene77033:CDS | 40.0% |
| ! | TATGCCACATCGAATTTTGC+CGG | - | chr4.3:70502299-70502318 | None:intergenic | 40.0% |
| AAACAATGTCCTCAGGGCAT+TGG | + | chr4.3:70501539-70501558 | MS.gene77033:intron | 45.0% | |
| AAGACACTTACTGGGAGTCA+AGG | + | chr4.3:70502473-70502492 | MS.gene77033:CDS | 45.0% | |
| AATGTTGCCTGAATCTGCAG+CGG | - | chr4.3:70502039-70502058 | None:intergenic | 45.0% | |
| ATTGCTTAACCAATGCCCTG+AGG | - | chr4.3:70501551-70501570 | None:intergenic | 45.0% | |
| CAATAGTGTGTGCTCCAGAT+AGG | - | chr4.3:70502139-70502158 | None:intergenic | 45.0% | |
| CCTAGTTGCACTTTCCATGA+TGG | - | chr4.3:70501987-70502006 | None:intergenic | 45.0% | |
| GAACGCTAAACAATGTCCTC+AGG | + | chr4.3:70501532-70501551 | MS.gene77033:intron | 45.0% | |
| GACACTCCATGCATGATTGT+TGG | + | chr4.3:70501797-70501816 | MS.gene77033:intron | 45.0% | |
| TACACCGGCAAAATTCGATG+TGG | + | chr4.3:70502292-70502311 | MS.gene77033:CDS | 45.0% | |
| ! | CCATCATGGAAAGTGCAACT+AGG | + | chr4.3:70501984-70502003 | MS.gene77033:CDS | 45.0% |
| ! | CTATCTGGAGCACACACTAT+TGG | + | chr4.3:70502137-70502156 | MS.gene77033:CDS | 45.0% |
| ACAGTCCAGAGCTGCAAGAT+TGG | - | chr4.3:70502270-70502289 | None:intergenic | 50.0% | |
| AGACTCCAATCTTGCAGCTC+TGG | + | chr4.3:70502262-70502281 | MS.gene77033:CDS | 50.0% | |
| AGGGCTTCTTCATTCGGATC+AGG | + | chr4.3:70502343-70502362 | MS.gene77033:CDS | 50.0% | |
| CAAGACACTTGTCCCAGAGA+AGG | + | chr4.3:70502236-70502255 | MS.gene77033:CDS | 50.0% | |
| TGCAAGAGACTCTGTCGTTG+CGG | + | chr4.3:70501153-70501172 | MS.gene77033:CDS | 50.0% | |
| TGCAGTTAGGAGGACCATCA+TGG | + | chr4.3:70501970-70501989 | MS.gene77033:intron | 50.0% | |
| !! | AGCTCTGGACTGTGTTACAC+CGG | + | chr4.3:70502277-70502296 | MS.gene77033:CDS | 50.0% |
| ATTGGAGTCTCCGCCTTCTC+TGG | - | chr4.3:70502252-70502271 | None:intergenic | 55.0% | |
| CAAGACCTCGTTGCCCTATC+TGG | + | chr4.3:70502122-70502141 | MS.gene77033:CDS | 55.0% | |
| GACACTTGTCCCAGAGAAGG+CGG | + | chr4.3:70502239-70502258 | MS.gene77033:CDS | 55.0% | |
| TTGGAGTCTCCGCCTTCTCT+GGG | - | chr4.3:70502251-70502270 | None:intergenic | 55.0% | |
| GTGCTCCAGATAGGGCAACG+AGG | - | chr4.3:70502130-70502149 | None:intergenic | 60.0% | |
| ! | AGTCGTGCCGCTGCAGATTC+AGG | + | chr4.3:70502029-70502048 | MS.gene77033:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 70501019 | 70502529 | 70501019 | ID=MS.gene77033 |
| chr4.3 | mRNA | 70501019 | 70502529 | 70501019 | ID=MS.gene77033.t1;Parent=MS.gene77033 |
| chr4.3 | exon | 70501019 | 70501174 | 70501019 | ID=MS.gene77033.t1.exon1;Parent=MS.gene77033.t1 |
| chr4.3 | CDS | 70501019 | 70501174 | 70501019 | ID=cds.MS.gene77033.t1;Parent=MS.gene77033.t1 |
| chr4.3 | exon | 70501975 | 70502529 | 70501975 | ID=MS.gene77033.t1.exon2;Parent=MS.gene77033.t1 |
| chr4.3 | CDS | 70501975 | 70502529 | 70501975 | ID=cds.MS.gene77033.t1;Parent=MS.gene77033.t1 |
| Gene Sequence |
| Protein sequence |
