Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99062.t1 | XP_003605087.1 | 96.4 | 329 | 12 | 0 | 1 | 329 | 1 | 329 | 1.50E-179 | 638.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99062.t1 | Q40316 | 49.2 | 329 | 164 | 3 | 1 | 329 | 1 | 326 | 8.2e-89 | 328.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99062.t1 | G7JDF6 | 96.4 | 329 | 12 | 0 | 1 | 329 | 1 | 329 | 1.1e-179 | 638.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04925 | MS.gene99062 | 0.822695 | 2.06E-53 | -1.69E-46 |
| MS.gene04926 | MS.gene99062 | 0.810157 | 1.33E-50 | -1.69E-46 |
| MS.gene04927 | MS.gene99062 | 0.820542 | 6.49E-53 | -1.69E-46 |
| MS.gene049549 | MS.gene99062 | 0.857527 | 1.54E-62 | -1.69E-46 |
| MS.gene049813 | MS.gene99062 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene050095 | MS.gene99062 | 0.824637 | 7.24E-54 | -1.69E-46 |
| MS.gene050096 | MS.gene99062 | 0.827497 | 1.51E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene99062 | 0.803655 | 3.14E-49 | -1.69E-46 |
| MS.gene050479 | MS.gene99062 | 0.801772 | 7.69E-49 | -1.69E-46 |
| MS.gene050547 | MS.gene99062 | 0.803708 | 3.06E-49 | -1.69E-46 |
| MS.gene050647 | MS.gene99062 | 0.815775 | 7.78E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene99062 | 0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene051127 | MS.gene99062 | 0.801188 | 1.01E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene99062 | 0.813418 | 2.59E-51 | -1.69E-46 |
| MS.gene051385 | MS.gene99062 | 0.806738 | 7.11E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene99062 | 0.818281 | 2.13E-52 | -1.69E-46 |
| MS.gene051844 | MS.gene99062 | 0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene99062 | 0.85894 | 5.83E-63 | -1.69E-46 |
| MS.gene052212 | MS.gene99062 | 0.809352 | 1.97E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene99062 | 0.84717 | 1.37E-59 | -1.69E-46 |
| MS.gene052606 | MS.gene99062 | 0.836462 | 9.23E-57 | -1.69E-46 |
| MS.gene053031 | MS.gene99062 | 0.811832 | 5.75E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene99062 | -0.808799 | 2.59E-50 | -1.69E-46 |
| MS.gene053403 | MS.gene99062 | 0.853138 | 2.91E-61 | -1.69E-46 |
| MS.gene053406 | MS.gene99062 | 0.864632 | 1.06E-64 | -1.69E-46 |
| MS.gene053887 | MS.gene99062 | 0.809966 | 1.46E-50 | -1.69E-46 |
| MS.gene054146 | MS.gene99062 | 0.845766 | 3.31E-59 | -1.69E-46 |
| MS.gene054147 | MS.gene99062 | 0.822571 | 2.21E-53 | -1.69E-46 |
| MS.gene054277 | MS.gene99062 | 0.820172 | 7.89E-53 | -1.69E-46 |
| MS.gene054421 | MS.gene99062 | 0.813332 | 2.70E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene99062 | -0.819786 | 9.67E-53 | -1.69E-46 |
| MS.gene054742 | MS.gene99062 | 0.859209 | 4.85E-63 | -1.69E-46 |
| MS.gene05483 | MS.gene99062 | 0.805532 | 1.28E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene99062 | -0.801219 | 9.98E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene99062 | 0.812781 | 3.57E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene99062 | 0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene055240 | MS.gene99062 | 0.841087 | 5.88E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene99062 | -0.800497 | 1.40E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene99062 | -0.802452 | 5.57E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene99062 | 0.812446 | 4.22E-51 | -1.69E-46 |
| MS.gene056218 | MS.gene99062 | 0.842517 | 2.46E-58 | -1.69E-46 |
| MS.gene056330 | MS.gene99062 | 0.800202 | 1.61E-48 | -1.69E-46 |
| MS.gene056590 | MS.gene99062 | 0.818247 | 2.16E-52 | -1.69E-46 |
| MS.gene056591 | MS.gene99062 | 0.818171 | 2.25E-52 | -1.69E-46 |
| MS.gene056680 | MS.gene99062 | 0.827509 | 1.50E-54 | -1.69E-46 |
| MS.gene056748 | MS.gene99062 | 0.820807 | 5.64E-53 | -1.69E-46 |
| MS.gene056920 | MS.gene99062 | 0.820874 | 5.44E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene99062 | -0.805045 | 1.61E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene99062 | -0.803306 | 3.71E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene99062 | 0.819018 | 1.45E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene99062 | -0.805137 | 1.54E-49 | -1.69E-46 |
| MS.gene059060 | MS.gene99062 | 0.80404 | 2.61E-49 | -1.69E-46 |
| MS.gene059892 | MS.gene99062 | 0.808626 | 2.82E-50 | -1.69E-46 |
| MS.gene059953 | MS.gene99062 | 0.848719 | 5.12E-60 | -1.69E-46 |
| MS.gene059955 | MS.gene99062 | 0.834771 | 2.47E-56 | -1.69E-46 |
| MS.gene060087 | MS.gene99062 | 0.853032 | 3.12E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene99062 | -0.806522 | 7.90E-50 | -1.69E-46 |
| MS.gene061038 | MS.gene99062 | 0.820899 | 5.38E-53 | -1.69E-46 |
| MS.gene061092 | MS.gene99062 | 0.812209 | 4.76E-51 | -1.69E-46 |
| MS.gene061094 | MS.gene99062 | 0.809508 | 1.83E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99062.t1 | MTR_4g023730 | 96.353 | 329 | 12 | 0 | 1 | 329 | 1 | 329 | 0.0 | 659 |
| MS.gene99062.t1 | MTR_7g074850 | 50.453 | 331 | 160 | 3 | 1 | 329 | 1 | 329 | 6.68e-116 | 338 |
| MS.gene99062.t1 | MTR_7g074710 | 48.936 | 329 | 165 | 3 | 1 | 329 | 1 | 326 | 2.55e-115 | 337 |
| MS.gene99062.t1 | MTR_7g074880 | 50.456 | 329 | 160 | 3 | 1 | 329 | 1 | 326 | 3.03e-115 | 337 |
| MS.gene99062.t1 | MTR_7g074730 | 50.303 | 330 | 161 | 3 | 1 | 329 | 1 | 328 | 2.58e-114 | 334 |
| MS.gene99062.t1 | MTR_7g074820 | 49.849 | 331 | 162 | 3 | 1 | 329 | 1 | 329 | 3.27e-113 | 331 |
| MS.gene99062.t1 | MTR_1g022440 | 42.105 | 323 | 183 | 2 | 7 | 329 | 7 | 325 | 6.61e-97 | 290 |
| MS.gene99062.t1 | MTR_1g022445 | 41.615 | 322 | 184 | 2 | 8 | 329 | 8 | 325 | 3.11e-94 | 283 |
| MS.gene99062.t1 | MTR_7g074870 | 49.301 | 286 | 143 | 2 | 44 | 329 | 5 | 288 | 4.97e-92 | 276 |
| MS.gene99062.t1 | MTR_4g081440 | 38.166 | 338 | 184 | 7 | 9 | 329 | 25 | 354 | 1.18e-68 | 218 |
| MS.gene99062.t1 | MTR_4g081440 | 37.870 | 338 | 184 | 7 | 9 | 329 | 21 | 349 | 5.06e-68 | 217 |
| MS.gene99062.t1 | MTR_4g092080 | 35.312 | 337 | 203 | 7 | 1 | 328 | 7 | 337 | 2.07e-63 | 204 |
| MS.gene99062.t1 | MTR_2g101330 | 33.436 | 326 | 202 | 7 | 8 | 329 | 5 | 319 | 1.77e-57 | 189 |
| MS.gene99062.t1 | MTR_4g009040 | 36.418 | 335 | 186 | 12 | 3 | 329 | 8 | 323 | 7.24e-50 | 169 |
| MS.gene99062.t1 | MTR_8g062440 | 35.811 | 296 | 175 | 6 | 1 | 293 | 1 | 284 | 1.93e-49 | 168 |
| MS.gene99062.t1 | MTR_2g013230 | 31.792 | 346 | 213 | 8 | 1 | 329 | 1 | 340 | 1.99e-49 | 168 |
| MS.gene99062.t1 | MTR_3g005210 | 35.379 | 277 | 165 | 5 | 4 | 275 | 2 | 269 | 2.90e-49 | 167 |
| MS.gene99062.t1 | MTR_8g062440 | 35.816 | 282 | 171 | 5 | 1 | 279 | 1 | 275 | 8.94e-49 | 166 |
| MS.gene99062.t1 | MTR_8g062440 | 35.816 | 282 | 170 | 5 | 1 | 279 | 1 | 274 | 1.19e-48 | 166 |
| MS.gene99062.t1 | MTR_4g009040 | 35.905 | 337 | 189 | 12 | 3 | 329 | 8 | 327 | 3.17e-48 | 165 |
| MS.gene99062.t1 | MTR_3g005170 | 35.379 | 277 | 165 | 8 | 3 | 274 | 5 | 272 | 4.26e-48 | 163 |
| MS.gene99062.t1 | MTR_3g031650 | 31.138 | 334 | 199 | 10 | 8 | 329 | 5 | 319 | 4.37e-48 | 164 |
| MS.gene99062.t1 | MTR_7g117190 | 33.043 | 345 | 197 | 9 | 8 | 329 | 7 | 340 | 6.76e-48 | 164 |
| MS.gene99062.t1 | MTR_3g005170 | 35.662 | 272 | 161 | 8 | 8 | 274 | 10 | 272 | 1.21e-47 | 163 |
| MS.gene99062.t1 | MTR_5g056600 | 31.481 | 324 | 210 | 7 | 9 | 329 | 5 | 319 | 2.52e-47 | 162 |
| MS.gene99062.t1 | MTR_8g062110 | 32.862 | 283 | 177 | 5 | 1 | 279 | 2 | 275 | 9.18e-47 | 159 |
| MS.gene99062.t1 | MTR_8g062110 | 32.862 | 283 | 177 | 5 | 1 | 279 | 2 | 275 | 1.40e-46 | 159 |
| MS.gene99062.t1 | MTR_4g006940 | 34.462 | 325 | 195 | 10 | 8 | 329 | 17 | 326 | 1.57e-46 | 160 |
| MS.gene99062.t1 | MTR_8g062110 | 32.862 | 283 | 177 | 5 | 1 | 279 | 2 | 275 | 2.52e-46 | 160 |
| MS.gene99062.t1 | MTR_8g062110 | 32.862 | 283 | 177 | 5 | 1 | 279 | 11 | 284 | 2.59e-46 | 160 |
| MS.gene99062.t1 | MTR_4g077130 | 33.754 | 317 | 187 | 12 | 1 | 308 | 1 | 303 | 1.33e-45 | 158 |
| MS.gene99062.t1 | MTR_5g072620 | 32.326 | 331 | 199 | 10 | 8 | 329 | 5 | 319 | 6.10e-45 | 156 |
| MS.gene99062.t1 | MTR_2g013250 | 30.321 | 343 | 210 | 9 | 5 | 327 | 4 | 337 | 2.32e-44 | 155 |
| MS.gene99062.t1 | MTR_2g028620 | 31.953 | 338 | 205 | 14 | 2 | 329 | 4 | 326 | 6.42e-44 | 154 |
| MS.gene99062.t1 | MTR_4g009690 | 33.837 | 331 | 199 | 9 | 3 | 329 | 8 | 322 | 7.37e-43 | 150 |
| MS.gene99062.t1 | MTR_2g104960 | 33.333 | 324 | 200 | 10 | 8 | 329 | 20 | 329 | 7.89e-43 | 151 |
| MS.gene99062.t1 | MTR_3g031650 | 32.014 | 278 | 173 | 7 | 8 | 279 | 5 | 272 | 1.44e-42 | 148 |
| MS.gene99062.t1 | MTR_4g006940 | 35.036 | 274 | 162 | 8 | 8 | 278 | 17 | 277 | 1.98e-42 | 148 |
| MS.gene99062.t1 | MTR_4g006940 | 35.036 | 274 | 162 | 8 | 8 | 278 | 17 | 277 | 1.98e-42 | 148 |
| MS.gene99062.t1 | MTR_4g009690 | 33.535 | 331 | 201 | 9 | 3 | 329 | 8 | 323 | 3.92e-42 | 149 |
| MS.gene99062.t1 | MTR_4g077100 | 33.101 | 287 | 177 | 7 | 1 | 282 | 3 | 279 | 5.88e-41 | 144 |
| MS.gene99062.t1 | MTR_4g077100 | 33.101 | 287 | 177 | 7 | 1 | 282 | 3 | 279 | 2.19e-40 | 144 |
| MS.gene99062.t1 | MTR_7g117190 | 33.333 | 294 | 166 | 8 | 8 | 278 | 7 | 293 | 4.15e-40 | 143 |
| MS.gene99062.t1 | MTR_2g013260 | 30.836 | 347 | 211 | 8 | 1 | 327 | 1 | 338 | 1.35e-39 | 143 |
| MS.gene99062.t1 | MTR_2g028620 | 32.517 | 286 | 173 | 10 | 2 | 278 | 4 | 278 | 8.35e-39 | 140 |
| MS.gene99062.t1 | MTR_2g013260 | 30.872 | 298 | 181 | 7 | 1 | 278 | 1 | 293 | 4.72e-33 | 124 |
| MS.gene99062.t1 | MTR_3g005170 | 30.797 | 276 | 146 | 9 | 8 | 278 | 10 | 245 | 5.63e-33 | 124 |
| MS.gene99062.t1 | MTR_0164s0070 | 39.062 | 128 | 75 | 2 | 8 | 134 | 5 | 130 | 2.22e-25 | 101 |
| MS.gene99062.t1 | MTR_2g013230 | 28.629 | 248 | 156 | 7 | 99 | 329 | 7 | 250 | 8.85e-22 | 92.8 |
| MS.gene99062.t1 | MTR_5g029990 | 30.481 | 187 | 115 | 5 | 8 | 190 | 12 | 187 | 7.22e-20 | 88.6 |
| MS.gene99062.t1 | MTR_6g406250 | 26.978 | 278 | 179 | 9 | 5 | 271 | 52 | 316 | 4.65e-19 | 87.0 |
| MS.gene99062.t1 | MTR_7g117190 | 29.958 | 237 | 134 | 8 | 116 | 329 | 3 | 230 | 6.70e-19 | 84.3 |
| MS.gene99062.t1 | MTR_8g062110 | 27.419 | 186 | 124 | 4 | 98 | 279 | 11 | 189 | 3.19e-17 | 79.0 |
| MS.gene99062.t1 | MTR_8g062110 | 28.492 | 179 | 117 | 4 | 105 | 279 | 18 | 189 | 5.75e-17 | 79.3 |
| MS.gene99062.t1 | MTR_6g406250 | 27.397 | 219 | 145 | 6 | 5 | 216 | 52 | 263 | 2.05e-16 | 78.2 |
| MS.gene99062.t1 | MTR_2g013260 | 27.530 | 247 | 152 | 7 | 101 | 327 | 28 | 267 | 4.33e-13 | 68.9 |
| MS.gene99062.t1 | MTR_3g011130 | 36.522 | 115 | 66 | 4 | 106 | 216 | 35 | 146 | 9.82e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99062.t1 | AT2G45400 | 51.051 | 333 | 154 | 5 | 3 | 329 | 35 | 364 | 1.23e-114 | 336 |
| MS.gene99062.t1 | AT2G45400 | 52.837 | 282 | 126 | 4 | 3 | 278 | 35 | 315 | 8.76e-102 | 302 |
| MS.gene99062.t1 | AT2G45400 | 49.020 | 306 | 145 | 6 | 32 | 329 | 5 | 307 | 6.53e-95 | 284 |
| MS.gene99062.t1 | AT5G42800 | 41.337 | 329 | 189 | 2 | 1 | 329 | 1 | 325 | 4.22e-88 | 269 |
| MS.gene99062.t1 | AT2G45400 | 56.818 | 220 | 90 | 2 | 3 | 217 | 35 | 254 | 6.47e-85 | 257 |
| MS.gene99062.t1 | AT4G35420 | 36.145 | 332 | 198 | 7 | 1 | 329 | 1 | 321 | 3.17e-69 | 219 |
| MS.gene99062.t1 | AT1G61720 | 36.747 | 332 | 191 | 8 | 9 | 329 | 14 | 337 | 1.79e-62 | 202 |
| MS.gene99062.t1 | AT4G27250 | 34.795 | 342 | 189 | 9 | 2 | 320 | 7 | 337 | 3.85e-57 | 189 |
| MS.gene99062.t1 | AT4G27250 | 34.328 | 335 | 190 | 8 | 2 | 320 | 7 | 327 | 6.31e-56 | 185 |
| MS.gene99062.t1 | AT2G02400 | 31.420 | 331 | 206 | 11 | 5 | 329 | 3 | 318 | 2.96e-50 | 170 |
| MS.gene99062.t1 | AT1G09510 | 35.971 | 278 | 166 | 5 | 1 | 274 | 1 | 270 | 1.12e-49 | 168 |
| MS.gene99062.t1 | AT1G51410 | 35.125 | 279 | 169 | 7 | 4 | 278 | 5 | 275 | 1.36e-48 | 166 |
| MS.gene99062.t1 | AT5G19440 | 33.945 | 327 | 195 | 11 | 8 | 327 | 10 | 322 | 2.94e-48 | 165 |
| MS.gene99062.t1 | AT1G09480 | 33.435 | 329 | 198 | 8 | 8 | 329 | 8 | 322 | 6.86e-48 | 164 |
| MS.gene99062.t1 | AT5G58490 | 32.647 | 340 | 200 | 10 | 1 | 329 | 2 | 323 | 8.82e-48 | 164 |
| MS.gene99062.t1 | AT1G68540 | 32.099 | 324 | 208 | 7 | 10 | 329 | 6 | 321 | 2.04e-47 | 162 |
| MS.gene99062.t1 | AT1G09480 | 33.435 | 329 | 198 | 8 | 8 | 329 | 55 | 369 | 2.22e-47 | 164 |
| MS.gene99062.t1 | AT2G33590 | 34.603 | 315 | 177 | 8 | 5 | 309 | 6 | 301 | 1.49e-46 | 160 |
| MS.gene99062.t1 | AT1G66800 | 34.296 | 277 | 168 | 5 | 1 | 274 | 1 | 266 | 1.71e-46 | 160 |
| MS.gene99062.t1 | AT1G09490 | 32.727 | 330 | 199 | 8 | 8 | 329 | 8 | 322 | 7.25e-46 | 158 |
| MS.gene99062.t1 | AT1G15950 | 34.049 | 326 | 195 | 11 | 8 | 329 | 13 | 322 | 8.08e-45 | 156 |
| MS.gene99062.t1 | AT1G15950 | 34.049 | 326 | 195 | 11 | 8 | 329 | 13 | 322 | 8.08e-45 | 156 |
| MS.gene99062.t1 | AT1G76470 | 38.188 | 309 | 178 | 8 | 5 | 309 | 4 | 303 | 1.45e-44 | 155 |
| MS.gene99062.t1 | AT1G15950 | 34.076 | 314 | 188 | 10 | 8 | 317 | 13 | 311 | 1.38e-43 | 153 |
| MS.gene99062.t1 | AT1G09500 | 32.979 | 282 | 178 | 6 | 1 | 278 | 1 | 275 | 3.05e-43 | 150 |
| MS.gene99062.t1 | AT1G25460 | 30.275 | 327 | 208 | 7 | 10 | 329 | 6 | 319 | 5.20e-43 | 151 |
| MS.gene99062.t1 | AT1G09500 | 32.979 | 282 | 178 | 6 | 1 | 278 | 1 | 275 | 1.17e-42 | 150 |
| MS.gene99062.t1 | AT1G80820 | 33.435 | 329 | 201 | 11 | 4 | 329 | 4 | 317 | 1.95e-41 | 147 |
| MS.gene99062.t1 | AT1G15950 | 35.036 | 274 | 162 | 8 | 8 | 278 | 13 | 273 | 2.90e-40 | 142 |
| MS.gene99062.t1 | AT1G15950 | 35.036 | 274 | 162 | 8 | 8 | 278 | 13 | 273 | 3.84e-40 | 142 |
| MS.gene99062.t1 | AT2G33600 | 34.091 | 308 | 188 | 7 | 5 | 309 | 6 | 301 | 5.32e-40 | 143 |
| MS.gene99062.t1 | AT1G15950 | 35.036 | 274 | 162 | 8 | 8 | 278 | 13 | 273 | 7.36e-40 | 142 |
| MS.gene99062.t1 | AT1G80820 | 34.532 | 278 | 166 | 9 | 4 | 278 | 4 | 268 | 3.43e-37 | 134 |
| MS.gene99062.t1 | AT1G09490 | 29.730 | 296 | 187 | 7 | 42 | 329 | 9 | 291 | 1.26e-30 | 117 |
| MS.gene99062.t1 | AT1G09500 | 30.290 | 241 | 159 | 5 | 42 | 278 | 6 | 241 | 9.49e-28 | 110 |
| MS.gene99062.t1 | AT1G68540 | 29.545 | 220 | 146 | 5 | 113 | 329 | 1 | 214 | 9.23e-24 | 97.4 |
| MS.gene99062.t1 | AT2G23910 | 25.407 | 307 | 205 | 9 | 9 | 306 | 11 | 302 | 2.49e-22 | 95.5 |
| MS.gene99062.t1 | AT1G15950 | 31.878 | 229 | 143 | 8 | 105 | 329 | 5 | 224 | 1.46e-21 | 92.4 |
| MS.gene99062.t1 | AT2G23910 | 26.984 | 252 | 164 | 8 | 9 | 255 | 11 | 247 | 9.94e-21 | 90.5 |
| MS.gene99062.t1 | AT2G23910 | 26.984 | 252 | 164 | 8 | 9 | 255 | 11 | 247 | 1.01e-20 | 90.5 |
| MS.gene99062.t1 | AT4G30470 | 27.376 | 263 | 166 | 10 | 1 | 255 | 1 | 246 | 1.97e-19 | 87.4 |
| MS.gene99062.t1 | AT5G14700 | 28.417 | 278 | 158 | 12 | 1 | 255 | 46 | 305 | 9.42e-18 | 83.6 |
| MS.gene99062.t1 | AT5G14700 | 28.505 | 214 | 127 | 6 | 1 | 198 | 46 | 249 | 5.42e-17 | 80.5 |
Find 59 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACAGATGAAGGTATATT+AGG | 0.198356 | 4.1:-74667845 | None:intergenic |
| CCTTGTTGGATCTTCTTATT+TGG | 0.209176 | 4.1:+74667718 | MS.gene99062:CDS |
| TTTGAGTGTGAAAATGTTAA+TGG | 0.229940 | 4.1:+74668340 | MS.gene99062:CDS |
| GTTAGCTTCTTTGATGCTTC+TGG | 0.278137 | 4.1:-74667401 | None:intergenic |
| GTTAGATCACACCATGTTAA+AGG | 0.298991 | 4.1:+74665801 | MS.gene99062:CDS |
| TATGACTGAAAAGAGTGTTT+TGG | 0.313303 | 4.1:+74667751 | MS.gene99062:CDS |
| TTGGTTCTTCCTTTGGTTGT+TGG | 0.320036 | 4.1:+74667809 | MS.gene99062:CDS |
| TGTTAGTTTGGTTCTTCCTT+TGG | 0.331534 | 4.1:+74667802 | MS.gene99062:CDS |
| ATAGCACTCGCCATGATCTT+TGG | 0.336027 | 4.1:+74667869 | MS.gene99062:CDS |
| AACTTACTTTGGTATTGTTA+TGG | 0.339526 | 4.1:-74668440 | None:intergenic |
| TGAATTGAAGGTTGTTAGTT+TGG | 0.347694 | 4.1:+74667790 | MS.gene99062:CDS |
| CTTCTCTTTACAGCATTGTA+TGG | 0.353937 | 4.1:-74669613 | None:intergenic |
| AAACAGATGAAGGTATATTA+GGG | 0.372509 | 4.1:-74667844 | None:intergenic |
| TGTAAAAGTAGTAACCTTGT+TGG | 0.375771 | 4.1:+74667704 | MS.gene99062:CDS |
| AGGTATATTAGGGCAAATAA+AGG | 0.389280 | 4.1:-74667834 | None:intergenic |
| CATCCATTGGGTGTGCTAGA+TGG | 0.400667 | 4.1:-74667493 | None:intergenic |
| TGAGATACTTGTATCTATCT+TGG | 0.401199 | 4.1:-74668264 | None:intergenic |
| ATTTGTGTGACAGGAGCAAC+GGG | 0.426382 | 4.1:+74665717 | MS.gene99062:CDS |
| AGAGAAATGGAAAACGATAA+AGG | 0.427381 | 4.1:+74665690 | None:intergenic |
| AACATGCTTTCAAAATTCCT+AGG | 0.428586 | 4.1:-74667568 | None:intergenic |
| TTGCTTTGTCAAAGATATCC+AGG | 0.443021 | 4.1:+74668412 | MS.gene99062:CDS |
| CAAAACTACTTGAATCATCA+AGG | 0.450303 | 4.1:-74667439 | None:intergenic |
| AAACCAAGAGCCAGAAGAAA+AGG | 0.479277 | 4.1:+74667520 | MS.gene99062:CDS |
| TGGAAAAGTGAATGAATTGA+AGG | 0.484535 | 4.1:+74667778 | MS.gene99062:CDS |
| AAAGGTGCAATTTGTGTGAC+AGG | 0.486915 | 4.1:+74665708 | MS.gene99062:CDS |
| TGGCATCATGGCTGATTATG+AGG | 0.487871 | 4.1:+74665745 | MS.gene99062:CDS |
| GGTATATTAGGGCAAATAAA+GGG | 0.489769 | 4.1:-74667833 | None:intergenic |
| ATGTGGTGGATGAAGATGTT+TGG | 0.490382 | 4.1:+74667666 | MS.gene99062:CDS |
| GAAATACATACCAAAGATCA+TGG | 0.501496 | 4.1:-74667879 | None:intergenic |
| AAAGCAATACAAGGTTGCAT+TGG | 0.515168 | 4.1:+74667464 | MS.gene99062:CDS |
| TAAATTTGAACCCAGCATCC+AGG | 0.527299 | 4.1:-74669560 | None:intergenic |
| AGCGTCAAAGATATGTATGA+TGG | 0.533471 | 4.1:+74669588 | MS.gene99062:CDS |
| ACATGCTTTCAAAATTCCTA+GGG | 0.535454 | 4.1:-74667567 | None:intergenic |
| CAACGGGGTATGTGGCATCA+TGG | 0.536558 | 4.1:+74665733 | MS.gene99062:CDS |
| GACAGGAGCAACGGGGTATG+TGG | 0.543923 | 4.1:+74665725 | MS.gene99062:CDS |
| AGTGCTATATAAACAGATGA+AGG | 0.553611 | 4.1:-74667854 | None:intergenic |
| TTTAACATGGTGTGATCTAA+CGG | 0.553917 | 4.1:-74665799 | None:intergenic |
| CGTTATATATACCTTTAACA+TGG | 0.560160 | 4.1:-74665812 | None:intergenic |
| GGTATTGTTATGGTATACCC+TGG | 0.560996 | 4.1:-74668430 | None:intergenic |
| CAGAAATATAAGTGCACGAG+TGG | 0.561375 | 4.1:-74668317 | None:intergenic |
| AATTTGTGTGACAGGAGCAA+CGG | 0.567751 | 4.1:+74665716 | MS.gene99062:CDS |
| CATACAATGCTGTAAAGAGA+AGG | 0.570151 | 4.1:+74669614 | MS.gene99062:CDS |
| AGAGCAGTGGAAGGAACCCT+AGG | 0.577037 | 4.1:+74667551 | MS.gene99062:CDS |
| TTACACTTCTAGTGCAGCAA+CGG | 0.577130 | 4.1:+74667619 | MS.gene99062:CDS |
| GTATCTCACCAACTCATACA+TGG | 0.579056 | 4.1:+74668279 | MS.gene99062:CDS |
| TTTCCATCTAGCACACCCAA+TGG | 0.583542 | 4.1:+74667490 | MS.gene99062:CDS |
| ATTATGAGGCTTCTTCAACA+TGG | 0.593545 | 4.1:+74665759 | MS.gene99062:CDS |
| TTGAATCATCAAGGTCAGCA+TGG | 0.593822 | 4.1:-74667430 | None:intergenic |
| ATAAAGGGACCAACAACCAA+AGG | 0.611130 | 4.1:-74667818 | None:intergenic |
| AGTGTGAAAATGTTAATGGA+AGG | 0.611428 | 4.1:+74668344 | MS.gene99062:CDS |
| TGCTTTGTCAAAGATATCCA+GGG | 0.611825 | 4.1:+74668413 | MS.gene99062:CDS |
| ATACAATGCTGTAAAGAGAA+GGG | 0.620211 | 4.1:+74669615 | MS.gene99062:CDS |
| TGATAAGAATCTTGATGTGG+TGG | 0.620407 | 4.1:+74667652 | MS.gene99062:CDS |
| ATGAAATGATATTCTGTCTG+AGG | 0.636261 | 4.1:-74668377 | None:intergenic |
| CCAAATAAGAAGATCCAACA+AGG | 0.649216 | 4.1:-74667718 | None:intergenic |
| TGTGTGCACCATGTATGAGT+TGG | 0.669747 | 4.1:-74668287 | None:intergenic |
| CAATGATAAGAATCTTGATG+TGG | 0.698025 | 4.1:+74667649 | MS.gene99062:CDS |
| AACATGGTGTGATCTAACGG+TGG | 0.723533 | 4.1:-74665796 | None:intergenic |
| TTTGTGTGACAGGAGCAACG+GGG | 0.846000 | 4.1:+74665718 | MS.gene99062:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAAAAAAATTGCA+GGG | - | chr4.1:74668738-74668757 | None:intergenic | 10.0% |
| !! | TATAAAAAAAAAAAAATTGC+AGG | - | chr4.1:74668739-74668758 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTTTGTGTAAAT+CGG | - | chr4.1:74668040-74668059 | None:intergenic | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | + | chr4.1:74668618-74668637 | MS.gene99062:intron | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | - | chr4.1:74668637-74668618 | None:intergenic | 10.0% |
| !! | AAAAAATATGAAACTTACTT+TGG | - | chr4.1:74668454-74668473 | None:intergenic | 15.0% |
| !! | AAAACTATAAAAAAAATTGC+AGG | + | chr4.1:74669092-74669111 | MS.gene99062:intron | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | + | chr4.1:74669032-74669051 | MS.gene99062:intron | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | - | chr4.1:74669051-74669032 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTGCA+GGG | + | chr4.1:74669093-74669112 | MS.gene99062:intron | 15.0% |
| !! | AAATCTAAATAATGTATCTT+TGG | - | chr4.1:74669393-74669412 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | + | chr4.1:74669033-74669052 | MS.gene99062:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | - | chr4.1:74669052-74669033 | None:intergenic | 15.0% |
| !! | AGGCAAAATATTATTAAATA+GGG | + | chr4.1:74668109-74668128 | MS.gene99062:intron | 15.0% |
| !! | ATAAATTAGTGAATTATGTA+AGG | + | chr4.1:74665972-74665991 | MS.gene99062:intron | 15.0% |
| !! | ATATATATTAGGCTAAAATA+TGG | - | chr4.1:74669157-74669176 | None:intergenic | 15.0% |
| !! | CAATGACTTAATTAATATAT+AGG | + | chr4.1:74668541-74668560 | MS.gene99062:intron | 15.0% |
| !! | TAAAAATAAATTCTCATACA+AGG | - | chr4.1:74666082-74666101 | None:intergenic | 15.0% |
| !! | TAGGCAAAATATTATTAAAT+AGG | + | chr4.1:74668108-74668127 | MS.gene99062:intron | 15.0% |
| !! | TATATCTCAAATATTAGAAT+TGG | - | chr4.1:74668182-74668201 | None:intergenic | 15.0% |
| !! | TTAAAGTAAGAATAAAAAGA+AGG | - | chr4.1:74666513-74666532 | None:intergenic | 15.0% |
| !! | TTAATATATAGGCTAAAATA+TGG | + | chr4.1:74668552-74668571 | MS.gene99062:intron | 15.0% |
| !! | TTAGTCATATCATATATATT+AGG | - | chr4.1:74669168-74669187 | None:intergenic | 15.0% |
| !! | TTTATGTCATAATAATCAAT+GGG | - | chr4.1:74666872-74666891 | None:intergenic | 15.0% |
| !!! | ATATACATTTTTTTTACCTA+AGG | + | chr4.1:74667922-74667941 | MS.gene99062:intron | 15.0% |
| !!! | GCAATTTTTTTTATAGTTTT+TGG | - | chr4.1:74669092-74669111 | None:intergenic | 15.0% |
| !!! | TAAATTATCCAATTTTTTAC+TGG | - | chr4.1:74666749-74666768 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTGTGTAAATC+GGG | - | chr4.1:74668039-74668058 | None:intergenic | 15.0% |
| !!! | TTTTATGTCATAATAATCAA+TGG | - | chr4.1:74666873-74666892 | None:intergenic | 15.0% |
| !!! | TTTTTTCATCTTACAAATAT+TGG | + | chr4.1:74666320-74666339 | MS.gene99062:intron | 15.0% |
| !! | AAAATAATCACCCAAAAATT+AGG | - | chr4.1:74669479-74669498 | None:intergenic | 20.0% |
| !! | GGCAAAATATTATTAAATAG+GGG | + | chr4.1:74668110-74668129 | MS.gene99062:intron | 20.0% |
| !! | TTTGTTAGTTATCAAAATTG+AGG | + | chr4.1:74665942-74665961 | MS.gene99062:intron | 20.0% |
| !!! | AAATTGGATAATTTAAAGTG+TGG | + | chr4.1:74666754-74666773 | MS.gene99062:intron | 20.0% |
| !!! | AGTATCTTTAATTTGTTGTA+GGG | - | chr4.1:74666489-74666508 | None:intergenic | 20.0% |
| !!! | AGTTTTTAACAAAATTATGG+TGG | + | chr4.1:74669344-74669363 | MS.gene99062:intron | 20.0% |
| !!! | ATATATAACGTTCATTTTCT+TGG | + | chr4.1:74665825-74665844 | MS.gene99062:intron | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+GGG | + | chr4.1:74669004-74669023 | MS.gene99062:intron | 20.0% |
| !!! | CAAAAACAAAAATTTTTGCA+GGG | - | chr4.1:74669023-74669004 | None:intergenic | 20.0% |
| !!! | CGTAGTTTTTAACAAAATTA+TGG | + | chr4.1:74669341-74669360 | MS.gene99062:intron | 20.0% |
| !!! | TAGTATCTTTAATTTGTTGT+AGG | - | chr4.1:74666490-74666509 | None:intergenic | 20.0% |
| !!! | TTGCTATTCTTTTGTTTAAT+TGG | + | chr4.1:74665877-74665896 | MS.gene99062:intron | 20.0% |
| !!! | TTTTTTACTAATTTAGACCA+TGG | + | chr4.1:74668474-74668493 | MS.gene99062:intron | 20.0% |
| ! | AAATAAATTCTCATACAAGG+TGG | - | chr4.1:74666079-74666098 | None:intergenic | 25.0% |
| ! | AACTTACTTTGGTATTGTTA+TGG | - | chr4.1:74668443-74668462 | None:intergenic | 25.0% |
| ! | AATTATAGTAGCAATTCCTT+CGG | - | chr4.1:74667214-74667233 | None:intergenic | 25.0% |
| ! | AGTTCAATGAAGACAAAAAA+TGG | + | chr4.1:74669501-74669520 | MS.gene99062:intron | 25.0% |
| ! | ATATGTGCTATGTTTATTAC+AGG | + | chr4.1:74668238-74668257 | MS.gene99062:intron | 25.0% |
| ! | ATTAGGCTAAAATATGGTAT+TGG | - | chr4.1:74669151-74669170 | None:intergenic | 25.0% |
| ! | CAAAATATGAATTGAGAGTT+TGG | + | chr4.1:74666264-74666283 | MS.gene99062:intron | 25.0% |
| ! | CATATATGAAAACAAAGTGT+TGG | - | chr4.1:74667127-74667146 | None:intergenic | 25.0% |
| ! | CGTTATATATACCTTTAACA+TGG | - | chr4.1:74665815-74665834 | None:intergenic | 25.0% |
| ! | TAATGTATCTTTGGTTAGAT+TGG | - | chr4.1:74669384-74669403 | None:intergenic | 25.0% |
| ! | TATAGGCTAAAATATGGTAT+TGG | + | chr4.1:74668558-74668577 | MS.gene99062:intron | 25.0% |
| ! | TGACAAATCATCACATAATT+GGG | - | chr4.1:74668809-74668828 | None:intergenic | 25.0% |
| ! | TGTATTCTTATTCTCTCTAT+TGG | - | chr4.1:74666974-74666993 | None:intergenic | 25.0% |
| ! | TTTGAGTGTGAAAATGTTAA+TGG | + | chr4.1:74668340-74668359 | MS.gene99062:CDS | 25.0% |
| !! | AAACAGATGAAGGTATATTA+GGG | - | chr4.1:74667847-74667866 | None:intergenic | 25.0% |
| !! | AGACTAATATTTGACCATTT+TGG | + | chr4.1:74666681-74666700 | MS.gene99062:intron | 25.0% |
| !! | ATTAGTCTAAGTAAAGATGA+AGG | - | chr4.1:74666669-74666688 | None:intergenic | 25.0% |
| !! | CCAAAAACAAAAATTTTTGC+AGG | + | chr4.1:74669003-74669022 | MS.gene99062:intron | 25.0% |
| !! | CCAAAAACAAAAATTTTTGC+AGG | - | chr4.1:74669022-74669003 | None:intergenic | 25.0% |
| !! | TAAACAGATGAAGGTATATT+AGG | - | chr4.1:74667848-74667867 | None:intergenic | 25.0% |
| !! | TATCTAAGACATTACCAAAA+TGG | - | chr4.1:74666698-74666717 | None:intergenic | 25.0% |
| !!! | AAACTTTTTGTTTGAGTTTG+AGG | - | chr4.1:74666409-74666428 | None:intergenic | 25.0% |
| !!! | AGTCTACACAATGTATTTTT+TGG | + | chr4.1:74668518-74668537 | MS.gene99062:intron | 25.0% |
| !!! | AGTTTTGAAAAAGCAATACA+AGG | + | chr4.1:74667455-74667474 | MS.gene99062:CDS | 25.0% |
| !!! | CCTGCAAAAATTTTTGTTTT+TGG | + | chr4.1:74668769-74668788 | MS.gene99062:intron | 25.0% |
| !!! | CCTGCAAAAATTTTTGTTTT+TGG | - | chr4.1:74668788-74668769 | None:intergenic | 25.0% |
| !!! | TATCCTTTGCTATAAGTTTT+AGG | - | chr4.1:74668146-74668165 | None:intergenic | 25.0% |
| AAACGGTTTGTCTAACTTTA+TGG | + | chr4.1:74666455-74666474 | MS.gene99062:intron | 30.0% | |
| AACATGCTTTCAAAATTCCT+AGG | - | chr4.1:74667571-74667590 | None:intergenic | 30.0% | |
| AAGAAACATGTCATCTTATG+TGG | + | chr4.1:74667093-74667112 | MS.gene99062:intron | 30.0% | |
| AAGATGACATGTTTCTTATG+AGG | - | chr4.1:74667090-74667109 | None:intergenic | 30.0% | |
| ACATGCTTTCAAAATTCCTA+GGG | - | chr4.1:74667570-74667589 | None:intergenic | 30.0% | |
| AGGTATATTAGGGCAAATAA+AGG | - | chr4.1:74667837-74667856 | None:intergenic | 30.0% | |
| AGTGCTATATAAACAGATGA+AGG | - | chr4.1:74667857-74667876 | None:intergenic | 30.0% | |
| AGTGTGAAAATGTTAATGGA+AGG | + | chr4.1:74668344-74668363 | MS.gene99062:CDS | 30.0% | |
| ATACAATGCTGTAAAGAGAA+GGG | + | chr4.1:74669615-74669634 | MS.gene99062:CDS | 30.0% | |
| ATCAAAGACAGTGAAAAAAG+TGG | + | chr4.1:74667595-74667614 | MS.gene99062:CDS | 30.0% | |
| ATCTTTATAATTGTTGAGGG+AGG | + | chr4.1:74666014-74666033 | MS.gene99062:intron | 30.0% | |
| ATGAAATGATATTCTGTCTG+AGG | - | chr4.1:74668380-74668399 | None:intergenic | 30.0% | |
| ATGTCATCTTATGTGGTTTA+GGG | + | chr4.1:74667100-74667119 | MS.gene99062:intron | 30.0% | |
| ATTATAGTAGCAATTCCTTC+GGG | - | chr4.1:74667213-74667232 | None:intergenic | 30.0% | |
| CAAAAAGTTTAAGTGTGAGT+TGG | + | chr4.1:74666419-74666438 | MS.gene99062:intron | 30.0% | |
| CAAAACTACTTGAATCATCA+AGG | - | chr4.1:74667442-74667461 | None:intergenic | 30.0% | |
| CAATGATAAGAATCTTGATG+TGG | + | chr4.1:74667649-74667668 | MS.gene99062:CDS | 30.0% | |
| CATTGTGTAGACTAATTTGA+CGG | - | chr4.1:74668511-74668530 | None:intergenic | 30.0% | |
| CTACTCAACCAGTAAAAAAT+TGG | + | chr4.1:74666738-74666757 | MS.gene99062:intron | 30.0% | |
| GAAATACATACCAAAGATCA+TGG | - | chr4.1:74667882-74667901 | None:intergenic | 30.0% | |
| GACAAATCATCACATAATTG+GGG | - | chr4.1:74668808-74668827 | None:intergenic | 30.0% | |
| GATGAGAAAAAGAAATGGAA+GGG | + | chr4.1:74666046-74666065 | MS.gene99062:intron | 30.0% | |
| GGGATCTTTATAATTGTTGA+GGG | + | chr4.1:74666011-74666030 | MS.gene99062:intron | 30.0% | |
| GGTATATTAGGGCAAATAAA+GGG | - | chr4.1:74667836-74667855 | None:intergenic | 30.0% | |
| GTGACAAATCATCACATAAT+TGG | - | chr4.1:74668810-74668829 | None:intergenic | 30.0% | |
| GTTCCTAAAACTTATAGCAA+AGG | + | chr4.1:74668140-74668159 | MS.gene99062:intron | 30.0% | |
| GTTTGTCTAACTTTATGGTT+GGG | + | chr4.1:74666460-74666479 | MS.gene99062:intron | 30.0% | |
| TGAATTGAAGGTTGTTAGTT+TGG | + | chr4.1:74667790-74667809 | MS.gene99062:CDS | 30.0% | |
| TGACAAATCATCACATAACT+GGG | + | chr4.1:74668966-74668985 | MS.gene99062:intron | 30.0% | |
| TGAGATACTTGTATCTATCT+TGG | - | chr4.1:74668267-74668286 | None:intergenic | 30.0% | |
| TGATGAGAAAAAGAAATGGA+AGG | + | chr4.1:74666045-74666064 | MS.gene99062:intron | 30.0% | |
| TGGAAAAGTGAATGAATTGA+AGG | + | chr4.1:74667778-74667797 | MS.gene99062:CDS | 30.0% | |
| TGGGATCTTTATAATTGTTG+AGG | + | chr4.1:74666010-74666029 | MS.gene99062:intron | 30.0% | |
| TGTAAAAGTAGTAACCTTGT+TGG | + | chr4.1:74667704-74667723 | MS.gene99062:CDS | 30.0% | |
| TTTAACATGGTGTGATCTAA+CGG | - | chr4.1:74665802-74665821 | None:intergenic | 30.0% | |
| ! | AAAAAGCCTAGCCTAATTTT+TGG | + | chr4.1:74669465-74669484 | MS.gene99062:intron | 30.0% |
| ! | AAAAGCCTAGCCTAATTTTT+GGG | + | chr4.1:74669466-74669485 | MS.gene99062:intron | 30.0% |
| ! | ATCATAGAACGTTTTCAACT+TGG | - | chr4.1:74669239-74669258 | None:intergenic | 30.0% |
| ! | TTGTTTGAGTTTGAGGAAAA+GGG | - | chr4.1:74666402-74666421 | None:intergenic | 30.0% |
| ! | TTTGTTTGAGTTTGAGGAAA+AGG | - | chr4.1:74666403-74666422 | None:intergenic | 30.0% |
| !! | AGGAATTTTGAAAGCATGTT+TGG | + | chr4.1:74667571-74667590 | MS.gene99062:CDS | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr4.1:74669065-74669084 | MS.gene99062:intron | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | - | chr4.1:74669084-74669065 | None:intergenic | 30.0% |
| !!! | AAGGAGTTGATGTTTTGTTT+GGG | + | chr4.1:74665991-74666010 | MS.gene99062:intron | 30.0% |
| !!! | TAAGGAGTTGATGTTTTGTT+TGG | + | chr4.1:74665990-74666009 | MS.gene99062:intron | 30.0% |
| !!! | TATGACTGAAAAGAGTGTTT+TGG | + | chr4.1:74667751-74667770 | MS.gene99062:CDS | 30.0% |
| !!! | TTTTTTTTACCTAAGGTCCT+AGG | + | chr4.1:74667929-74667948 | MS.gene99062:intron | 30.0% |
| AAAGCAATACAAGGTTGCAT+TGG | + | chr4.1:74667464-74667483 | MS.gene99062:CDS | 35.0% | |
| AAGAAGAAGAAAGAGAAACG+AGG | - | chr4.1:74666205-74666224 | None:intergenic | 35.0% | |
| AAGAGAGTGAAAACTCACTT+GGG | + | chr4.1:74666993-74667012 | MS.gene99062:intron | 35.0% | |
| AATCACCCAAAAATTAGGCT+AGG | - | chr4.1:74669474-74669493 | None:intergenic | 35.0% | |
| AGCGTCAAAGATATGTATGA+TGG | + | chr4.1:74669588-74669607 | MS.gene99062:CDS | 35.0% | |
| ATAATTGTTGAGGGAGGAAA+GGG | + | chr4.1:74666020-74666039 | MS.gene99062:intron | 35.0% | |
| ATGACATGTTTCTTATGAGG+TGG | - | chr4.1:74667087-74667106 | None:intergenic | 35.0% | |
| ATTATGAGGCTTCTTCAACA+TGG | + | chr4.1:74665759-74665778 | MS.gene99062:CDS | 35.0% | |
| CATACAATGCTGTAAAGAGA+AGG | + | chr4.1:74669614-74669633 | MS.gene99062:CDS | 35.0% | |
| CATCATCTTTGTGTATTTCC+AGG | + | chr4.1:74666583-74666602 | MS.gene99062:intron | 35.0% | |
| CATGTCATCTTATGTGGTTT+AGG | + | chr4.1:74667099-74667118 | MS.gene99062:intron | 35.0% | |
| CCAAATAAGAAGATCCAACA+AGG | - | chr4.1:74667721-74667740 | None:intergenic | 35.0% | |
| CCTTGTTGGATCTTCTTATT+TGG | + | chr4.1:74667718-74667737 | MS.gene99062:CDS | 35.0% | |
| CTAAAGCTAAGAGAGACTTT+AGG | + | chr4.1:74665911-74665930 | MS.gene99062:intron | 35.0% | |
| CTGTAATGTCCCAATTTCAT+CGG | + | chr4.1:74667182-74667201 | MS.gene99062:intron | 35.0% | |
| CTTCTCTTTACAGCATTGTA+TGG | - | chr4.1:74669616-74669635 | None:intergenic | 35.0% | |
| GAAGAGTTTGTCATCCATTT+GGG | + | chr4.1:74667995-74668014 | MS.gene99062:intron | 35.0% | |
| GACAAATCATCACATAACTG+GGG | + | chr4.1:74668967-74668986 | MS.gene99062:intron | 35.0% | |
| GGCTTGATGAGAAAAAGAAA+TGG | + | chr4.1:74666041-74666060 | MS.gene99062:intron | 35.0% | |
| GGTTTGTCTAACTTTATGGT+TGG | + | chr4.1:74666459-74666478 | MS.gene99062:intron | 35.0% | |
| GTGACAAATCATCACATAAC+TGG | + | chr4.1:74668965-74668984 | MS.gene99062:intron | 35.0% | |
| GTTAGATCACACCATGTTAA+AGG | + | chr4.1:74665801-74665820 | MS.gene99062:CDS | 35.0% | |
| GTTGAGTAGCATTGCATATA+TGG | - | chr4.1:74666727-74666746 | None:intergenic | 35.0% | |
| TAAATTCTCATACAAGGTGG+TGG | - | chr4.1:74666076-74666095 | None:intergenic | 35.0% | |
| TATAATTGTTGAGGGAGGAA+AGG | + | chr4.1:74666019-74666038 | MS.gene99062:intron | 35.0% | |
| TCTATCATCAAAAAAGCTCC+TGG | + | chr4.1:74669542-74669561 | MS.gene99062:CDS | 35.0% | |
| TGACTTCGACAAAATCATAG+TGG | + | chr4.1:74669291-74669310 | MS.gene99062:intron | 35.0% | |
| TGATAAGAATCTTGATGTGG+TGG | + | chr4.1:74667652-74667671 | MS.gene99062:CDS | 35.0% | |
| TGCTTTGTCAAAGATATCCA+GGG | + | chr4.1:74668413-74668432 | MS.gene99062:CDS | 35.0% | |
| TTAAGCAGGAAGAAGGAAAA+AGG | - | chr4.1:74666374-74666393 | None:intergenic | 35.0% | |
| TTATAGTAGCAATTCCTTCG+GGG | - | chr4.1:74667212-74667231 | None:intergenic | 35.0% | |
| TTGCTTTGTCAAAGATATCC+AGG | + | chr4.1:74668412-74668431 | MS.gene99062:CDS | 35.0% | |
| TTGGACCATATCCTTGAAAA+CGG | + | chr4.1:74666438-74666457 | MS.gene99062:intron | 35.0% | |
| ! | AGTTAGACAAACCGTTTTCA+AGG | - | chr4.1:74666452-74666471 | None:intergenic | 35.0% |
| ! | CAAAACTGACCTATTTTGCA+GGG | + | chr4.1:74669124-74669143 | MS.gene99062:intron | 35.0% |
| ! | CAAAACTGTCCTATTTTGCA+GGG | - | chr4.1:74668585-74668604 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | + | chr4.1:74668705-74668724 | MS.gene99062:intron | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr4.1:74668724-74668705 | None:intergenic | 35.0% |
| ! | CTTTTTGTCACCTTTTCTTC+TGG | - | chr4.1:74667533-74667552 | None:intergenic | 35.0% |
| !! | ACAAACCGTTTTCAAGGATA+TGG | - | chr4.1:74666446-74666465 | None:intergenic | 35.0% |
| !! | ACAAGAGCGTTAAAACTCTT+CGG | + | chr4.1:74667973-74667992 | MS.gene99062:intron | 35.0% |
| !! | TGTTAGTTTGGTTCTTCCTT+TGG | + | chr4.1:74667802-74667821 | MS.gene99062:CDS | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr4.1:74668695-74668714 | MS.gene99062:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr4.1:74668714-74668695 | None:intergenic | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr4.1:74669064-74669083 | MS.gene99062:intron | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | - | chr4.1:74669083-74669064 | None:intergenic | 35.0% |
| !!! | GAAAAGAGTGTTTTGGAGTT+TGG | + | chr4.1:74667758-74667777 | MS.gene99062:CDS | 35.0% |
| !!! | TTGTCACTTTTGTGCATATG+TGG | + | chr4.1:74668823-74668842 | MS.gene99062:intron | 35.0% |
| AAACCAAGAGCCAGAAGAAA+AGG | + | chr4.1:74667520-74667539 | MS.gene99062:CDS | 40.0% | |
| AAAGGTGACAAAAAGAGCAG+TGG | + | chr4.1:74667538-74667557 | MS.gene99062:CDS | 40.0% | |
| AATTTGTGTGACAGGAGCAA+CGG | + | chr4.1:74665716-74665735 | MS.gene99062:CDS | 40.0% | |
| ATAAAGGGACCAACAACCAA+AGG | - | chr4.1:74667821-74667840 | None:intergenic | 40.0% | |
| CAAAGTTACTAGCCCATTAC+AGG | + | chr4.1:74667061-74667080 | MS.gene99062:intron | 40.0% | |
| CAAGAGAGTGAAAACTCACT+TGG | + | chr4.1:74666992-74667011 | MS.gene99062:intron | 40.0% | |
| CACAATTTCGTCATTCTTCC+TGG | - | chr4.1:74666604-74666623 | None:intergenic | 40.0% | |
| CAGAAATATAAGTGCACGAG+TGG | - | chr4.1:74668320-74668339 | None:intergenic | 40.0% | |
| GCAGGGACTAAAACTAAAAC+TGG | - | chr4.1:74668660-74668679 | None:intergenic | 40.0% | |
| GGAAGAGTTTGTCATCCATT+TGG | + | chr4.1:74667994-74668013 | MS.gene99062:intron | 40.0% | |
| GGTATTGTTATGGTATACCC+TGG | - | chr4.1:74668433-74668452 | None:intergenic | 40.0% | |
| GTATCTCACCAACTCATACA+TGG | + | chr4.1:74668279-74668298 | MS.gene99062:CDS | 40.0% | |
| TAAATTTGAACCCAGCATCC+AGG | - | chr4.1:74669563-74669582 | None:intergenic | 40.0% | |
| TCATCACATAATTGGGGTCA+TGG | - | chr4.1:74668802-74668821 | None:intergenic | 40.0% | |
| TGACGGAGTTTACAATTCCA+TGG | - | chr4.1:74668494-74668513 | None:intergenic | 40.0% | |
| TGTCTAACTTTATGGTTGGG+CGG | + | chr4.1:74666463-74666482 | MS.gene99062:intron | 40.0% | |
| TTACACTTCTAGTGCAGCAA+CGG | + | chr4.1:74667619-74667638 | MS.gene99062:CDS | 40.0% | |
| TTGAATCATCAAGGTCAGCA+TGG | - | chr4.1:74667433-74667452 | None:intergenic | 40.0% | |
| ! | AAAACTGGCCTGTATTTGCA+GGG | - | chr4.1:74668645-74668664 | None:intergenic | 40.0% |
| ! | AAAGGTGCAATTTGTGTGAC+AGG | + | chr4.1:74665708-74665727 | MS.gene99062:CDS | 40.0% |
| ! | CCAAAACTGACCTATTTTGC+AGG | + | chr4.1:74669123-74669142 | MS.gene99062:intron | 40.0% |
| ! | CCAAAACTGTCCTATTTTGC+AGG | - | chr4.1:74668586-74668605 | None:intergenic | 40.0% |
| ! | CCTGCAAAATAGGACAGTTT+TGG | + | chr4.1:74668583-74668602 | MS.gene99062:intron | 40.0% |
| ! | CCTGCAAAATAGGTCAGTTT+TGG | - | chr4.1:74669126-74669145 | None:intergenic | 40.0% |
| ! | GGAAAAGGGCAATTTTAAGC+AGG | - | chr4.1:74666388-74666407 | None:intergenic | 40.0% |
| ! | GGCAATTTTAAGCAGGAAGA+AGG | - | chr4.1:74666381-74666400 | None:intergenic | 40.0% |
| ! | GTTAGCTTCTTTGATGCTTC+TGG | - | chr4.1:74667404-74667423 | None:intergenic | 40.0% |
| ! | TAAAACTGGCCTGTATTTGC+AGG | - | chr4.1:74668646-74668665 | None:intergenic | 40.0% |
| ! | TTGGTTCTTCCTTTGGTTGT+TGG | + | chr4.1:74667809-74667828 | MS.gene99062:CDS | 40.0% |
| !! | ATGTGGTGGATGAAGATGTT+TGG | + | chr4.1:74667666-74667685 | MS.gene99062:CDS | 40.0% |
| !! | TTTTTGGTCCCTGCAAATAC+AGG | + | chr4.1:74668634-74668653 | MS.gene99062:intron | 40.0% |
| !!! | CTTGGTTTTGCACATCCATT+GGG | - | chr4.1:74667508-74667527 | None:intergenic | 40.0% |
| !!! | TCTTGGTTTTGCACATCCAT+TGG | - | chr4.1:74667509-74667528 | None:intergenic | 40.0% |
| AACATGGTGTGATCTAACGG+TGG | - | chr4.1:74665799-74665818 | None:intergenic | 45.0% | |
| ATAGCACTCGCCATGATCTT+TGG | + | chr4.1:74667869-74667888 | MS.gene99062:CDS | 45.0% | |
| ATCATCACATAACTGGGGTC+AGG | + | chr4.1:74668972-74668991 | MS.gene99062:intron | 45.0% | |
| ATTTGTGTGACAGGAGCAAC+GGG | + | chr4.1:74665717-74665736 | MS.gene99062:CDS | 45.0% | |
| CAAAAAAGCTCCTGGATGCT+GGG | + | chr4.1:74669550-74669569 | MS.gene99062:CDS | 45.0% | |
| CTTATGAGGTGGCCTGTAAT+GGG | - | chr4.1:74667076-74667095 | None:intergenic | 45.0% | |
| GCTCTTGTATGCTCAAGACT+AGG | - | chr4.1:74667961-74667980 | None:intergenic | 45.0% | |
| GTGACAAAAAGAGCAGTGGA+AGG | + | chr4.1:74667542-74667561 | MS.gene99062:CDS | 45.0% | |
| TCAAAAAAGCTCCTGGATGC+TGG | + | chr4.1:74669549-74669568 | MS.gene99062:CDS | 45.0% | |
| TCAAGACTAGGTTCGAACCT+AGG | - | chr4.1:74667949-74667968 | None:intergenic | 45.0% | |
| TCATCACATAACTGGGGTCA+GGG | + | chr4.1:74668973-74668992 | MS.gene99062:intron | 45.0% | |
| TCTTATGAGGTGGCCTGTAA+TGG | - | chr4.1:74667077-74667096 | None:intergenic | 45.0% | |
| TGGCATCATGGCTGATTATG+AGG | + | chr4.1:74665745-74665764 | MS.gene99062:CDS | 45.0% | |
| TGTGTGCACCATGTATGAGT+TGG | - | chr4.1:74668290-74668309 | None:intergenic | 45.0% | |
| TTTCCATCTAGCACACCCAA+TGG | + | chr4.1:74667490-74667509 | MS.gene99062:CDS | 45.0% | |
| ! | AAAACTCACTTGGGTTGTCC+TGG | + | chr4.1:74667002-74667021 | MS.gene99062:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr4.1:74668573-74668592 | MS.gene99062:intron | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr4.1:74668592-74668573 | None:intergenic | 45.0% |
| !! | GTGGTATTGGCTTGTGATCT+GGG | + | chr4.1:74667024-74667043 | MS.gene99062:intron | 45.0% |
| !!! | TCACCTTTTCTTCTGGCTCT+TGG | - | chr4.1:74667526-74667545 | None:intergenic | 45.0% |
| !!! | TTTATTTCTTTATTTATTAT+AGG | + | chr4.1:74668089-74668108 | MS.gene99062:intron | 5.0% |
| !!! | TTTTTTTTTTTTATAGTTTT+TGG | + | chr4.1:74668744-74668763 | MS.gene99062:intron | 5.0% |
| AGGTTCGAACCTAGGACCTT+AGG | - | chr4.1:74667941-74667960 | None:intergenic | 50.0% | |
| ATTTCATCGGATGTCCCCGA+AGG | + | chr4.1:74667195-74667214 | MS.gene99062:intron | 50.0% | |
| CATCCATTGGGTGTGCTAGA+TGG | - | chr4.1:74667496-74667515 | None:intergenic | 50.0% | |
| CGGGGACATCCGATGAAATT+GGG | - | chr4.1:74667194-74667213 | None:intergenic | 50.0% | |
| GATCACAAGCCAATACCACC+AGG | - | chr4.1:74667023-74667042 | None:intergenic | 50.0% | |
| TCGGGGACATCCGATGAAAT+TGG | - | chr4.1:74667195-74667214 | None:intergenic | 50.0% | |
| TTTGTGTGACAGGAGCAACG+GGG | + | chr4.1:74665718-74665737 | MS.gene99062:CDS | 50.0% | |
| ! | TTGGGTTGTCCTGGTGGTAT+TGG | + | chr4.1:74667011-74667030 | MS.gene99062:intron | 50.0% |
| !! | GGTGGTATTGGCTTGTGATC+TGG | + | chr4.1:74667023-74667042 | MS.gene99062:intron | 50.0% |
| AGAGCAGTGGAAGGAACCCT+AGG | + | chr4.1:74667551-74667570 | MS.gene99062:CDS | 55.0% | |
| CAACGGGGTATGTGGCATCA+TGG | + | chr4.1:74665733-74665752 | MS.gene99062:CDS | 55.0% | |
| ! | ACTCACTTGGGTTGTCCTGG+TGG | + | chr4.1:74667005-74667024 | MS.gene99062:intron | 55.0% |
| ! | GCTTGTGATCTGGGAGTGTG+CGG | + | chr4.1:74667033-74667052 | MS.gene99062:intron | 55.0% |
| !! | ATCCATTTGGGTTGCGCGTG+CGG | + | chr4.1:74668007-74668026 | MS.gene99062:intron | 55.0% |
| GACAGGAGCAACGGGGTATG+TGG | + | chr4.1:74665725-74665744 | MS.gene99062:CDS | 60.0% | |
| TTCCGCACGCGCAACCCAAA+TGG | - | chr4.1:74668012-74668031 | None:intergenic | 60.0% | |
| ! | TGTGATCTGGGAGTGTGCGG+CGG | + | chr4.1:74667036-74667055 | MS.gene99062:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 74665696 | 74669647 | 74665696 | ID=MS.gene99062 |
| chr4.1 | mRNA | 74665696 | 74669647 | 74665696 | ID=MS.gene99062.t1;Parent=MS.gene99062 |
| chr4.1 | exon | 74665696 | 74665822 | 74665696 | ID=MS.gene99062.t1.exon1;Parent=MS.gene99062.t1 |
| chr4.1 | CDS | 74665696 | 74665822 | 74665696 | ID=cds.MS.gene99062.t1;Parent=MS.gene99062.t1 |
| chr4.1 | exon | 74667369 | 74667890 | 74667369 | ID=MS.gene99062.t1.exon2;Parent=MS.gene99062.t1 |
| chr4.1 | CDS | 74667369 | 74667890 | 74667369 | ID=cds.MS.gene99062.t1;Parent=MS.gene99062.t1 |
| chr4.1 | exon | 74668260 | 74668455 | 74668260 | ID=MS.gene99062.t1.exon3;Parent=MS.gene99062.t1 |
| chr4.1 | CDS | 74668260 | 74668455 | 74668260 | ID=cds.MS.gene99062.t1;Parent=MS.gene99062.t1 |
| chr4.1 | exon | 74669503 | 74669647 | 74669503 | ID=MS.gene99062.t1.exon4;Parent=MS.gene99062.t1 |
| chr4.1 | CDS | 74669503 | 74669647 | 74669503 | ID=cds.MS.gene99062.t1;Parent=MS.gene99062.t1 |
| Gene Sequence |
| Protein sequence |
