AlfalfaGEDB | MS.gene43874

M. sativa cultivar XinJiangDaYe / MS.gene43874

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43874.t1	GAU15690.1	80.3	188	36	1	8	194	40	227	1.90E-84	322

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43874.t1	P84527	73.2	179	47	1	8	186	36	213	9.0e-75	281.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43874.t1	G8A171	81.9	182	30	1	8	186	39	220	6.8e-84	319.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04932	MS.gene43874	0.820863	5.48E-53	-1.69E-46
MS.gene049488	MS.gene43874	-0.801774	7.68E-49	-1.69E-46
MS.gene049549	MS.gene43874	0.868039	8.78E-66	-1.69E-46
MS.gene050095	MS.gene43874	0.823932	1.06E-53	-1.69E-46
MS.gene050096	MS.gene43874	0.853032	3.12E-61	-1.69E-46
MS.gene050133	MS.gene43874	0.800847	1.19E-48	-1.69E-46
MS.gene050593	MS.gene43874	-0.813151	2.96E-51	-1.69E-46
MS.gene050670	MS.gene43874	-0.802675	5.01E-49	-1.69E-46
MS.gene050720	MS.gene43874	0.808003	3.83E-50	-1.69E-46
MS.gene05104	MS.gene43874	0.80159	8.38E-49	-1.69E-46
MS.gene051131	MS.gene43874	0.827672	1.37E-54	-1.69E-46
MS.gene051158	MS.gene43874	0.803029	4.24E-49	-1.69E-46
MS.gene051385	MS.gene43874	0.832636	8.44E-56	-1.69E-46
MS.gene051525	MS.gene43874	-0.800061	1.72E-48	-1.69E-46
MS.gene051632	MS.gene43874	0.809427	1.90E-50	-1.69E-46
MS.gene051996	MS.gene43874	0.834671	2.62E-56	-1.69E-46
MS.gene052011	MS.gene43874	0.810873	9.28E-51	-1.69E-46
MS.gene052134	MS.gene43874	-0.806086	9.76E-50	-1.69E-46
MS.gene052211	MS.gene43874	0.841247	5.33E-58	-1.69E-46
MS.gene052223	MS.gene43874	0.815267	1.01E-51	-1.69E-46
MS.gene05233	MS.gene43874	0.81537	9.57E-52	-1.69E-46
MS.gene05234	MS.gene43874	0.805674	1.19E-49	-1.69E-46
MS.gene05240	MS.gene43874	0.843719	1.18E-58	-1.69E-46
MS.gene05244	MS.gene43874	0.826951	2.05E-54	-1.69E-46
MS.gene052606	MS.gene43874	0.80301	4.27E-49	-1.69E-46
MS.gene052702	MS.gene43874	0.803942	2.74E-49	-1.69E-46
MS.gene052706	MS.gene43874	0.813148	2.96E-51	-1.69E-46
MS.gene052805	MS.gene43874	0.80649	8.02E-50	-1.69E-46
MS.gene053030	MS.gene43874	0.8039	2.79E-49	-1.69E-46
MS.gene053031	MS.gene43874	0.800597	1.34E-48	-1.69E-46
MS.gene053403	MS.gene43874	0.824426	8.12E-54	-1.69E-46
MS.gene053406	MS.gene43874	0.863791	1.93E-64	-1.69E-46
MS.gene054107	MS.gene43874	-0.808585	2.88E-50	-1.69E-46
MS.gene054138	MS.gene43874	0.80871	2.71E-50	-1.69E-46
MS.gene054146	MS.gene43874	0.859395	4.26E-63	-1.69E-46
MS.gene054147	MS.gene43874	0.843095	1.73E-58	-1.69E-46
MS.gene054181	MS.gene43874	0.829338	5.44E-55	-1.69E-46
MS.gene054277	MS.gene43874	0.817376	3.41E-52	-1.69E-46
MS.gene054290	MS.gene43874	0.8235	1.34E-53	-1.69E-46
MS.gene054421	MS.gene43874	0.818047	2.40E-52	-1.69E-46
MS.gene054742	MS.gene43874	0.87418	8.26E-68	-1.69E-46
MS.gene054884	MS.gene43874	0.801565	8.48E-49	-1.69E-46
MS.gene055124	MS.gene43874	0.816908	4.34E-52	-1.69E-46
MS.gene055154	MS.gene43874	0.800455	1.43E-48	-1.69E-46
MS.gene055240	MS.gene43874	0.837197	5.99E-57	-1.69E-46
MS.gene055601	MS.gene43874	0.844405	7.72E-59	-1.69E-46
MS.gene056218	MS.gene43874	0.81654	5.25E-52	-1.69E-46
MS.gene056330	MS.gene43874	0.847654	1.01E-59	-1.69E-46
MS.gene056514	MS.gene43874	-0.806508	7.95E-50	-1.69E-46
MS.gene056590	MS.gene43874	0.841965	3.45E-58	-1.69E-46
MS.gene056591	MS.gene43874	0.841199	5.49E-58	-1.69E-46
MS.gene056690	MS.gene43874	0.810397	1.18E-50	-1.69E-46
MS.gene056748	MS.gene43874	0.815251	1.02E-51	-1.69E-46
MS.gene056899	MS.gene43874	0.839887	1.21E-57	-1.69E-46
MS.gene056920	MS.gene43874	0.847435	1.16E-59	-1.69E-46
MS.gene056922	MS.gene43874	0.830691	2.55E-55	-1.69E-46
MS.gene056923	MS.gene43874	0.81536	9.62E-52	-1.69E-46
MS.gene056924	MS.gene43874	0.814063	1.86E-51	-1.69E-46
MS.gene057261	MS.gene43874	0.802786	4.76E-49	-1.69E-46
MS.gene057544	MS.gene43874	0.834396	3.07E-56	-1.69E-46
MS.gene057547	MS.gene43874	0.801883	7.30E-49	-1.69E-46
MS.gene057550	MS.gene43874	0.806922	6.50E-50	-1.69E-46
MS.gene058177	MS.gene43874	0.829234	5.77E-55	-1.69E-46
MS.gene058218	MS.gene43874	0.851721	7.38E-61	-1.69E-46
MS.gene058603	MS.gene43874	0.838725	2.42E-57	-1.69E-46
MS.gene058928	MS.gene43874	-0.801543	8.57E-49	-1.69E-46
MS.gene059037	MS.gene43874	0.818327	2.08E-52	-1.69E-46
MS.gene059043	MS.gene43874	0.818492	1.91E-52	-1.69E-46
MS.gene059294	MS.gene43874	-0.800116	1.68E-48	-1.69E-46
MS.gene059328	MS.gene43874	0.812265	4.62E-51	-1.69E-46
MS.gene059402	MS.gene43874	0.820396	7.01E-53	-1.69E-46
MS.gene059420	MS.gene43874	-0.801367	9.31E-49	-1.69E-46
MS.gene059892	MS.gene43874	0.805808	1.12E-49	-1.69E-46
MS.gene059953	MS.gene43874	0.831794	1.36E-55	-1.69E-46
MS.gene059955	MS.gene43874	0.857527	1.54E-62	-1.69E-46
MS.gene060087	MS.gene43874	0.870097	1.89E-66	-1.69E-46
MS.gene060593	MS.gene43874	0.80142	9.08E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43874.t1	MTR_2g095130	84.066	182	26	1	8	186	39	220	4.50e-105	301
MS.gene43874.t1	MTR_2g095060	76.243	181	41	1	8	186	39	219	1.84e-92	269
MS.gene43874.t1	MTR_2g095080	76.630	184	38	2	8	186	39	222	7.55e-92	268
MS.gene43874.t1	MTR_2g095170	93.966	116	7	0	5	120	36	151	1.57e-74	222
MS.gene43874.t1	MTR_4g036290	57.639	144	57	3	44	184	44	186	8.16e-51	162
MS.gene43874.t1	MTR_7g077050	58.108	148	57	4	40	184	39	184	1.11e-50	162
MS.gene43874.t1	MTR_7g077110	58.108	148	57	4	40	184	41	186	1.33e-50	162
MS.gene43874.t1	MTR_7g077000	60.156	128	49	2	58	184	2	128	6.26e-49	155
MS.gene43874.t1	MTR_8g031170	60.305	131	50	2	55	184	61	190	1.31e-48	157
MS.gene43874.t1	MTR_7g076990	56.757	148	59	4	40	184	41	186	2.72e-48	156
MS.gene43874.t1	MTR_4g036300	56.757	148	59	4	40	184	41	186	2.72e-48	156
MS.gene43874.t1	MTR_7g012350	56.081	148	60	4	40	184	41	186	7.39e-48	155
MS.gene43874.t1	MTR_7g076770	60.938	128	48	2	58	184	61	187	8.58e-48	155
MS.gene43874.t1	MTR_7g076920	56.081	148	60	4	40	184	41	186	9.09e-48	154
MS.gene43874.t1	MTR_7g077010	57.576	132	54	2	54	184	57	187	4.58e-47	153
MS.gene43874.t1	MTR_7g077090	53.247	154	64	4	34	184	39	187	5.10e-47	153
MS.gene43874.t1	MTR_7g012340	54.730	148	62	4	40	184	41	186	7.40e-47	152
MS.gene43874.t1	MTR_7g076960	55.102	147	62	4	40	184	39	183	1.61e-46	151
MS.gene43874.t1	MTR_4g036410	57.252	131	54	2	55	184	39	168	7.36e-46	149
MS.gene43874.t1	MTR_7g076970	57.252	131	54	2	55	184	58	187	1.09e-45	149
MS.gene43874.t1	MTR_8g031120	51.754	114	43	3	72	184	34	136	1.29e-30	109
MS.gene43874.t1	MTR_8g031150	51.754	114	43	3	72	184	42	144	1.05e-29	107
MS.gene43874.t1	MTR_8g031160	49.107	112	42	2	72	183	24	120	5.57e-27	99.8
MS.gene43874.t1	MTR_7g077040	43.966	116	38	2	55	170	36	124	5.47e-23	89.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 67 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTAGCTGTGTGGAATGCTTT+AGG	0.246178	2.2:+6485907	MS.gene43874:CDS
TAGCTGTGTGGAATGCTTTA+GGG	0.269715	2.2:+6485908	MS.gene43874:CDS
TGTCGTAACAATATTGTTGA+TGG	0.347026	2.2:+6485880	MS.gene43874:CDS
TGATTCTCCGTCGCACTCTA+AGG	0.363482	2.2:-6485566	None:intergenic
CGTTGTACCATCCGGTGGAC+AGG	0.400359	2.2:-6485732	None:intergenic
CATATGTTGGTCCCAACGTC+GGG	0.409197	2.2:-6485490	None:intergenic
CCAGTTACATGGTCTATGTC+TGG	0.410397	2.2:+6485955	MS.gene43874:CDS
GGCGACAAGTGTAAATCTTC+CGG	0.412697	2.2:+6485541	MS.gene43874:CDS
TTAGAATCACCGCGAGGAAC+GGG	0.413213	2.2:+6485779	MS.gene43874:CDS
TTGTCGCCACTTGGTGGTGG+AGG	0.433015	2.2:-6485526	None:intergenic
CCACTTGGTGGTGGAGGGGA+CGG	0.436308	2.2:-6485520	None:intergenic
CCAGACATAGACCATGTAAC+TGG	0.445756	2.2:-6485955	None:intergenic
GCAACGATGACCCCGACGTT+GGG	0.448979	2.2:+6485479	MS.gene43874:CDS
TGGTGGTGGAGGGGACGGTT+TGG	0.450078	2.2:-6485515	None:intergenic
CTACTCTTTCTGAGTTGCTA+TGG	0.454282	2.2:-6485705	None:intergenic
GTGGAGAGCACTTGAATTGA+GGG	0.454649	2.2:-6485591	None:intergenic
AGAGTAGTGGCCCTGTCCAC+CGG	0.488313	2.2:+6485721	MS.gene43874:CDS
CACTTGTCGCCACTTGGTGG+TGG	0.492715	2.2:-6485529	None:intergenic
GATTTCAGCGAGGGTGGCGA+TGG	0.507805	2.2:+6485652	MS.gene43874:CDS
GGTGGAGAGCACTTGAATTG+AGG	0.508261	2.2:-6485592	None:intergenic
TGTCGCCACTTGGTGGTGGA+GGG	0.508955	2.2:-6485525	None:intergenic
ATTAGAATCACCGCGAGGAA+CGG	0.523253	2.2:+6485778	MS.gene43874:CDS
GGACGGTTTGGTGCATATGT+TGG	0.523330	2.2:-6485503	None:intergenic
GTCGCCACTTGGTGGTGGAG+GGG	0.524109	2.2:-6485524	None:intergenic
GACCAGTGTGATTCAGTGAA+TGG	0.526043	2.2:+6485826	MS.gene43874:CDS
GATTTACACTTGTCGCCACT+TGG	0.526065	2.2:-6485535	None:intergenic
TTCAGCGAGGGTGGCGATGG+AGG	0.531365	2.2:+6485655	MS.gene43874:CDS
AATTGCTCGTCGCACTGAGA+TGG	0.531537	2.2:-6485682	None:intergenic
TTACACTTGTCGCCACTTGG+TGG	0.536650	2.2:-6485532	None:intergenic
TGAACCTCCGTTGTACCATC+CGG	0.538055	2.2:-6485740	None:intergenic
GGTCAACTCATTTGCATCAA+CGG	0.540764	2.2:+6485451	MS.gene43874:CDS
TTAGGGTTGGATACTGATGA+TGG	0.540804	2.2:+6485925	MS.gene43874:CDS
TCCGTCGCACTCTAAGGTGC+CGG	0.545674	2.2:-6485560	None:intergenic
GCTTGTGTGGAAGATGAAAC+TGG	0.550048	2.2:-6485613	None:intergenic
GAGGAGTGTGATGGCGAAAG+TGG	0.551844	2.2:+6485801	MS.gene43874:CDS
GCATATGTTGGTCCCAACGT+CGG	0.558869	2.2:-6485491	None:intergenic
GTTGTACCATCCGGTGGACA+GGG	0.562020	2.2:-6485731	None:intergenic
TGCAACGATGACCCCGACGT+TGG	0.562513	2.2:+6485478	MS.gene43874:CDS
TTGAATGATTTCAGCGAGGG+TGG	0.573268	2.2:+6485646	MS.gene43874:CDS
ATGGTGTGGTGCCAGTTACA+TGG	0.574649	2.2:+6485944	MS.gene43874:CDS
GAGGAACGGGAGGAGTGTGA+TGG	0.583244	2.2:+6485792	MS.gene43874:CDS
GAATCACCGCGAGGAACGGG+AGG	0.586047	2.2:+6485782	MS.gene43874:CDS
AAACTCTCAAACGACTGCGC+TGG	0.587411	2.2:+6485430	MS.gene43874:CDS
ACGTTGAATGATTTCAGCGA+GGG	0.598557	2.2:+6485643	MS.gene43874:CDS
CTGTCCACCGGATGGTACAA+CGG	0.625342	2.2:+6485733	MS.gene43874:CDS
GAGTGTGATGGCGAAAGTGG+TGG	0.626341	2.2:+6485804	MS.gene43874:CDS
GTTGGATACTGATGATGGTG+TGG	0.638034	2.2:+6485930	MS.gene43874:CDS
TACAACGGAGGTTCAAGATG+TGG	0.638491	2.2:+6485748	MS.gene43874:CDS
CACACTCCTCCCGTTCCTCG+CGG	0.641101	2.2:-6485788	None:intergenic
TAGTGGCCCTGTCCACCGGA+TGG	0.641578	2.2:+6485725	MS.gene43874:CDS
GGATGTGATGAGGAACATGC+AGG	0.645551	2.2:+6485847	MS.gene43874:CDS
TGTGTGGAATGCTTTAGGGT+TGG	0.646152	2.2:+6485912	MS.gene43874:CDS
CCGTCCCCTCCACCACCAAG+TGG	0.646637	2.2:+6485520	MS.gene43874:CDS
ATCCATTCACTGAATCACAC+TGG	0.661311	2.2:-6485828	None:intergenic
CAACGTGAGTAATGCTTGTG+TGG	0.662007	2.2:-6485626	None:intergenic
ACCTCCGTTGTACCATCCGG+TGG	0.666402	2.2:-6485737	None:intergenic
TCCGGCACCTTAGAGTGCGA+CGG	0.673293	2.2:+6485559	MS.gene43874:CDS
TAGCAACTCAGAAAGAGTAG+TGG	0.673721	2.2:+6485708	MS.gene43874:CDS
CACGTTGAATGATTTCAGCG+AGG	0.674472	2.2:+6485642	MS.gene43874:CDS
TTCAGTGAATGGATGTGATG+AGG	0.675998	2.2:+6485837	MS.gene43874:CDS
ATATGTTGGTCCCAACGTCG+GGG	0.692316	2.2:-6485489	None:intergenic
ACAATATTGTTACGACAAGG+TGG	0.698524	2.2:-6485874	None:intergenic
TCAACAATATTGTTACGACA+AGG	0.725534	2.2:-6485877	None:intergenic
TTGATGGATCTGTAGCTGTG+TGG	0.729799	2.2:+6485896	MS.gene43874:CDS
TCCACCGGATGGTACAACGG+AGG	0.763995	2.2:+6485736	MS.gene43874:CDS
TGTGTGGAAGATGAAACTGG+TGG	0.770461	2.2:-6485610	None:intergenic
AAATGATTAGAATCACCGCG+AGG	0.806861	2.2:+6485773	MS.gene43874:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TCAACAATATTGTTACGACA+AGG	-	chr2.2:6485880-6485899	None:intergenic	30.0%
	TGTCGTAACAATATTGTTGA+TGG	+	chr2.2:6485880-6485899	MS.gene43874:CDS	30.0%
	ACAATATTGTTACGACAAGG+TGG	-	chr2.2:6485877-6485896	None:intergenic	35.0%
!	AGTCGTTTGAGAGTTTTACA+AGG	-	chr2.2:6485426-6485445	None:intergenic	35.0%
	AAATGATTAGAATCACCGCG+AGG	+	chr2.2:6485773-6485792	MS.gene43874:CDS	40.0%
	ACGTTGAATGATTTCAGCGA+GGG	+	chr2.2:6485643-6485662	MS.gene43874:CDS	40.0%
	ATCCATTCACTGAATCACAC+TGG	-	chr2.2:6485831-6485850	None:intergenic	40.0%
	CTACTCTTTCTGAGTTGCTA+TGG	-	chr2.2:6485708-6485727	None:intergenic	40.0%
	GGTCAACTCATTTGCATCAA+CGG	+	chr2.2:6485451-6485470	MS.gene43874:CDS	40.0%
	TAGCAACTCAGAAAGAGTAG+TGG	+	chr2.2:6485708-6485727	MS.gene43874:CDS	40.0%
	TAGCTGTGTGGAATGCTTTA+GGG	+	chr2.2:6485908-6485927	MS.gene43874:CDS	40.0%
	TTAGGGTTGGATACTGATGA+TGG	+	chr2.2:6485925-6485944	MS.gene43874:CDS	40.0%
	TTCAGTGAATGGATGTGATG+AGG	+	chr2.2:6485837-6485856	MS.gene43874:CDS	40.0%
	ATTAGAATCACCGCGAGGAA+CGG	+	chr2.2:6485778-6485797	MS.gene43874:CDS	45.0%
	CAACGTGAGTAATGCTTGTG+TGG	-	chr2.2:6485629-6485648	None:intergenic	45.0%
	CACGTTGAATGATTTCAGCG+AGG	+	chr2.2:6485642-6485661	MS.gene43874:CDS	45.0%
	CCAGACATAGACCATGTAAC+TGG	-	chr2.2:6485958-6485977	None:intergenic	45.0%
	CCAGTTACATGGTCTATGTC+TGG	+	chr2.2:6485955-6485974	MS.gene43874:CDS	45.0%
	GACCAGTGTGATTCAGTGAA+TGG	+	chr2.2:6485826-6485845	MS.gene43874:CDS	45.0%
	GATTTACACTTGTCGCCACT+TGG	-	chr2.2:6485538-6485557	None:intergenic	45.0%
	GCTTGTGTGGAAGATGAAAC+TGG	-	chr2.2:6485616-6485635	None:intergenic	45.0%
	GGCGACAAGTGTAAATCTTC+CGG	+	chr2.2:6485541-6485560	MS.gene43874:CDS	45.0%
	GTAGCTGTGTGGAATGCTTT+AGG	+	chr2.2:6485907-6485926	MS.gene43874:CDS	45.0%
	TACAACGGAGGTTCAAGATG+TGG	+	chr2.2:6485748-6485767	MS.gene43874:CDS	45.0%
	TGTGTGGAAGATGAAACTGG+TGG	-	chr2.2:6485613-6485632	None:intergenic	45.0%
	TTGAATGATTTCAGCGAGGG+TGG	+	chr2.2:6485646-6485665	MS.gene43874:CDS	45.0%
!	TTGATGGATCTGTAGCTGTG+TGG	+	chr2.2:6485896-6485915	MS.gene43874:CDS	45.0%
!!	GTGGAGAGCACTTGAATTGA+GGG	-	chr2.2:6485594-6485613	None:intergenic	45.0%
!!	GTTGGATACTGATGATGGTG+TGG	+	chr2.2:6485930-6485949	MS.gene43874:CDS	45.0%
!!	TGTGTGGAATGCTTTAGGGT+TGG	+	chr2.2:6485912-6485931	MS.gene43874:CDS	45.0%
	AAACTCTCAAACGACTGCGC+TGG	+	chr2.2:6485430-6485449	MS.gene43874:CDS	50.0%
	AATTGCTCGTCGCACTGAGA+TGG	-	chr2.2:6485685-6485704	None:intergenic	50.0%
	ATATGTTGGTCCCAACGTCG+GGG	-	chr2.2:6485492-6485511	None:intergenic	50.0%
	CATATGTTGGTCCCAACGTC+GGG	-	chr2.2:6485493-6485512	None:intergenic	50.0%
	GCATATGTTGGTCCCAACGT+CGG	-	chr2.2:6485494-6485513	None:intergenic	50.0%
	GGATGTGATGAGGAACATGC+AGG	+	chr2.2:6485847-6485866	MS.gene43874:CDS	50.0%
	TGAACCTCCGTTGTACCATC+CGG	-	chr2.2:6485743-6485762	None:intergenic	50.0%
	TGATTCTCCGTCGCACTCTA+AGG	-	chr2.2:6485569-6485588	None:intergenic	50.0%
	TTACACTTGTCGCCACTTGG+TGG	-	chr2.2:6485535-6485554	None:intergenic	50.0%
	TTAGAATCACCGCGAGGAAC+GGG	+	chr2.2:6485779-6485798	MS.gene43874:CDS	50.0%
!	ATGGTGTGGTGCCAGTTACA+TGG	+	chr2.2:6485944-6485963	MS.gene43874:CDS	50.0%
!!	GGACGGTTTGGTGCATATGT+TGG	-	chr2.2:6485506-6485525	None:intergenic	50.0%
!!	GGTGGAGAGCACTTGAATTG+AGG	-	chr2.2:6485595-6485614	None:intergenic	50.0%
	CTGTCCACCGGATGGTACAA+CGG	+	chr2.2:6485733-6485752	MS.gene43874:CDS	55.0%
	GTTGTACCATCCGGTGGACA+GGG	-	chr2.2:6485734-6485753	None:intergenic	55.0%
!	GAGGAGTGTGATGGCGAAAG+TGG	+	chr2.2:6485801-6485820	MS.gene43874:CDS	55.0%
!	GAGTGTGATGGCGAAAGTGG+TGG	+	chr2.2:6485804-6485823	MS.gene43874:CDS	55.0%
	ACCTCCGTTGTACCATCCGG+TGG	-	chr2.2:6485740-6485759	None:intergenic	60.0%
	AGAGTAGTGGCCCTGTCCAC+CGG	+	chr2.2:6485721-6485740	MS.gene43874:CDS	60.0%
	CGTTGTACCATCCGGTGGAC+AGG	-	chr2.2:6485735-6485754	None:intergenic	60.0%
	GATTTCAGCGAGGGTGGCGA+TGG	+	chr2.2:6485652-6485671	MS.gene43874:CDS	60.0%
	GCAACGATGACCCCGACGTT+GGG	+	chr2.2:6485479-6485498	MS.gene43874:CDS	60.0%
	TCCACCGGATGGTACAACGG+AGG	+	chr2.2:6485736-6485755	MS.gene43874:CDS	60.0%
	TCCGGCACCTTAGAGTGCGA+CGG	+	chr2.2:6485559-6485578	MS.gene43874:CDS	60.0%
	TGCAACGATGACCCCGACGT+TGG	+	chr2.2:6485478-6485497	MS.gene43874:CDS	60.0%
!	CACTTGTCGCCACTTGGTGG+TGG	-	chr2.2:6485532-6485551	None:intergenic	60.0%
!	GAGGAACGGGAGGAGTGTGA+TGG	+	chr2.2:6485792-6485811	MS.gene43874:CDS	60.0%
!!	TCCGTCGCACTCTAAGGTGC+CGG	-	chr2.2:6485563-6485582	None:intergenic	60.0%
!!	TGTCGCCACTTGGTGGTGGA+GGG	-	chr2.2:6485528-6485547	None:intergenic	60.0%
!!	TTGTCGCCACTTGGTGGTGG+AGG	-	chr2.2:6485529-6485548	None:intergenic	60.0%
	CACACTCCTCCCGTTCCTCG+CGG	-	chr2.2:6485791-6485810	None:intergenic	65.0%
	GAATCACCGCGAGGAACGGG+AGG	+	chr2.2:6485782-6485801	MS.gene43874:CDS	65.0%
	TAGTGGCCCTGTCCACCGGA+TGG	+	chr2.2:6485725-6485744	MS.gene43874:CDS	65.0%
	TTCAGCGAGGGTGGCGATGG+AGG	+	chr2.2:6485655-6485674	MS.gene43874:CDS	65.0%
!!	CCACTTGGTGGTGGAGGGGA+CGG	-	chr2.2:6485523-6485542	None:intergenic	65.0%
!!	GTCGCCACTTGGTGGTGGAG+GGG	-	chr2.2:6485527-6485546	None:intergenic	65.0%
!!	TGGTGGTGGAGGGGACGGTT+TGG	-	chr2.2:6485518-6485537	None:intergenic	65.0%
	CCGTCCCCTCCACCACCAAG+TGG	+	chr2.2:6485520-6485539	MS.gene43874:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.2	gene	6485418	6486011	6485418	ID=MS.gene43874
chr2.2	mRNA	6485418	6486011	6485418	ID=MS.gene43874.t1;Parent=MS.gene43874
chr2.2	exon	6485418	6486011	6485418	ID=MS.gene43874.t1.exon1;Parent=MS.gene43874.t1
chr2.2	CDS	6485418	6486011	6485418	ID=cds.MS.gene43874.t1;Parent=MS.gene43874.t1

Gene Sequence

>MS.gene43874

ATGGACCTTGTAAAACTCTCAAACGACTGCGCTGGTCAACTCATTTGCATCAACGGAAAATGCAACGATGACCCCGACGTTGGGACCAACATATGCACCAAACCGTCCCCTCCACCACCAAGTGGCGACAAGTGTAAATCTTCCGGCACCTTAGAGTGCGACGGAGAATCATTCCCTCAATTCAAGTGCTCTCCACCAGTTTCATCTTCCACACAAGCATTACTCACGTTGAATGATTTCAGCGAGGGTGGCGATGGAGGAGCTCCATCTCAGTGCGACGAGCAATTCCATAGCAACTCAGAAAGAGTAGTGGCCCTGTCCACCGGATGGTACAACGGAGGTTCAAGATGTGGAAAAATGATTAGAATCACCGCGAGGAACGGGAGGAGTGTGATGGCGAAAGTGGTGGACCAGTGTGATTCAGTGAATGGATGTGATGAGGAACATGCAGGTCAGCCACCTTGTCGTAACAATATTGTTGATGGATCTGTAGCTGTGTGGAATGCTTTAGGGTTGGATACTGATGATGGTGTGGTGCCAGTTACATGGTCTATGTCTGGATCTAATGAAGCTTATGAAACATTTAATGCCTAA

Protein sequence

>MS.gene43874.t1

MDLVKLSNDCAGQLICINGKCNDDPDVGTNICTKPSPPPPSGDKCKSSGTLECDGESFPQFKCSPPVSSSTQALLTLNDFSEGGDGGAPSQCDEQFHSNSERVVALSTGWYNGGSRCGKMIRITARNGRSVMAKVVDQCDSVNGCDEEHAGQPPCRNNIVDGSVAVWNALGLDTDDGVVPVTWSMSGSNEAYETFNA