AlfalfaGEDB | MS.gene54029

M. sativa cultivar XinJiangDaYe / MS.gene54029

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54029.t1	XP_013465332.1	82.7	220	35	1	1	217	1	220	4.70E-103	384

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54029.t1	P84527	69.0	210	63	2	8	217	6	213	7.5e-81	301.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54029.t1	G8A171	82.7	220	35	1	1	217	1	220	3.4e-103	384.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04932	MS.gene54029	0.828776	7.45E-55	-1.69E-46
MS.gene049549	MS.gene54029	0.871244	7.92E-67	-1.69E-46
MS.gene049634	MS.gene54029	0.815323	9.81E-52	-1.69E-46
MS.gene050095	MS.gene54029	0.829867	4.05E-55	-1.69E-46
MS.gene050096	MS.gene54029	0.852762	3.73E-61	-1.69E-46
MS.gene050647	MS.gene54029	0.816112	6.54E-52	-1.69E-46
MS.gene050720	MS.gene54029	0.830839	2.34E-55	-1.69E-46
MS.gene051127	MS.gene54029	0.800426	1.45E-48	-1.69E-46
MS.gene051131	MS.gene54029	0.841857	3.68E-58	-1.69E-46
MS.gene051138	MS.gene54029	0.803043	4.21E-49	-1.69E-46
MS.gene051385	MS.gene54029	0.809705	1.66E-50	-1.69E-46
MS.gene051632	MS.gene54029	0.827202	1.78E-54	-1.69E-46
MS.gene051844	MS.gene54029	0.816903	4.35E-52	-1.69E-46
MS.gene051996	MS.gene54029	0.809695	1.67E-50	-1.69E-46
MS.gene052211	MS.gene54029	0.861434	1.03E-63	-1.69E-46
MS.gene052212	MS.gene54029	0.803493	3.40E-49	-1.69E-46
MS.gene05240	MS.gene54029	0.838336	3.06E-57	-1.69E-46
MS.gene05244	MS.gene54029	0.849004	4.27E-60	-1.69E-46
MS.gene052606	MS.gene54029	0.83651	8.97E-57	-1.69E-46
MS.gene052702	MS.gene54029	0.803255	3.80E-49	-1.69E-46
MS.gene052706	MS.gene54029	0.810196	1.30E-50	-1.69E-46
MS.gene053030	MS.gene54029	0.825155	5.47E-54	-1.69E-46
MS.gene053031	MS.gene54029	0.829899	3.98E-55	-1.69E-46
MS.gene053033	MS.gene54029	0.813211	2.87E-51	-1.69E-46
MS.gene053403	MS.gene54029	0.847718	9.69E-60	-1.69E-46
MS.gene053406	MS.gene54029	0.889155	3.12E-73	-1.69E-46
MS.gene053420	MS.gene54029	0.814919	1.21E-51	-1.69E-46
MS.gene053488	MS.gene54029	0.810778	9.73E-51	-1.69E-46
MS.gene053887	MS.gene54029	0.809294	2.03E-50	-1.69E-46
MS.gene054146	MS.gene54029	0.853893	1.77E-61	-1.69E-46
MS.gene054147	MS.gene54029	0.824025	1.01E-53	-1.69E-46
MS.gene054181	MS.gene54029	0.833552	4.99E-56	-1.69E-46
MS.gene054277	MS.gene54029	0.818644	1.76E-52	-1.69E-46
MS.gene054290	MS.gene54029	0.804255	2.36E-49	-1.69E-46
MS.gene054421	MS.gene54029	0.811185	7.95E-51	-1.69E-46
MS.gene054742	MS.gene54029	0.857376	1.70E-62	-1.69E-46
MS.gene05483	MS.gene54029	0.824627	7.29E-54	-1.69E-46
MS.gene055124	MS.gene54029	0.833034	6.72E-56	-1.69E-46
MS.gene055154	MS.gene54029	0.814984	1.17E-51	-1.69E-46
MS.gene055240	MS.gene54029	0.874479	6.54E-68	-1.69E-46
MS.gene055601	MS.gene54029	0.807118	5.91E-50	-1.69E-46
MS.gene056076	MS.gene54029	0.80929	2.04E-50	-1.69E-46
MS.gene056218	MS.gene54029	0.839586	1.45E-57	-1.69E-46
MS.gene056224	MS.gene54029	0.820521	6.56E-53	-1.69E-46
MS.gene056330	MS.gene54029	0.813259	2.80E-51	-1.69E-46
MS.gene056590	MS.gene54029	0.865375	6.18E-65	-1.69E-46
MS.gene056591	MS.gene54029	0.863609	2.20E-64	-1.69E-46
MS.gene056680	MS.gene54029	0.80558	1.25E-49	-1.69E-46
MS.gene056715	MS.gene54029	0.815224	1.03E-51	-1.69E-46
MS.gene056748	MS.gene54029	0.841475	4.65E-58	-1.69E-46
MS.gene056856	MS.gene54029	0.809757	1.62E-50	-1.69E-46
MS.gene056920	MS.gene54029	0.849703	2.73E-60	-1.69E-46
MS.gene056922	MS.gene54029	0.816972	4.20E-52	-1.69E-46
MS.gene057261	MS.gene54029	0.827037	1.95E-54	-1.69E-46
MS.gene057544	MS.gene54029	0.848117	7.52E-60	-1.69E-46
MS.gene057547	MS.gene54029	0.818357	2.04E-52	-1.69E-46
MS.gene057550	MS.gene54029	0.819365	1.21E-52	-1.69E-46
MS.gene057768	MS.gene54029	0.806326	8.69E-50	-1.69E-46
MS.gene057770	MS.gene54029	0.80535	1.39E-49	-1.69E-46
MS.gene058093	MS.gene54029	0.814541	1.46E-51	-1.69E-46
MS.gene058109	MS.gene54029	0.817689	2.89E-52	-1.69E-46
MS.gene058117	MS.gene54029	0.814387	1.58E-51	-1.69E-46
MS.gene058171	MS.gene54029	0.800348	1.50E-48	-1.69E-46
MS.gene058175	MS.gene54029	0.801578	8.43E-49	-1.69E-46
MS.gene058177	MS.gene54029	0.848604	5.51E-60	-1.69E-46
MS.gene058218	MS.gene54029	0.819273	1.27E-52	-1.69E-46
MS.gene058603	MS.gene54029	0.84575	3.34E-59	-1.69E-46
MS.gene059037	MS.gene54029	0.815555	8.71E-52	-1.69E-46
MS.gene059328	MS.gene54029	0.815925	7.20E-52	-1.69E-46
MS.gene059402	MS.gene54029	0.813621	2.33E-51	-1.69E-46
MS.gene059892	MS.gene54029	0.819327	1.23E-52	-1.69E-46
MS.gene059953	MS.gene54029	0.840419	8.80E-58	-1.69E-46
MS.gene059955	MS.gene54029	0.866032	3.83E-65	-1.69E-46
MS.gene060087	MS.gene54029	0.845007	5.31E-59	-1.69E-46
MS.gene060593	MS.gene54029	0.822524	2.26E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene54029.t1	MTR_2g095130	84.545	220	31	1	1	217	1	220	1.43e-131	369
MS.gene54029.t1	MTR_2g095080	77.928	222	44	2	1	217	1	222	2.82e-117	333
MS.gene54029.t1	MTR_2g095060	76.712	219	49	1	1	217	1	219	3.59e-115	328
MS.gene54029.t1	MTR_2g095170	96.026	151	6	0	1	151	1	151	1.70e-102	294
MS.gene54029.t1	MTR_4g036290	57.639	144	57	3	75	215	44	186	1.58e-50	163
MS.gene54029.t1	MTR_7g077110	58.108	148	57	4	71	215	41	186	1.91e-50	162
MS.gene54029.t1	MTR_7g077050	58.108	148	57	4	71	215	39	184	2.04e-50	162
MS.gene54029.t1	MTR_7g077000	60.156	128	49	2	89	215	2	128	1.60e-48	155
MS.gene54029.t1	MTR_8g031170	60.305	131	50	2	86	215	61	190	3.31e-48	157
MS.gene54029.t1	MTR_7g076990	56.757	148	59	4	71	215	41	186	5.10e-48	156
MS.gene54029.t1	MTR_4g036300	56.757	148	59	4	71	215	41	186	5.10e-48	156
MS.gene54029.t1	MTR_7g012350	56.081	148	60	4	71	215	41	186	1.11e-47	155
MS.gene54029.t1	MTR_7g076920	56.081	148	60	4	71	215	41	186	1.28e-47	155
MS.gene54029.t1	MTR_7g076770	60.938	128	48	2	89	215	61	187	1.79e-47	155
MS.gene54029.t1	MTR_7g077090	53.247	154	64	4	65	215	39	187	7.99e-47	153
MS.gene54029.t1	MTR_7g077010	52.597	154	65	4	65	215	39	187	1.00e-46	153
MS.gene54029.t1	MTR_7g012340	54.730	148	62	4	71	215	41	186	1.10e-46	153
MS.gene54029.t1	MTR_7g076960	55.102	147	62	4	71	215	39	183	2.21e-46	152
MS.gene54029.t1	MTR_7g076970	57.252	131	54	2	86	215	58	187	2.20e-45	150
MS.gene54029.t1	MTR_4g036410	57.252	131	54	2	86	215	39	168	2.75e-45	149
MS.gene54029.t1	MTR_8g031120	51.754	114	43	3	103	215	34	136	3.61e-30	109
MS.gene54029.t1	MTR_8g031150	51.754	114	43	3	103	215	42	144	2.66e-29	107
MS.gene54029.t1	MTR_8g031160	49.107	112	42	2	103	214	24	120	1.22e-26	99.8
MS.gene54029.t1	MTR_7g077040	43.966	116	38	2	86	201	36	124	1.55e-22	89.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 73 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATGTTTATGATGTTAAAA+AGG	0.240267	2.3:+6856141	None:intergenic
GTAGCTGTGTGGAATGCTTT+AGG	0.246178	2.3:-6855600	MS.gene54029:CDS
TAGCTGTGTGGAATGCTTTA+GGG	0.269715	2.3:-6855599	MS.gene54029:CDS
TGTCGTAACAATATTGTTGA+TGG	0.347026	2.3:-6855627	MS.gene54029:CDS
TGATTCCCCGTCGCACTCTA+AGG	0.365654	2.3:+6855941	None:intergenic
GAAATAGCATTTGTAAGAAA+TGG	0.387424	2.3:+6856119	None:intergenic
CGTTGTACCATCCGGTGGAC+AGG	0.400359	2.3:+6855775	None:intergenic
CATATGTTGGTCCCAACGTC+GGG	0.409197	2.3:+6856017	None:intergenic
CCAGTTACATGGTCTATGTC+TGG	0.410397	2.3:-6855552	MS.gene54029:CDS
GGCGACAAGTGTAAATCTTC+CGG	0.412697	2.3:-6855966	MS.gene54029:CDS
TTAGAATCACCGCGAGGAAC+GGG	0.413213	2.3:-6855728	MS.gene54029:CDS
TTGTCGCCACTTGGTGGTGG+AGG	0.433015	2.3:+6855981	None:intergenic
CCACTTGGTGGTGGAGGGGA+CGG	0.436308	2.3:+6855987	None:intergenic
CCAGACATAGACCATGTAAC+TGG	0.445756	2.3:+6855552	None:intergenic
GCAACGATGACCCCGACGTT+GGG	0.448979	2.3:-6856028	MS.gene54029:CDS
TGGTGGTGGAGGGGACGGTT+TGG	0.450078	2.3:+6855992	None:intergenic
CTACTCTTTCTGAGTTGCTA+TGG	0.454282	2.3:+6855802	None:intergenic
GTGGAGAGCACTTGAATTGA+GGG	0.454649	2.3:+6855916	None:intergenic
CCGGCACCTTAGAGTGCGAC+GGG	0.479301	2.3:-6855947	MS.gene54029:CDS
AGAGTAGTGGCCCTGTCCAC+CGG	0.488313	2.3:-6855786	MS.gene54029:CDS
CACTTGTCGCCACTTGGTGG+TGG	0.492715	2.3:+6855978	None:intergenic
GATTTCAGCGAGGGTGGCGA+TGG	0.507805	2.3:-6855855	MS.gene54029:CDS
GGTGGAGAGCACTTGAATTG+AGG	0.508261	2.3:+6855915	None:intergenic
TGTCGCCACTTGGTGGTGGA+GGG	0.508955	2.3:+6855982	None:intergenic
ATTAGAATCACCGCGAGGAA+CGG	0.523253	2.3:-6855729	MS.gene54029:CDS
GGACGGTTTGGTGCATATGT+TGG	0.523330	2.3:+6856004	None:intergenic
GTCGCCACTTGGTGGTGGAG+GGG	0.524109	2.3:+6855983	None:intergenic
GACCAGTGTGATTCAGTGAA+TGG	0.526043	2.3:-6855681	MS.gene54029:CDS
GATTTACACTTGTCGCCACT+TGG	0.526065	2.3:+6855972	None:intergenic
TTCAGCGAGGGTGGCGATGG+AGG	0.531365	2.3:-6855852	MS.gene54029:CDS
AATTGCTCGTCGCACTGAGA+TGG	0.531537	2.3:+6855825	None:intergenic
TTACACTTGTCGCCACTTGG+TGG	0.536650	2.3:+6855975	None:intergenic
TGAACCTCCGTTGTACCATC+CGG	0.538055	2.3:+6855767	None:intergenic
GGTCAACTCATTTGCATCAA+CGG	0.540764	2.3:-6856056	MS.gene54029:CDS
TTAGGGTTGGATACTGATGA+TGG	0.540804	2.3:-6855582	MS.gene54029:CDS
CCCGTCGCACTCTAAGGTGC+CGG	0.540944	2.3:+6855947	None:intergenic
GCTTGTGTGGAAGATGAAAC+TGG	0.550048	2.3:+6855894	None:intergenic
GAGGAGTGTGATGGCGAAAG+TGG	0.551844	2.3:-6855706	MS.gene54029:CDS
GCATATGTTGGTCCCAACGT+CGG	0.558869	2.3:+6856016	None:intergenic
GTTGTACCATCCGGTGGACA+GGG	0.562020	2.3:+6855776	None:intergenic
TGCAACGATGACCCCGACGT+TGG	0.562513	2.3:-6856029	MS.gene54029:CDS
AATGCTATTTCCTCATGCAA+TGG	0.571036	2.3:-6856107	MS.gene54029:CDS
TTGAATGATTTCAGCGAGGG+TGG	0.573268	2.3:-6855861	MS.gene54029:CDS
ATGGTGTGGTGCCAGTTACA+TGG	0.574649	2.3:-6855563	MS.gene54029:CDS
GAGGAACGGGAGGAGTGTGA+TGG	0.583244	2.3:-6855715	MS.gene54029:CDS
GAATCACCGCGAGGAACGGG+AGG	0.586047	2.3:-6855725	MS.gene54029:CDS
AAAACTCTCAACGACTGCGC+TGG	0.587040	2.3:-6856077	MS.gene54029:CDS
TTTACAAGGTCCATTGCATG+AGG	0.591735	2.3:+6856097	None:intergenic
ACGTTGAATGATTTCAGCGA+GGG	0.598557	2.3:-6855864	MS.gene54029:CDS
TCCGGCACCTTAGAGTGCGA+CGG	0.625179	2.3:-6855948	MS.gene54029:CDS
CTGTCCACCGGATGGTACAA+CGG	0.625342	2.3:-6855774	MS.gene54029:CDS
GAGTGTGATGGCGAAAGTGG+TGG	0.626341	2.3:-6855703	MS.gene54029:CDS
GTTGGATACTGATGATGGTG+TGG	0.638034	2.3:-6855577	MS.gene54029:CDS
TACAACGGAGGTTCAAGATG+TGG	0.638491	2.3:-6855759	MS.gene54029:CDS
CACACTCCTCCCGTTCCTCG+CGG	0.641101	2.3:+6855719	None:intergenic
TAGTGGCCCTGTCCACCGGA+TGG	0.641578	2.3:-6855782	MS.gene54029:CDS
GGATGTGATGAGGAACATGC+AGG	0.645551	2.3:-6855660	MS.gene54029:CDS
TGTGTGGAATGCTTTAGGGT+TGG	0.646152	2.3:-6855595	MS.gene54029:CDS
CCGTCCCCTCCACCACCAAG+TGG	0.646637	2.3:-6855987	MS.gene54029:CDS
ATCCATTCACTGAATCACAC+TGG	0.661311	2.3:+6855679	None:intergenic
CAACGTGAGTAATGCTTGTG+TGG	0.662007	2.3:+6855881	None:intergenic
ACCTCCGTTGTACCATCCGG+TGG	0.666402	2.3:+6855770	None:intergenic
TAGCAACTCAGAAAGAGTAG+TGG	0.673721	2.3:-6855799	MS.gene54029:CDS
CACGTTGAATGATTTCAGCG+AGG	0.674472	2.3:-6855865	MS.gene54029:CDS
TTCAGTGAATGGATGTGATG+AGG	0.675998	2.3:-6855670	MS.gene54029:CDS
ATATGTTGGTCCCAACGTCG+GGG	0.692316	2.3:+6856018	None:intergenic
ACAATATTGTTACGACAAGG+TGG	0.698524	2.3:+6855633	None:intergenic
TCAACAATATTGTTACGACA+AGG	0.725534	2.3:+6855630	None:intergenic
TTGATGGATCTGTAGCTGTG+TGG	0.729799	2.3:-6855611	MS.gene54029:CDS
CGGCACCTTAGAGTGCGACG+GGG	0.757349	2.3:-6855946	MS.gene54029:CDS
TCCACCGGATGGTACAACGG+AGG	0.763995	2.3:-6855771	MS.gene54029:CDS
TGTGTGGAAGATGAAACTGG+TGG	0.770461	2.3:+6855897	None:intergenic
AAATGATTAGAATCACCGCG+AGG	0.806861	2.3:-6855734	MS.gene54029:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GAATGTTTATGATGTTAAAA+AGG	+	chr2.3:6855562-6855581	None:intergenic	20.0%
!!	TATGATGTTAAAAAGGAAAA+TGG	+	chr2.3:6855555-6855574	None:intergenic	20.0%
!	GAAATAGCATTTGTAAGAAA+TGG	+	chr2.3:6855584-6855603	None:intergenic	25.0%
	TCAACAATATTGTTACGACA+AGG	+	chr2.3:6856073-6856092	None:intergenic	30.0%
	TGTCGTAACAATATTGTTGA+TGG	-	chr2.3:6856073-6856092	MS.gene54029:CDS	30.0%
	ACAATATTGTTACGACAAGG+TGG	+	chr2.3:6856070-6856089	None:intergenic	35.0%
!!	AATGCTATTTCCTCATGCAA+TGG	-	chr2.3:6855593-6855612	MS.gene54029:CDS	35.0%
	AAATGATTAGAATCACCGCG+AGG	-	chr2.3:6855966-6855985	MS.gene54029:CDS	40.0%
	ACGTTGAATGATTTCAGCGA+GGG	-	chr2.3:6855836-6855855	MS.gene54029:CDS	40.0%
	ATCCATTCACTGAATCACAC+TGG	+	chr2.3:6856024-6856043	None:intergenic	40.0%
	CTACTCTTTCTGAGTTGCTA+TGG	+	chr2.3:6855901-6855920	None:intergenic	40.0%
	GGTCAACTCATTTGCATCAA+CGG	-	chr2.3:6855644-6855663	MS.gene54029:CDS	40.0%
	TAGCAACTCAGAAAGAGTAG+TGG	-	chr2.3:6855901-6855920	MS.gene54029:CDS	40.0%
	TAGCTGTGTGGAATGCTTTA+GGG	-	chr2.3:6856101-6856120	MS.gene54029:CDS	40.0%
	TTAGGGTTGGATACTGATGA+TGG	-	chr2.3:6856118-6856137	MS.gene54029:CDS	40.0%
	TTCAGTGAATGGATGTGATG+AGG	-	chr2.3:6856030-6856049	MS.gene54029:CDS	40.0%
	TTTACAAGGTCCATTGCATG+AGG	+	chr2.3:6855606-6855625	None:intergenic	40.0%
!	CAGTCGTTGAGAGTTTTACA+AGG	+	chr2.3:6855620-6855639	None:intergenic	40.0%
	ATTAGAATCACCGCGAGGAA+CGG	-	chr2.3:6855971-6855990	MS.gene54029:CDS	45.0%
	CAACGTGAGTAATGCTTGTG+TGG	+	chr2.3:6855822-6855841	None:intergenic	45.0%
	CACGTTGAATGATTTCAGCG+AGG	-	chr2.3:6855835-6855854	MS.gene54029:CDS	45.0%
	CCAGACATAGACCATGTAAC+TGG	+	chr2.3:6856151-6856170	None:intergenic	45.0%
	CCAGTTACATGGTCTATGTC+TGG	-	chr2.3:6856148-6856167	MS.gene54029:CDS	45.0%
	GACCAGTGTGATTCAGTGAA+TGG	-	chr2.3:6856019-6856038	MS.gene54029:CDS	45.0%
	GATTTACACTTGTCGCCACT+TGG	+	chr2.3:6855731-6855750	None:intergenic	45.0%
	GCTTGTGTGGAAGATGAAAC+TGG	+	chr2.3:6855809-6855828	None:intergenic	45.0%
	GGCGACAAGTGTAAATCTTC+CGG	-	chr2.3:6855734-6855753	MS.gene54029:CDS	45.0%
	GTAGCTGTGTGGAATGCTTT+AGG	-	chr2.3:6856100-6856119	MS.gene54029:CDS	45.0%
	TACAACGGAGGTTCAAGATG+TGG	-	chr2.3:6855941-6855960	MS.gene54029:CDS	45.0%
	TGTGTGGAAGATGAAACTGG+TGG	+	chr2.3:6855806-6855825	None:intergenic	45.0%
	TTGAATGATTTCAGCGAGGG+TGG	-	chr2.3:6855839-6855858	MS.gene54029:CDS	45.0%
!	TTGATGGATCTGTAGCTGTG+TGG	-	chr2.3:6856089-6856108	MS.gene54029:CDS	45.0%
!!	GTGGAGAGCACTTGAATTGA+GGG	+	chr2.3:6855787-6855806	None:intergenic	45.0%
!!	GTTGGATACTGATGATGGTG+TGG	-	chr2.3:6856123-6856142	MS.gene54029:CDS	45.0%
!!	TGTGTGGAATGCTTTAGGGT+TGG	-	chr2.3:6856105-6856124	MS.gene54029:CDS	45.0%
	AAAACTCTCAACGACTGCGC+TGG	-	chr2.3:6855623-6855642	MS.gene54029:CDS	50.0%
	AATTGCTCGTCGCACTGAGA+TGG	+	chr2.3:6855878-6855897	None:intergenic	50.0%
	ATATGTTGGTCCCAACGTCG+GGG	+	chr2.3:6855685-6855704	None:intergenic	50.0%
	CATATGTTGGTCCCAACGTC+GGG	+	chr2.3:6855686-6855705	None:intergenic	50.0%
	GCATATGTTGGTCCCAACGT+CGG	+	chr2.3:6855687-6855706	None:intergenic	50.0%
	GGATGTGATGAGGAACATGC+AGG	-	chr2.3:6856040-6856059	MS.gene54029:CDS	50.0%
	TGAACCTCCGTTGTACCATC+CGG	+	chr2.3:6855936-6855955	None:intergenic	50.0%
	TTACACTTGTCGCCACTTGG+TGG	+	chr2.3:6855728-6855747	None:intergenic	50.0%
	TTAGAATCACCGCGAGGAAC+GGG	-	chr2.3:6855972-6855991	MS.gene54029:CDS	50.0%
!	ATGGTGTGGTGCCAGTTACA+TGG	-	chr2.3:6856137-6856156	MS.gene54029:CDS	50.0%
!!	GGACGGTTTGGTGCATATGT+TGG	+	chr2.3:6855699-6855718	None:intergenic	50.0%
!!	GGTGGAGAGCACTTGAATTG+AGG	+	chr2.3:6855788-6855807	None:intergenic	50.0%
	CTGTCCACCGGATGGTACAA+CGG	-	chr2.3:6855926-6855945	MS.gene54029:CDS	55.0%
	GTTGTACCATCCGGTGGACA+GGG	+	chr2.3:6855927-6855946	None:intergenic	55.0%
	TGATTCCCCGTCGCACTCTA+AGG	+	chr2.3:6855762-6855781	None:intergenic	55.0%
!	GAGGAGTGTGATGGCGAAAG+TGG	-	chr2.3:6855994-6856013	MS.gene54029:CDS	55.0%
!	GAGTGTGATGGCGAAAGTGG+TGG	-	chr2.3:6855997-6856016	MS.gene54029:CDS	55.0%
	ACCTCCGTTGTACCATCCGG+TGG	+	chr2.3:6855933-6855952	None:intergenic	60.0%
	AGAGTAGTGGCCCTGTCCAC+CGG	-	chr2.3:6855914-6855933	MS.gene54029:CDS	60.0%
	CGTTGTACCATCCGGTGGAC+AGG	+	chr2.3:6855928-6855947	None:intergenic	60.0%
	GATTTCAGCGAGGGTGGCGA+TGG	-	chr2.3:6855845-6855864	MS.gene54029:CDS	60.0%
	GCAACGATGACCCCGACGTT+GGG	-	chr2.3:6855672-6855691	MS.gene54029:CDS	60.0%
	TCCACCGGATGGTACAACGG+AGG	-	chr2.3:6855929-6855948	MS.gene54029:CDS	60.0%
	TCCGGCACCTTAGAGTGCGA+CGG	-	chr2.3:6855752-6855771	MS.gene54029:CDS	60.0%
	TGCAACGATGACCCCGACGT+TGG	-	chr2.3:6855671-6855690	MS.gene54029:CDS	60.0%
!	CACTTGTCGCCACTTGGTGG+TGG	+	chr2.3:6855725-6855744	None:intergenic	60.0%
!	GAGGAACGGGAGGAGTGTGA+TGG	-	chr2.3:6855985-6856004	MS.gene54029:CDS	60.0%
!!	TGTCGCCACTTGGTGGTGGA+GGG	+	chr2.3:6855721-6855740	None:intergenic	60.0%
!!	TTGTCGCCACTTGGTGGTGG+AGG	+	chr2.3:6855722-6855741	None:intergenic	60.0%
	CACACTCCTCCCGTTCCTCG+CGG	+	chr2.3:6855984-6856003	None:intergenic	65.0%
	CCGGCACCTTAGAGTGCGAC+GGG	-	chr2.3:6855753-6855772	MS.gene54029:CDS	65.0%
	CGGCACCTTAGAGTGCGACG+GGG	-	chr2.3:6855754-6855773	MS.gene54029:CDS	65.0%
	GAATCACCGCGAGGAACGGG+AGG	-	chr2.3:6855975-6855994	MS.gene54029:CDS	65.0%
	TAGTGGCCCTGTCCACCGGA+TGG	-	chr2.3:6855918-6855937	MS.gene54029:CDS	65.0%
	TTCAGCGAGGGTGGCGATGG+AGG	-	chr2.3:6855848-6855867	MS.gene54029:CDS	65.0%
!!	CCACTTGGTGGTGGAGGGGA+CGG	+	chr2.3:6855716-6855735	None:intergenic	65.0%
!!	CCCGTCGCACTCTAAGGTGC+CGG	+	chr2.3:6855756-6855775	None:intergenic	65.0%
!!	GTCGCCACTTGGTGGTGGAG+GGG	+	chr2.3:6855720-6855739	None:intergenic	65.0%
!!	TGGTGGTGGAGGGGACGGTT+TGG	+	chr2.3:6855711-6855730	None:intergenic	65.0%
	CCGTCCCCTCCACCACCAAG+TGG	-	chr2.3:6855713-6855732	MS.gene54029:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	6855518	6856204	6855518	ID=MS.gene54029
chr2.3	mRNA	6855518	6856204	6855518	ID=MS.gene54029.t1;Parent=MS.gene54029
chr2.3	exon	6855518	6856204	6855518	ID=MS.gene54029.t1.exon1;Parent=MS.gene54029.t1
chr2.3	CDS	6855518	6856204	6855518	ID=cds.MS.gene54029.t1;Parent=MS.gene54029.t1

Gene Sequence

>MS.gene54029

ATGGCTCACGTTTCAAATCTTGTTTTTTTAGCTTCCATTTTCCTTTTTAACATCATAAACATTCCATTTCTTACAAATGCTATTTCCTCATGCAATGGACCTTGTAAAACTCTCAACGACTGCGCTGGTCAACTCATTTGCATCAACGGAAAATGCAACGATGACCCCGACGTTGGGACCAACATATGCACCAAACCGTCCCCTCCACCACCAAGTGGCGACAAGTGTAAATCTTCCGGCACCTTAGAGTGCGACGGGGAATCATTCCCTCAATTCAAGTGCTCTCCACCAGTTTCATCTTCCACACAAGCATTACTCACGTTGAATGATTTCAGCGAGGGTGGCGATGGAGGAGCTCCATCTCAGTGCGACGAGCAATTCCATAGCAACTCAGAAAGAGTAGTGGCCCTGTCCACCGGATGGTACAACGGAGGTTCAAGATGTGGAAAAATGATTAGAATCACCGCGAGGAACGGGAGGAGTGTGATGGCGAAAGTGGTGGACCAGTGTGATTCAGTGAATGGATGTGATGAGGAACATGCAGGTCAGCCACCTTGTCGTAACAATATTGTTGATGGATCTGTAGCTGTGTGGAATGCTTTAGGGTTGGATACTGATGATGGTGTGGTGCCAGTTACATGGTCTATGTCTGGATCTAATGAAGCTTATGAAACATTTAATGCCTAA

Protein sequence

>MS.gene54029.t1

MAHVSNLVFLASIFLFNIINIPFLTNAISSCNGPCKTLNDCAGQLICINGKCNDDPDVGTNICTKPSPPPPSGDKCKSSGTLECDGESFPQFKCSPPVSSSTQALLTLNDFSEGGDGGAPSQCDEQFHSNSERVVALSTGWYNGGSRCGKMIRITARNGRSVMAKVVDQCDSVNGCDEEHAGQPPCRNNIVDGSVAVWNALGLDTDDGVVPVTWSMSGSNEAYETFNA