AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053029

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053029.t1 MTR_6g005350 92.233 206 16 0 1 206 14 219 6.00e-141 392
MS.gene053029.t1 MTR_6g005340 77.778 207 45 1 1 206 14 220 1.80e-109 313
MS.gene053029.t1 MTR_6g005360 77.295 207 46 1 1 206 14 220 3.47e-109 312
MS.gene053029.t1 MTR_6g005330 77.295 207 46 1 1 206 14 220 5.87e-109 311
MS.gene053029.t1 MTR_6g005310 77.184 206 46 1 1 205 14 219 3.74e-108 309
MS.gene053029.t1 MTR_4g017050 68.116 207 64 2 2 206 15 221 4.51e-92 269
MS.gene053029.t1 MTR_5g046410 68.116 207 64 2 2 206 15 221 4.71e-92 268
MS.gene053029.t1 MTR_5g046430 68.116 207 64 2 2 206 15 221 4.71e-92 268
MS.gene053029.t1 MTR_4g017030 68.116 207 64 2 2 206 15 221 4.71e-92 268
MS.gene053029.t1 MTR_1g079490 68.269 208 63 3 2 206 15 222 1.04e-91 268
MS.gene053029.t1 MTR_6g005380 69.744 195 57 2 1 193 14 208 1.10e-90 265
MS.gene053029.t1 MTR_4g017040 67.150 207 66 2 2 206 15 221 1.51e-90 265
MS.gene053029.t1 MTR_2g019250 67.150 207 66 2 2 206 15 221 1.84e-90 265
MS.gene053029.t1 MTR_1g023770 55.000 200 79 4 5 201 18 209 5.74e-66 202
MS.gene053029.t1 MTR_2g030855 55.500 200 81 5 5 201 18 212 1.82e-64 198
MS.gene053029.t1 MTR_2g031270 56.250 192 76 5 13 201 27 213 4.66e-62 192
MS.gene053029.t1 MTR_2g030895 55.618 178 75 3 28 201 1 178 2.08e-58 182
MS.gene053029.t1 MTR_2g030865 54.494 178 77 3 28 201 1 178 8.94e-57 177
MS.gene053029.t1 MTR_1g085500 44.776 201 104 4 3 200 17 213 1.09e-51 166
MS.gene053029.t1 MTR_7g111240 45.408 196 100 4 9 201 20 211 7.13e-46 151
MS.gene053029.t1 MTR_1g085140 41.709 199 109 4 6 201 21 215 3.06e-44 147
MS.gene053029.t1 MTR_7g111240 44.898 196 98 5 9 201 20 208 7.69e-43 143
MS.gene053029.t1 MTR_2g031300 49.398 166 61 3 28 190 1 146 4.49e-42 139
MS.gene053029.t1 MTR_1g112200 40.196 204 100 6 5 201 19 207 7.18e-38 130
MS.gene053029.t1 MTR_5g036570 42.132 197 106 5 9 201 27 219 1.44e-37 130
MS.gene053029.t1 MTR_1g060120 36.181 199 118 4 9 201 26 221 2.46e-33 119
MS.gene053029.t1 MTR_8g020750 41.176 170 94 3 15 182 25 190 3.32e-31 113
MS.gene053029.t1 MTR_2g041570 36.898 187 111 4 15 199 23 204 5.11e-30 110
MS.gene053029.t1 MTR_2g041550 36.816 201 117 5 3 198 8 203 5.16e-30 110
MS.gene053029.t1 MTR_2g041580 37.097 186 110 4 15 198 23 203 5.62e-30 110
MS.gene053029.t1 MTR_8g020590 35.979 189 114 4 13 199 19 202 2.81e-29 108
MS.gene053029.t1 MTR_8g007300 39.779 181 104 3 9 187 26 203 3.48e-28 105
MS.gene053029.t1 MTR_4g052770 40.876 137 77 3 66 201 72 205 6.53e-28 104
MS.gene053029.t1 MTR_4g052780 40.876 137 77 3 66 201 72 205 1.06e-27 104
MS.gene053029.t1 MTR_3g019680 36.098 205 116 6 4 201 8 204 2.59e-27 103
MS.gene053029.t1 MTR_2g036120 35.644 202 123 4 1 201 10 205 2.74e-27 103
MS.gene053029.t1 MTR_2g086620 41.791 134 74 3 69 201 74 204 1.16e-26 101
MS.gene053029.t1 MTR_2g086630 41.791 134 74 3 69 201 74 204 1.33e-26 101
MS.gene053029.t1 MTR_2g086640 40.741 135 76 3 68 201 72 203 2.49e-26 100
MS.gene053029.t1 MTR_3g019710 34.653 202 125 4 1 201 10 205 4.13e-26 100
MS.gene053029.t1 MTR_2g044040 34.158 202 126 4 1 201 10 205 5.93e-26 99.8
MS.gene053029.t1 MTR_3g019650 35.122 205 118 6 4 201 8 204 9.65e-26 99.4
MS.gene053029.t1 MTR_8g020630 34.010 197 123 4 6 201 15 205 1.85e-25 98.6
MS.gene053029.t1 MTR_8g020770 37.895 190 109 5 15 201 25 208 2.84e-25 98.2
MS.gene053029.t1 MTR_8g020650 35.106 188 115 4 15 201 24 205 5.46e-25 97.4
MS.gene053029.t1 MTR_2g045100 35.323 201 119 5 4 201 13 205 3.04e-24 95.5
MS.gene053029.t1 MTR_5g031460 31.658 199 129 4 4 201 13 205 1.19e-23 94.0
MS.gene053029.t1 MTR_8g020670 33.684 190 119 4 13 201 22 205 8.70e-23 91.7
MS.gene053029.t1 MTR_8g020760 34.737 190 117 4 13 201 24 207 2.90e-22 90.1
MS.gene053029.t1 MTR_0284s0010 33.668 199 121 5 6 201 15 205 2.96e-22 90.1
MS.gene053029.t1 MTR_7g011340 33.854 192 116 5 13 201 22 205 4.61e-22 89.7
MS.gene053029.t1 MTR_8g020763 35.057 174 107 3 30 201 17 186 6.03e-22 89.0
MS.gene053029.t1 MTR_8g020610 33.333 189 117 6 15 201 22 203 6.27e-21 86.7
MS.gene053029.t1 MTR_3g096330 34.857 175 98 3 2 162 557 729 1.47e-20 89.4
MS.gene053029.t1 MTR_4g010340 35.057 174 105 5 30 201 34 201 4.24e-20 84.3
MS.gene053029.t1 MTR_2g019780 31.915 188 119 5 15 201 29 208 5.59e-19 81.6
MS.gene053029.t1 MTR_2g030915 52.000 75 22 1 80 154 1 61 1.70e-18 77.4
MS.gene053029.t1 MTR_3g073170 30.000 190 120 6 15 201 27 206 1.52e-15 72.4
MS.gene053029.t1 MTR_3g019810 30.000 200 125 7 1 198 116 302 4.59e-14 69.7
MS.gene053029.t1 MTR_4g027415 36.719 128 71 4 13 137 22 142 1.89e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053029.t1 AT3G05950 57.843 204 81 4 2 201 19 221 4.22e-69 211
MS.gene053029.t1 AT5G39160 56.158 203 84 4 3 201 18 219 4.44e-69 210
MS.gene053029.t1 AT5G39190 56.158 203 84 4 3 201 18 219 7.83e-69 210
MS.gene053029.t1 AT5G39130 55.665 203 85 4 3 201 18 219 1.21e-68 209
MS.gene053029.t1 AT5G38930 58.163 196 79 2 9 201 26 221 1.28e-68 209
MS.gene053029.t1 AT5G39110 55.172 203 87 3 3 201 18 220 1.35e-68 209
MS.gene053029.t1 AT5G38940 57.143 196 81 2 9 201 26 221 1.54e-68 209
MS.gene053029.t1 AT5G38940 57.143 196 81 2 9 201 50 245 2.66e-68 209
MS.gene053029.t1 AT5G39150 55.779 199 84 4 7 201 21 219 1.81e-67 206
MS.gene053029.t1 AT5G39120 55.779 199 84 4 7 201 21 219 2.77e-67 206
MS.gene053029.t1 AT5G39180 55.779 199 84 4 7 201 21 219 5.34e-67 205
MS.gene053029.t1 AT5G39160 55.172 203 82 4 3 201 18 215 1.54e-66 204
MS.gene053029.t1 AT4G14630 53.960 202 89 3 4 201 21 222 2.10e-65 201
MS.gene053029.t1 AT5G38960 53.960 202 89 2 4 201 21 222 2.87e-64 198
MS.gene053029.t1 AT5G38910 56.633 196 82 2 9 201 24 219 6.37e-64 197
MS.gene053029.t1 AT3G04200 54.902 204 87 4 2 201 20 222 3.22e-62 193
MS.gene053029.t1 AT5G39160 50.746 201 76 3 3 201 18 197 2.88e-59 185
MS.gene053029.t1 AT5G39190 50.746 201 76 3 3 201 18 197 5.54e-59 184
MS.gene053029.t1 AT3G04150 50.980 204 95 4 2 201 19 221 1.42e-58 184
MS.gene053029.t1 AT3G04150 49.074 216 94 4 2 201 19 234 3.13e-58 183
MS.gene053029.t1 AT3G04190 49.510 204 98 4 2 201 19 221 1.19e-55 176
MS.gene053029.t1 AT3G04170 50.490 204 93 5 2 201 19 218 1.30e-55 176
MS.gene053029.t1 AT3G04180 48.529 204 100 4 2 201 19 221 6.94e-55 174
MS.gene053029.t1 AT1G02335 43.627 204 108 4 1 201 16 215 3.38e-50 162
MS.gene053029.t1 AT5G26700 43.564 202 102 5 4 201 16 209 1.59e-48 158
MS.gene053029.t1 AT1G09560 44.162 197 103 4 9 202 24 216 1.65e-47 155
MS.gene053029.t1 AT3G05930 43.655 197 103 4 9 201 23 215 8.96e-47 154
MS.gene053029.t1 AT3G62020 42.786 201 107 5 5 201 19 215 2.81e-46 152
MS.gene053029.t1 AT1G18970 42.857 196 103 5 9 201 29 218 3.44e-41 139
MS.gene053029.t1 AT1G18980 43.878 196 101 5 9 201 29 218 5.59e-41 139
MS.gene053029.t1 AT3G62020 43.017 179 96 4 27 201 10 186 1.07e-40 137
MS.gene053029.t1 AT5G38910 43.878 196 70 3 9 201 24 182 8.72e-39 132
MS.gene053029.t1 AT3G10080 39.109 202 116 4 4 201 21 219 2.89e-37 129
MS.gene053029.t1 AT3G10080 39.109 202 116 4 4 201 92 290 1.67e-36 129
MS.gene053029.t1 AT1G10460 37.186 199 117 5 9 201 19 215 8.75e-34 120
MS.gene053029.t1 AT5G61750 40.884 181 102 3 9 187 19 196 3.50e-33 118
MS.gene053029.t1 AT5G20630 37.500 176 104 3 3 176 12 183 8.82e-29 107
MS.gene053029.t1 AT1G72610 35.638 188 114 4 13 198 19 201 8.05e-28 104
MS.gene053029.t1 AT1G74820 35.122 205 102 6 11 201 38 225 4.74e-27 103
MS.gene053029.t1 AT5G38950 51.562 64 30 1 131 193 2 65 1.96e-12 61.6

Find 43 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTGTTAAGGAGGTATT+TGG 0.136261 6.2:+1302724 MS.gene053029:CDS
GGAAATGCAGCTGCCATTTC+CGG 0.176460 6.2:+1302673 MS.gene053029:CDS
TCTTCTGGTGTAACAAGTTT+TGG 0.236271 6.2:-1302334 None:intergenic
ACAATCTTCAGAAACAATTC+TGG 0.305861 6.2:+1302809 MS.gene053029:CDS
TAGTGATAACTCTTGAATTA+TGG 0.314281 6.2:-1302705 None:intergenic
CCCACAGTTAGTGAGATATT+AGG 0.322926 6.2:+1302418 MS.gene053029:CDS
AAGAGTTATCACTATTGTTA+AGG 0.372185 6.2:+1302714 MS.gene053029:CDS
GAAATGCAGCTGCCATTTCC+GGG 0.374807 6.2:+1302674 MS.gene053029:CDS
GATGTCTTTGTGTTTCCAAT+TGG 0.380749 6.2:+1302619 MS.gene053029:CDS
CAAAAGTCTTGCAGAGGATT+GGG 0.395175 6.2:-1301762 None:intergenic
TGGAAGTGAATTAGACCAAT+TGG 0.397935 6.2:-1302634 None:intergenic
CTATTGTTAAGGAGGTATTT+GGG 0.412780 6.2:+1302725 MS.gene053029:CDS
TCGTATTGACTTTGCACCTA+AGG 0.416056 6.2:+1302468 MS.gene053029:CDS
ACAAAAGTCTTGCAGAGGAT+TGG 0.427807 6.2:-1301763 None:intergenic
TGAATTATGGCTGTTAAGCC+CGG 0.446254 6.2:-1302692 None:intergenic
ATATTAGGTTTAAATACTCT+TGG 0.447783 6.2:+1302433 MS.gene053029:CDS
ATGGCTGTTAAGCCCGGAAA+TGG 0.455636 6.2:-1302686 None:intergenic
TGTGGAGGATTTAGACCCTT+AGG 0.459506 6.2:-1302484 None:intergenic
TTGGAGGGTACTCTCAATGT+TGG 0.485489 6.2:+1302541 MS.gene053029:CDS
CGTATTGACTTTGCACCTAA+GGG 0.496446 6.2:+1302469 MS.gene053029:CDS
TGAGATACTTATAGTGTTGG+AGG 0.502762 6.2:+1302525 MS.gene053029:CDS
TGCTGAGATACTTATAGTGT+TGG 0.519488 6.2:+1302522 MS.gene053029:CDS
AATTCACTTCCAACATAATG+TGG 0.523127 6.2:+1302645 MS.gene053029:CDS
ATAAGTATCTCAGCAGCTCT+AGG 0.523792 6.2:-1302514 None:intergenic
ATTGTCCACTTGAAGAGCCT+TGG 0.539930 6.2:-1302776 None:intergenic
TATCAACGACATCAAGACTT+GGG 0.542177 6.2:+1301791 MS.gene053029:CDS
GAAAACATATCAAGTCTACT+TGG 0.544144 6.2:+1302379 MS.gene053029:CDS
TCTTCAGAAACAATTCTGGT+TGG 0.548729 6.2:+1302813 MS.gene053029:CDS
ACCTAATATCTCACTAACTG+TGG 0.565377 6.2:-1302419 None:intergenic
ATTCACTTCCAACATAATGT+GGG 0.576017 6.2:+1302646 MS.gene053029:CDS
TCTCACCAAGGCTCTTCAAG+TGG 0.580497 6.2:+1302771 MS.gene053029:CDS
AGTTATCACTATTGTTAAGG+AGG 0.582820 6.2:+1302717 MS.gene053029:CDS
CCTAATATCTCACTAACTGT+GGG 0.596269 6.2:-1302418 None:intergenic
TTCACTTCCAACATAATGTG+GGG 0.602338 6.2:+1302647 MS.gene053029:CDS
ATTACAAAAGTTCTCAACAA+AGG 0.621502 6.2:+1302595 MS.gene053029:CDS
TTATCAACGACATCAAGACT+TGG 0.624303 6.2:+1301790 MS.gene053029:CDS
TTCTTCAGAAGTTCTCACCA+AGG 0.626705 6.2:+1302759 MS.gene053029:CDS
ATCACACAAAAGTCTTGCAG+AGG 0.638732 6.2:-1301768 None:intergenic
GAGATACTTATAGTGTTGGA+GGG 0.645513 6.2:+1302526 MS.gene053029:CDS
ATCAACGACATCAAGACTTG+GGG 0.661042 6.2:+1301792 MS.gene053029:CDS
GCAGCTCTAGGATGAGCATG+TGG 0.671856 6.2:-1302502 None:intergenic
GCTCTAGGATGAGCATGTGG+AGG 0.677969 6.2:-1302499 None:intergenic
TCACTTCCAACATAATGTGG+GGG 0.678024 6.2:+1302648 MS.gene053029:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGAAATTTATCTAATTTA+AGG - chr6.2:1302002-1302021 None:intergenic 10.0%
!! TTGAAATTTATCTAATTTAA+GGG - chr6.2:1302001-1302020 None:intergenic 10.0%
!! AAATGTATTTGATCTAAATT+TGG - chr6.2:1301934-1301953 None:intergenic 15.0%
!! ATATTAGGTTTAAATACTCT+TGG + chr6.2:1302433-1302452 MS.gene053029:CDS 20.0%
!! ATGTGTTTAAATGCATATAT+AGG - chr6.2:1302227-1302246 None:intergenic 20.0%
!!! ATAAAATACATTTGACCTTT+TGG - chr6.2:1301911-1301930 None:intergenic 20.0%
!!! TTACTGTAGAAATATTTTGA+TGG + chr6.2:1302086-1302105 MS.gene053029:intron 20.0%
!!! TTTAGTTCTTGAAATTGTAA+GGG - chr6.2:1302190-1302209 None:intergenic 20.0%
!!! TTTTAGTTCTTGAAATTGTA+AGG - chr6.2:1302191-1302210 None:intergenic 20.0%
! AAGAGTTATCACTATTGTTA+AGG + chr6.2:1302714-1302733 MS.gene053029:CDS 25.0%
! ATTACAAAAGTTCTCAACAA+AGG + chr6.2:1302595-1302614 MS.gene053029:CDS 25.0%
! ATTGACATTCTTTACTTTGA+AGG + chr6.2:1302122-1302141 MS.gene053029:intron 25.0%
! TAGTGATAACTCTTGAATTA+TGG - chr6.2:1302708-1302727 None:intergenic 25.0%
! TGATCTTAGATATAACCAAA+AGG + chr6.2:1301893-1301912 MS.gene053029:intron 25.0%
AATTCACTTCCAACATAATG+TGG + chr6.2:1302645-1302664 MS.gene053029:CDS 30.0%
ACAATCTTCAGAAACAATTC+TGG + chr6.2:1302809-1302828 MS.gene053029:CDS 30.0%
ACTGAGAAAAAGAAATCTTC+TGG - chr6.2:1302352-1302371 None:intergenic 30.0%
AGTTATCACTATTGTTAAGG+AGG + chr6.2:1302717-1302736 MS.gene053029:CDS 30.0%
ATTCACTTCCAACATAATGT+GGG + chr6.2:1302646-1302665 MS.gene053029:CDS 30.0%
GAAAACATATCAAGTCTACT+TGG + chr6.2:1302379-1302398 MS.gene053029:CDS 30.0%
GTTATATTGTTACAAGACGA+TGG - chr6.2:1302259-1302278 None:intergenic 30.0%
! GGAGTATTTCGCAAATTTAA+AGG - chr6.2:1301870-1301889 None:intergenic 30.0%
! TGAGAACTTTTGTAATGAGA+CGG - chr6.2:1302591-1302610 None:intergenic 30.0%
! TGGTTATATCTAAGATCAGA+TGG - chr6.2:1301891-1301910 None:intergenic 30.0%
!! ACTATTGTTAAGGAGGTATT+TGG + chr6.2:1302724-1302743 MS.gene053029:CDS 30.0%
!! CTATTGTTAAGGAGGTATTT+GGG + chr6.2:1302725-1302744 MS.gene053029:CDS 30.0%
!! TAATTTTCAGTGTTGCTGAA+TGG + chr6.2:1302295-1302314 MS.gene053029:intron 30.0%
!!! TTGTAATGAGACGGTTTTTT+GGG - chr6.2:1302582-1302601 None:intergenic 30.0%
!!! TTTGTAATGAGACGGTTTTT+TGG - chr6.2:1302583-1302602 None:intergenic 30.0%
ACCTAATATCTCACTAACTG+TGG - chr6.2:1302422-1302441 None:intergenic 35.0%
AGTTCTTGAAATTGTAAGGG+TGG - chr6.2:1302187-1302206 None:intergenic 35.0%
CCTAATATCTCACTAACTGT+GGG - chr6.2:1302421-1302440 None:intergenic 35.0%
GATGTCTTTGTGTTTCCAAT+TGG + chr6.2:1302619-1302638 MS.gene053029:CDS 35.0%
TATCAACGACATCAAGACTT+GGG + chr6.2:1301791-1301810 MS.gene053029:CDS 35.0%
TCTTCAGAAACAATTCTGGT+TGG + chr6.2:1302813-1302832 MS.gene053029:CDS 35.0%
TGCTGAGATACTTATAGTGT+TGG + chr6.2:1302522-1302541 MS.gene053029:CDS 35.0%
TGGAAGTGAATTAGACCAAT+TGG - chr6.2:1302637-1302656 None:intergenic 35.0%
TTATCAACGACATCAAGACT+TGG + chr6.2:1301790-1301809 MS.gene053029:CDS 35.0%
TTCACTTCCAACATAATGTG+GGG + chr6.2:1302647-1302666 MS.gene053029:CDS 35.0%
! GAGATACTTATAGTGTTGGA+GGG + chr6.2:1302526-1302545 MS.gene053029:CDS 35.0%
! TCTTCTGGTGTAACAAGTTT+TGG - chr6.2:1302337-1302356 None:intergenic 35.0%
! TGAGATACTTATAGTGTTGG+AGG + chr6.2:1302525-1302544 MS.gene053029:CDS 35.0%
ACAAAAGTCTTGCAGAGGAT+TGG - chr6.2:1301766-1301785 None:intergenic 40.0%
ATAAGTATCTCAGCAGCTCT+AGG - chr6.2:1302517-1302536 None:intergenic 40.0%
ATCAACGACATCAAGACTTG+GGG + chr6.2:1301792-1301811 MS.gene053029:CDS 40.0%
ATCACACAAAAGTCTTGCAG+AGG - chr6.2:1301771-1301790 None:intergenic 40.0%
CAAAAGTCTTGCAGAGGATT+GGG - chr6.2:1301765-1301784 None:intergenic 40.0%
CCCACAGTTAGTGAGATATT+AGG + chr6.2:1302418-1302437 MS.gene053029:CDS 40.0%
TCACTTCCAACATAATGTGG+GGG + chr6.2:1302648-1302667 MS.gene053029:CDS 40.0%
TGAATTATGGCTGTTAAGCC+CGG - chr6.2:1302695-1302714 None:intergenic 40.0%
TTCTTCAGAAGTTCTCACCA+AGG + chr6.2:1302759-1302778 MS.gene053029:CDS 40.0%
!! CGTATTGACTTTGCACCTAA+GGG + chr6.2:1302469-1302488 MS.gene053029:CDS 40.0%
!! TCGTATTGACTTTGCACCTA+AGG + chr6.2:1302468-1302487 MS.gene053029:CDS 40.0%
ATTGTCCACTTGAAGAGCCT+TGG - chr6.2:1302779-1302798 None:intergenic 45.0%
TGTGGAGGATTTAGACCCTT+AGG - chr6.2:1302487-1302506 None:intergenic 45.0%
TTCCAACATAATGTGGGGGA+TGG + chr6.2:1302652-1302671 MS.gene053029:CDS 45.0%
TTCCATCCCCCACATTATGT+TGG - chr6.2:1302657-1302676 None:intergenic 45.0%
!! TTGGAGGGTACTCTCAATGT+TGG + chr6.2:1302541-1302560 MS.gene053029:CDS 45.0%
ATGGCTGTTAAGCCCGGAAA+TGG - chr6.2:1302689-1302708 None:intergenic 50.0%
TCTCACCAAGGCTCTTCAAG+TGG + chr6.2:1302771-1302790 MS.gene053029:CDS 50.0%
! GAAATGCAGCTGCCATTTCC+GGG + chr6.2:1302674-1302693 MS.gene053029:CDS 50.0%
! GGAAATGCAGCTGCCATTTC+CGG + chr6.2:1302673-1302692 MS.gene053029:CDS 50.0%
!! GCAGCTCTAGGATGAGCATG+TGG - chr6.2:1302505-1302524 None:intergenic 55.0%
!! GCTCTAGGATGAGCATGTGG+AGG - chr6.2:1302502-1302521 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 1301735 1302846 1301735 ID=MS.gene053029
chr6.2 mRNA 1301735 1302846 1301735 ID=MS.gene053029.t1;Parent=MS.gene053029
chr6.2 exon 1301735 1301813 1301735 ID=MS.gene053029.t1.exon1;Parent=MS.gene053029.t1
chr6.2 CDS 1301735 1301813 1301735 ID=cds.MS.gene053029.t1;Parent=MS.gene053029.t1
chr6.2 exon 1302305 1302846 1302305 ID=MS.gene053029.t1.exon2;Parent=MS.gene053029.t1
chr6.2 CDS 1302305 1302846 1302305 ID=cds.MS.gene053029.t1;Parent=MS.gene053029.t1
Gene Sequence

>MS.gene053029

ATGACATCTTTTGTCTTTACATTTGATCCCAATCCTCTGCAAGACTTTTGTGTGATTATCAACGACATCAAGACTTGGGGTATGTATATATAATAATTTATTTTATTTTTATTAACAGTTGATCGATTTAGTCCTTTAAATTTGCGAAATACTCCATCTGATCTTAGATATAACCAAAAGGTCAAATGTATTTTATCCAAATTTAGATCAAATACATTTAAATTTTTGCTTATATATAAGACAAAAGCGATTAATTACTTTGTCCCTTAAATTAGATAAATTTCAATCAAATTAGTCACTTTTTCAAATTTTGATGCAATGAAATATTATTTTATTCGTTTTGATGAATATTTACTGTAGAAATATTTTGATGGATGAACTAAATTGATTGACATTCTTTACTTTGAAGGAATAATTTAGTGTTTCATATAGTTGTAGAACTAAATTATCCACCCTTACAATTTCAAGAACTAAAATGCATTTTTTTCTCCTATATATGCATTTAAACACATGCGTCACATCCATCGTCTTGTAACAATATAACTTTTCTCTATTCAATTTAATTTTCAGTGTTGCTGAATGGAAAATGCTACAAAGATCCAAAACTTGTTACACCAGAAGATTTCTTTTTCTCAGTAAAAGAAGAAAACATATCAAGTCTACTTGGTTCGCAAGTGACACTACCCACAGTTAGTGAGATATTAGGTTTAAATACTCTTGGCATCTCTGTTGCTCGTATTGACTTTGCACCTAAGGGTCTAAATCCTCCACATGCTCATCCTAGAGCTGCTGAGATACTTATAGTGTTGGAGGGTACTCTCAATGTTGGTTTTGTTACTTCTAACCCAAAAAACCGTCTCATTACAAAAGTTCTCAACAAAGGAGATGTCTTTGTGTTTCCAATTGGTCTAATTCACTTCCAACATAATGTGGGGGATGGAAATGCAGCTGCCATTTCCGGGCTTAACAGCCATAATTCAAGAGTTATCACTATTGTTAAGGAGGTATTTGGGTCTGATAAAATTTCTTCAGAAGTTCTCACCAAGGCTCTTCAAGTGGACAATAACATAGTTGACAATCTTCAGAAACAATTCTGGTTGGACAACAATTAG
Protein sequence

>MS.gene053029.t1

MTSFVFTFDPNPLQDFCVIINDIKTWVLLNGKCYKDPKLVTPEDFFFSVKEENISSLLGSQVTLPTVSEILGLNTLGISVARIDFAPKGLNPPHAHPRAAEILIVLEGTLNVGFVTSNPKNRLITKVLNKGDVFVFPIGLIHFQHNVGDGNAAAISGLNSHNSRVITIVKEVFGSDKISSEVLTKALQVDNNIVDNLQKQFWLDNN