Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49883.t1 | ABD33348.2 | 97.8 | 775 | 14 | 2 | 1 | 773 | 1 | 774 | 0.00E+00 | 1413.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49883.t1 | Q9FMB4 | 67.0 | 793 | 234 | 5 | 4 | 772 | 6 | 794 | 1.3e-289 | 996.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49883.t1 | Q2HSE5 | 97.8 | 775 | 14 | 2 | 1 | 773 | 1 | 774 | 0.0e+00 | 1413.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene49883 | 0.88828 | 6.79E-73 | -1.69E-46 |
| MS.gene049178 | MS.gene49883 | 0.801644 | 8.17E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene49883 | 0.841589 | 4.34E-58 | -1.69E-46 |
| MS.gene049368 | MS.gene49883 | 0.84217 | 3.05E-58 | -1.69E-46 |
| MS.gene049585 | MS.gene49883 | 0.81521 | 1.04E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene49883 | 0.807115 | 5.92E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene49883 | 0.852414 | 4.69E-61 | -1.69E-46 |
| MS.gene049821 | MS.gene49883 | 0.80193 | 7.14E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene49883 | 0.806497 | 7.99E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene49883 | 0.850448 | 1.69E-60 | -1.69E-46 |
| MS.gene050085 | MS.gene49883 | 0.810546 | 1.09E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene49883 | 0.861094 | 1.31E-63 | -1.69E-46 |
| MS.gene050646 | MS.gene49883 | 0.81371 | 2.23E-51 | -1.69E-46 |
| MS.gene050689 | MS.gene49883 | 0.835345 | 1.77E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene49883 | 0.831971 | 1.23E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene49883 | 0.84325 | 1.57E-58 | -1.69E-46 |
| MS.gene050901 | MS.gene49883 | 0.822852 | 1.90E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene49883 | 0.811739 | 6.02E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene49883 | 0.876157 | 1.74E-68 | -1.69E-46 |
| MS.gene051180 | MS.gene49883 | 0.818149 | 2.28E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene49883 | 0.827131 | 1.85E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene49883 | 0.819033 | 1.44E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene49883 | 0.802741 | 4.86E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene49883 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene051343 | MS.gene49883 | 0.830663 | 2.59E-55 | -1.69E-46 |
| MS.gene051381 | MS.gene49883 | 0.82778 | 1.29E-54 | -1.69E-46 |
| MS.gene05157 | MS.gene49883 | 0.826492 | 2.63E-54 | -1.69E-46 |
| MS.gene051642 | MS.gene49883 | 0.802222 | 6.21E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene49883 | 0.818516 | 1.88E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene49883 | 0.831116 | 2.00E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene49883 | 0.831727 | 1.42E-55 | -1.69E-46 |
| MS.gene051724 | MS.gene49883 | 0.812317 | 4.51E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene49883 | 0.812861 | 3.43E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene49883 | 0.802402 | 5.71E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene49883 | 0.81119 | 7.92E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene49883 | 0.80892 | 2.44E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene49883 | 0.801868 | 7.35E-49 | -1.69E-46 |
| MS.gene052168 | MS.gene49883 | 0.805266 | 1.45E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene49883 | -0.802705 | 4.94E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene49883 | 0.865994 | 3.94E-65 | -1.69E-46 |
| MS.gene052335 | MS.gene49883 | 0.823706 | 1.20E-53 | -1.69E-46 |
| MS.gene052397 | MS.gene49883 | 0.827078 | 1.91E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene49883 | 0.835488 | 1.63E-56 | -1.69E-46 |
| MS.gene052514 | MS.gene49883 | 0.8251 | 5.63E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene49883 | 0.855194 | 7.43E-62 | -1.69E-46 |
| MS.gene052609 | MS.gene49883 | 0.883602 | 3.90E-71 | -1.69E-46 |
| MS.gene052665 | MS.gene49883 | 0.826577 | 2.51E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene49883 | 0.812855 | 3.44E-51 | -1.69E-46 |
| MS.gene052776 | MS.gene49883 | 0.813484 | 2.50E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene49883 | 0.848084 | 7.68E-60 | -1.69E-46 |
| MS.gene053122 | MS.gene49883 | 0.800139 | 1.66E-48 | -1.69E-46 |
| MS.gene053143 | MS.gene49883 | 0.876582 | 1.25E-68 | -1.69E-46 |
| MS.gene053144 | MS.gene49883 | 0.854331 | 1.32E-61 | -1.69E-46 |
| MS.gene05315 | MS.gene49883 | 0.815901 | 7.29E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene49883 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene49883 | 0.816647 | 4.97E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene49883 | 0.851077 | 1.12E-60 | -1.69E-46 |
| MS.gene05364 | MS.gene49883 | 0.817453 | 3.27E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene49883 | 0.851197 | 1.04E-60 | -1.69E-46 |
| MS.gene05458 | MS.gene49883 | 0.81283 | 3.48E-51 | -1.69E-46 |
| MS.gene05462 | MS.gene49883 | 0.809095 | 2.24E-50 | -1.69E-46 |
| MS.gene054824 | MS.gene49883 | 0.852296 | 5.07E-61 | -1.69E-46 |
| MS.gene054943 | MS.gene49883 | 0.811387 | 7.18E-51 | -1.69E-46 |
| MS.gene055144 | MS.gene49883 | 0.82685 | 2.16E-54 | -1.69E-46 |
| MS.gene055311 | MS.gene49883 | 0.824437 | 8.08E-54 | -1.69E-46 |
| MS.gene055313 | MS.gene49883 | 0.841738 | 3.96E-58 | -1.69E-46 |
| MS.gene055314 | MS.gene49883 | 0.815929 | 7.19E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene49883 | 0.87841 | 2.87E-69 | -1.69E-46 |
| MS.gene055466 | MS.gene49883 | 0.851018 | 1.17E-60 | -1.69E-46 |
| MS.gene055467 | MS.gene49883 | 0.844868 | 5.79E-59 | -1.69E-46 |
| MS.gene055468 | MS.gene49883 | 0.862882 | 3.70E-64 | -1.69E-46 |
| MS.gene055469 | MS.gene49883 | 0.894632 | 2.06E-75 | -1.69E-46 |
| MS.gene055513 | MS.gene49883 | 0.867009 | 1.88E-65 | -1.69E-46 |
| MS.gene055537 | MS.gene49883 | 0.834462 | 2.96E-56 | -1.69E-46 |
| MS.gene055580 | MS.gene49883 | -0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene49883 | 0.812349 | 4.43E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene49883 | 0.818826 | 1.60E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene49883 | 0.815405 | 9.40E-52 | -1.69E-46 |
| MS.gene056005 | MS.gene49883 | 0.820114 | 8.14E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene49883 | -0.815065 | 1.12E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene49883 | 0.824424 | 8.13E-54 | -1.69E-46 |
| MS.gene056181 | MS.gene49883 | 0.840375 | 9.03E-58 | -1.69E-46 |
| MS.gene056308 | MS.gene49883 | 0.913211 | 8.00E-84 | -1.69E-46 |
| MS.gene056390 | MS.gene49883 | 0.823693 | 1.21E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene49883 | 0.862088 | 6.49E-64 | -1.69E-46 |
| MS.gene056553 | MS.gene49883 | 0.802701 | 4.95E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene49883 | 0.80808 | 3.69E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene49883 | 0.838168 | 3.37E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene49883 | 0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene49883 | 0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene057294 | MS.gene49883 | 0.820465 | 6.76E-53 | -1.69E-46 |
| MS.gene057360 | MS.gene49883 | 0.820434 | 6.87E-53 | -1.69E-46 |
| MS.gene057446 | MS.gene49883 | 0.853573 | 2.19E-61 | -1.69E-46 |
| MS.gene057915 | MS.gene49883 | 0.832372 | 9.81E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene49883 | 0.826682 | 2.37E-54 | -1.69E-46 |
| MS.gene058087 | MS.gene49883 | 0.837118 | 6.28E-57 | -1.69E-46 |
| MS.gene058292 | MS.gene49883 | 0.812918 | 3.33E-51 | -1.69E-46 |
| MS.gene058330 | MS.gene49883 | 0.825976 | 3.49E-54 | -1.69E-46 |
| MS.gene058339 | MS.gene49883 | 0.818486 | 1.91E-52 | -1.69E-46 |
| MS.gene058360 | MS.gene49883 | 0.811756 | 5.97E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene49883 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene49883 | 0.846161 | 2.58E-59 | -1.69E-46 |
| MS.gene058639 | MS.gene49883 | 0.852 | 6.15E-61 | -1.69E-46 |
| MS.gene058647 | MS.gene49883 | 0.82858 | 8.31E-55 | -1.69E-46 |
| MS.gene058649 | MS.gene49883 | 0.833545 | 5.02E-56 | -1.69E-46 |
| MS.gene058668 | MS.gene49883 | 0.819891 | 9.15E-53 | -1.69E-46 |
| MS.gene05870 | MS.gene49883 | 0.801548 | 8.55E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene49883 | 0.854978 | 8.58E-62 | -1.69E-46 |
| MS.gene058919 | MS.gene49883 | 0.812909 | 3.34E-51 | -1.69E-46 |
| MS.gene05897 | MS.gene49883 | 0.804115 | 2.52E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene49883 | 0.804905 | 1.73E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene49883 | 0.811532 | 6.68E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene49883 | 0.848172 | 7.26E-60 | -1.69E-46 |
| MS.gene059227 | MS.gene49883 | 0.801697 | 7.97E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene49883 | 0.841669 | 4.13E-58 | -1.69E-46 |
| MS.gene059570 | MS.gene49883 | 0.836034 | 1.19E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene49883 | 0.814181 | 1.76E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene49883 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene49883 | 0.851447 | 8.83E-61 | -1.69E-46 |
| MS.gene059778 | MS.gene49883 | 0.815705 | 8.06E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene49883 | 0.824366 | 8.39E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene49883 | 0.826906 | 2.10E-54 | -1.69E-46 |
| MS.gene060296 | MS.gene49883 | 0.812774 | 3.58E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene49883 | 0.801105 | 1.05E-48 | -1.69E-46 |
| MS.gene060587 | MS.gene49883 | 0.82011 | 8.16E-53 | -1.69E-46 |
| MS.gene060603 | MS.gene49883 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene49883 | 0.824814 | 6.58E-54 | -1.69E-46 |
| MS.gene060933 | MS.gene49883 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene49883 | 0.884132 | 2.49E-71 | -1.69E-46 |
| MS.gene061100 | MS.gene49883 | 0.869437 | 3.10E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49883.t1 | MTR_7g016900 | 97.806 | 775 | 14 | 2 | 1 | 773 | 1 | 774 | 0.0 | 1554 |
| MS.gene49883.t1 | MTR_7g008870 | 83.562 | 73 | 8 | 1 | 701 | 773 | 23 | 91 | 1.64e-34 | 127 |
| MS.gene49883.t1 | MTR_7g051850 | 86.441 | 59 | 8 | 0 | 686 | 744 | 8 | 66 | 8.40e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49883.t1 | AT5G38880 | 70.113 | 793 | 209 | 6 | 4 | 772 | 6 | 794 | 0.0 | 1118 |
Find 193 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTACAGTATCCACTTTA+TGG | 0.131855 | 7.4:-83245518 | MS.gene49883:CDS |
| TATAGTAACAGAGACGTTTA+TGG | 0.205757 | 7.4:+83246378 | None:intergenic |
| TGCAGGATGCTGCTTCATTT+TGG | 0.252455 | 7.4:-83243402 | MS.gene49883:intron |
| CAGTAATTGCCTGAAGTAAT+AGG | 0.266699 | 7.4:+83246006 | None:intergenic |
| AAGAGAAGTTGCTGGTTTAA+AGG | 0.281025 | 7.4:-83243922 | MS.gene49883:CDS |
| GAAGAGAGAAGGGGAGGAAG+TGG | 0.281721 | 7.4:-83248471 | MS.gene49883:CDS |
| TTGATGAACGGGCGAATTAC+AGG | 0.306303 | 7.4:-83248313 | MS.gene49883:intron |
| GCACAAGATCCCGTCTAATA+TGG | 0.306533 | 7.4:+83241670 | None:intergenic |
| TGGAAGCTTGCAAATATGTT+TGG | 0.312539 | 7.4:-83241307 | MS.gene49883:CDS |
| AGCTGTTTATTCTACTGTTA+AGG | 0.323612 | 7.4:-83246270 | MS.gene49883:CDS |
| CATGTATTCAGCTAGATGTT+TGG | 0.326608 | 7.4:-83243953 | MS.gene49883:intron |
| GGAAGCTTGCAAATATGTTT+GGG | 0.327032 | 7.4:-83241306 | MS.gene49883:CDS |
| GGAAGTGGAGGTTGCGTTGA+TGG | 0.329516 | 7.4:-83248456 | MS.gene49883:CDS |
| ATGTATTCAGCTAGATGTTT+GGG | 0.331353 | 7.4:-83243952 | MS.gene49883:intron |
| CTCCGGCGCCGGCGGCGTAT+TGG | 0.335674 | 7.4:+83248663 | None:intergenic |
| CACGGTGAAGGGGATGGTGG+TGG | 0.347298 | 7.4:-83248506 | MS.gene49883:CDS |
| CTTTATGGAAATGGAAAACT+TGG | 0.352170 | 7.4:-83245503 | MS.gene49883:CDS |
| CCTCGTAACGCGTGCGAAAT+CGG | 0.353135 | 7.4:-83248567 | MS.gene49883:CDS |
| CAGTATCCACTTTATGGAAA+TGG | 0.356840 | 7.4:-83245512 | MS.gene49883:CDS |
| TGGAAGTCTTAGACAACTTC+AGG | 0.363351 | 7.4:-83245206 | MS.gene49883:intron |
| TTTAAGAAGTGCGGTGTATA+TGG | 0.370811 | 7.4:+83243764 | None:intergenic |
| AGTAATTGCCTGAAGTAATA+GGG | 0.377154 | 7.4:+83246007 | None:intergenic |
| CGGCATCGACGGTTGTCGAC+TGG | 0.377291 | 7.4:-83241022 | MS.gene49883:CDS |
| TTTGAATGCTCAGCAAAGTT+TGG | 0.377690 | 7.4:-83241327 | MS.gene49883:CDS |
| CGAATGGCTTCACAAAGAAA+TGG | 0.379940 | 7.4:-83248702 | MS.gene49883:CDS |
| GGAAGAAGGAGAAGAGAGAA+GGG | 0.385063 | 7.4:-83248481 | MS.gene49883:CDS |
| TTCTTAATGCGCAGGCTTGG+AGG | 0.387723 | 7.4:-83241802 | MS.gene49883:intron |
| GCTGTTTATTCTACTGTTAA+GGG | 0.389280 | 7.4:-83246269 | MS.gene49883:CDS |
| GATGTTACTTCTCGTTCAAT+TGG | 0.390994 | 7.4:-83245247 | MS.gene49883:CDS |
| TCAAGCAGAAGCAGCGAAGC+TGG | 0.397262 | 7.4:-83246099 | MS.gene49883:CDS |
| TCATGCCTACTTTGTTCAAC+AGG | 0.399440 | 7.4:-83241625 | MS.gene49883:CDS |
| GGAGAGGGATGCGGTGAAGA+AGG | 0.403566 | 7.4:-83248435 | MS.gene49883:CDS |
| GAAGAGGATGCTTGATGAAC+GGG | 0.405836 | 7.4:-83248324 | MS.gene49883:CDS |
| AGAAGGAGGTTGAGAGGTTG+AGG | 0.408148 | 7.4:-83248418 | MS.gene49883:CDS |
| CGTGGATTCTTCCGTTGAAA+TGG | 0.408715 | 7.4:-83246324 | MS.gene49883:CDS |
| GAGTCCTCCCCTATTACTTC+AGG | 0.412492 | 7.4:-83246015 | MS.gene49883:CDS |
| GTAATAGGGGAGGACTCTTT+AGG | 0.420923 | 7.4:+83246021 | None:intergenic |
| TGATGAGTGGTGGGAGCAAC+CGG | 0.422273 | 7.4:-83241042 | MS.gene49883:CDS |
| CTGCCGTGGGAACATGATTC+CGG | 0.423922 | 7.4:-83248600 | MS.gene49883:CDS |
| AGCATGTAGAGGCTATTATC+TGG | 0.424373 | 7.4:+83243250 | None:intergenic |
| GGCTTGGAGGGTTCAGATGC+TGG | 0.426927 | 7.4:-83241789 | MS.gene49883:CDS |
| CAGGCACTGCTTGAGGCCAT+CGG | 0.427432 | 7.4:-83242328 | MS.gene49883:CDS |
| ATCGGGTCCAGTGGATCATC+TGG | 0.429603 | 7.4:-83242310 | MS.gene49883:CDS |
| ATGGATGTTTCCTCTTCTGA+TGG | 0.430234 | 7.4:-83245548 | MS.gene49883:CDS |
| GCTGAGACCCGACATATTGA+TGG | 0.433205 | 7.4:+83242208 | None:intergenic |
| GGCCAATACGCCGCCGGCGC+CGG | 0.438971 | 7.4:-83248665 | MS.gene49883:CDS |
| CGCACTTCTTAAAGCAAATA+CGG | 0.440398 | 7.4:-83243754 | MS.gene49883:intron |
| GGATGGTGGTGGGAGGAAGA+AGG | 0.444216 | 7.4:-83248495 | MS.gene49883:CDS |
| GAATGTGAGGAGGAATATTA+CGG | 0.449349 | 7.4:-83248531 | MS.gene49883:CDS |
| ATATGAAAATAACATAGTTA+TGG | 0.453264 | 7.4:-83245567 | MS.gene49883:CDS |
| TGGTTCAGAAGCTAGTGTTT+TGG | 0.454086 | 7.4:-83241721 | MS.gene49883:CDS |
| AGGAAGAAGGAGAAGAGAGA+AGG | 0.454517 | 7.4:-83248482 | MS.gene49883:CDS |
| AGCTTCGCTGCTTCTGCTTG+AGG | 0.455594 | 7.4:+83246101 | None:intergenic |
| TGATGGGCAGATTCCGGATG+AGG | 0.464339 | 7.4:-83246066 | MS.gene49883:CDS |
| CTTGGGGCTGATGTGCCTCC+AGG | 0.466724 | 7.4:-83245485 | MS.gene49883:CDS |
| GGGAAGAAGCGGAGAGGAAG+AGG | 0.466854 | 7.4:-83248340 | MS.gene49883:CDS |
| CATGCTTCCTTCTTCACCAC+AGG | 0.472095 | 7.4:-83243233 | MS.gene49883:intron |
| TTCTGCAGCTTGATGAGTGG+TGG | 0.472825 | 7.4:-83241052 | MS.gene49883:intron |
| ATAACTGTTCTAACCTCATC+CGG | 0.473562 | 7.4:+83246053 | None:intergenic |
| GAATAAAGACCTGTCTTTCA+AGG | 0.474678 | 7.4:+83245444 | None:intergenic |
| GACAGCAAGAGCCGGTGCTC+GGG | 0.476775 | 7.4:-83242245 | MS.gene49883:CDS |
| AAAACACCAGTCTTGAGTTC+AGG | 0.477991 | 7.4:+83241347 | None:intergenic |
| GTCGACTGGGTGACAGTGGA+TGG | 0.478572 | 7.4:-83241008 | MS.gene49883:CDS |
| AAATCAGCTCCTTGAAAGAC+AGG | 0.479838 | 7.4:-83245453 | MS.gene49883:intron |
| TGACAGCAAGAGCCGGTGCT+CGG | 0.480202 | 7.4:-83242246 | MS.gene49883:CDS |
| GAAGGAGAAGAGAGAAGGGG+AGG | 0.480900 | 7.4:-83248477 | MS.gene49883:CDS |
| TTGCGAATCGATTCGACTGA+CGG | 0.481305 | 7.4:+83248626 | None:intergenic |
| AGGCACTGCTTGAGGCCATC+GGG | 0.484747 | 7.4:-83242327 | MS.gene49883:CDS |
| CAAGCAGAAGCAGCGAAGCT+GGG | 0.485794 | 7.4:-83246098 | MS.gene49883:CDS |
| ATCTTCGGCTTCTTTCCTCT+CGG | 0.489665 | 7.4:+83243848 | None:intergenic |
| GCAAAGGAAAGAGAAGTTGC+TGG | 0.490620 | 7.4:-83243930 | MS.gene49883:CDS |
| GTGAAGGGGATGGTGGTGGG+AGG | 0.491173 | 7.4:-83248502 | MS.gene49883:CDS |
| GAGAGAAGGGGAGGAAGTGG+AGG | 0.492293 | 7.4:-83248468 | MS.gene49883:CDS |
| GCAAGGGATGCTCAAAGATC+AGG | 0.494346 | 7.4:-83246347 | MS.gene49883:CDS |
| GCGTGCGAAATCGGAGAAAA+CGG | 0.495022 | 7.4:-83248558 | MS.gene49883:CDS |
| GCTTCTAACATGTTATGATC+AGG | 0.495135 | 7.4:-83240949 | MS.gene49883:CDS |
| TGGATGTTTCCTCTTCTGAT+GGG | 0.496110 | 7.4:-83245547 | MS.gene49883:CDS |
| TGCTGGTCTAGCATCCGTAC+TGG | 0.496331 | 7.4:-83241772 | MS.gene49883:CDS |
| GGCAATTCCATCAATATGTC+GGG | 0.498007 | 7.4:-83242215 | MS.gene49883:CDS |
| ACGCCACTTCCTTCGTAAGC+AGG | 0.500417 | 7.4:+83246134 | None:intergenic |
| CAATACGCCGCCGGCGCCGG+AGG | 0.501014 | 7.4:-83248662 | MS.gene49883:CDS |
| GGCATCGACGGTTGTCGACT+GGG | 0.501409 | 7.4:-83241021 | MS.gene49883:CDS |
| GAATGGCTTCACAAAGAAAT+GGG | 0.502140 | 7.4:-83248701 | MS.gene49883:CDS |
| GCTGCACTTCAGTATGCTGC+TGG | 0.502447 | 7.4:-83242187 | MS.gene49883:CDS |
| CGAGAATGCTAGAGGTTTCG+AGG | 0.506029 | 7.4:-83248361 | MS.gene49883:CDS |
| TTCATCACATTGGCGATCAT+AGG | 0.508126 | 7.4:+83246424 | None:intergenic |
| TTATAAACCTGTGGTGAAGA+AGG | 0.508261 | 7.4:+83243226 | None:intergenic |
| TTAATCTTGTCCATATTAGA+CGG | 0.508890 | 7.4:-83241680 | MS.gene49883:CDS |
| TCGAGTATCGCTTCCGGTGA+CGG | 0.509073 | 7.4:+83248722 | None:intergenic |
| TGTTGTGAGGAGACAGAGGA+AGG | 0.512237 | 7.4:-83248393 | MS.gene49883:CDS |
| ATATTACGGTTCACGGTGAA+GGG | 0.512455 | 7.4:-83248517 | MS.gene49883:CDS |
| CAGGCATAAGCAAGTGATGT+TGG | 0.512719 | 7.4:-83246450 | MS.gene49883:CDS |
| TTGCAAATATGTTTGGGGAT+TGG | 0.513243 | 7.4:-83241300 | MS.gene49883:intron |
| TTTCCTGCTTACGAAGGAAG+TGG | 0.514296 | 7.4:-83246137 | MS.gene49883:CDS |
| TCTGCAGCTTGATGAGTGGT+GGG | 0.516666 | 7.4:-83241051 | MS.gene49883:intron |
| AGCCATTCGAGTATCGCTTC+CGG | 0.518680 | 7.4:+83248716 | None:intergenic |
| AATATTACGGTTCACGGTGA+AGG | 0.519453 | 7.4:-83248518 | MS.gene49883:CDS |
| TGCCGACGGATCCCGAGCAC+CGG | 0.519503 | 7.4:+83242234 | None:intergenic |
| GGAATGTTGTGAGGAGACAG+AGG | 0.522586 | 7.4:-83248397 | MS.gene49883:CDS |
| ACAATCTTCATCGCCGTCAC+CGG | 0.528251 | 7.4:-83248735 | MS.gene49883:CDS |
| AGCATCCGTACTGGAGTCCC+TGG | 0.531380 | 7.4:-83241763 | MS.gene49883:CDS |
| ATAGTCCTGTTGAACAAAGT+AGG | 0.534887 | 7.4:+83241620 | None:intergenic |
| AGCCGGTGCTCGGGATCCGT+CGG | 0.535214 | 7.4:-83242236 | MS.gene49883:CDS |
| CCGATTTCGCACGCGTTACG+AGG | 0.536395 | 7.4:+83248567 | None:intergenic |
| GTCCAGTGGATCATCTGGAC+AGG | 0.537413 | 7.4:-83242305 | MS.gene49883:CDS |
| TGGAGGTTGCGTTGATGGAG+AGG | 0.537697 | 7.4:-83248451 | MS.gene49883:CDS |
| TCTTAATGCGCAGGCTTGGA+GGG | 0.537896 | 7.4:-83241801 | MS.gene49883:intron |
| TAATCTTGTCCATATTAGAC+GGG | 0.538291 | 7.4:-83241679 | MS.gene49883:CDS |
| TGAATCTCTTGTAGCTTACA+TGG | 0.539346 | 7.4:-83246180 | MS.gene49883:CDS |
| AAAACTATTTACCATTTCAA+CGG | 0.539456 | 7.4:+83246313 | None:intergenic |
| CGGTGAAGAAGGAGGTTGAG+AGG | 0.539715 | 7.4:-83248424 | MS.gene49883:CDS |
| CGAAATCGGAGAAAACGGTT+AGG | 0.540404 | 7.4:-83248553 | MS.gene49883:CDS |
| GCGTTGTATTTCAGACATCA+AGG | 0.541137 | 7.4:+83243887 | None:intergenic |
| GAAGAAGGAGAAGAGAGAAG+GGG | 0.541221 | 7.4:-83248480 | MS.gene49883:CDS |
| GTCAGCAACCATCGACTGCA+AGG | 0.542373 | 7.4:-83243378 | MS.gene49883:CDS |
| CAGTCGACAACCGTCGATGC+CGG | 0.544298 | 7.4:+83241023 | None:intergenic |
| TTCTCGAAGCTTCATCACAT+TGG | 0.544752 | 7.4:+83246414 | None:intergenic |
| GTTACTATATAAATCAAGCA+AGG | 0.546325 | 7.4:-83246364 | MS.gene49883:CDS |
| AGGAGGAATATTACGGTTCA+CGG | 0.547542 | 7.4:-83248524 | MS.gene49883:CDS |
| GAGGGATGCGGTGAAGAAGG+AGG | 0.548565 | 7.4:-83248432 | MS.gene49883:CDS |
| ACGGTGAAGGGGATGGTGGT+GGG | 0.550521 | 7.4:-83248505 | MS.gene49883:CDS |
| TCAGCTAGATGTTTGGGCAA+AGG | 0.550594 | 7.4:-83243946 | MS.gene49883:intron |
| GTGGGAGCAACCGGCATCGA+CGG | 0.554649 | 7.4:-83241033 | MS.gene49883:CDS |
| GACGTTTCAAGCAAAACTCC+AGG | 0.555173 | 7.4:+83241745 | None:intergenic |
| TTCTTCTGCAGCTTGATGAG+TGG | 0.555882 | 7.4:-83241055 | MS.gene49883:intron |
| TAAACAATGCTGCAGAAGCA+AGG | 0.557173 | 7.4:-83245312 | MS.gene49883:CDS |
| TCTGGTTCAGGCACTGCTTG+AGG | 0.561058 | 7.4:-83242335 | MS.gene49883:intron |
| TTCCTGTCCAGATGATCCAC+TGG | 0.561115 | 7.4:+83242303 | None:intergenic |
| TTTATGGAAATGGAAAACTT+GGG | 0.564742 | 7.4:-83245502 | MS.gene49883:CDS |
| CGGCAATTCCATCAATATGT+CGG | 0.564930 | 7.4:-83242216 | MS.gene49883:CDS |
| GCATACTCCCTTGCAGTCGA+TGG | 0.568781 | 7.4:+83243370 | None:intergenic |
| GGAGCCACGTCTCAAAATGT+TGG | 0.569343 | 7.4:-83245226 | MS.gene49883:CDS |
| TCAACAACAGCAGAACATGC+TGG | 0.570268 | 7.4:+83243331 | None:intergenic |
| GAGCTGATGCAGAGATCTTG+AGG | 0.571777 | 7.4:-83245926 | MS.gene49883:intron |
| AAACTTATGAAACGTCTGCA+TGG | 0.572224 | 7.4:-83245277 | MS.gene49883:CDS |
| ACGGTTCACGGTGAAGGGGA+TGG | 0.572577 | 7.4:-83248512 | MS.gene49883:CDS |
| GAGGGAAAAGAATATTAGAA+AGG | 0.573113 | 7.4:-83246207 | MS.gene49883:CDS |
| CCACTCGGCCAATACGCCGC+CGG | 0.580636 | 7.4:-83248671 | MS.gene49883:CDS |
| CTTGAGGCCATCGGGTCCAG+TGG | 0.580795 | 7.4:-83242319 | MS.gene49883:CDS |
| CGTATTTGCTTTAAGAAGTG+CGG | 0.581014 | 7.4:+83243755 | None:intergenic |
| TCGATTCGCAAAATCTGCCG+TGG | 0.582821 | 7.4:-83248614 | MS.gene49883:CDS |
| AAACTCCAGGGACTCCAGTA+CGG | 0.583455 | 7.4:+83241758 | None:intergenic |
| TTGTTCAACAGGACTATGAA+AGG | 0.583997 | 7.4:-83241614 | MS.gene49883:intron |
| TGGTTGCCTGAACTCAAGAC+TGG | 0.584766 | 7.4:-83241353 | MS.gene49883:CDS |
| GGAAGAGGATGCTTGATGAA+CGG | 0.585097 | 7.4:-83248325 | MS.gene49883:CDS |
| AAACAATGCTGCAGAAGCAA+GGG | 0.586745 | 7.4:-83245311 | MS.gene49883:CDS |
| GTGGGAACATGATTCCGGTA+TGG | 0.586849 | 7.4:-83248595 | MS.gene49883:CDS |
| AGAACAAGAAAGAGCTGTCA+CGG | 0.587048 | 7.4:-83241381 | MS.gene49883:CDS |
| AGGAGAGCTCCCATCAGAAG+AGG | 0.587302 | 7.4:+83245538 | None:intergenic |
| GAGAATGCTAGAGGTTTCGA+GGG | 0.588493 | 7.4:-83248360 | MS.gene49883:CDS |
| CCATAAAGTGGATACTGTAG+AGG | 0.590208 | 7.4:+83245518 | None:intergenic |
| GAAGCTTGCAAATATGTTTG+GGG | 0.591476 | 7.4:-83241305 | MS.gene49883:CDS |
| AGAGGTTTCGAGGGAAGAAG+CGG | 0.591929 | 7.4:-83248351 | MS.gene49883:CDS |
| TGCGTTGATGGAGAGGGATG+CGG | 0.592147 | 7.4:-83248444 | MS.gene49883:CDS |
| AAGCAGAAGCAGCGAAGCTG+GGG | 0.592988 | 7.4:-83246097 | MS.gene49883:CDS |
| GCATAAGCAAGTGATGTTGG+AGG | 0.594477 | 7.4:-83246447 | MS.gene49883:CDS |
| CACCGGAAGCGATACTCGAA+TGG | 0.595650 | 7.4:-83248718 | MS.gene49883:CDS |
| TGAGACTTCAAATAGTGCAA+AGG | 0.605516 | 7.4:-83243311 | MS.gene49883:CDS |
| TTACTATATAAATCAAGCAA+GGG | 0.605937 | 7.4:-83246363 | MS.gene49883:CDS |
| GGAGGTTGCGTTGATGGAGA+GGG | 0.605995 | 7.4:-83248450 | MS.gene49883:CDS |
| AGATGATCCACTGGACCCGA+TGG | 0.607871 | 7.4:+83242312 | None:intergenic |
| TTATGGAAATGGAAAACTTG+GGG | 0.612636 | 7.4:-83245501 | MS.gene49883:CDS |
| TCGACTGGGTGACAGTGGAT+GGG | 0.613672 | 7.4:-83241007 | MS.gene49883:CDS |
| GTTCACGGTGAAGGGGATGG+TGG | 0.622464 | 7.4:-83248509 | MS.gene49883:CDS |
| TTTGAAAGCGAGAATGCTAG+AGG | 0.622507 | 7.4:-83248369 | MS.gene49883:CDS |
| GGATGCTCAAAGATCAGGCG+TGG | 0.622609 | 7.4:-83246342 | MS.gene49883:CDS |
| GTAATTGCCTGAAGTAATAG+GGG | 0.623240 | 7.4:+83246008 | None:intergenic |
| AGAGGTTGAGGAATGTTGTG+AGG | 0.624388 | 7.4:-83248406 | MS.gene49883:CDS |
| CCGGCGGCGTATTGGCCGAG+TGG | 0.630885 | 7.4:+83248671 | None:intergenic |
| GCACTTCAGTATGCTGCTGG+TGG | 0.632432 | 7.4:-83242184 | MS.gene49883:intron |
| CATATTGATGGAATTGCCGA+CGG | 0.639784 | 7.4:+83242220 | None:intergenic |
| TCAGCAACCATCGACTGCAA+GGG | 0.640424 | 7.4:-83243377 | MS.gene49883:CDS |
| GTGAAGAAGGAAGCATGTAG+AGG | 0.641857 | 7.4:+83243239 | None:intergenic |
| ATACCGGAATCATGTTCCCA+CGG | 0.646015 | 7.4:+83248597 | None:intergenic |
| TATTACGGTTCACGGTGAAG+GGG | 0.647653 | 7.4:-83248516 | MS.gene49883:CDS |
| CGATTCGCAAAATCTGCCGT+GGG | 0.647934 | 7.4:-83248613 | MS.gene49883:CDS |
| AGACGGGATCTTGTGCAAAG+TGG | 0.651848 | 7.4:-83241663 | MS.gene49883:CDS |
| AGAAAACGGTTAGGAATGTG+AGG | 0.653386 | 7.4:-83248544 | MS.gene49883:CDS |
| GAAATGGGATACAGACCACT+CGG | 0.655763 | 7.4:-83248686 | MS.gene49883:CDS |
| TTTCGAGGGAAGAAGCGGAG+AGG | 0.668597 | 7.4:-83248346 | MS.gene49883:CDS |
| TGCAAATGCAGAAATAAGTG+CGG | 0.669100 | 7.4:-83242275 | MS.gene49883:CDS |
| GGTTGTCGACTGGGTGACAG+TGG | 0.670105 | 7.4:-83241012 | MS.gene49883:CDS |
| ATTGCCTGAAGTAATAGGGG+AGG | 0.671022 | 7.4:+83246011 | None:intergenic |
| AAACGGTTAGGAATGTGAGG+AGG | 0.672158 | 7.4:-83248541 | MS.gene49883:CDS |
| ACGTTTCAAGCAAAACTCCA+GGG | 0.675911 | 7.4:+83241746 | None:intergenic |
| GTTACGAGGAAATTCCATAC+CGG | 0.676098 | 7.4:+83248581 | None:intergenic |
| GGGGCTGATGTGCCTCCAGG+AGG | 0.680711 | 7.4:-83245482 | MS.gene49883:CDS |
| AAAGTAGGCATGATTCAACA+AGG | 0.689759 | 7.4:+83241635 | None:intergenic |
| CTTATGAAACGTCTGCATGG+AGG | 0.715108 | 7.4:-83245274 | MS.gene49883:CDS |
| AATTGAACGAGAAGTAACAT+CGG | 0.724131 | 7.4:+83245249 | None:intergenic |
| TGAATAAGTTATGTGCCGAG+AGG | 0.730094 | 7.4:-83243863 | MS.gene49883:CDS |
| CATTGTCATTGAAACCACGA+GGG | 0.732985 | 7.4:-83246225 | MS.gene49883:CDS |
| TCATTGTCATTGAAACCACG+AGG | 0.733906 | 7.4:-83246226 | MS.gene49883:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 83240935 | 83248762 | 83240935 | ID=MS.gene49883 |
| chr7.4 | mRNA | 83240935 | 83248762 | 83240935 | ID=MS.gene49883.t1;Parent=MS.gene49883 |
| chr7.4 | exon | 83248314 | 83248762 | 83248314 | ID=MS.gene49883.t1.exon1;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83248314 | 83248762 | 83248314 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83245927 | 83246469 | 83245927 | ID=MS.gene49883.t1.exon2;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83245927 | 83246469 | 83245927 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83245454 | 83245595 | 83245454 | ID=MS.gene49883.t1.exon3;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83245454 | 83245595 | 83245454 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83245207 | 83245374 | 83245207 | ID=MS.gene49883.t1.exon4;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83245207 | 83245374 | 83245207 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83243755 | 83243964 | 83243755 | ID=MS.gene49883.t1.exon5;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83243755 | 83243964 | 83243755 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83243234 | 83243419 | 83243234 | ID=MS.gene49883.t1.exon6;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83243234 | 83243419 | 83243234 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83242185 | 83242347 | 83242185 | ID=MS.gene49883.t1.exon7;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83242185 | 83242347 | 83242185 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83241615 | 83241810 | 83241615 | ID=MS.gene49883.t1.exon8;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83241615 | 83241810 | 83241615 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83241301 | 83241433 | 83241301 | ID=MS.gene49883.t1.exon9;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83241301 | 83241433 | 83241301 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| chr7.4 | exon | 83240935 | 83241066 | 83240935 | ID=MS.gene49883.t1.exon10;Parent=MS.gene49883.t1 |
| chr7.4 | CDS | 83240935 | 83241066 | 83240935 | ID=cds.MS.gene49883.t1;Parent=MS.gene49883.t1 |
| Gene Sequence |
| Protein sequence |
