Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37192.t1 | XP_013451106.2 | 94.8 | 155 | 8 | 0 | 1 | 155 | 1 | 155 | 2.00E-84 | 321.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37192.t1 | Q9FLV0 | 34.2 | 152 | 97 | 2 | 4 | 155 | 1 | 149 | 2.5e-19 | 96.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37192.t1 | A0A396HAK2 | 94.8 | 155 | 8 | 0 | 1 | 155 | 1 | 155 | 1.4e-84 | 321.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049147 | MS.gene37192 | 0.817067 | 4.00E-52 | -1.69E-46 |
| MS.gene049171 | MS.gene37192 | -0.819678 | 1.02E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene37192 | -0.833706 | 4.57E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene37192 | -0.822567 | 2.21E-53 | -1.69E-46 |
| MS.gene049259 | MS.gene37192 | 0.81291 | 3.34E-51 | -1.69E-46 |
| MS.gene049267 | MS.gene37192 | 0.810698 | 1.01E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene37192 | -0.805782 | 1.13E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene37192 | -0.830187 | 3.38E-55 | -1.69E-46 |
| MS.gene049549 | MS.gene37192 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene37192 | 0.821126 | 4.76E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene37192 | -0.800023 | 1.75E-48 | -1.69E-46 |
| MS.gene049634 | MS.gene37192 | 0.843247 | 1.58E-58 | -1.69E-46 |
| MS.gene050096 | MS.gene37192 | 0.805679 | 1.19E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene37192 | -0.81698 | 4.18E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene37192 | -0.805462 | 1.32E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene37192 | -0.805202 | 1.50E-49 | -1.69E-46 |
| MS.gene050380 | MS.gene37192 | 0.847232 | 1.32E-59 | -1.69E-46 |
| MS.gene050381 | MS.gene37192 | 0.881557 | 2.17E-70 | -1.69E-46 |
| MS.gene050504 | MS.gene37192 | -0.844132 | 9.14E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene37192 | -0.804963 | 1.68E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene37192 | -0.837153 | 6.15E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene37192 | -0.815966 | 7.05E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene37192 | -0.804954 | 1.69E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene37192 | 0.807101 | 5.96E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene37192 | 0.838308 | 3.11E-57 | -1.69E-46 |
| MS.gene050809 | MS.gene37192 | 0.818741 | 1.67E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene37192 | -0.82515 | 5.48E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene37192 | -0.846948 | 1.58E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene37192 | -0.84708 | 1.45E-59 | -1.69E-46 |
| MS.gene050883 | MS.gene37192 | 0.806837 | 6.78E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene37192 | -0.819077 | 1.40E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene37192 | 0.818307 | 2.10E-52 | -1.69E-46 |
| MS.gene05104 | MS.gene37192 | 0.826528 | 2.58E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene37192 | 0.846141 | 2.62E-59 | -1.69E-46 |
| MS.gene051138 | MS.gene37192 | 0.838831 | 2.28E-57 | -1.69E-46 |
| MS.gene051385 | MS.gene37192 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene05141 | MS.gene37192 | 0.818834 | 1.59E-52 | -1.69E-46 |
| MS.gene051632 | MS.gene37192 | 0.829728 | 4.38E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene37192 | -0.802649 | 5.07E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene37192 | -0.806618 | 7.54E-50 | -1.69E-46 |
| MS.gene051863 | MS.gene37192 | 0.808486 | 3.03E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene37192 | 0.811924 | 5.49E-51 | -1.69E-46 |
| MS.gene051996 | MS.gene37192 | 0.807884 | 4.06E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene37192 | -0.812887 | 3.38E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene37192 | 0.813041 | 3.13E-51 | -1.69E-46 |
| MS.gene05244 | MS.gene37192 | 0.814812 | 1.27E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene37192 | -0.806693 | 7.27E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene37192 | -0.812111 | 5.00E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene37192 | -0.815504 | 8.94E-52 | -1.69E-46 |
| MS.gene053403 | MS.gene37192 | 0.80069 | 1.28E-48 | -1.69E-46 |
| MS.gene053406 | MS.gene37192 | 0.835999 | 1.21E-56 | -1.69E-46 |
| MS.gene053420 | MS.gene37192 | 0.847646 | 1.01E-59 | -1.69E-46 |
| MS.gene053488 | MS.gene37192 | 0.853112 | 2.96E-61 | -1.69E-46 |
| MS.gene053561 | MS.gene37192 | 0.871205 | 8.16E-67 | -1.69E-46 |
| MS.gene053632 | MS.gene37192 | -0.81605 | 6.75E-52 | -1.69E-46 |
| MS.gene053887 | MS.gene37192 | 0.806798 | 6.91E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene37192 | -0.815963 | 7.06E-52 | -1.69E-46 |
| MS.gene054054 | MS.gene37192 | 0.816947 | 4.25E-52 | -1.69E-46 |
| MS.gene054056 | MS.gene37192 | 0.813714 | 2.23E-51 | -1.69E-46 |
| MS.gene054290 | MS.gene37192 | 0.820424 | 6.91E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene37192 | -0.83219 | 1.09E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene37192 | -0.805723 | 1.16E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene37192 | 0.827502 | 1.51E-54 | -1.69E-46 |
| MS.gene054708 | MS.gene37192 | 0.828337 | 9.51E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene37192 | -0.801169 | 1.02E-48 | -1.69E-46 |
| MS.gene054742 | MS.gene37192 | 0.804727 | 1.88E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene37192 | -0.807705 | 4.44E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene37192 | 0.867697 | 1.13E-65 | -1.69E-46 |
| MS.gene055154 | MS.gene37192 | 0.868534 | 6.08E-66 | -1.69E-46 |
| MS.gene055202 | MS.gene37192 | 0.840877 | 6.67E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene37192 | -0.803037 | 4.22E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene37192 | -0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene37192 | -0.839871 | 1.22E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene37192 | -0.835083 | 2.06E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene37192 | -0.801647 | 8.16E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene37192 | -0.80388 | 2.82E-49 | -1.69E-46 |
| MS.gene055959 | MS.gene37192 | 0.813625 | 2.33E-51 | -1.69E-46 |
| MS.gene056224 | MS.gene37192 | 0.807979 | 3.88E-50 | -1.69E-46 |
| MS.gene056310 | MS.gene37192 | 0.803173 | 3.96E-49 | -1.69E-46 |
| MS.gene056313 | MS.gene37192 | 0.826678 | 2.38E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene37192 | -0.8129 | 3.36E-51 | -1.69E-46 |
| MS.gene056550 | MS.gene37192 | 0.803932 | 2.75E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene37192 | -0.809397 | 1.93E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene37192 | 0.811491 | 6.82E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene37192 | 0.813532 | 2.44E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene37192 | -0.802916 | 4.47E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene37192 | 0.815366 | 9.59E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene37192 | 0.801388 | 9.22E-49 | -1.69E-46 |
| MS.gene058093 | MS.gene37192 | 0.859986 | 2.83E-63 | -1.69E-46 |
| MS.gene058099 | MS.gene37192 | 0.846251 | 2.44E-59 | -1.69E-46 |
| MS.gene058109 | MS.gene37192 | 0.827373 | 1.62E-54 | -1.69E-46 |
| MS.gene058117 | MS.gene37192 | 0.81719 | 3.75E-52 | -1.69E-46 |
| MS.gene058171 | MS.gene37192 | 0.841128 | 5.73E-58 | -1.69E-46 |
| MS.gene058173 | MS.gene37192 | 0.829552 | 4.83E-55 | -1.69E-46 |
| MS.gene058175 | MS.gene37192 | 0.840859 | 6.74E-58 | -1.69E-46 |
| MS.gene058269 | MS.gene37192 | 0.803397 | 3.55E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene37192 | -0.808831 | 2.55E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene37192 | -0.815232 | 1.03E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene37192 | 0.832246 | 1.05E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene37192 | -0.810052 | 1.40E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene37192 | 0.868587 | 5.84E-66 | -1.69E-46 |
| MS.gene059022 | MS.gene37192 | -0.832941 | 7.09E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene37192 | -0.800389 | 1.47E-48 | -1.69E-46 |
| MS.gene059037 | MS.gene37192 | 0.823727 | 1.19E-53 | -1.69E-46 |
| MS.gene059038 | MS.gene37192 | 0.809409 | 1.92E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene37192 | 0.839064 | 1.98E-57 | -1.69E-46 |
| MS.gene059223 | MS.gene37192 | 0.817513 | 3.17E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene37192 | -0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene37192 | -0.82039 | 7.03E-53 | -1.69E-46 |
| MS.gene059682 | MS.gene37192 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene37192 | 0.81493 | 1.20E-51 | -1.69E-46 |
| MS.gene059691 | MS.gene37192 | 0.821441 | 4.03E-53 | -1.69E-46 |
| MS.gene059694 | MS.gene37192 | 0.825106 | 5.62E-54 | -1.69E-46 |
| MS.gene059697 | MS.gene37192 | 0.836612 | 8.45E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene37192 | -0.824959 | 6.08E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene37192 | -0.830349 | 3.09E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene37192 | -0.811255 | 7.67E-51 | -1.69E-46 |
| MS.gene059916 | MS.gene37192 | 0.821501 | 3.90E-53 | -1.69E-46 |
| MS.gene059943 | MS.gene37192 | 0.802092 | 6.61E-49 | -1.69E-46 |
| MS.gene060205 | MS.gene37192 | 0.807583 | 4.71E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene37192 | -0.809127 | 2.21E-50 | -1.69E-46 |
| MS.gene06074 | MS.gene37192 | 0.821565 | 3.77E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene37192 | -0.811043 | 8.53E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene37192 | -0.81674 | 4.73E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37192.t1 | MTR_6g015950 | 94.737 | 152 | 8 | 0 | 4 | 155 | 1 | 152 | 1.47e-108 | 312 |
| MS.gene37192.t1 | MTR_7g016090 | 59.868 | 152 | 60 | 1 | 4 | 155 | 3 | 153 | 1.18e-62 | 196 |
| MS.gene37192.t1 | MTR_7g016090 | 59.868 | 152 | 60 | 1 | 4 | 155 | 1 | 151 | 1.23e-62 | 196 |
| MS.gene37192.t1 | MTR_7g016080 | 55.844 | 154 | 65 | 2 | 4 | 155 | 1 | 153 | 2.97e-56 | 179 |
| MS.gene37192.t1 | MTR_1g070120 | 44.516 | 155 | 81 | 3 | 4 | 155 | 1 | 153 | 1.14e-39 | 137 |
| MS.gene37192.t1 | MTR_1g070135 | 43.871 | 155 | 82 | 3 | 4 | 155 | 1 | 153 | 2.05e-38 | 132 |
| MS.gene37192.t1 | MTR_1g070135 | 43.871 | 155 | 82 | 3 | 4 | 155 | 1 | 153 | 6.10e-38 | 132 |
| MS.gene37192.t1 | MTR_1g070080 | 44.156 | 154 | 80 | 4 | 6 | 155 | 2 | 153 | 1.98e-37 | 131 |
| MS.gene37192.t1 | MTR_1g070085 | 42.484 | 153 | 83 | 3 | 6 | 155 | 2 | 152 | 2.55e-33 | 120 |
| MS.gene37192.t1 | MTR_1g070085 | 42.484 | 153 | 83 | 3 | 6 | 155 | 2 | 152 | 2.55e-33 | 120 |
| MS.gene37192.t1 | MTR_8g024120 | 31.447 | 159 | 102 | 4 | 1 | 155 | 1 | 156 | 4.23e-22 | 90.5 |
| MS.gene37192.t1 | MTR_3g092890 | 30.263 | 152 | 103 | 2 | 4 | 155 | 1 | 149 | 2.35e-19 | 83.2 |
| MS.gene37192.t1 | MTR_7g081710 | 34.722 | 144 | 87 | 3 | 17 | 155 | 23 | 164 | 2.79e-19 | 82.8 |
| MS.gene37192.t1 | MTR_1g048940 | 32.394 | 142 | 91 | 2 | 17 | 155 | 22 | 161 | 1.29e-18 | 81.3 |
| MS.gene37192.t1 | MTR_3g072820 | 32.237 | 152 | 100 | 3 | 6 | 155 | 5 | 155 | 1.38e-18 | 80.9 |
| MS.gene37192.t1 | MTR_5g059130 | 28.931 | 159 | 107 | 5 | 1 | 155 | 1 | 157 | 6.56e-15 | 70.9 |
| MS.gene37192.t1 | MTR_5g022020 | 28.846 | 156 | 101 | 4 | 7 | 156 | 5 | 156 | 8.83e-15 | 70.5 |
| MS.gene37192.t1 | MTR_1g062110 | 29.452 | 146 | 93 | 3 | 19 | 156 | 38 | 181 | 9.84e-15 | 70.1 |
| MS.gene37192.t1 | MTR_1g062110 | 29.452 | 146 | 93 | 3 | 19 | 156 | 38 | 181 | 1.09e-14 | 70.5 |
| MS.gene37192.t1 | MTR_3g072810 | 27.815 | 151 | 106 | 3 | 6 | 155 | 4 | 152 | 1.14e-14 | 70.1 |
| MS.gene37192.t1 | MTR_3g070860 | 32.075 | 159 | 93 | 6 | 7 | 155 | 14 | 167 | 1.33e-14 | 70.1 |
| MS.gene37192.t1 | MTR_5g082750 | 32.704 | 159 | 92 | 5 | 7 | 155 | 13 | 166 | 1.84e-14 | 69.7 |
| MS.gene37192.t1 | MTR_4g015790 | 32.500 | 160 | 84 | 6 | 17 | 155 | 23 | 179 | 1.43e-13 | 67.0 |
| MS.gene37192.t1 | MTR_7g068650 | 30.921 | 152 | 90 | 6 | 17 | 156 | 24 | 172 | 2.13e-13 | 66.6 |
| MS.gene37192.t1 | MTR_8g075890 | 31.250 | 144 | 90 | 3 | 18 | 155 | 15 | 155 | 3.00e-13 | 66.2 |
| MS.gene37192.t1 | MTR_5g032870 | 32.168 | 143 | 82 | 6 | 18 | 150 | 14 | 151 | 3.93e-13 | 65.9 |
| MS.gene37192.t1 | MTR_5g059140 | 28.276 | 145 | 97 | 4 | 16 | 155 | 15 | 157 | 4.33e-13 | 65.9 |
| MS.gene37192.t1 | MTR_7g102820 | 27.397 | 146 | 95 | 3 | 19 | 155 | 38 | 181 | 5.09e-13 | 65.5 |
| MS.gene37192.t1 | MTR_5g032880 | 29.927 | 137 | 83 | 4 | 18 | 149 | 14 | 142 | 1.51e-12 | 64.3 |
| MS.gene37192.t1 | MTR_5g032880 | 28.387 | 155 | 94 | 4 | 9 | 150 | 339 | 489 | 5.04e-11 | 60.1 |
| MS.gene37192.t1 | MTR_8g075830 | 28.472 | 144 | 94 | 3 | 18 | 155 | 15 | 155 | 1.79e-12 | 63.9 |
| MS.gene37192.t1 | MTR_3g091360 | 33.594 | 128 | 74 | 4 | 34 | 155 | 44 | 166 | 3.93e-12 | 63.2 |
| MS.gene37192.t1 | MTR_2g068850 | 28.358 | 134 | 93 | 3 | 19 | 150 | 33 | 165 | 4.41e-12 | 62.0 |
| MS.gene37192.t1 | MTR_1g034140 | 31.373 | 153 | 86 | 5 | 17 | 155 | 2 | 149 | 9.87e-12 | 62.0 |
| MS.gene37192.t1 | MTR_3g091350 | 31.250 | 128 | 77 | 4 | 34 | 155 | 51 | 173 | 1.26e-11 | 61.6 |
| MS.gene37192.t1 | MTR_2g068840 | 28.358 | 134 | 93 | 3 | 19 | 150 | 33 | 165 | 1.64e-11 | 61.2 |
| MS.gene37192.t1 | MTR_5g065010 | 31.013 | 158 | 89 | 7 | 6 | 154 | 5 | 151 | 1.83e-11 | 61.2 |
| MS.gene37192.t1 | MTR_7g062570 | 31.724 | 145 | 88 | 6 | 17 | 155 | 29 | 168 | 3.60e-11 | 60.5 |
| MS.gene37192.t1 | MTR_7g062550 | 34.746 | 118 | 67 | 5 | 39 | 151 | 57 | 169 | 4.44e-11 | 60.1 |
| MS.gene37192.t1 | MTR_7g029655 | 32.479 | 117 | 74 | 3 | 19 | 133 | 45 | 158 | 7.46e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37192.t1 | AT5G24530 | 34.211 | 152 | 97 | 2 | 4 | 155 | 1 | 149 | 3.58e-24 | 96.3 |
| MS.gene37192.t1 | AT5G08640 | 34.161 | 161 | 95 | 4 | 1 | 155 | 1 | 156 | 2.33e-19 | 83.2 |
| MS.gene37192.t1 | AT5G08640 | 34.161 | 161 | 95 | 4 | 1 | 155 | 1 | 156 | 2.33e-19 | 83.2 |
| MS.gene37192.t1 | AT2G44800 | 31.707 | 164 | 101 | 4 | 1 | 155 | 6 | 167 | 3.39e-19 | 82.8 |
| MS.gene37192.t1 | AT5G07480 | 31.690 | 142 | 87 | 4 | 19 | 155 | 24 | 160 | 5.68e-19 | 82.4 |
| MS.gene37192.t1 | AT4G10500 | 31.410 | 156 | 100 | 4 | 4 | 155 | 6 | 158 | 1.43e-18 | 81.3 |
| MS.gene37192.t1 | AT4G10490 | 31.579 | 152 | 98 | 3 | 8 | 155 | 7 | 156 | 3.58e-16 | 74.3 |
| MS.gene37192.t1 | AT5G63590 | 33.898 | 118 | 76 | 2 | 38 | 154 | 10 | 126 | 6.49e-16 | 73.6 |
| MS.gene37192.t1 | AT5G63600 | 30.070 | 143 | 89 | 4 | 14 | 155 | 8 | 140 | 1.37e-15 | 72.8 |
| MS.gene37192.t1 | AT5G63600 | 30.070 | 143 | 89 | 4 | 14 | 155 | 8 | 140 | 1.40e-15 | 72.8 |
| MS.gene37192.t1 | AT5G63580 | 32.773 | 119 | 76 | 3 | 39 | 156 | 16 | 131 | 2.38e-15 | 71.2 |
| MS.gene37192.t1 | AT5G63580 | 32.773 | 119 | 76 | 3 | 39 | 156 | 16 | 131 | 2.40e-15 | 70.9 |
| MS.gene37192.t1 | AT3G60290 | 32.168 | 143 | 89 | 3 | 19 | 155 | 27 | 167 | 4.59e-15 | 71.2 |
| MS.gene37192.t1 | AT5G63595 | 32.824 | 131 | 78 | 5 | 26 | 155 | 11 | 132 | 1.25e-14 | 69.7 |
| MS.gene37192.t1 | AT3G51240 | 31.206 | 141 | 88 | 3 | 17 | 151 | 13 | 150 | 1.79e-14 | 69.7 |
| MS.gene37192.t1 | AT3G55970 | 34.395 | 157 | 84 | 6 | 9 | 151 | 14 | 165 | 9.52e-14 | 67.4 |
| MS.gene37192.t1 | AT3G55970 | 34.395 | 157 | 84 | 6 | 9 | 151 | 14 | 165 | 1.18e-13 | 67.4 |
| MS.gene37192.t1 | AT3G12900 | 35.294 | 136 | 84 | 2 | 17 | 149 | 31 | 165 | 1.35e-13 | 67.4 |
| MS.gene37192.t1 | AT3G13610 | 30.303 | 132 | 90 | 2 | 18 | 148 | 37 | 167 | 1.41e-13 | 67.4 |
| MS.gene37192.t1 | AT1G06640 | 37.615 | 109 | 57 | 3 | 40 | 139 | 62 | 168 | 4.10e-13 | 65.9 |
| MS.gene37192.t1 | AT1G06640 | 38.000 | 100 | 54 | 2 | 40 | 133 | 62 | 159 | 4.12e-13 | 65.5 |
| MS.gene37192.t1 | AT2G36690 | 30.370 | 135 | 88 | 3 | 25 | 155 | 43 | 175 | 4.44e-13 | 65.9 |
| MS.gene37192.t1 | AT2G36690 | 30.370 | 135 | 88 | 3 | 25 | 155 | 43 | 175 | 4.44e-13 | 65.9 |
| MS.gene37192.t1 | AT1G06640 | 38.000 | 100 | 54 | 2 | 40 | 133 | 62 | 159 | 4.60e-13 | 65.9 |
| MS.gene37192.t1 | AT1G55290 | 30.303 | 132 | 89 | 2 | 19 | 148 | 37 | 167 | 1.21e-12 | 64.7 |
| MS.gene37192.t1 | AT5G05600 | 31.544 | 149 | 87 | 6 | 17 | 155 | 36 | 179 | 1.53e-12 | 63.9 |
| MS.gene37192.t1 | AT5G05600 | 31.544 | 149 | 87 | 6 | 17 | 155 | 36 | 179 | 2.13e-12 | 63.9 |
| MS.gene37192.t1 | AT5G43935 | 30.769 | 117 | 76 | 3 | 39 | 154 | 16 | 128 | 3.68e-12 | 62.8 |
| MS.gene37192.t1 | AT1G06620 | 33.094 | 139 | 74 | 6 | 17 | 142 | 36 | 168 | 4.12e-11 | 59.7 |
| MS.gene37192.t1 | AT1G06645 | 34.259 | 108 | 59 | 3 | 40 | 139 | 75 | 178 | 4.68e-11 | 60.1 |
| MS.gene37192.t1 | AT1G06620 | 33.094 | 139 | 74 | 6 | 17 | 142 | 36 | 168 | 4.96e-11 | 60.1 |
| MS.gene37192.t1 | AT2G38240 | 31.690 | 142 | 90 | 4 | 18 | 155 | 22 | 160 | 7.01e-11 | 59.7 |
Find 46 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTAATTTACCGGTATTT+AGG | 0.189458 | 6.2:+10787254 | None:intergenic |
| CTGGAGAATTCATGGAGTTT+TGG | 0.201882 | 6.2:-10787289 | MS.gene37192:CDS |
| AATATTGAACAGCATCTATT+TGG | 0.241718 | 6.2:+10787345 | None:intergenic |
| TGGAGTTTCCAAGGATTTAA+TGG | 0.247095 | 6.2:-10787486 | MS.gene37192:CDS |
| TTGAAAGCTTCTGAAGAATA+TGG | 0.255261 | 6.2:-10788417 | MS.gene37192:CDS |
| AGCTTTCAAAATTTGCATTA+TGG | 0.297714 | 6.2:+10788431 | None:intergenic |
| AAATAGATGCTGTTCAATAT+TGG | 0.342734 | 6.2:-10787343 | MS.gene37192:CDS |
| AGCTTACAATTAATTCCATT+TGG | 0.356869 | 6.2:+10787389 | None:intergenic |
| TCCTCCCTCTGGAGAATTCA+TGG | 0.359193 | 6.2:-10787297 | MS.gene37192:CDS |
| ACTATACCCTTGATTGATCT+TGG | 0.382857 | 6.2:-10788474 | MS.gene37192:CDS |
| GGCTTCATCCATTAAATCCT+TGG | 0.384348 | 6.2:+10787478 | None:intergenic |
| GAACTCTTTGAAAATATTGA+AGG | 0.401853 | 6.2:+10787457 | None:intergenic |
| GAAGGGTTTGTGACCTTACC+AGG | 0.429829 | 6.2:+10788504 | None:intergenic |
| AAGGGTATAGTCTTACTTGA+AGG | 0.443875 | 6.2:+10788486 | None:intergenic |
| ATTTCCACCAAGATCAATCA+AGG | 0.496046 | 6.2:+10788467 | None:intergenic |
| TATTATATTTAAGTCGTTGA+GGG | 0.506462 | 6.2:-10787139 | None:intergenic |
| AGGGTATAGTCTTACTTGAA+GGG | 0.516611 | 6.2:+10788487 | None:intergenic |
| ACACACCCTTGTCCTCCCTC+TGG | 0.521134 | 6.2:-10787308 | MS.gene37192:CDS |
| TTTCCTTTGGAGGCATGGCA+TGG | 0.523508 | 6.2:+10787435 | None:intergenic |
| GAATGCTCTAAAGATCCAAA+TGG | 0.524250 | 6.2:-10787404 | MS.gene37192:CDS |
| AACAAAGGCTTATCTCAAGT+TGG | 0.528594 | 6.2:-10788581 | MS.gene37192:CDS |
| CGGTATTTAGGTGGTTTCTG+AGG | 0.539734 | 6.2:+10787266 | None:intergenic |
| GATCAACCATGGAGTTTCCA+AGG | 0.539912 | 6.2:-10787495 | MS.gene37192:CDS |
| AATTCTCCAGAGGGAGGACA+AGG | 0.540964 | 6.2:+10787302 | None:intergenic |
| CTCAGAAACCACCTAAATAC+CGG | 0.542839 | 6.2:-10787265 | MS.gene37192:intron |
| ATACCCTTGATTGATCTTGG+TGG | 0.543792 | 6.2:-10788471 | MS.gene37192:CDS |
| CATAGGAGTTATGGAAACAA+TGG | 0.551764 | 6.2:-10788604 | None:intergenic |
| ACTAGAGTGTAGACCTGGTA+AGG | 0.555383 | 6.2:-10788517 | MS.gene37192:CDS |
| TTAAATCCTTGGAAACTCCA+TGG | 0.561347 | 6.2:+10787489 | None:intergenic |
| TCTAGTGGTTGGACAAAAGA+AGG | 0.570416 | 6.2:+10788534 | None:intergenic |
| ATATTATATTTAAGTCGTTG+AGG | 0.584229 | 6.2:-10787140 | None:intergenic |
| TTAATTTACCGGTATTTAGG+TGG | 0.584318 | 6.2:+10787257 | None:intergenic |
| ATGAAATAGGTGATCAACCA+TGG | 0.586511 | 6.2:-10787506 | MS.gene37192:intron |
| GTTCCATGCCATGCCTCCAA+AGG | 0.593751 | 6.2:-10787438 | MS.gene37192:CDS |
| CAGGTCTACACTCTAGTGGT+TGG | 0.595462 | 6.2:+10788523 | None:intergenic |
| AGATGCTGTTCAATATTGGA+AGG | 0.600937 | 6.2:-10787339 | MS.gene37192:CDS |
| CAACCACTAGAGTGTAGACC+TGG | 0.616612 | 6.2:-10788522 | MS.gene37192:CDS |
| AACTCCATGAATTCTCCAGA+GGG | 0.617098 | 6.2:+10787293 | None:intergenic |
| TTATGGAAACAATGGAACAA+AGG | 0.638230 | 6.2:-10788596 | MS.gene37192:CDS |
| TTACCAGGTCTACACTCTAG+TGG | 0.640740 | 6.2:+10788519 | None:intergenic |
| GACAAAAGAAGGTGGAACTG+AGG | 0.661120 | 6.2:+10788545 | None:intergenic |
| TCCATGAATTCTCCAGAGGG+AGG | 0.667889 | 6.2:+10787296 | None:intergenic |
| TTTCCACCAAGATCAATCAA+GGG | 0.674426 | 6.2:+10788468 | None:intergenic |
| AAACTCCATGAATTCTCCAG+AGG | 0.678023 | 6.2:+10787292 | None:intergenic |
| AGTGGTTGGACAAAAGAAGG+TGG | 0.680548 | 6.2:+10788537 | None:intergenic |
| ATTCTCCAGAGGGAGGACAA+GGG | 0.726732 | 6.2:+10787303 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAAATAATTAATTTAC+CGG | + | chr6.2:10788493-10788512 | None:intergenic | 10.0% |
| !! | TTCTTTATTAACTTAAAAAA+TGG | - | chr6.2:10787578-10787597 | MS.gene37192:intron | 10.0% |
| !! | AAAAAATGACTTCAAAATAT+AGG | + | chr6.2:10788545-10788564 | None:intergenic | 15.0% |
| !! | AAACTAAAAAACTATGAAAT+AGG | - | chr6.2:10788217-10788236 | MS.gene37192:intron | 15.0% |
| !! | ACGACTTAAATATAATATAT+TGG | + | chr6.2:10788594-10788613 | None:intergenic | 15.0% |
| !! | ATTAATATTAATCTTTCTTG+TGG | + | chr6.2:10787882-10787901 | None:intergenic | 15.0% |
| !! | CAAAAGAAATATATTGAAAA+AGG | - | chr6.2:10787931-10787950 | MS.gene37192:intron | 15.0% |
| !! | CAAGTAAAAACAAAATAAAA+TGG | + | chr6.2:10788154-10788173 | None:intergenic | 15.0% |
| !! | TTAATATTAATCTTTCTTGT+GGG | + | chr6.2:10787881-10787900 | None:intergenic | 15.0% |
| !!! | GACTTGAAAATTTTATATTA+TGG | - | chr6.2:10787622-10787641 | MS.gene37192:intron | 15.0% |
| !!! | TTTTTAACTAATATACCATT+TGG | - | chr6.2:10788560-10788579 | MS.gene37192:CDS | 15.0% |
| !! | AGAATATTCATAGATATTCA+TGG | - | chr6.2:10787468-10787487 | MS.gene37192:CDS | 20.0% |
| !! | ATATTGGAAAAATATCCAAA+TGG | + | chr6.2:10788578-10788597 | None:intergenic | 20.0% |
| !! | TAATTAATTTACCGGTATTT+AGG | + | chr6.2:10788485-10788504 | None:intergenic | 20.0% |
| !!! | CATGCTTAAACAATAATTTT+AGG | + | chr6.2:10788186-10788205 | None:intergenic | 20.0% |
| ! | AAATAGATGCTGTTCAATAT+TGG | - | chr6.2:10788393-10788412 | MS.gene37192:intron | 25.0% |
| ! | AATATTGAACAGCATCTATT+TGG | + | chr6.2:10788394-10788413 | None:intergenic | 25.0% |
| ! | AGCTTACAATTAATTCCATT+TGG | + | chr6.2:10788350-10788369 | None:intergenic | 25.0% |
| ! | AGCTTTCAAAATTTGCATTA+TGG | + | chr6.2:10787308-10787327 | None:intergenic | 25.0% |
| ! | ATACTGGTGAATTGATAAAA+AGG | + | chr6.2:10787789-10787808 | None:intergenic | 25.0% |
| ! | CTCTTGAATACTAATTAAGA+AGG | - | chr6.2:10787418-10787437 | MS.gene37192:CDS | 25.0% |
| ! | CTTCTTAATTAGTATTCAAG+AGG | + | chr6.2:10787420-10787439 | None:intergenic | 25.0% |
| ! | GATCAAATCAAAATTTGTCT+TGG | - | chr6.2:10787600-10787619 | MS.gene37192:intron | 25.0% |
| ! | GGAAGAACTAACAATATATA+TGG | + | chr6.2:10788524-10788543 | None:intergenic | 25.0% |
| ! | TCCTTAAGAAATTTCTCATT+TGG | + | chr6.2:10787723-10787742 | None:intergenic | 25.0% |
| ! | TGACAAATGTTAGTAATTAG+CGG | + | chr6.2:10787909-10787928 | None:intergenic | 25.0% |
| !! | AAAAGATCATCTTTTTATCG+TGG | - | chr6.2:10788018-10788037 | MS.gene37192:intron | 25.0% |
| !! | GAACTCTTTGAAAATATTGA+AGG | + | chr6.2:10788282-10788301 | None:intergenic | 25.0% |
| !!! | TGAAGAATATGGTTTTTTTC+AGG | - | chr6.2:10787330-10787349 | MS.gene37192:CDS | 25.0% |
| GCCAAATGAGAAATTTCTTA+AGG | - | chr6.2:10787719-10787738 | MS.gene37192:intron | 30.0% | |
| TAAGAAATTTCTCATTTGGC+AGG | + | chr6.2:10787719-10787738 | None:intergenic | 30.0% | |
| TCTTCATAATCTTGAATGCT+GGG | + | chr6.2:10787656-10787675 | None:intergenic | 30.0% | |
| TTAATTTACCGGTATTTAGG+TGG | + | chr6.2:10788482-10788501 | None:intergenic | 30.0% | |
| TTCTTCATAATCTTGAATGC+TGG | + | chr6.2:10787657-10787676 | None:intergenic | 30.0% | |
| ! | CATCTTGATCTTTTATGCTT+AGG | - | chr6.2:10787974-10787993 | MS.gene37192:intron | 30.0% |
| ! | CATTCACTTATCTTTTCCTT+TGG | + | chr6.2:10788317-10788336 | None:intergenic | 30.0% |
| ! | TCAATTCACCAGTATTGAAA+AGG | - | chr6.2:10787794-10787813 | MS.gene37192:intron | 30.0% |
| ! | TCATCTTTTTATCGTGGTAT+AGG | - | chr6.2:10788024-10788043 | MS.gene37192:intron | 30.0% |
| ! | TTGAAAGCTTCTGAAGAATA+TGG | - | chr6.2:10787319-10787338 | MS.gene37192:CDS | 30.0% |
| !! | ACCAGTATTGAAAAGGTTTT+GGG | - | chr6.2:10787801-10787820 | MS.gene37192:intron | 30.0% |
| !! | GTTATTTCTCAAATTGAGCT+TGG | + | chr6.2:10787767-10787786 | None:intergenic | 30.0% |
| AACAAAGGCTTATCTCAAGT+TGG | - | chr6.2:10787155-10787174 | MS.gene37192:intron | 35.0% | |
| ACTATACCCTTGATTGATCT+TGG | - | chr6.2:10787262-10787281 | MS.gene37192:intron | 35.0% | |
| AGATGCTGTTCAATATTGGA+AGG | - | chr6.2:10788397-10788416 | MS.gene37192:intron | 35.0% | |
| ATGAAATAGGTGATCAACCA+TGG | - | chr6.2:10788230-10788249 | MS.gene37192:intron | 35.0% | |
| ATTTCCACCAAGATCAATCA+AGG | + | chr6.2:10787272-10787291 | None:intergenic | 35.0% | |
| CTTCATAATCTTGAATGCTG+GGG | + | chr6.2:10787655-10787674 | None:intergenic | 35.0% | |
| TGGAGTTTCCAAGGATTTAA+TGG | - | chr6.2:10788250-10788269 | MS.gene37192:intron | 35.0% | |
| TTAAATCCTTGGAAACTCCA+TGG | + | chr6.2:10788250-10788269 | None:intergenic | 35.0% | |
| TTCTCAAATTGAGCTTGGAA+AGG | + | chr6.2:10787762-10787781 | None:intergenic | 35.0% | |
| TTTCCACCAAGATCAATCAA+GGG | + | chr6.2:10787271-10787290 | None:intergenic | 35.0% | |
| ! | AAGGGTATAGTCTTACTTGA+AGG | + | chr6.2:10787253-10787272 | None:intergenic | 35.0% |
| ! | AGGGTATAGTCTTACTTGAA+GGG | + | chr6.2:10787252-10787271 | None:intergenic | 35.0% |
| ! | TCACTTATCTTTTCCTTTGG+AGG | + | chr6.2:10788314-10788333 | None:intergenic | 35.0% |
| ! | TTTGATCTCTTTGACTTTCG+AGG | + | chr6.2:10788111-10788130 | None:intergenic | 35.0% |
| !! | CACCAGTATTGAAAAGGTTT+TGG | - | chr6.2:10787800-10787819 | MS.gene37192:intron | 35.0% |
| !! | CCAGTATTGAAAAGGTTTTG+GGG | - | chr6.2:10787802-10787821 | MS.gene37192:intron | 35.0% |
| !! | GAATGCTCTAAAGATCCAAA+TGG | - | chr6.2:10788332-10788351 | MS.gene37192:intron | 35.0% |
| !!! | ATTGAAAAGGTTTTGGGGTT+AGG | - | chr6.2:10787807-10787826 | MS.gene37192:intron | 35.0% |
| !!! | TTGAAAAGGTTTTGGGGTTA+GGG | - | chr6.2:10787808-10787827 | MS.gene37192:intron | 35.0% |
| AAACTCCATGAATTCTCCAG+AGG | + | chr6.2:10788447-10788466 | None:intergenic | 40.0% | |
| AACTCCATGAATTCTCCAGA+GGG | + | chr6.2:10788446-10788465 | None:intergenic | 40.0% | |
| ATACCCTTGATTGATCTTGG+TGG | - | chr6.2:10787265-10787284 | MS.gene37192:intron | 40.0% | |
| CTCAGAAACCACCTAAATAC+CGG | - | chr6.2:10788471-10788490 | MS.gene37192:CDS | 40.0% | |
| GGCTTCATCCATTAAATCCT+TGG | + | chr6.2:10788261-10788280 | None:intergenic | 40.0% | |
| TATAGGAATCAAGCTCTCGA+GGG | - | chr6.2:10788041-10788060 | MS.gene37192:intron | 40.0% | |
| TCTAGTGGTTGGACAAAAGA+AGG | + | chr6.2:10787205-10787224 | None:intergenic | 40.0% | |
| ! | CCCCAAAACCTTTTCAATAC+TGG | + | chr6.2:10787805-10787824 | None:intergenic | 40.0% |
| ! | CTGGAGAATTCATGGAGTTT+TGG | - | chr6.2:10788447-10788466 | MS.gene37192:CDS | 40.0% |
| !! | TATCTTTTCCTTTGGAGGCA+TGG | + | chr6.2:10788309-10788328 | None:intergenic | 40.0% |
| ACTAGAGTGTAGACCTGGTA+AGG | - | chr6.2:10787219-10787238 | MS.gene37192:intron | 45.0% | |
| AGTGGTTGGACAAAAGAAGG+TGG | + | chr6.2:10787202-10787221 | None:intergenic | 45.0% | |
| CGGTATTTAGGTGGTTTCTG+AGG | + | chr6.2:10788473-10788492 | None:intergenic | 45.0% | |
| GACAAAAGAAGGTGGAACTG+AGG | + | chr6.2:10787194-10787213 | None:intergenic | 45.0% | |
| GATCAACCATGGAGTTTCCA+AGG | - | chr6.2:10788241-10788260 | MS.gene37192:intron | 45.0% | |
| GTATAGGAATCAAGCTCTCG+AGG | - | chr6.2:10788040-10788059 | MS.gene37192:intron | 45.0% | |
| TTACCAGGTCTACACTCTAG+TGG | + | chr6.2:10787220-10787239 | None:intergenic | 45.0% | |
| AATTCTCCAGAGGGAGGACA+AGG | + | chr6.2:10788437-10788456 | None:intergenic | 50.0% | |
| ATTCTCCAGAGGGAGGACAA+GGG | + | chr6.2:10788436-10788455 | None:intergenic | 50.0% | |
| CAACCACTAGAGTGTAGACC+TGG | - | chr6.2:10787214-10787233 | MS.gene37192:intron | 50.0% | |
| CAGGTCTACACTCTAGTGGT+TGG | + | chr6.2:10787216-10787235 | None:intergenic | 50.0% | |
| GAAGGGTTTGTGACCTTACC+AGG | + | chr6.2:10787235-10787254 | None:intergenic | 50.0% | |
| TCCATGAATTCTCCAGAGGG+AGG | + | chr6.2:10788443-10788462 | None:intergenic | 50.0% | |
| ! | TCCTCCCTCTGGAGAATTCA+TGG | - | chr6.2:10788439-10788458 | MS.gene37192:CDS | 50.0% |
| ! | TTTCCTTTGGAGGCATGGCA+TGG | + | chr6.2:10788304-10788323 | None:intergenic | 50.0% |
| GTTCCATGCCATGCCTCCAA+AGG | - | chr6.2:10788298-10788317 | MS.gene37192:intron | 55.0% | |
| ACACACCCTTGTCCTCCCTC+TGG | - | chr6.2:10788428-10788447 | MS.gene37192:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 10787142 | 10788616 | 10787142 | ID=MS.gene37192 |
| chr6.2 | mRNA | 10787142 | 10788616 | 10787142 | ID=MS.gene37192.t1;Parent=MS.gene37192 |
| chr6.2 | exon | 10788407 | 10788616 | 10788407 | ID=MS.gene37192.t1.exon1;Parent=MS.gene37192.t1 |
| chr6.2 | CDS | 10788407 | 10788616 | 10788407 | ID=cds.MS.gene37192.t1;Parent=MS.gene37192.t1 |
| chr6.2 | exon | 10787266 | 10787519 | 10787266 | ID=MS.gene37192.t1.exon2;Parent=MS.gene37192.t1 |
| chr6.2 | CDS | 10787266 | 10787519 | 10787266 | ID=cds.MS.gene37192.t1;Parent=MS.gene37192.t1 |
| chr6.2 | exon | 10787142 | 10787148 | 10787142 | ID=MS.gene37192.t1.exon3;Parent=MS.gene37192.t1 |
| chr6.2 | CDS | 10787142 | 10787148 | 10787142 | ID=cds.MS.gene37192.t1;Parent=MS.gene37192.t1 |
| Gene Sequence |
| Protein sequence |
