Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50279.t1 | XP_003605087.1 | 96.4 | 329 | 12 | 0 | 1 | 329 | 1 | 329 | 1.50E-179 | 638.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50279.t1 | Q40316 | 49.2 | 329 | 164 | 3 | 1 | 329 | 1 | 326 | 8.2e-89 | 328.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50279.t1 | G7JDF6 | 96.4 | 329 | 12 | 0 | 1 | 329 | 1 | 329 | 1.1e-179 | 638.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene50279 | -0.805576 | 1.25E-49 | -1.69E-46 |
| MS.gene04925 | MS.gene50279 | 0.824065 | 9.88E-54 | -1.69E-46 |
| MS.gene04926 | MS.gene50279 | 0.825382 | 4.83E-54 | -1.69E-46 |
| MS.gene04927 | MS.gene50279 | 0.800056 | 1.72E-48 | -1.69E-46 |
| MS.gene049320 | MS.gene50279 | -0.801007 | 1.10E-48 | -1.69E-46 |
| MS.gene049549 | MS.gene50279 | 0.864328 | 1.32E-64 | -1.69E-46 |
| MS.gene049609 | MS.gene50279 | -0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene049813 | MS.gene50279 | 0.801201 | 1.01E-48 | -1.69E-46 |
| MS.gene050095 | MS.gene50279 | 0.839837 | 1.25E-57 | -1.69E-46 |
| MS.gene050096 | MS.gene50279 | 0.843031 | 1.80E-58 | -1.69E-46 |
| MS.gene050381 | MS.gene50279 | 0.812353 | 4.42E-51 | -1.69E-46 |
| MS.gene050479 | MS.gene50279 | 0.813891 | 2.03E-51 | -1.69E-46 |
| MS.gene050547 | MS.gene50279 | 0.82 | 8.64E-53 | -1.69E-46 |
| MS.gene050647 | MS.gene50279 | 0.823282 | 1.51E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene50279 | -0.802943 | 4.41E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene50279 | 0.823347 | 1.45E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene50279 | -0.80628 | 8.88E-50 | -1.69E-46 |
| MS.gene050822 | MS.gene50279 | 0.80235 | 5.85E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene50279 | 0.800462 | 1.43E-48 | -1.69E-46 |
| MS.gene050950 | MS.gene50279 | -0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene051044 | MS.gene50279 | 0.802099 | 6.59E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene50279 | 0.807386 | 5.18E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene50279 | 0.812299 | 4.55E-51 | -1.69E-46 |
| MS.gene051131 | MS.gene50279 | 0.821563 | 3.78E-53 | -1.69E-46 |
| MS.gene051385 | MS.gene50279 | 0.816299 | 5.94E-52 | -1.69E-46 |
| MS.gene051440 | MS.gene50279 | 0.82038 | 7.07E-53 | -1.69E-46 |
| MS.gene051844 | MS.gene50279 | 0.800102 | 1.69E-48 | -1.69E-46 |
| MS.gene051973 | MS.gene50279 | 0.801229 | 9.94E-49 | -1.69E-46 |
| MS.gene051996 | MS.gene50279 | 0.80534 | 1.40E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene50279 | 0.863248 | 2.85E-64 | -1.69E-46 |
| MS.gene052212 | MS.gene50279 | 0.822714 | 2.04E-53 | -1.69E-46 |
| MS.gene05240 | MS.gene50279 | 0.857601 | 1.46E-62 | -1.69E-46 |
| MS.gene05244 | MS.gene50279 | 0.80508 | 1.59E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene50279 | -0.802479 | 5.50E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene50279 | -0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene50279 | 0.844337 | 8.05E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene50279 | -0.806984 | 6.31E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene50279 | -0.800519 | 1.39E-48 | -1.69E-46 |
| MS.gene053031 | MS.gene50279 | 0.818183 | 2.24E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene50279 | -0.808612 | 2.84E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene50279 | -0.804767 | 1.84E-49 | -1.69E-46 |
| MS.gene053403 | MS.gene50279 | 0.858114 | 1.03E-62 | -1.69E-46 |
| MS.gene053406 | MS.gene50279 | 0.871897 | 4.81E-67 | -1.69E-46 |
| MS.gene053436 | MS.gene50279 | -0.811516 | 6.73E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene50279 | 0.807716 | 4.41E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene50279 | -0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene50279 | 0.827204 | 1.78E-54 | -1.69E-46 |
| MS.gene054146 | MS.gene50279 | 0.852727 | 3.82E-61 | -1.69E-46 |
| MS.gene054147 | MS.gene50279 | 0.828754 | 7.54E-55 | -1.69E-46 |
| MS.gene054277 | MS.gene50279 | 0.822189 | 2.71E-53 | -1.69E-46 |
| MS.gene054421 | MS.gene50279 | 0.822974 | 1.78E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene50279 | -0.802352 | 5.84E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene50279 | -0.820827 | 5.58E-53 | -1.69E-46 |
| MS.gene054742 | MS.gene50279 | 0.867457 | 1.35E-65 | -1.69E-46 |
| MS.gene05483 | MS.gene50279 | 0.817157 | 3.82E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene50279 | -0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene50279 | 0.822153 | 2.76E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene50279 | 0.823733 | 1.18E-53 | -1.69E-46 |
| MS.gene055240 | MS.gene50279 | 0.855582 | 5.73E-62 | -1.69E-46 |
| MS.gene055289 | MS.gene50279 | -0.81039 | 1.18E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene50279 | -0.801557 | 8.51E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene50279 | -0.814246 | 1.70E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene50279 | -0.807325 | 5.34E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene50279 | 0.815627 | 8.39E-52 | -1.69E-46 |
| MS.gene056218 | MS.gene50279 | 0.844138 | 9.10E-59 | -1.69E-46 |
| MS.gene056224 | MS.gene50279 | 0.80931 | 2.02E-50 | -1.69E-46 |
| MS.gene056359 | MS.gene50279 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene056590 | MS.gene50279 | 0.828695 | 7.79E-55 | -1.69E-46 |
| MS.gene056591 | MS.gene50279 | 0.828728 | 7.65E-55 | -1.69E-46 |
| MS.gene056680 | MS.gene50279 | 0.829904 | 3.96E-55 | -1.69E-46 |
| MS.gene056748 | MS.gene50279 | 0.833613 | 4.82E-56 | -1.69E-46 |
| MS.gene056920 | MS.gene50279 | 0.828939 | 6.80E-55 | -1.69E-46 |
| MS.gene056988 | MS.gene50279 | 0.809985 | 1.44E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene50279 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene057550 | MS.gene50279 | 0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene058109 | MS.gene50279 | 0.800043 | 1.73E-48 | -1.69E-46 |
| MS.gene05837 | MS.gene50279 | -0.813333 | 2.70E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene50279 | -0.80099 | 1.11E-48 | -1.69E-46 |
| MS.gene058450 | MS.gene50279 | 0.809962 | 1.46E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene50279 | -0.819105 | 1.38E-52 | -1.69E-46 |
| MS.gene058603 | MS.gene50279 | 0.834531 | 2.84E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene50279 | -0.812587 | 3.93E-51 | -1.69E-46 |
| MS.gene059060 | MS.gene50279 | 0.809991 | 1.44E-50 | -1.69E-46 |
| MS.gene059892 | MS.gene50279 | 0.810797 | 9.64E-51 | -1.69E-46 |
| MS.gene059953 | MS.gene50279 | 0.840013 | 1.12E-57 | -1.69E-46 |
| MS.gene059955 | MS.gene50279 | 0.830996 | 2.14E-55 | -1.69E-46 |
| MS.gene060087 | MS.gene50279 | 0.854408 | 1.26E-61 | -1.69E-46 |
| MS.gene060358 | MS.gene50279 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene50279 | -0.815917 | 7.23E-52 | -1.69E-46 |
| MS.gene061038 | MS.gene50279 | 0.818899 | 1.54E-52 | -1.69E-46 |
| MS.gene061092 | MS.gene50279 | 0.821759 | 3.40E-53 | -1.69E-46 |
| MS.gene061094 | MS.gene50279 | 0.818861 | 1.57E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50279.t1 | MTR_4g023730 | 96.353 | 329 | 12 | 0 | 1 | 329 | 1 | 329 | 0.0 | 659 |
| MS.gene50279.t1 | MTR_7g074850 | 50.453 | 331 | 160 | 3 | 1 | 329 | 1 | 329 | 6.68e-116 | 338 |
| MS.gene50279.t1 | MTR_7g074710 | 48.936 | 329 | 165 | 3 | 1 | 329 | 1 | 326 | 2.55e-115 | 337 |
| MS.gene50279.t1 | MTR_7g074880 | 50.456 | 329 | 160 | 3 | 1 | 329 | 1 | 326 | 3.03e-115 | 337 |
| MS.gene50279.t1 | MTR_7g074730 | 50.303 | 330 | 161 | 3 | 1 | 329 | 1 | 328 | 2.58e-114 | 334 |
| MS.gene50279.t1 | MTR_7g074820 | 49.849 | 331 | 162 | 3 | 1 | 329 | 1 | 329 | 3.27e-113 | 331 |
| MS.gene50279.t1 | MTR_1g022440 | 42.105 | 323 | 183 | 2 | 7 | 329 | 7 | 325 | 6.61e-97 | 290 |
| MS.gene50279.t1 | MTR_1g022445 | 41.615 | 322 | 184 | 2 | 8 | 329 | 8 | 325 | 3.11e-94 | 283 |
| MS.gene50279.t1 | MTR_7g074870 | 49.301 | 286 | 143 | 2 | 44 | 329 | 5 | 288 | 4.97e-92 | 276 |
| MS.gene50279.t1 | MTR_4g081440 | 38.166 | 338 | 184 | 7 | 9 | 329 | 25 | 354 | 1.18e-68 | 218 |
| MS.gene50279.t1 | MTR_4g081440 | 37.870 | 338 | 184 | 7 | 9 | 329 | 21 | 349 | 5.06e-68 | 217 |
| MS.gene50279.t1 | MTR_4g092080 | 35.312 | 337 | 203 | 7 | 1 | 328 | 7 | 337 | 2.07e-63 | 204 |
| MS.gene50279.t1 | MTR_2g101330 | 33.436 | 326 | 202 | 7 | 8 | 329 | 5 | 319 | 1.77e-57 | 189 |
| MS.gene50279.t1 | MTR_4g009040 | 36.418 | 335 | 186 | 12 | 3 | 329 | 8 | 323 | 7.24e-50 | 169 |
| MS.gene50279.t1 | MTR_8g062440 | 35.811 | 296 | 175 | 6 | 1 | 293 | 1 | 284 | 1.93e-49 | 168 |
| MS.gene50279.t1 | MTR_2g013230 | 31.792 | 346 | 213 | 8 | 1 | 329 | 1 | 340 | 1.99e-49 | 168 |
| MS.gene50279.t1 | MTR_3g005210 | 35.379 | 277 | 165 | 5 | 4 | 275 | 2 | 269 | 2.90e-49 | 167 |
| MS.gene50279.t1 | MTR_8g062440 | 35.816 | 282 | 171 | 5 | 1 | 279 | 1 | 275 | 8.94e-49 | 166 |
| MS.gene50279.t1 | MTR_8g062440 | 35.816 | 282 | 170 | 5 | 1 | 279 | 1 | 274 | 1.19e-48 | 166 |
| MS.gene50279.t1 | MTR_4g009040 | 35.905 | 337 | 189 | 12 | 3 | 329 | 8 | 327 | 3.17e-48 | 165 |
| MS.gene50279.t1 | MTR_3g005170 | 35.379 | 277 | 165 | 8 | 3 | 274 | 5 | 272 | 4.26e-48 | 163 |
| MS.gene50279.t1 | MTR_3g031650 | 31.138 | 334 | 199 | 10 | 8 | 329 | 5 | 319 | 4.37e-48 | 164 |
| MS.gene50279.t1 | MTR_7g117190 | 33.043 | 345 | 197 | 9 | 8 | 329 | 7 | 340 | 6.76e-48 | 164 |
| MS.gene50279.t1 | MTR_3g005170 | 35.662 | 272 | 161 | 8 | 8 | 274 | 10 | 272 | 1.21e-47 | 163 |
| MS.gene50279.t1 | MTR_5g056600 | 31.481 | 324 | 210 | 7 | 9 | 329 | 5 | 319 | 2.52e-47 | 162 |
| MS.gene50279.t1 | MTR_8g062110 | 32.862 | 283 | 177 | 5 | 1 | 279 | 2 | 275 | 9.18e-47 | 159 |
| MS.gene50279.t1 | MTR_8g062110 | 32.862 | 283 | 177 | 5 | 1 | 279 | 2 | 275 | 1.40e-46 | 159 |
| MS.gene50279.t1 | MTR_4g006940 | 34.462 | 325 | 195 | 10 | 8 | 329 | 17 | 326 | 1.57e-46 | 160 |
| MS.gene50279.t1 | MTR_8g062110 | 32.862 | 283 | 177 | 5 | 1 | 279 | 2 | 275 | 2.52e-46 | 160 |
| MS.gene50279.t1 | MTR_8g062110 | 32.862 | 283 | 177 | 5 | 1 | 279 | 11 | 284 | 2.59e-46 | 160 |
| MS.gene50279.t1 | MTR_4g077130 | 33.754 | 317 | 187 | 12 | 1 | 308 | 1 | 303 | 1.33e-45 | 158 |
| MS.gene50279.t1 | MTR_5g072620 | 32.326 | 331 | 199 | 10 | 8 | 329 | 5 | 319 | 6.10e-45 | 156 |
| MS.gene50279.t1 | MTR_2g013250 | 30.321 | 343 | 210 | 9 | 5 | 327 | 4 | 337 | 2.32e-44 | 155 |
| MS.gene50279.t1 | MTR_2g028620 | 31.953 | 338 | 205 | 14 | 2 | 329 | 4 | 326 | 6.42e-44 | 154 |
| MS.gene50279.t1 | MTR_4g009690 | 33.837 | 331 | 199 | 9 | 3 | 329 | 8 | 322 | 7.37e-43 | 150 |
| MS.gene50279.t1 | MTR_2g104960 | 33.333 | 324 | 200 | 10 | 8 | 329 | 20 | 329 | 7.89e-43 | 151 |
| MS.gene50279.t1 | MTR_3g031650 | 32.014 | 278 | 173 | 7 | 8 | 279 | 5 | 272 | 1.44e-42 | 148 |
| MS.gene50279.t1 | MTR_4g006940 | 35.036 | 274 | 162 | 8 | 8 | 278 | 17 | 277 | 1.98e-42 | 148 |
| MS.gene50279.t1 | MTR_4g006940 | 35.036 | 274 | 162 | 8 | 8 | 278 | 17 | 277 | 1.98e-42 | 148 |
| MS.gene50279.t1 | MTR_4g009690 | 33.535 | 331 | 201 | 9 | 3 | 329 | 8 | 323 | 3.92e-42 | 149 |
| MS.gene50279.t1 | MTR_4g077100 | 33.101 | 287 | 177 | 7 | 1 | 282 | 3 | 279 | 5.88e-41 | 144 |
| MS.gene50279.t1 | MTR_4g077100 | 33.101 | 287 | 177 | 7 | 1 | 282 | 3 | 279 | 2.19e-40 | 144 |
| MS.gene50279.t1 | MTR_7g117190 | 33.333 | 294 | 166 | 8 | 8 | 278 | 7 | 293 | 4.15e-40 | 143 |
| MS.gene50279.t1 | MTR_2g013260 | 30.836 | 347 | 211 | 8 | 1 | 327 | 1 | 338 | 1.35e-39 | 143 |
| MS.gene50279.t1 | MTR_2g028620 | 32.517 | 286 | 173 | 10 | 2 | 278 | 4 | 278 | 8.35e-39 | 140 |
| MS.gene50279.t1 | MTR_2g013260 | 30.872 | 298 | 181 | 7 | 1 | 278 | 1 | 293 | 4.72e-33 | 124 |
| MS.gene50279.t1 | MTR_3g005170 | 30.797 | 276 | 146 | 9 | 8 | 278 | 10 | 245 | 5.63e-33 | 124 |
| MS.gene50279.t1 | MTR_0164s0070 | 39.062 | 128 | 75 | 2 | 8 | 134 | 5 | 130 | 2.22e-25 | 101 |
| MS.gene50279.t1 | MTR_2g013230 | 28.629 | 248 | 156 | 7 | 99 | 329 | 7 | 250 | 8.85e-22 | 92.8 |
| MS.gene50279.t1 | MTR_5g029990 | 30.481 | 187 | 115 | 5 | 8 | 190 | 12 | 187 | 7.22e-20 | 88.6 |
| MS.gene50279.t1 | MTR_6g406250 | 26.978 | 278 | 179 | 9 | 5 | 271 | 52 | 316 | 4.65e-19 | 87.0 |
| MS.gene50279.t1 | MTR_7g117190 | 29.958 | 237 | 134 | 8 | 116 | 329 | 3 | 230 | 6.70e-19 | 84.3 |
| MS.gene50279.t1 | MTR_8g062110 | 27.419 | 186 | 124 | 4 | 98 | 279 | 11 | 189 | 3.19e-17 | 79.0 |
| MS.gene50279.t1 | MTR_8g062110 | 28.492 | 179 | 117 | 4 | 105 | 279 | 18 | 189 | 5.75e-17 | 79.3 |
| MS.gene50279.t1 | MTR_6g406250 | 27.397 | 219 | 145 | 6 | 5 | 216 | 52 | 263 | 2.05e-16 | 78.2 |
| MS.gene50279.t1 | MTR_2g013260 | 27.530 | 247 | 152 | 7 | 101 | 327 | 28 | 267 | 4.33e-13 | 68.9 |
| MS.gene50279.t1 | MTR_3g011130 | 36.522 | 115 | 66 | 4 | 106 | 216 | 35 | 146 | 9.82e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50279.t1 | AT2G45400 | 51.051 | 333 | 154 | 5 | 3 | 329 | 35 | 364 | 1.23e-114 | 336 |
| MS.gene50279.t1 | AT2G45400 | 52.837 | 282 | 126 | 4 | 3 | 278 | 35 | 315 | 8.76e-102 | 302 |
| MS.gene50279.t1 | AT2G45400 | 49.020 | 306 | 145 | 6 | 32 | 329 | 5 | 307 | 6.53e-95 | 284 |
| MS.gene50279.t1 | AT5G42800 | 41.337 | 329 | 189 | 2 | 1 | 329 | 1 | 325 | 4.22e-88 | 269 |
| MS.gene50279.t1 | AT2G45400 | 56.818 | 220 | 90 | 2 | 3 | 217 | 35 | 254 | 6.47e-85 | 257 |
| MS.gene50279.t1 | AT4G35420 | 36.145 | 332 | 198 | 7 | 1 | 329 | 1 | 321 | 3.17e-69 | 219 |
| MS.gene50279.t1 | AT1G61720 | 36.747 | 332 | 191 | 8 | 9 | 329 | 14 | 337 | 1.79e-62 | 202 |
| MS.gene50279.t1 | AT4G27250 | 34.795 | 342 | 189 | 9 | 2 | 320 | 7 | 337 | 3.85e-57 | 189 |
| MS.gene50279.t1 | AT4G27250 | 34.328 | 335 | 190 | 8 | 2 | 320 | 7 | 327 | 6.31e-56 | 185 |
| MS.gene50279.t1 | AT2G02400 | 31.420 | 331 | 206 | 11 | 5 | 329 | 3 | 318 | 2.96e-50 | 170 |
| MS.gene50279.t1 | AT1G09510 | 35.971 | 278 | 166 | 5 | 1 | 274 | 1 | 270 | 1.12e-49 | 168 |
| MS.gene50279.t1 | AT1G51410 | 35.125 | 279 | 169 | 7 | 4 | 278 | 5 | 275 | 1.36e-48 | 166 |
| MS.gene50279.t1 | AT5G19440 | 33.945 | 327 | 195 | 11 | 8 | 327 | 10 | 322 | 2.94e-48 | 165 |
| MS.gene50279.t1 | AT1G09480 | 33.435 | 329 | 198 | 8 | 8 | 329 | 8 | 322 | 6.86e-48 | 164 |
| MS.gene50279.t1 | AT5G58490 | 32.647 | 340 | 200 | 10 | 1 | 329 | 2 | 323 | 8.82e-48 | 164 |
| MS.gene50279.t1 | AT1G68540 | 32.099 | 324 | 208 | 7 | 10 | 329 | 6 | 321 | 2.04e-47 | 162 |
| MS.gene50279.t1 | AT1G09480 | 33.435 | 329 | 198 | 8 | 8 | 329 | 55 | 369 | 2.22e-47 | 164 |
| MS.gene50279.t1 | AT2G33590 | 34.603 | 315 | 177 | 8 | 5 | 309 | 6 | 301 | 1.49e-46 | 160 |
| MS.gene50279.t1 | AT1G66800 | 34.296 | 277 | 168 | 5 | 1 | 274 | 1 | 266 | 1.71e-46 | 160 |
| MS.gene50279.t1 | AT1G09490 | 32.727 | 330 | 199 | 8 | 8 | 329 | 8 | 322 | 7.25e-46 | 158 |
| MS.gene50279.t1 | AT1G15950 | 34.049 | 326 | 195 | 11 | 8 | 329 | 13 | 322 | 8.08e-45 | 156 |
| MS.gene50279.t1 | AT1G15950 | 34.049 | 326 | 195 | 11 | 8 | 329 | 13 | 322 | 8.08e-45 | 156 |
| MS.gene50279.t1 | AT1G76470 | 38.188 | 309 | 178 | 8 | 5 | 309 | 4 | 303 | 1.45e-44 | 155 |
| MS.gene50279.t1 | AT1G15950 | 34.076 | 314 | 188 | 10 | 8 | 317 | 13 | 311 | 1.38e-43 | 153 |
| MS.gene50279.t1 | AT1G09500 | 32.979 | 282 | 178 | 6 | 1 | 278 | 1 | 275 | 3.05e-43 | 150 |
| MS.gene50279.t1 | AT1G25460 | 30.275 | 327 | 208 | 7 | 10 | 329 | 6 | 319 | 5.20e-43 | 151 |
| MS.gene50279.t1 | AT1G09500 | 32.979 | 282 | 178 | 6 | 1 | 278 | 1 | 275 | 1.17e-42 | 150 |
| MS.gene50279.t1 | AT1G80820 | 33.435 | 329 | 201 | 11 | 4 | 329 | 4 | 317 | 1.95e-41 | 147 |
| MS.gene50279.t1 | AT1G15950 | 35.036 | 274 | 162 | 8 | 8 | 278 | 13 | 273 | 2.90e-40 | 142 |
| MS.gene50279.t1 | AT1G15950 | 35.036 | 274 | 162 | 8 | 8 | 278 | 13 | 273 | 3.84e-40 | 142 |
| MS.gene50279.t1 | AT2G33600 | 34.091 | 308 | 188 | 7 | 5 | 309 | 6 | 301 | 5.32e-40 | 143 |
| MS.gene50279.t1 | AT1G15950 | 35.036 | 274 | 162 | 8 | 8 | 278 | 13 | 273 | 7.36e-40 | 142 |
| MS.gene50279.t1 | AT1G80820 | 34.532 | 278 | 166 | 9 | 4 | 278 | 4 | 268 | 3.43e-37 | 134 |
| MS.gene50279.t1 | AT1G09490 | 29.730 | 296 | 187 | 7 | 42 | 329 | 9 | 291 | 1.26e-30 | 117 |
| MS.gene50279.t1 | AT1G09500 | 30.290 | 241 | 159 | 5 | 42 | 278 | 6 | 241 | 9.49e-28 | 110 |
| MS.gene50279.t1 | AT1G68540 | 29.545 | 220 | 146 | 5 | 113 | 329 | 1 | 214 | 9.23e-24 | 97.4 |
| MS.gene50279.t1 | AT2G23910 | 25.407 | 307 | 205 | 9 | 9 | 306 | 11 | 302 | 2.49e-22 | 95.5 |
| MS.gene50279.t1 | AT1G15950 | 31.878 | 229 | 143 | 8 | 105 | 329 | 5 | 224 | 1.46e-21 | 92.4 |
| MS.gene50279.t1 | AT2G23910 | 26.984 | 252 | 164 | 8 | 9 | 255 | 11 | 247 | 9.94e-21 | 90.5 |
| MS.gene50279.t1 | AT2G23910 | 26.984 | 252 | 164 | 8 | 9 | 255 | 11 | 247 | 1.01e-20 | 90.5 |
| MS.gene50279.t1 | AT4G30470 | 27.376 | 263 | 166 | 10 | 1 | 255 | 1 | 246 | 1.97e-19 | 87.4 |
| MS.gene50279.t1 | AT5G14700 | 28.417 | 278 | 158 | 12 | 1 | 255 | 46 | 305 | 9.42e-18 | 83.6 |
| MS.gene50279.t1 | AT5G14700 | 28.505 | 214 | 127 | 6 | 1 | 198 | 46 | 249 | 5.42e-17 | 80.5 |
Find 59 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACAGATGAAGGTATATT+AGG | 0.198356 | 4.4:-77447671 | None:intergenic |
| CCTTGTTGGATCTTCTTATT+TGG | 0.209176 | 4.4:+77447544 | MS.gene50279:CDS |
| TTTGAGTGTGAAAATGTTAA+TGG | 0.229940 | 4.4:+77448165 | MS.gene50279:CDS |
| GTTAGCTTCTTTGATGCTTC+TGG | 0.278137 | 4.4:-77447227 | None:intergenic |
| GTTAGATCACACCATGTTAA+AGG | 0.298991 | 4.4:+77445652 | MS.gene50279:CDS |
| TATGACTGAAAAGAGTGTTT+TGG | 0.313303 | 4.4:+77447577 | MS.gene50279:CDS |
| TTGGTTCTTCCTTTGGTTGT+TGG | 0.320036 | 4.4:+77447635 | MS.gene50279:CDS |
| TGTTAGTTTGGTTCTTCCTT+TGG | 0.331534 | 4.4:+77447628 | MS.gene50279:CDS |
| ATAGCACTCGCCATGATCTT+TGG | 0.336027 | 4.4:+77447695 | MS.gene50279:CDS |
| AACTTACTTTGGTATTGTTA+TGG | 0.339526 | 4.4:-77448265 | None:intergenic |
| TGAATTGAAGGTTGTTAGTT+TGG | 0.347694 | 4.4:+77447616 | MS.gene50279:CDS |
| CTTCTCTTTACAGCATTGTA+TGG | 0.353937 | 4.4:-77451154 | None:intergenic |
| AAACAGATGAAGGTATATTA+GGG | 0.372509 | 4.4:-77447670 | None:intergenic |
| TGTAAAAGTAGTAACCTTGT+TGG | 0.375771 | 4.4:+77447530 | MS.gene50279:CDS |
| AGGTATATTAGGGCAAATAA+AGG | 0.389280 | 4.4:-77447660 | None:intergenic |
| CATCCATTGGGTGTGCTAGA+TGG | 0.400667 | 4.4:-77447319 | None:intergenic |
| TGAGATACTTGTATCTATCT+TGG | 0.401199 | 4.4:-77448089 | None:intergenic |
| ATTTGTGTGACAGGAGCAAC+GGG | 0.426382 | 4.4:+77445568 | MS.gene50279:CDS |
| AGAGAAATGGAAAACGATAA+AGG | 0.427381 | 4.4:+77445541 | None:intergenic |
| AACATGCTTTCAAAATTCCT+AGG | 0.428586 | 4.4:-77447394 | None:intergenic |
| TTGCTTTGTCAAAGATATCC+AGG | 0.443021 | 4.4:+77448237 | MS.gene50279:CDS |
| CAAAACTACTTGAATCATCA+AGG | 0.450303 | 4.4:-77447265 | None:intergenic |
| AAACCAAGAGCCAGAAGAAA+AGG | 0.479277 | 4.4:+77447346 | MS.gene50279:CDS |
| TGGAAAAGTGAATGAATTGA+AGG | 0.484535 | 4.4:+77447604 | MS.gene50279:CDS |
| AAAGGTGCAATTTGTGTGAC+AGG | 0.486915 | 4.4:+77445559 | MS.gene50279:CDS |
| TGGCATCATGGCTGATTATG+AGG | 0.487871 | 4.4:+77445596 | MS.gene50279:CDS |
| GGTATATTAGGGCAAATAAA+GGG | 0.489769 | 4.4:-77447659 | None:intergenic |
| ATGTGGTGGATGAAGATGTT+TGG | 0.490382 | 4.4:+77447492 | MS.gene50279:CDS |
| GAAATACATACCAAAGATCA+TGG | 0.501496 | 4.4:-77447705 | None:intergenic |
| AAAGCAATACAAGGTTGCAT+TGG | 0.515168 | 4.4:+77447290 | MS.gene50279:CDS |
| TAAATTTGAACCCAGCATCC+AGG | 0.527299 | 4.4:-77451101 | None:intergenic |
| AGCGTCAAAGATATGTATGA+TGG | 0.533471 | 4.4:+77451129 | MS.gene50279:CDS |
| ACATGCTTTCAAAATTCCTA+GGG | 0.535454 | 4.4:-77447393 | None:intergenic |
| CAACGGGGTATGTGGCATCA+TGG | 0.536558 | 4.4:+77445584 | MS.gene50279:CDS |
| GACAGGAGCAACGGGGTATG+TGG | 0.543923 | 4.4:+77445576 | MS.gene50279:CDS |
| AGTGCTATATAAACAGATGA+AGG | 0.553611 | 4.4:-77447680 | None:intergenic |
| TTTAACATGGTGTGATCTAA+CGG | 0.553917 | 4.4:-77445650 | None:intergenic |
| CGTTATATATACCTTTAACA+TGG | 0.560160 | 4.4:-77445663 | None:intergenic |
| GGTATTGTTATGGTATACCC+TGG | 0.560996 | 4.4:-77448255 | None:intergenic |
| CAGAAATATAAGTGCACGAG+TGG | 0.561375 | 4.4:-77448142 | None:intergenic |
| AATTTGTGTGACAGGAGCAA+CGG | 0.567751 | 4.4:+77445567 | MS.gene50279:CDS |
| CATACAATGCTGTAAAGAGA+AGG | 0.570151 | 4.4:+77451155 | MS.gene50279:CDS |
| AGAGCAGTGGAAGGAACCCT+AGG | 0.577037 | 4.4:+77447377 | MS.gene50279:CDS |
| TTACACTTCTAGTGCAGCAA+CGG | 0.577130 | 4.4:+77447445 | MS.gene50279:CDS |
| GTATCTCACCAACTCATACA+TGG | 0.579056 | 4.4:+77448104 | MS.gene50279:CDS |
| TTTCCATCTAGCACACCCAA+TGG | 0.583542 | 4.4:+77447316 | MS.gene50279:CDS |
| ATTATGAGGCTTCTTCAACA+TGG | 0.593545 | 4.4:+77445610 | MS.gene50279:CDS |
| TTGAATCATCAAGGTCAGCA+TGG | 0.593822 | 4.4:-77447256 | None:intergenic |
| ATAAAGGGACCAACAACCAA+AGG | 0.611130 | 4.4:-77447644 | None:intergenic |
| AGTGTGAAAATGTTAATGGA+AGG | 0.611428 | 4.4:+77448169 | MS.gene50279:CDS |
| TGCTTTGTCAAAGATATCCA+GGG | 0.611825 | 4.4:+77448238 | MS.gene50279:CDS |
| ATACAATGCTGTAAAGAGAA+GGG | 0.620211 | 4.4:+77451156 | MS.gene50279:CDS |
| TGATAAGAATCTTGATGTGG+TGG | 0.620407 | 4.4:+77447478 | MS.gene50279:CDS |
| ATGAAATGATATTCTGTCTG+AGG | 0.636261 | 4.4:-77448202 | None:intergenic |
| CCAAATAAGAAGATCCAACA+AGG | 0.649216 | 4.4:-77447544 | None:intergenic |
| TGTGTGCACCATGTATGAGT+TGG | 0.669747 | 4.4:-77448112 | None:intergenic |
| CAATGATAAGAATCTTGATG+TGG | 0.698025 | 4.4:+77447475 | MS.gene50279:CDS |
| AACATGGTGTGATCTAACGG+TGG | 0.723533 | 4.4:-77445647 | None:intergenic |
| TTTGTGTGACAGGAGCAACG+GGG | 0.846000 | 4.4:+77445569 | MS.gene50279:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAACAAAATATTGTTA+AGG | + | chr4.4:77448862-77448881 | MS.gene50279:intron | 10.0% |
| !!! | AATATTTTTTTTGTGTAAAT+CGG | - | chr4.4:77447866-77447885 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATAATTTACTAG+CGG | + | chr4.4:77448699-77448718 | MS.gene50279:intron | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | + | chr4.4:77448443-77448462 | MS.gene50279:intron | 10.0% |
| !!! | CTATTTGTATTTAAAATTAA+GGG | + | chr4.4:77450338-77450357 | MS.gene50279:intron | 10.0% |
| !! | AAAAAATATGAAACTTACTT+TGG | - | chr4.4:77448279-77448298 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | + | chr4.4:77450632-77450651 | MS.gene50279:intron | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | + | chr4.4:77450633-77450652 | MS.gene50279:intron | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | - | chr4.4:77448442-77448461 | None:intergenic | 15.0% |
| !! | AAATCTAAATAATGTATCTT+TGG | - | chr4.4:77450933-77450952 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAAAATTGC+AGG | + | chr4.4:77450572-77450591 | MS.gene50279:intron | 15.0% |
| !! | AACTATAAAAAAAAAATTGC+AGG | - | chr4.4:77450591-77450572 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | - | chr4.4:77448441-77448460 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAATTGCA+GGG | + | chr4.4:77450573-77450592 | MS.gene50279:intron | 15.0% |
| !! | ACTATAAAAAAAAAATTGCA+GGG | - | chr4.4:77450592-77450573 | None:intergenic | 15.0% |
| !! | AGGCAAAATATTATTAAATA+GGG | + | chr4.4:77447934-77447953 | MS.gene50279:intron | 15.0% |
| !! | ATAAATTAGTGAATTATGTA+AGG | + | chr4.4:77445823-77445842 | MS.gene50279:intron | 15.0% |
| !! | ATATATATTAGGCTAAAATA+TGG | - | chr4.4:77450697-77450716 | None:intergenic | 15.0% |
| !! | CAAAAAATATTGTTAAAGAT+TGG | - | chr4.4:77449749-77449768 | None:intergenic | 15.0% |
| !! | CAATGACTTAATTAATATAT+AGG | + | chr4.4:77448366-77448385 | MS.gene50279:intron | 15.0% |
| !! | TAAAAATAAATTCTCATACA+AGG | - | chr4.4:77445933-77445952 | None:intergenic | 15.0% |
| !! | TAGGCAAAATATTATTAAAT+AGG | + | chr4.4:77447933-77447952 | MS.gene50279:intron | 15.0% |
| !! | TATATCTCAAATATTAGAAT+TGG | - | chr4.4:77448007-77448026 | None:intergenic | 15.0% |
| !! | TTAAAGTAAGAATAAAAAGA+AGG | - | chr4.4:77446364-77446383 | None:intergenic | 15.0% |
| !! | TTAATATATAGGCTAAAATA+TGG | + | chr4.4:77448377-77448396 | MS.gene50279:intron | 15.0% |
| !! | TTAGTCATATCATATATATT+AGG | - | chr4.4:77450708-77450727 | None:intergenic | 15.0% |
| !! | TTTATGTCATAATAATCAAT+GGG | - | chr4.4:77446713-77446732 | None:intergenic | 15.0% |
| !!! | ATATACATTTTTTTTACCTA+AGG | + | chr4.4:77447748-77447767 | MS.gene50279:intron | 15.0% |
| !!! | ATATTTTTTTTGTGTAAATC+GGG | - | chr4.4:77447865-77447884 | None:intergenic | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | - | chr4.4:77450632-77450651 | None:intergenic | 15.0% |
| !!! | GCTATTTGTATTTAAAATTA+AGG | + | chr4.4:77450337-77450356 | MS.gene50279:intron | 15.0% |
| !!! | TAAATTATCCAATTTTTTAC+TGG | - | chr4.4:77446600-77446619 | None:intergenic | 15.0% |
| !!! | TGTTACTAATATTTTATTAG+AGG | + | chr4.4:77449654-77449673 | MS.gene50279:intron | 15.0% |
| !!! | TTGTTACTATTTTTTTTTAG+TGG | + | chr4.4:77449776-77449795 | MS.gene50279:intron | 15.0% |
| !!! | TTTAAAATTAAGGGTATTTT+TGG | + | chr4.4:77450347-77450366 | MS.gene50279:intron | 15.0% |
| !!! | TTTTATGTCATAATAATCAA+TGG | - | chr4.4:77446714-77446733 | None:intergenic | 15.0% |
| !!! | TTTTTTCATCTTACAAATAT+TGG | + | chr4.4:77446171-77446190 | MS.gene50279:intron | 15.0% |
| !! | AAAATAATCACCCAAAAATT+AGG | - | chr4.4:77451020-77451039 | None:intergenic | 20.0% |
| !! | AATAGCAAAATTTAGTCTAA+CGG | + | chr4.4:77449249-77449268 | MS.gene50279:intron | 20.0% |
| !! | GGCAAAATATTATTAAATAG+GGG | + | chr4.4:77447935-77447954 | MS.gene50279:intron | 20.0% |
| !! | TAAAAAATTAGAAAGTTCCA+AGG | - | chr4.4:77450123-77450142 | None:intergenic | 20.0% |
| !! | TTTGTTAGTTATCAAAATTG+AGG | + | chr4.4:77445793-77445812 | MS.gene50279:intron | 20.0% |
| !!! | AAATTGGATAATTTAAAGTG+TGG | + | chr4.4:77446605-77446624 | MS.gene50279:intron | 20.0% |
| !!! | AGTATCTTTAATTTGTTGTA+GGG | - | chr4.4:77446340-77446359 | None:intergenic | 20.0% |
| !!! | AGTTTTTAACAAAATTATGG+TGG | + | chr4.4:77450884-77450903 | MS.gene50279:intron | 20.0% |
| !!! | ATATATAACGTTCATTTTCT+TGG | + | chr4.4:77445676-77445695 | MS.gene50279:intron | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+GGG | + | chr4.4:77450543-77450562 | MS.gene50279:intron | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+GGG | - | chr4.4:77450562-77450543 | None:intergenic | 20.0% |
| !!! | CGTAGTTTTTAACAAAATTA+TGG | + | chr4.4:77450881-77450900 | MS.gene50279:intron | 20.0% |
| !!! | GATGTTTTTATTGCTTTAAA+CGG | - | chr4.4:77449409-77449428 | None:intergenic | 20.0% |
| !!! | TAGTATCTTTAATTTGTTGT+AGG | - | chr4.4:77446341-77446360 | None:intergenic | 20.0% |
| !!! | TATCTAAGACATTACAAAAA+TGG | - | chr4.4:77446549-77446568 | None:intergenic | 20.0% |
| !!! | TTGCTATTCTTTTGTTTAAT+TGG | + | chr4.4:77445728-77445747 | MS.gene50279:intron | 20.0% |
| !!! | TTTTTTACTAATTTAGACCA+TGG | + | chr4.4:77448299-77448318 | MS.gene50279:intron | 20.0% |
| ! | AAATAAATTCTCATACAAGG+TGG | - | chr4.4:77445930-77445949 | None:intergenic | 25.0% |
| ! | AACTTACTTTGGTATTGTTA+TGG | - | chr4.4:77448268-77448287 | None:intergenic | 25.0% |
| ! | AAGATATTCAATTCATGAAG+TGG | + | chr4.4:77450042-77450061 | MS.gene50279:intron | 25.0% |
| ! | AATTATAGTAGCAATTCCTT+CGG | - | chr4.4:77447044-77447063 | None:intergenic | 25.0% |
| ! | ACAAAACTTCTCATTAAAGA+AGG | - | chr4.4:77449110-77449129 | None:intergenic | 25.0% |
| ! | ACCATAAATATAAGTCACAA+GGG | - | chr4.4:77449229-77449248 | None:intergenic | 25.0% |
| ! | AGTTCAATGAAGACAAAAAA+TGG | + | chr4.4:77451042-77451061 | MS.gene50279:intron | 25.0% |
| ! | ATAGCAAAATTTAGTCTAAC+GGG | + | chr4.4:77449250-77449269 | MS.gene50279:intron | 25.0% |
| ! | ATATGTGCTATGTTTATTAC+AGG | + | chr4.4:77448063-77448082 | MS.gene50279:intron | 25.0% |
| ! | ATTAAAGAAGGGAAAATAGA+AGG | - | chr4.4:77449098-77449117 | None:intergenic | 25.0% |
| ! | ATTAGGCTAAAATATGGTAT+TGG | - | chr4.4:77450691-77450710 | None:intergenic | 25.0% |
| ! | CAAAACTTCTCATTAAAGAA+GGG | - | chr4.4:77449109-77449128 | None:intergenic | 25.0% |
| ! | CAAAGTTTGAATTGTAATGT+TGG | + | chr4.4:77449987-77450006 | MS.gene50279:intron | 25.0% |
| ! | CATATATGAAAACAAAGTGT+TGG | - | chr4.4:77446960-77446979 | None:intergenic | 25.0% |
| ! | CATTGAATGGAATATCTTTA+AGG | - | chr4.4:77450069-77450088 | None:intergenic | 25.0% |
| ! | CGTTATATATACCTTTAACA+TGG | - | chr4.4:77445666-77445685 | None:intergenic | 25.0% |
| ! | CTTAAAGATATTCCATTCAA+TGG | + | chr4.4:77450067-77450086 | MS.gene50279:intron | 25.0% |
| ! | TAATGTATCTTTGGTTAGAT+TGG | - | chr4.4:77450924-77450943 | None:intergenic | 25.0% |
| ! | TACCATAAATATAAGTCACA+AGG | - | chr4.4:77449230-77449249 | None:intergenic | 25.0% |
| ! | TATAGGCTAAAATATGGTAT+TGG | + | chr4.4:77448383-77448402 | MS.gene50279:intron | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | - | chr4.4:77448632-77448651 | None:intergenic | 25.0% |
| ! | TGTATTCTTATTCTCTCTAT+TGG | - | chr4.4:77446815-77446834 | None:intergenic | 25.0% |
| ! | TTTGAGTGTGAAAATGTTAA+TGG | + | chr4.4:77448165-77448184 | MS.gene50279:CDS | 25.0% |
| ! | TTTGTATATAAAGAGAATCG+TGG | + | chr4.4:77449316-77449335 | MS.gene50279:intron | 25.0% |
| !! | AAACAGATGAAGGTATATTA+GGG | - | chr4.4:77447673-77447692 | None:intergenic | 25.0% |
| !! | ATTAGTCTAAGTAAAGATGA+AGG | - | chr4.4:77446520-77446539 | None:intergenic | 25.0% |
| !! | CCAAAAACAAAAATTTTTGC+AGG | + | chr4.4:77450542-77450561 | MS.gene50279:intron | 25.0% |
| !! | CCAAAAACAAAAATTTTTGC+AGG | - | chr4.4:77450561-77450542 | None:intergenic | 25.0% |
| !! | TAAACAGATGAAGGTATATT+AGG | - | chr4.4:77447674-77447693 | None:intergenic | 25.0% |
| !!! | AAACTTTTTGTTTGAGTTTG+AGG | - | chr4.4:77446260-77446279 | None:intergenic | 25.0% |
| !!! | AGTCTACACAATGTATTTTT+TGG | + | chr4.4:77448343-77448362 | MS.gene50279:intron | 25.0% |
| !!! | AGTTTTGAAAAAGCAATACA+AGG | + | chr4.4:77447281-77447300 | MS.gene50279:CDS | 25.0% |
| !!! | CCTGCAAAAATTTTTGTTTT+TGG | + | chr4.4:77448592-77448611 | MS.gene50279:intron | 25.0% |
| !!! | CCTGCAAAAATTTTTGTTTT+TGG | - | chr4.4:77448611-77448592 | None:intergenic | 25.0% |
| !!! | GGAACTTTCTAATTTTTTAG+AGG | + | chr4.4:77450124-77450143 | MS.gene50279:intron | 25.0% |
| !!! | TATCCTTTGCTATAAGTTTT+AGG | - | chr4.4:77447971-77447990 | None:intergenic | 25.0% |
| !!! | TCCACGTGTTATTTTATAAT+TGG | + | chr4.4:77450315-77450334 | MS.gene50279:intron | 25.0% |
| !!! | TGAGTTTGATTTGTTGTTAA+CGG | + | chr4.4:77450246-77450265 | MS.gene50279:intron | 25.0% |
| !!! | TTATATGTAGCTTTATCAAG+AGG | - | chr4.4:77449149-77449168 | None:intergenic | 25.0% |
| AAAGGGTTTGTCTAACTTTA+TGG | + | chr4.4:77446306-77446325 | MS.gene50279:intron | 30.0% | |
| AACATGCTTTCAAAATTCCT+AGG | - | chr4.4:77447397-77447416 | None:intergenic | 30.0% | |
| ACATGCTTTCAAAATTCCTA+GGG | - | chr4.4:77447396-77447415 | None:intergenic | 30.0% | |
| AGGTATATTAGGGCAAATAA+AGG | - | chr4.4:77447663-77447682 | None:intergenic | 30.0% | |
| AGTGCTATATAAACAGATGA+AGG | - | chr4.4:77447683-77447702 | None:intergenic | 30.0% | |
| AGTGTGAAAATGTTAATGGA+AGG | + | chr4.4:77448169-77448188 | MS.gene50279:CDS | 30.0% | |
| AGTTTGAATTGTAATGTTGG+CGG | + | chr4.4:77449990-77450009 | MS.gene50279:intron | 30.0% | |
| ATAAGAAACATGTGTGGTTT+AGG | + | chr4.4:77446932-77446951 | MS.gene50279:intron | 30.0% | |
| ATAATTTACTAGCGGAAAGA+CGG | + | chr4.4:77448707-77448726 | MS.gene50279:intron | 30.0% | |
| ATACAATGCTGTAAAGAGAA+GGG | + | chr4.4:77451156-77451175 | MS.gene50279:CDS | 30.0% | |
| ATCAAAGACAGTGAAAAAAG+TGG | + | chr4.4:77447421-77447440 | MS.gene50279:CDS | 30.0% | |
| ATCTTTATAATTGTTGAGGG+AGG | + | chr4.4:77445865-77445884 | MS.gene50279:intron | 30.0% | |
| ATGAAATGATATTCTGTCTG+AGG | - | chr4.4:77448205-77448224 | None:intergenic | 30.0% | |
| ATTATAGTAGCAATTCCTTC+GGG | - | chr4.4:77447043-77447062 | None:intergenic | 30.0% | |
| ATTTATAGTCCAATCCTCAT+CGG | + | chr4.4:77449799-77449818 | MS.gene50279:intron | 30.0% | |
| CAAAAAGTTTAAGTGTGAGT+TGG | + | chr4.4:77446270-77446289 | MS.gene50279:intron | 30.0% | |
| CAAAACTACTTGAATCATCA+AGG | - | chr4.4:77447268-77447287 | None:intergenic | 30.0% | |
| CAACATATGAATTGAGAGTT+TGG | + | chr4.4:77446115-77446134 | MS.gene50279:intron | 30.0% | |
| CAATGATAAGAATCTTGATG+TGG | + | chr4.4:77447475-77447494 | MS.gene50279:CDS | 30.0% | |
| CATTGTGTAGACTAATTTGA+CGG | - | chr4.4:77448336-77448355 | None:intergenic | 30.0% | |
| CTACTCAACCAGTAAAAAAT+TGG | + | chr4.4:77446589-77446608 | MS.gene50279:intron | 30.0% | |
| GAAATACATACCAAAGATCA+TGG | - | chr4.4:77447708-77447727 | None:intergenic | 30.0% | |
| GACAAATCATCACATAATTG+GGG | - | chr4.4:77448631-77448650 | None:intergenic | 30.0% | |
| GATGAGAAAAAGAAATGGAA+GGG | + | chr4.4:77445897-77445916 | MS.gene50279:intron | 30.0% | |
| GCAGGAAAAAACATAAACTT+TGG | + | chr4.4:77449877-77449896 | MS.gene50279:intron | 30.0% | |
| GCCAATTATAAAATAACACG+TGG | - | chr4.4:77450319-77450338 | None:intergenic | 30.0% | |
| GGGATCTTTATAATTGTTGA+GGG | + | chr4.4:77445862-77445881 | MS.gene50279:intron | 30.0% | |
| GGTATATTAGGGCAAATAAA+GGG | - | chr4.4:77447662-77447681 | None:intergenic | 30.0% | |
| GTGACAAATCATCACATAAT+TGG | - | chr4.4:77448633-77448652 | None:intergenic | 30.0% | |
| GTTCCTAAAACTTATAGCAA+AGG | + | chr4.4:77447965-77447984 | MS.gene50279:intron | 30.0% | |
| GTTTGTCTAACTTTATGGTT+GGG | + | chr4.4:77446311-77446330 | MS.gene50279:intron | 30.0% | |
| TAACAAACGTGAGCAAATAT+TGG | - | chr4.4:77449500-77449519 | None:intergenic | 30.0% | |
| TAAGAAACATGTGTGGTTTA+GGG | + | chr4.4:77446933-77446952 | MS.gene50279:intron | 30.0% | |
| TGAATTGAAGGTTGTTAGTT+TGG | + | chr4.4:77447616-77447635 | MS.gene50279:CDS | 30.0% | |
| TGACAAATCATCACATAACT+GGG | + | chr4.4:77450505-77450524 | MS.gene50279:intron | 30.0% | |
| TGAGATACTTGTATCTATCT+TGG | - | chr4.4:77448092-77448111 | None:intergenic | 30.0% | |
| TGATGAGAAAAAGAAATGGA+AGG | + | chr4.4:77445896-77445915 | MS.gene50279:intron | 30.0% | |
| TGGAAAAGTGAATGAATTGA+AGG | + | chr4.4:77447604-77447623 | MS.gene50279:CDS | 30.0% | |
| TGGGATCTTTATAATTGTTG+AGG | + | chr4.4:77445861-77445880 | MS.gene50279:intron | 30.0% | |
| TGTAAAAGTAGTAACCTTGT+TGG | + | chr4.4:77447530-77447549 | MS.gene50279:CDS | 30.0% | |
| TTATATACAAATGCGAGTTC+AGG | - | chr4.4:77449307-77449326 | None:intergenic | 30.0% | |
| TTTAACATGGTGTGATCTAA+CGG | - | chr4.4:77445653-77445672 | None:intergenic | 30.0% | |
| ! | AAAAAGCCTAGCCTAATTTT+TGG | + | chr4.4:77451006-77451025 | MS.gene50279:intron | 30.0% |
| ! | AAAAGCCTAGCCTAATTTTT+GGG | + | chr4.4:77451007-77451026 | MS.gene50279:intron | 30.0% |
| ! | TGTTTTCTACTAACCACAAA+GGG | + | chr4.4:77449277-77449296 | MS.gene50279:intron | 30.0% |
| ! | TTGTTTGAGTTTGAGGAAAA+GGG | - | chr4.4:77446253-77446272 | None:intergenic | 30.0% |
| ! | TTTGTTTGAGTTTGAGGAAA+AGG | - | chr4.4:77446254-77446273 | None:intergenic | 30.0% |
| !! | AGGAATTTTGAAAGCATGTT+TGG | + | chr4.4:77447397-77447416 | MS.gene50279:CDS | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr4.4:77450605-77450624 | MS.gene50279:intron | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr4.4:77450624-77450605 | None:intergenic | 30.0% |
| !!! | AAGGAGTTGATGTTTTGTTT+GGG | + | chr4.4:77445842-77445861 | MS.gene50279:intron | 30.0% |
| !!! | TAAGGAGTTGATGTTTTGTT+TGG | + | chr4.4:77445841-77445860 | MS.gene50279:intron | 30.0% |
| !!! | TATGACTGAAAAGAGTGTTT+TGG | + | chr4.4:77447577-77447596 | MS.gene50279:CDS | 30.0% |
| !!! | TTTTTTTTACCTAAGGTCCT+AGG | + | chr4.4:77447755-77447774 | MS.gene50279:intron | 30.0% |
| AAACGTGAGCAAATATTGGA+TGG | - | chr4.4:77449496-77449515 | None:intergenic | 35.0% | |
| AAAGCAATACAAGGTTGCAT+TGG | + | chr4.4:77447290-77447309 | MS.gene50279:CDS | 35.0% | |
| AACAAAAACAATAGCCGATG+AGG | - | chr4.4:77449816-77449835 | None:intergenic | 35.0% | |
| AACCACACATGTTTCTTATG+AGG | - | chr4.4:77446931-77446950 | None:intergenic | 35.0% | |
| AACGTGAGCAAATATTGGAT+GGG | - | chr4.4:77449495-77449514 | None:intergenic | 35.0% | |
| AAGAGAGTGAAAACTCACTT+GGG | + | chr4.4:77446834-77446853 | MS.gene50279:intron | 35.0% | |
| AATCACCCAAAAATTAGGCT+AGG | - | chr4.4:77451015-77451034 | None:intergenic | 35.0% | |
| AGCGTCAAAGATATGTATGA+TGG | + | chr4.4:77451129-77451148 | MS.gene50279:CDS | 35.0% | |
| ATAATTGTTGAGGGAGGAAA+GGG | + | chr4.4:77445871-77445890 | MS.gene50279:intron | 35.0% | |
| ATTATGAGGCTTCTTCAACA+TGG | + | chr4.4:77445610-77445629 | MS.gene50279:CDS | 35.0% | |
| CATACAATGCTGTAAAGAGA+AGG | + | chr4.4:77451155-77451174 | MS.gene50279:CDS | 35.0% | |
| CATCATCTTTGTGTATTTCC+AGG | + | chr4.4:77446434-77446453 | MS.gene50279:intron | 35.0% | |
| CCAAATAAGAAGATCCAACA+AGG | - | chr4.4:77447547-77447566 | None:intergenic | 35.0% | |
| CCTTGTTGGATCTTCTTATT+TGG | + | chr4.4:77447544-77447563 | MS.gene50279:CDS | 35.0% | |
| CTAAAGCTAAGAGAGACTTT+AGG | + | chr4.4:77445762-77445781 | MS.gene50279:intron | 35.0% | |
| CTGTAATGTCCCAATTTCAT+CGG | + | chr4.4:77447012-77447031 | MS.gene50279:intron | 35.0% | |
| CTTCTCTTTACAGCATTGTA+TGG | - | chr4.4:77451157-77451176 | None:intergenic | 35.0% | |
| GAAGAGTTTGTCATCCATTT+GGG | + | chr4.4:77447821-77447840 | MS.gene50279:intron | 35.0% | |
| GACAAATCATCACATAACTG+GGG | + | chr4.4:77450506-77450525 | MS.gene50279:intron | 35.0% | |
| GCCCTTGTGACTTATATTTA+TGG | + | chr4.4:77449225-77449244 | MS.gene50279:intron | 35.0% | |
| GGCTTGATGAGAAAAAGAAA+TGG | + | chr4.4:77445892-77445911 | MS.gene50279:intron | 35.0% | |
| GGTTTGTCTAACTTTATGGT+TGG | + | chr4.4:77446310-77446329 | MS.gene50279:intron | 35.0% | |
| GTGACAAATCATCACATAAC+TGG | + | chr4.4:77450504-77450523 | MS.gene50279:intron | 35.0% | |
| GTTAGATCACACCATGTTAA+AGG | + | chr4.4:77445652-77445671 | MS.gene50279:CDS | 35.0% | |
| GTTGAGTAGCATTGCATATA+TGG | - | chr4.4:77446578-77446597 | None:intergenic | 35.0% | |
| TAAATTCTCATACAAGGTGG+TGG | - | chr4.4:77445927-77445946 | None:intergenic | 35.0% | |
| TAATTTACTAGCGGAAAGAC+GGG | + | chr4.4:77448708-77448727 | MS.gene50279:intron | 35.0% | |
| TATAATTGTTGAGGGAGGAA+AGG | + | chr4.4:77445870-77445889 | MS.gene50279:intron | 35.0% | |
| TCTATCATCAAAAAAGCTCC+TGG | + | chr4.4:77451083-77451102 | MS.gene50279:CDS | 35.0% | |
| TGACTTCGACAAAATCATAG+TGG | + | chr4.4:77450831-77450850 | MS.gene50279:intron | 35.0% | |
| TGATAAGAATCTTGATGTGG+TGG | + | chr4.4:77447478-77447497 | MS.gene50279:CDS | 35.0% | |
| TGCTTTGTCAAAGATATCCA+GGG | + | chr4.4:77448238-77448257 | MS.gene50279:CDS | 35.0% | |
| TTAAGCAGGAAGAAGGAAAA+AGG | - | chr4.4:77446225-77446244 | None:intergenic | 35.0% | |
| TTGCTTTGTCAAAGATATCC+AGG | + | chr4.4:77448237-77448256 | MS.gene50279:CDS | 35.0% | |
| TTGGACCATATCCTTGAAAA+GGG | + | chr4.4:77446289-77446308 | MS.gene50279:intron | 35.0% | |
| ! | AACCCAAAAGTGTGTTGAAA+GGG | + | chr4.4:77450382-77450401 | MS.gene50279:intron | 35.0% |
| ! | AGTTAGACAAACCCTTTTCA+AGG | - | chr4.4:77446303-77446322 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr4.4:77448531-77448550 | MS.gene50279:intron | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr4.4:77448550-77448531 | None:intergenic | 35.0% |
| ! | CTGTTTTCTACTAACCACAA+AGG | + | chr4.4:77449276-77449295 | MS.gene50279:intron | 35.0% |
| ! | CTTTTTGTCACCTTTTCTTC+TGG | - | chr4.4:77447359-77447378 | None:intergenic | 35.0% |
| ! | TCTTTCTGTTTTATCCTTCG+AGG | - | chr4.4:77450026-77450045 | None:intergenic | 35.0% |
| ! | TTTATTGCTTTAAACGGCAG+TGG | - | chr4.4:77449403-77449422 | None:intergenic | 35.0% |
| !! | ACAAACCCTTTTCAAGGATA+TGG | - | chr4.4:77446297-77446316 | None:intergenic | 35.0% |
| !! | ACAAGAGCGTTAAAACTCTT+CGG | + | chr4.4:77447799-77447818 | MS.gene50279:intron | 35.0% |
| !! | GAGGGTATTATGATGAATTC+TGG | + | chr4.4:77450163-77450182 | MS.gene50279:intron | 35.0% |
| !! | GTTTGATTTGTTGTTAACGG+TGG | + | chr4.4:77450249-77450268 | MS.gene50279:intron | 35.0% |
| !! | TGTTAGTTTGGTTCTTCCTT+TGG | + | chr4.4:77447628-77447647 | MS.gene50279:CDS | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr4.4:77448521-77448540 | MS.gene50279:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr4.4:77448540-77448521 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr4.4:77450604-77450623 | MS.gene50279:intron | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr4.4:77450623-77450604 | None:intergenic | 35.0% |
| !!! | GAAAAGAGTGTTTTGGAGTT+TGG | + | chr4.4:77447584-77447603 | MS.gene50279:CDS | 35.0% |
| !!! | TTGTCACTTTTGTGCATATG+TGG | + | chr4.4:77448646-77448665 | MS.gene50279:intron | 35.0% |
| AAACAATAGCCGATGAGGAT+TGG | - | chr4.4:77449811-77449830 | None:intergenic | 40.0% | |
| AAACCAAGAGCCAGAAGAAA+AGG | + | chr4.4:77447346-77447365 | MS.gene50279:CDS | 40.0% | |
| AAAGGTGACAAAAAGAGCAG+TGG | + | chr4.4:77447364-77447383 | MS.gene50279:CDS | 40.0% | |
| AAATATTGGATGGGGGTCAT+GGG | - | chr4.4:77449486-77449505 | None:intergenic | 40.0% | |
| AATTTGTGTGACAGGAGCAA+CGG | + | chr4.4:77445567-77445586 | MS.gene50279:CDS | 40.0% | |
| ACGTGAGCAAATATTGGATG+GGG | - | chr4.4:77449494-77449513 | None:intergenic | 40.0% | |
| AGACTCGTGAGAAATAAAGC+AGG | + | chr4.4:77449859-77449878 | MS.gene50279:intron | 40.0% | |
| ATAAAGGGACCAACAACCAA+AGG | - | chr4.4:77447647-77447666 | None:intergenic | 40.0% | |
| ATCATCACATAACTGGGGTT+AGG | + | chr4.4:77450511-77450530 | MS.gene50279:intron | 40.0% | |
| CAAAGTTACTAGCCCATTAC+AGG | + | chr4.4:77446902-77446921 | MS.gene50279:intron | 40.0% | |
| CAAGAGAGTGAAAACTCACT+TGG | + | chr4.4:77446833-77446852 | MS.gene50279:intron | 40.0% | |
| CACAATTTCGTCATTCTTCC+TGG | - | chr4.4:77446455-77446474 | None:intergenic | 40.0% | |
| CACACATGTTTCTTATGAGG+TGG | - | chr4.4:77446928-77446947 | None:intergenic | 40.0% | |
| CACCTCATAAGAAACATGTG+TGG | + | chr4.4:77446926-77446945 | MS.gene50279:intron | 40.0% | |
| CAGAAATATAAGTGCACGAG+TGG | - | chr4.4:77448145-77448164 | None:intergenic | 40.0% | |
| GGAAGAGTTTGTCATCCATT+TGG | + | chr4.4:77447820-77447839 | MS.gene50279:intron | 40.0% | |
| GGAAGATATATTCCGACGTT+GGG | + | chr4.4:77449194-77449213 | MS.gene50279:intron | 40.0% | |
| GGTATTGTTATGGTATACCC+TGG | - | chr4.4:77448258-77448277 | None:intergenic | 40.0% | |
| GTATCTCACCAACTCATACA+TGG | + | chr4.4:77448104-77448123 | MS.gene50279:CDS | 40.0% | |
| GTTGGACCATATCCTTGAAA+AGG | + | chr4.4:77446288-77446307 | MS.gene50279:intron | 40.0% | |
| TAAATTTGAACCCAGCATCC+AGG | - | chr4.4:77451104-77451123 | None:intergenic | 40.0% | |
| TCATCACATAACTGGGGTTA+GGG | + | chr4.4:77450512-77450531 | MS.gene50279:intron | 40.0% | |
| TCATCACATAATTGGGGTCA+TGG | - | chr4.4:77448625-77448644 | None:intergenic | 40.0% | |
| TCATGACTGAAAACATGTCG+TGG | + | chr4.4:77449173-77449192 | MS.gene50279:intron | 40.0% | |
| TGACGGAGTTTACAATTCCA+TGG | - | chr4.4:77448319-77448338 | None:intergenic | 40.0% | |
| TGGAAGATATATTCCGACGT+TGG | + | chr4.4:77449193-77449212 | MS.gene50279:intron | 40.0% | |
| TGTCTAACTTTATGGTTGGG+CGG | + | chr4.4:77446314-77446333 | MS.gene50279:intron | 40.0% | |
| TTAATCAAGTTCGTGAGCCT+TGG | + | chr4.4:77450103-77450122 | MS.gene50279:intron | 40.0% | |
| TTACACTTCTAGTGCAGCAA+CGG | + | chr4.4:77447445-77447464 | MS.gene50279:CDS | 40.0% | |
| TTGAATCATCAAGGTCAGCA+TGG | - | chr4.4:77447259-77447278 | None:intergenic | 40.0% | |
| ! | AAAACTGGCCTGTATTTGCA+GGG | - | chr4.4:77448470-77448489 | None:intergenic | 40.0% |
| ! | AAAGGTGCAATTTGTGTGAC+AGG | + | chr4.4:77445559-77445578 | MS.gene50279:CDS | 40.0% |
| ! | ACCCAAAAGTGTGTTGAAAG+GGG | + | chr4.4:77450383-77450402 | MS.gene50279:intron | 40.0% |
| ! | ACCCCTTTCAACACACTTTT+GGG | - | chr4.4:77450387-77450406 | None:intergenic | 40.0% |
| ! | CAACCCAAAAGTGTGTTGAA+AGG | + | chr4.4:77450381-77450400 | MS.gene50279:intron | 40.0% |
| ! | GGAAAAGGGCAATTTTAAGC+AGG | - | chr4.4:77446239-77446258 | None:intergenic | 40.0% |
| ! | GGCAATTTTAAGCAGGAAGA+AGG | - | chr4.4:77446232-77446251 | None:intergenic | 40.0% |
| ! | GTTAGCTTCTTTGATGCTTC+TGG | - | chr4.4:77447230-77447249 | None:intergenic | 40.0% |
| ! | TACCCCTTTCAACACACTTT+TGG | - | chr4.4:77450388-77450407 | None:intergenic | 40.0% |
| ! | TTGGTTCTTCCTTTGGTTGT+TGG | + | chr4.4:77447635-77447654 | MS.gene50279:CDS | 40.0% |
| !! | ACTTCTGAAGCACCATTGAA+TGG | - | chr4.4:77450082-77450101 | None:intergenic | 40.0% |
| !! | ATGTGGTGGATGAAGATGTT+TGG | + | chr4.4:77447492-77447511 | MS.gene50279:CDS | 40.0% |
| !! | CAAAACTGGCCTATTTTGCA+GGG | + | chr4.4:77450664-77450683 | MS.gene50279:intron | 40.0% |
| !! | CAAAACTGGCCTATTTTGCA+GGG | - | chr4.4:77450683-77450664 | None:intergenic | 40.0% |
| !! | CTTTCAACACACTTTTGGGT+TGG | - | chr4.4:77450383-77450402 | None:intergenic | 40.0% |
| !! | TTTTTGGTCCCTGCAAATAC+AGG | + | chr4.4:77448459-77448478 | MS.gene50279:intron | 40.0% |
| !!! | CTTGGTTTTGCACATCCATT+GGG | - | chr4.4:77447334-77447353 | None:intergenic | 40.0% |
| !!! | TCTTGGTTTTGCACATCCAT+TGG | - | chr4.4:77447335-77447354 | None:intergenic | 40.0% |
| AACATGGTGTGATCTAACGG+TGG | - | chr4.4:77445650-77445669 | None:intergenic | 45.0% | |
| AGGTGATGAGATGTGATCAG+AGG | + | chr4.4:77450144-77450163 | MS.gene50279:intron | 45.0% | |
| ATAGCACTCGCCATGATCTT+TGG | + | chr4.4:77447695-77447714 | MS.gene50279:CDS | 45.0% | |
| ATTTCATCGGATGTTCCCGA+AGG | + | chr4.4:77447025-77447044 | MS.gene50279:intron | 45.0% | |
| ATTTGTGTGACAGGAGCAAC+GGG | + | chr4.4:77445568-77445587 | MS.gene50279:CDS | 45.0% | |
| CAAAAAAGCTCCTGGATGCT+GGG | + | chr4.4:77451091-77451110 | MS.gene50279:CDS | 45.0% | |
| CAAATATTGGATGGGGGTCA+TGG | - | chr4.4:77449487-77449506 | None:intergenic | 45.0% | |
| CGGGAACATCCGATGAAATT+GGG | - | chr4.4:77447024-77447043 | None:intergenic | 45.0% | |
| CGTGAGCAAATATTGGATGG+GGG | - | chr4.4:77449493-77449512 | None:intergenic | 45.0% | |
| CTTATGAGGTGGCCTGTAAT+GGG | - | chr4.4:77446917-77446936 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr4.4:77450590-77450609 | MS.gene50279:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr4.4:77450609-77450590 | None:intergenic | 45.0% | |
| GCGGAAAGTAAATTCCTCGA+AGG | + | chr4.4:77450009-77450028 | MS.gene50279:intron | 45.0% | |
| GCTCTTGTATGCTCAAGACT+AGG | - | chr4.4:77447787-77447806 | None:intergenic | 45.0% | |
| GGTGATGAGATGTGATCAGA+GGG | + | chr4.4:77450145-77450164 | MS.gene50279:intron | 45.0% | |
| GTGACAAAAAGAGCAGTGGA+AGG | + | chr4.4:77447368-77447387 | MS.gene50279:CDS | 45.0% | |
| TCAAAAAAGCTCCTGGATGC+TGG | + | chr4.4:77451090-77451109 | MS.gene50279:CDS | 45.0% | |
| TCAAGACTAGGTTCGAACCT+AGG | - | chr4.4:77447775-77447794 | None:intergenic | 45.0% | |
| TCGGGAACATCCGATGAAAT+TGG | - | chr4.4:77447025-77447044 | None:intergenic | 45.0% | |
| TCTTATGAGGTGGCCTGTAA+TGG | - | chr4.4:77446918-77446937 | None:intergenic | 45.0% | |
| TGGCATCATGGCTGATTATG+AGG | + | chr4.4:77445596-77445615 | MS.gene50279:CDS | 45.0% | |
| TGTGTGCACCATGTATGAGT+TGG | - | chr4.4:77448115-77448134 | None:intergenic | 45.0% | |
| TTTCCATCTAGCACACCCAA+TGG | + | chr4.4:77447316-77447335 | MS.gene50279:CDS | 45.0% | |
| ! | AAAACTCACTTGGGTTGTCC+TGG | + | chr4.4:77446843-77446862 | MS.gene50279:intron | 45.0% |
| ! | CAAAACTGGCCTGTATTTGC+AGG | - | chr4.4:77448471-77448490 | None:intergenic | 45.0% |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | + | chr4.4:77448408-77448427 | MS.gene50279:intron | 45.0% |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | - | chr4.4:77448427-77448408 | None:intergenic | 45.0% |
| ! | CTGCAAATACAGGCCAGTTT+TGG | + | chr4.4:77448469-77448488 | MS.gene50279:intron | 45.0% |
| ! | TTGCTTTAAACGGCAGTGGA+AGG | - | chr4.4:77449399-77449418 | None:intergenic | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | + | chr4.4:77450663-77450682 | MS.gene50279:intron | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | - | chr4.4:77450682-77450663 | None:intergenic | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr4.4:77448398-77448417 | MS.gene50279:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr4.4:77448417-77448398 | None:intergenic | 45.0% |
| !! | GTGGTATTGGCTTGTGATCT+GGG | + | chr4.4:77446865-77446884 | MS.gene50279:intron | 45.0% |
| !!! | TCACCTTTTCTTCTGGCTCT+TGG | - | chr4.4:77447352-77447371 | None:intergenic | 45.0% |
| !! | TTCTTTAATTATTAAATAAA+GGG | + | chr4.4:77449341-77449360 | MS.gene50279:intron | 5.0% |
| !! | TTTCTTTAATTATTAAATAA+AGG | + | chr4.4:77449340-77449359 | MS.gene50279:intron | 5.0% |
| !!! | AATTTTTTTTTTATAGTTTT+TGG | + | chr4.4:77448505-77448524 | MS.gene50279:intron | 5.0% |
| !!! | AATTTTTTTTTTATAGTTTT+TGG | - | chr4.4:77448524-77448505 | None:intergenic | 5.0% |
| !!! | TTTATTTCTTTATTTATTAT+AGG | + | chr4.4:77447914-77447933 | MS.gene50279:intron | 5.0% |
| AGGTTCGAACCTAGGACCTT+AGG | - | chr4.4:77447767-77447786 | None:intergenic | 50.0% | |
| AGTAGAAAGAGCGGACAGAC+GGG | - | chr4.4:77448744-77448763 | None:intergenic | 50.0% | |
| CAGTAGAAAGAGCGGACAGA+CGG | - | chr4.4:77448745-77448764 | None:intergenic | 50.0% | |
| CATCCATTGGGTGTGCTAGA+TGG | - | chr4.4:77447322-77447341 | None:intergenic | 50.0% | |
| CGTTAGCGCAGTAGAAAGAG+CGG | - | chr4.4:77448753-77448772 | None:intergenic | 50.0% | |
| GAGTTCAGGACTTCCCTTTG+TGG | - | chr4.4:77449293-77449312 | None:intergenic | 50.0% | |
| GATCACAAGCCAATACCACC+AGG | - | chr4.4:77446864-77446883 | None:intergenic | 50.0% | |
| GGGCATATCATTCCCAACGT+CGG | - | chr4.4:77449209-77449228 | None:intergenic | 50.0% | |
| TTTGTGTGACAGGAGCAACG+GGG | + | chr4.4:77445569-77445588 | MS.gene50279:CDS | 50.0% | |
| ! | TTGGGTTGTCCTGGTGGTAT+TGG | + | chr4.4:77446852-77446871 | MS.gene50279:intron | 50.0% |
| !! | GGTGGTATTGGCTTGTGATC+TGG | + | chr4.4:77446864-77446883 | MS.gene50279:intron | 50.0% |
| AGAGCAGTGGAAGGAACCCT+AGG | + | chr4.4:77447377-77447396 | MS.gene50279:CDS | 55.0% | |
| AGTGGAAGGAGCTTAACGGC+AGG | - | chr4.4:77449385-77449404 | None:intergenic | 55.0% | |
| CAACGGGGTATGTGGCATCA+TGG | + | chr4.4:77445584-77445603 | MS.gene50279:CDS | 55.0% | |
| CGGCAGTGGAAGGAGCTTAA+CGG | - | chr4.4:77449389-77449408 | None:intergenic | 55.0% | |
| GTGGAAGGAGCTTAACGGCA+GGG | - | chr4.4:77449384-77449403 | None:intergenic | 55.0% | |
| ! | ACTCACTTGGGTTGTCCTGG+TGG | + | chr4.4:77446846-77446865 | MS.gene50279:intron | 55.0% |
| ! | GCTTGTGATCTGGGAGTGTG+CGG | + | chr4.4:77446874-77446893 | MS.gene50279:intron | 55.0% |
| !! | ATCCATTTGGGTTGCGCGTG+CGG | + | chr4.4:77447833-77447852 | MS.gene50279:intron | 55.0% |
| GACAGGAGCAACGGGGTATG+TGG | + | chr4.4:77445576-77445595 | MS.gene50279:CDS | 60.0% | |
| TTCCGCACGCGCAACCCAAA+TGG | - | chr4.4:77447838-77447857 | None:intergenic | 60.0% | |
| ! | TGTGATCTGGGAGTGTGCGG+CGG | + | chr4.4:77446877-77446896 | MS.gene50279:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 77445547 | 77451188 | 77445547 | ID=MS.gene50279 |
| chr4.4 | mRNA | 77445547 | 77451188 | 77445547 | ID=MS.gene50279.t1;Parent=MS.gene50279 |
| chr4.4 | exon | 77445547 | 77445673 | 77445547 | ID=MS.gene50279.t1.exon1;Parent=MS.gene50279.t1 |
| chr4.4 | CDS | 77445547 | 77445673 | 77445547 | ID=cds.MS.gene50279.t1;Parent=MS.gene50279.t1 |
| chr4.4 | exon | 77447195 | 77447716 | 77447195 | ID=MS.gene50279.t1.exon2;Parent=MS.gene50279.t1 |
| chr4.4 | CDS | 77447195 | 77447716 | 77447195 | ID=cds.MS.gene50279.t1;Parent=MS.gene50279.t1 |
| chr4.4 | exon | 77448085 | 77448280 | 77448085 | ID=MS.gene50279.t1.exon3;Parent=MS.gene50279.t1 |
| chr4.4 | CDS | 77448085 | 77448280 | 77448085 | ID=cds.MS.gene50279.t1;Parent=MS.gene50279.t1 |
| chr4.4 | exon | 77451044 | 77451188 | 77451044 | ID=MS.gene50279.t1.exon4;Parent=MS.gene50279.t1 |
| chr4.4 | CDS | 77451044 | 77451188 | 77451044 | ID=cds.MS.gene50279.t1;Parent=MS.gene50279.t1 |
| Gene Sequence |
| Protein sequence |
