AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053026

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053026.t1 MTR_6g005380 90.952 210 19 0 1 210 1 210 2.33e-140 390
MS.gene053026.t1 MTR_6g005330 73.558 208 54 1 1 208 1 207 8.36e-104 298
MS.gene053026.t1 MTR_6g005340 73.077 208 55 1 1 208 1 207 1.38e-103 298
MS.gene053026.t1 MTR_6g005310 72.596 208 56 1 1 208 1 207 8.52e-103 296
MS.gene053026.t1 MTR_6g005360 73.077 208 55 1 1 208 1 207 1.36e-102 295
MS.gene053026.t1 MTR_6g005350 73.077 208 54 2 1 208 1 206 3.65e-102 294
MS.gene053026.t1 MTR_1g079490 65.686 204 68 2 7 208 6 209 6.63e-90 263
MS.gene053026.t1 MTR_4g017040 61.538 208 80 0 1 208 1 208 1.76e-86 254
MS.gene053026.t1 MTR_4g017050 63.054 203 74 1 7 208 6 208 2.85e-86 254
MS.gene053026.t1 MTR_5g046410 63.054 203 74 1 7 208 6 208 2.88e-86 254
MS.gene053026.t1 MTR_5g046430 63.054 203 74 1 7 208 6 208 2.88e-86 254
MS.gene053026.t1 MTR_4g017030 63.054 203 74 1 7 208 6 208 2.88e-86 254
MS.gene053026.t1 MTR_2g019250 63.054 203 74 1 7 208 6 208 3.83e-86 254
MS.gene053026.t1 MTR_1g023770 54.167 192 77 3 19 208 19 201 2.15e-63 196
MS.gene053026.t1 MTR_2g031270 57.609 184 70 4 26 207 27 204 2.28e-63 196
MS.gene053026.t1 MTR_2g030855 55.497 191 77 4 19 207 19 203 3.46e-63 195
MS.gene053026.t1 MTR_2g030895 54.118 170 74 3 41 207 1 169 9.68e-55 172
MS.gene053026.t1 MTR_1g085500 48.958 192 91 3 16 205 17 203 1.79e-54 173
MS.gene053026.t1 MTR_2g030865 54.118 170 74 3 41 207 1 169 2.86e-53 169
MS.gene053026.t1 MTR_1g085140 47.090 189 93 3 18 204 20 203 2.75e-49 160
MS.gene053026.t1 MTR_7g111240 49.462 186 87 3 21 204 19 199 4.81e-49 159
MS.gene053026.t1 MTR_7g111240 48.925 186 85 4 21 204 19 196 6.79e-46 151
MS.gene053026.t1 MTR_2g031300 48.503 167 63 3 41 205 1 146 2.59e-43 142
MS.gene053026.t1 MTR_5g036570 44.974 189 94 5 21 205 26 208 2.54e-38 132
MS.gene053026.t1 MTR_8g020750 44.086 186 91 5 1 184 3 177 3.10e-37 129
MS.gene053026.t1 MTR_1g112200 39.153 189 103 4 19 206 20 197 1.34e-32 117
MS.gene053026.t1 MTR_2g041550 44.156 154 79 3 28 179 23 171 4.70e-32 115
MS.gene053026.t1 MTR_1g060120 36.538 208 120 5 2 202 5 207 1.05e-31 115
MS.gene053026.t1 MTR_8g020630 41.718 163 88 3 17 178 13 169 4.17e-31 113
MS.gene053026.t1 MTR_8g020590 42.949 156 82 3 26 179 19 169 5.20e-31 113
MS.gene053026.t1 MTR_8g020770 44.379 169 83 4 11 176 10 170 2.44e-30 111
MS.gene053026.t1 MTR_2g036120 39.378 193 102 6 17 205 13 194 4.46e-29 108
MS.gene053026.t1 MTR_8g020650 42.208 154 82 3 26 178 22 169 7.20e-29 107
MS.gene053026.t1 MTR_8g007300 38.587 184 101 3 26 204 30 206 1.00e-28 107
MS.gene053026.t1 MTR_3g019710 38.308 201 110 6 6 205 7 194 3.81e-28 105
MS.gene053026.t1 MTR_2g041570 40.132 152 84 3 28 177 23 169 8.49e-28 104
MS.gene053026.t1 MTR_2g044040 40.741 162 89 3 17 177 13 168 8.93e-28 104
MS.gene053026.t1 MTR_2g041580 40.132 152 84 3 28 177 23 169 9.14e-28 104
MS.gene053026.t1 MTR_3g019650 37.745 204 106 7 6 205 7 193 1.00e-27 104
MS.gene053026.t1 MTR_3g019680 36.893 206 109 7 6 207 7 195 7.65e-27 102
MS.gene053026.t1 MTR_2g045100 39.766 171 96 3 8 177 4 168 9.59e-27 102
MS.gene053026.t1 MTR_8g020670 37.989 179 100 4 1 178 1 169 9.59e-27 102
MS.gene053026.t1 MTR_0284s0010 38.690 168 95 4 17 183 13 173 1.57e-25 99.0
MS.gene053026.t1 MTR_8g020760 39.773 176 92 5 4 177 7 170 1.99e-25 98.6
MS.gene053026.t1 MTR_3g096330 37.097 186 104 4 1 179 553 732 4.35e-25 102
MS.gene053026.t1 MTR_2g019780 35.450 189 112 5 1 188 3 182 2.81e-24 95.5
MS.gene053026.t1 MTR_5g031460 35.976 164 98 3 17 179 13 170 4.97e-24 95.1
MS.gene053026.t1 MTR_4g010340 39.888 178 92 6 1 177 1 164 5.85e-24 94.7
MS.gene053026.t1 MTR_7g011340 39.623 159 88 4 26 183 22 173 3.37e-23 92.8
MS.gene053026.t1 MTR_8g020763 42.336 137 73 2 43 177 17 149 5.87e-23 91.7
MS.gene053026.t1 MTR_4g052770 42.188 128 68 3 79 205 72 194 6.40e-23 92.0
MS.gene053026.t1 MTR_4g052780 41.406 128 69 3 79 205 72 194 8.24e-23 91.7
MS.gene053026.t1 MTR_3g073170 40.397 151 81 4 28 177 27 169 2.09e-22 90.9
MS.gene053026.t1 MTR_8g020610 37.908 153 86 5 28 178 22 167 3.12e-21 87.4
MS.gene053026.t1 MTR_2g086620 42.063 126 65 4 82 205 74 193 1.81e-20 85.5
MS.gene053026.t1 MTR_2g086630 42.063 126 65 4 82 205 74 193 2.58e-20 85.1
MS.gene053026.t1 MTR_2g086640 40.000 125 69 3 82 205 73 192 1.67e-19 82.8
MS.gene053026.t1 MTR_3g019810 36.747 166 84 7 17 177 119 268 8.99e-17 77.4
MS.gene053026.t1 MTR_2g030915 48.684 76 24 1 93 168 1 61 3.03e-16 71.6
MS.gene053026.t1 MTR_4g027415 38.583 127 71 3 26 151 22 142 3.44e-15 70.1
MS.gene053026.t1 MTR_2g072560 41.346 104 58 2 17 119 13 114 3.01e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053026.t1 AT5G39110 54.545 209 92 2 3 208 4 212 5.75e-72 218
MS.gene053026.t1 AT5G38940 60.963 187 70 2 21 205 25 210 7.47e-72 218
MS.gene053026.t1 AT5G38940 60.963 187 70 2 21 205 49 234 1.28e-71 218
MS.gene053026.t1 AT5G39120 53.846 208 94 1 3 208 4 211 1.29e-71 217
MS.gene053026.t1 AT5G38930 60.526 190 72 2 21 208 25 213 2.02e-71 216
MS.gene053026.t1 AT4G14630 57.005 207 80 3 10 207 7 213 1.36e-70 214
MS.gene053026.t1 AT5G39150 53.365 208 95 1 3 208 4 211 1.81e-70 214
MS.gene053026.t1 AT3G05950 58.209 201 80 3 11 208 14 213 2.12e-70 214
MS.gene053026.t1 AT5G39160 54.187 203 90 2 8 208 10 211 2.40e-70 214
MS.gene053026.t1 AT5G39190 54.187 203 90 2 8 208 10 211 2.46e-70 214
MS.gene053026.t1 AT5G39180 53.365 208 95 1 3 208 4 211 3.09e-70 213
MS.gene053026.t1 AT5G39130 53.695 203 91 2 8 208 10 211 3.88e-70 213
MS.gene053026.t1 AT5G38960 58.854 192 75 2 17 205 21 211 4.61e-69 211
MS.gene053026.t1 AT5G39160 52.217 203 90 2 8 208 10 207 1.50e-66 204
MS.gene053026.t1 AT3G04200 56.061 198 83 3 11 205 15 211 2.99e-64 198
MS.gene053026.t1 AT5G38910 54.245 212 92 5 1 208 1 211 1.13e-63 197
MS.gene053026.t1 AT3G04190 53.846 195 87 2 15 207 19 212 2.62e-62 193
MS.gene053026.t1 AT3G04150 50.935 214 98 4 1 208 1 213 2.91e-61 191
MS.gene053026.t1 AT3G04150 50.481 208 89 2 15 208 19 226 4.32e-61 191
MS.gene053026.t1 AT3G04180 53.061 196 87 3 15 207 19 212 6.66e-61 190
MS.gene053026.t1 AT3G04170 50.711 211 89 4 8 208 5 210 4.80e-59 185
MS.gene053026.t1 AT5G39190 47.761 201 84 1 8 208 10 189 3.56e-57 179
MS.gene053026.t1 AT5G39160 47.264 201 85 1 8 208 10 189 1.00e-56 178
MS.gene053026.t1 AT1G09560 48.925 186 88 3 20 203 22 202 1.68e-50 163
MS.gene053026.t1 AT3G62020 46.154 208 103 5 1 204 1 203 1.47e-49 161
MS.gene053026.t1 AT3G05930 45.960 198 99 3 8 202 9 201 1.95e-49 160
MS.gene053026.t1 AT1G02335 44.444 207 101 4 4 208 13 207 1.35e-48 158
MS.gene053026.t1 AT5G26700 45.652 184 90 4 26 207 25 200 4.67e-48 157
MS.gene053026.t1 AT5G38910 44.340 212 76 5 1 208 1 174 1.08e-44 147
MS.gene053026.t1 AT1G18980 42.584 209 108 5 3 206 7 208 1.79e-43 145
MS.gene053026.t1 AT3G62020 47.929 169 82 3 39 204 9 174 1.43e-42 142
MS.gene053026.t1 AT1G18970 40.385 208 112 5 1 206 11 208 2.69e-42 142
MS.gene053026.t1 AT1G10460 39.796 196 102 5 21 207 18 206 4.75e-38 131
MS.gene053026.t1 AT3G10080 38.021 192 110 4 17 204 21 207 3.28e-33 119
MS.gene053026.t1 AT3G10080 38.021 192 110 4 17 204 92 278 1.05e-32 119
MS.gene053026.t1 AT5G20630 39.779 181 98 4 1 179 1 172 1.69e-30 112
MS.gene053026.t1 AT5G61750 37.430 179 105 4 26 202 23 196 2.77e-29 108
MS.gene053026.t1 AT1G72610 40.385 156 86 3 26 179 19 169 1.23e-27 104
MS.gene053026.t1 AT1G74820 35.870 184 109 4 25 206 39 215 1.05e-26 102
MS.gene053026.t1 AT5G38950 54.688 64 29 0 145 208 2 65 7.08e-17 73.6
MS.gene053026.t1 AT5G39100 58.140 43 18 0 14 56 16 58 7.41e-12 58.9

Find 41 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATGCGGTTGCAATTTC+TGG 0.110205 6.2:+1321359 MS.gene053026:CDS
GTTACAGTTAATGAGATATT+AGG 0.232317 6.2:+1321101 MS.gene053026:CDS
TCATCTGATGTAACAAGTTT+TGG 0.242391 6.2:-1321017 None:intergenic
CAAATGTATCCTTAATAATA+TGG 0.259009 6.2:-1321409 None:intergenic
CATATTATTAAGGATACATT+TGG 0.284720 6.2:+1321410 MS.gene053026:CDS
AGGAATCATCCATATTATTA+AGG 0.333572 6.2:+1321400 MS.gene053026:CDS
TTAATAATATGGATGATTCC+TGG 0.372422 6.2:-1321398 None:intergenic
GATGTCTTTGTGTTTCCAAT+TGG 0.380749 6.2:+1321305 MS.gene053026:CDS
TCGAAGTGAATGAGACCAAT+TGG 0.436830 6.2:-1321320 None:intergenic
ACAAAAGTCTTGTAGAGGTA+TGG 0.444657 6.2:-1320412 None:intergenic
TCGTATTGACTTTGCACCTA+AGG 0.445205 6.2:+1321151 MS.gene053026:CDS
TAGAGCCACTGAGATACTTA+TGG 0.454603 6.2:+1321199 MS.gene053026:CDS
ATAAGTATCTCAGTGGCTCT+AGG 0.459488 6.2:-1321197 None:intergenic
ATATTATTAAGGATACATTT+GGG 0.466398 6.2:+1321411 MS.gene053026:CDS
CGTATTGACTTTGCACCTAA+GGG 0.508146 6.2:+1321152 MS.gene053026:CDS
CAAAAGTCTTGTAGAGGTAT+GGG 0.511458 6.2:-1320411 None:intergenic
AGGTATGGGCTCAGATGTAA+AGG 0.518401 6.2:-1320397 None:intergenic
TGTGGAGGATTTATACCCTT+AGG 0.521341 6.2:-1321167 None:intergenic
TTGGATGGTACTCTCAATGT+TGG 0.523241 6.2:+1321224 MS.gene053026:CDS
TTCGAACATAATACAGGAGA+TGG 0.524068 6.2:+1321338 MS.gene053026:CDS
ATTCACTTCGAACATAATAC+AGG 0.524459 6.2:+1321332 MS.gene053026:CDS
ATTGTCCATTTGAAAAGCCT+TGG 0.533652 6.2:-1321465 None:intergenic
TAAGTATCTCAGTGGCTCTA+GGG 0.541939 6.2:-1321196 None:intergenic
TTTCACAACTTTCTTAGCAG+TGG 0.545004 6.2:+1320365 MS.gene053026:CDS
GGACTTAGCAGTCAAAATCC+AGG 0.551815 6.2:+1321380 MS.gene053026:CDS
GGAGCTATATCGAGTCCAGC+TGG 0.557703 6.2:+1321062 MS.gene053026:CDS
CACTGAGATACTTATGGTGT+TGG 0.564561 6.2:+1321205 MS.gene053026:CDS
GCTACCAACGACATCAAGAC+GGG 0.566662 6.2:+1320438 MS.gene053026:CDS
ATATTAGGATTAAACACTCT+CGG 0.582491 6.2:+1321116 MS.gene053026:CDS
AATGTCACTTGAGAACCAGC+TGG 0.591175 6.2:-1321077 None:intergenic
GTGGCTCTAGGGTGAGTGTG+TGG 0.606974 6.2:-1321185 None:intergenic
GCCACACAAAAGTCTTGTAG+AGG 0.631195 6.2:-1320417 None:intergenic
ATTACAAAAGATCTCAACAA+AGG 0.638495 6.2:+1321281 MS.gene053026:CDS
ACCGCCCGTCTTGATGTCGT+TGG 0.642106 6.2:-1320442 None:intergenic
GGCTACCAACGACATCAAGA+CGG 0.642967 6.2:+1320437 MS.gene053026:CDS
GCTCTAGGGTGAGTGTGTGG+AGG 0.645576 6.2:-1321182 None:intergenic
GAGATACTTATGGTGTTGGA+TGG 0.650647 6.2:+1321209 MS.gene053026:CDS
TTATTCAAAAGTTCTCACCA+AGG 0.684450 6.2:+1321448 MS.gene053026:CDS
CAACACCATAAGTATCTCAG+TGG 0.715273 6.2:-1321204 None:intergenic
ACCAACGACATCAAGACGGG+CGG 0.716678 6.2:+1320441 MS.gene053026:CDS
TAATACAGGAGATGGAAATG+CGG 0.723652 6.2:+1321346 MS.gene053026:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTATTTTTATTAA+CGG + chr6.2:1320483-1320502 MS.gene053026:intron 0.0%
!!! GATTGATATTTTTTAATTTA+AGG - chr6.2:1320655-1320674 None:intergenic 10.0%
!!! TTTGATATTCTTTAATTTAA+GGG + chr6.2:1320813-1320832 MS.gene053026:intron 10.0%
!! ACTAAAAAGTTAAATGTATT+TGG + chr6.2:1320560-1320579 MS.gene053026:intron 15.0%
!! ATATTATTAAGGATACATTT+GGG + chr6.2:1321411-1321430 MS.gene053026:CDS 15.0%
!! ATGTGTTTAAATACATATAT+AGG - chr6.2:1320908-1320927 None:intergenic 15.0%
!! CATTTACTATTATATTACAA+TGG - chr6.2:1320940-1320959 None:intergenic 15.0%
!!! AGAACTTTTGAATAATTTTT+TGG - chr6.2:1321443-1321462 None:intergenic 15.0%
!!! GTTTGATATTCTTTAATTTA+AGG + chr6.2:1320812-1320831 MS.gene053026:intron 15.0%
!!! TATTTAGATTTAAGATACAA+AGG + chr6.2:1320614-1320633 MS.gene053026:intron 15.0%
!!! TTGATATTCTTTAATTTAAG+GGG + chr6.2:1320814-1320833 MS.gene053026:intron 15.0%
!! CAAATGTATCCTTAATAATA+TGG - chr6.2:1321412-1321431 None:intergenic 20.0%
!! CATATTATTAAGGATACATT+TGG + chr6.2:1321410-1321429 MS.gene053026:CDS 20.0%
!!! ATGATTTTAATTTTCAGTGT+TGG + chr6.2:1320971-1320990 MS.gene053026:intron 20.0%
!!! ATTTTGCATCACAATTTTAA+AGG + chr6.2:1320688-1320707 MS.gene053026:intron 20.0%
!!! TATTTGGTTCAAATTTAGAT+CGG + chr6.2:1320576-1320595 MS.gene053026:intron 20.0%
! AGGAATCATCCATATTATTA+AGG + chr6.2:1321400-1321419 MS.gene053026:CDS 25.0%
! ATATTAGGATTAAACACTCT+CGG + chr6.2:1321116-1321135 MS.gene053026:CDS 25.0%
! ATTACAAAAGATCTCAACAA+AGG + chr6.2:1321281-1321300 MS.gene053026:CDS 25.0%
! GTTACAGTTAATGAGATATT+AGG + chr6.2:1321101-1321120 MS.gene053026:CDS 25.0%
! TTAATAATATGGATGATTCC+TGG - chr6.2:1321401-1321420 None:intergenic 25.0%
!! TTCTTTTTCTCAGTAAAAGA+AGG + chr6.2:1321041-1321060 MS.gene053026:CDS 25.0%
!! TTGTTGAGATCTTTTGTAAT+GGG - chr6.2:1321281-1321300 None:intergenic 25.0%
!! TTTGTTGAGATCTTTTGTAA+TGG - chr6.2:1321282-1321301 None:intergenic 25.0%
!!! GGAGTATTTTGCAAATTTAA+AGG - chr6.2:1320523-1320542 None:intergenic 25.0%
!!! TCAACAACGCATTTTTTTTA+TGG + chr6.2:1320749-1320768 MS.gene053026:intron 25.0%
ATTCACTTCGAACATAATAC+AGG + chr6.2:1321332-1321351 MS.gene053026:CDS 30.0%
TAGTTATATGCAAGATCAGA+GGG - chr6.2:1320544-1320563 None:intergenic 30.0%
TTAGTTATATGCAAGATCAG+AGG - chr6.2:1320545-1320564 None:intergenic 30.0%
TTATTCAAAAGTTCTCACCA+AGG + chr6.2:1321448-1321467 MS.gene053026:CDS 30.0%
! TCATCTGATGTAACAAGTTT+TGG - chr6.2:1321020-1321039 None:intergenic 30.0%
!!! TAATTTTCAGTGTTGGTGAA+CGG + chr6.2:1320978-1320997 MS.gene053026:intron 30.0%
ATTGTCCATTTGAAAAGCCT+TGG - chr6.2:1321468-1321487 None:intergenic 35.0%
GATGTCTTTGTGTTTCCAAT+TGG + chr6.2:1321305-1321324 MS.gene053026:CDS 35.0%
TAATACAGGAGATGGAAATG+CGG + chr6.2:1321346-1321365 MS.gene053026:CDS 35.0%
TTCGAACATAATACAGGAGA+TGG + chr6.2:1321338-1321357 MS.gene053026:CDS 35.0%
TTTCACAACTTTCTTAGCAG+TGG + chr6.2:1320365-1320384 MS.gene053026:CDS 35.0%
! ACAAAAGTCTTGTAGAGGTA+TGG - chr6.2:1320415-1320434 None:intergenic 35.0%
! CAAAAGTCTTGTAGAGGTAT+GGG - chr6.2:1320414-1320433 None:intergenic 35.0%
AGTTCCTCATATTCGCGAAA+CGG - chr6.2:1320849-1320868 None:intergenic 40.0%
ATAAGTATCTCAGTGGCTCT+AGG - chr6.2:1321200-1321219 None:intergenic 40.0%
CAACACCATAAGTATCTCAG+TGG - chr6.2:1321207-1321226 None:intergenic 40.0%
CACTGAGATACTTATGGTGT+TGG + chr6.2:1321205-1321224 MS.gene053026:CDS 40.0%
TAGAGCCACTGAGATACTTA+TGG + chr6.2:1321199-1321218 MS.gene053026:CDS 40.0%
TCGAAGTGAATGAGACCAAT+TGG - chr6.2:1321323-1321342 None:intergenic 40.0%
TGTGGAGGATTTATACCCTT+AGG - chr6.2:1321170-1321189 None:intergenic 40.0%
TTGGATGGTACTCTCAATGT+TGG + chr6.2:1321224-1321243 MS.gene053026:CDS 40.0%
! ACCTCTACAAGACTTTTGTG+TGG + chr6.2:1320416-1320435 MS.gene053026:CDS 40.0%
! GAGATACTTATGGTGTTGGA+TGG + chr6.2:1321209-1321228 MS.gene053026:CDS 40.0%
! TAAGTATCTCAGTGGCTCTA+GGG - chr6.2:1321199-1321218 None:intergenic 40.0%
! TCTCACCAAGGCTTTTCAAA+TGG + chr6.2:1321460-1321479 MS.gene053026:CDS 40.0%
! TTTTCCGTTTCGCGAATATG+AGG + chr6.2:1320842-1320861 MS.gene053026:intron 40.0%
!! CGTATTGACTTTGCACCTAA+GGG + chr6.2:1321152-1321171 MS.gene053026:CDS 40.0%
!! TCGTATTGACTTTGCACCTA+AGG + chr6.2:1321151-1321170 MS.gene053026:CDS 40.0%
AGGTATGGGCTCAGATGTAA+AGG - chr6.2:1320400-1320419 None:intergenic 45.0%
GGAAATGCGGTTGCAATTTC+TGG + chr6.2:1321359-1321378 MS.gene053026:CDS 45.0%
GGACTTAGCAGTCAAAATCC+AGG + chr6.2:1321380-1321399 MS.gene053026:CDS 45.0%
! AATGTCACTTGAGAACCAGC+TGG - chr6.2:1321080-1321099 None:intergenic 45.0%
! GCCACACAAAAGTCTTGTAG+AGG - chr6.2:1320420-1320439 None:intergenic 45.0%
!!! ATTGATATTTTTTAATTTAA+GGG - chr6.2:1320654-1320673 None:intergenic 5.0%
GCTACCAACGACATCAAGAC+GGG + chr6.2:1320438-1320457 MS.gene053026:CDS 50.0%
GGCTACCAACGACATCAAGA+CGG + chr6.2:1320437-1320456 MS.gene053026:CDS 50.0%
ACCAACGACATCAAGACGGG+CGG + chr6.2:1320441-1320460 MS.gene053026:CDS 55.0%
GGAGCTATATCGAGTCCAGC+TGG + chr6.2:1321062-1321081 MS.gene053026:CDS 55.0%
ACCGCCCGTCTTGATGTCGT+TGG - chr6.2:1320445-1320464 None:intergenic 60.0%
!! GCTCTAGGGTGAGTGTGTGG+AGG - chr6.2:1321185-1321204 None:intergenic 60.0%
!! GTGGCTCTAGGGTGAGTGTG+TGG - chr6.2:1321188-1321207 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 1320345 1321502 1320345 ID=MS.gene053026
chr6.2 mRNA 1320345 1321502 1320345 ID=MS.gene053026.t1;Parent=MS.gene053026
chr6.2 exon 1320345 1320462 1320345 ID=MS.gene053026.t1.exon1;Parent=MS.gene053026.t1
chr6.2 CDS 1320345 1320462 1320345 ID=cds.MS.gene053026.t1;Parent=MS.gene053026.t1
chr6.2 exon 1320988 1321502 1320988 ID=MS.gene053026.t1.exon2;Parent=MS.gene053026.t1
chr6.2 CDS 1320988 1321502 1320988 ID=cds.MS.gene053026.t1;Parent=MS.gene053026.t1
Gene Sequence

>MS.gene053026

ATGAAGAGTACTTGCTTGTTTTTCACAACTTTCTTAGCAGTGGCATCTTTTGCCTTTACATCTGAGCCCATACCTCTACAAGACTTTTGTGTGGCTACCAACGACATCAAGACGGGCGGTTTGTATATATATATAACAATTTATTTTATTTTTATTAACGGTTAATCAATTTAGTCCTTTAAATTTGCAAAATACTCCCTCTGATCTTGCATATAACTAAAAAGTTAAATGTATTTGGTTCAAATTTAGATCGGATACATTTGACTTTCTATTTAGATTTAAGATACAAAGGATTAACAATTTTGTCCCTTAAATTAAAAAATATCAATCACTTTTCTTTCAAATTTTGCATCACAATTTTAAAGGTTCTTTACTTGTTTTGATAGAATGAATGACTATTTAAATCAACAACGCATTTTTTTTATGGATGTTTACTAAAGAATTTTTTTTTTCAGAGAGACTAAATTGTTTGATATTCTTTAATTTAAGGGGCTAATTTTTCCGTTTCGCGAATATGAGGAACTACATTATTGACACTTACAATTTCAAGAACTAACTATCCTATATATGTATTTAAACACATGTAACACATCCATTGTAATATAATAGTAAATGACTTTTCTTTGATGATTTTAATTTTCAGTGTTGGTGAACGGACAATACTGCAAAGATCCAAAACTTGTTACATCAGATGATTTCTTTTTCTCAGTAAAAGAAGGAGCTATATCGAGTCCAGCTGGTTCTCAAGTGACATTAGTTACAGTTAATGAGATATTAGGATTAAACACTCTCGGCGTCTCTCTTGCTCGTATTGACTTTGCACCTAAGGGTATAAATCCTCCACACACTCACCCTAGAGCCACTGAGATACTTATGGTGTTGGATGGTACTCTCAATGTTGGCTTTTATACTTCTAATCAAGAAAGTAGTACTCCCATTACAAAAGATCTCAACAAAGGAGATGTCTTTGTGTTTCCAATTGGTCTCATTCACTTCGAACATAATACAGGAGATGGAAATGCGGTTGCAATTTCTGGACTTAGCAGTCAAAATCCAGGAATCATCCATATTATTAAGGATACATTTGGGTTTAATCCAAAAAATTATTCAAAAGTTCTCACCAAGGCTTTTCAAATGGACAATAACATACATAGTTGA
Protein sequence

>MS.gene053026.t1

MKSTCLFFTTFLAVASFAFTSEPIPLQDFCVATNDIKTGVLVNGQYCKDPKLVTSDDFFFSVKEGAISSPAGSQVTLVTVNEILGLNTLGVSLARIDFAPKGINPPHTHPRATEILMVLDGTLNVGFYTSNQESSTPITKDLNKGDVFVFPIGLIHFEHNTGDGNAVAISGLSSQNPGIIHIIKDTFGFNPKNYSKVLTKAFQMDNNIHS