Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68135.t1 | XP_003604065.2 | 91 | 544 | 19 | 4 | 1 | 523 | 3 | 537 | 3.80E-257 | 897.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68135.t1 | Q8GUG7 | 68.7 | 425 | 132 | 1 | 99 | 523 | 356 | 779 | 1.1e-172 | 607.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68135.t1 | G7J8K7 | 91.0 | 544 | 19 | 4 | 1 | 523 | 3 | 537 | 2.8e-257 | 897.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene68135 | 0.810931 | 9.02E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene68135 | 0.854441 | 1.23E-61 | -1.69E-46 |
| MS.gene049356 | MS.gene68135 | 0.821153 | 4.70E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene68135 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene049389 | MS.gene68135 | 0.807521 | 4.85E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene68135 | 0.84678 | 1.75E-59 | -1.69E-46 |
| MS.gene049491 | MS.gene68135 | 0.834591 | 2.74E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene68135 | 0.802471 | 5.52E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene68135 | 0.817141 | 3.85E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene68135 | 0.816284 | 5.99E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene68135 | 0.826917 | 2.09E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene68135 | 0.842903 | 1.95E-58 | -1.69E-46 |
| MS.gene050099 | MS.gene68135 | 0.82345 | 1.38E-53 | -1.69E-46 |
| MS.gene050128 | MS.gene68135 | 0.80398 | 2.69E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene68135 | 0.892238 | 1.91E-74 | -1.69E-46 |
| MS.gene050432 | MS.gene68135 | 0.827582 | 1.44E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene68135 | 0.827887 | 1.22E-54 | -1.69E-46 |
| MS.gene05053 | MS.gene68135 | 0.802884 | 4.54E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene68135 | 0.834666 | 2.63E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene68135 | 0.821646 | 3.62E-53 | -1.69E-46 |
| MS.gene050770 | MS.gene68135 | 0.825198 | 5.34E-54 | -1.69E-46 |
| MS.gene050783 | MS.gene68135 | 0.81453 | 1.47E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene68135 | 0.871099 | 8.85E-67 | -1.69E-46 |
| MS.gene05101 | MS.gene68135 | 0.848247 | 6.92E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene68135 | 0.818879 | 1.56E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene68135 | 0.822848 | 1.90E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene68135 | 0.865811 | 4.50E-65 | -1.69E-46 |
| MS.gene051582 | MS.gene68135 | 0.82734 | 1.65E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene68135 | 0.815191 | 1.05E-51 | -1.69E-46 |
| MS.gene051877 | MS.gene68135 | 0.818976 | 1.48E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene68135 | 0.852149 | 5.58E-61 | -1.69E-46 |
| MS.gene052178 | MS.gene68135 | 0.812973 | 3.24E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene68135 | 0.88777 | 1.07E-72 | -1.69E-46 |
| MS.gene052253 | MS.gene68135 | 0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene052290 | MS.gene68135 | 0.834419 | 3.03E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene68135 | 0.884745 | 1.47E-71 | -1.69E-46 |
| MS.gene052326 | MS.gene68135 | 0.861476 | 9.99E-64 | -1.69E-46 |
| MS.gene052340 | MS.gene68135 | 0.846543 | 2.03E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene68135 | 0.820522 | 6.56E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene68135 | 0.826445 | 2.70E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene68135 | 0.842023 | 3.33E-58 | -1.69E-46 |
| MS.gene053103 | MS.gene68135 | 0.827933 | 1.19E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene68135 | 0.804123 | 2.51E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene68135 | 0.823033 | 1.72E-53 | -1.69E-46 |
| MS.gene053322 | MS.gene68135 | 0.845998 | 2.86E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene68135 | 0.823351 | 1.45E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene68135 | 0.803167 | 3.97E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene68135 | 0.846517 | 2.07E-59 | -1.69E-46 |
| MS.gene054123 | MS.gene68135 | 0.886244 | 4.05E-72 | -1.69E-46 |
| MS.gene054376 | MS.gene68135 | 0.823914 | 1.07E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene68135 | 0.881118 | 3.13E-70 | -1.69E-46 |
| MS.gene054802 | MS.gene68135 | 0.856419 | 3.26E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene68135 | 0.857755 | 1.32E-62 | -1.69E-46 |
| MS.gene054804 | MS.gene68135 | 0.856399 | 3.30E-62 | -1.69E-46 |
| MS.gene054955 | MS.gene68135 | 0.820465 | 6.76E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene68135 | 0.807383 | 5.19E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene68135 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene68135 | 0.854855 | 9.32E-62 | -1.69E-46 |
| MS.gene055390 | MS.gene68135 | 0.85962 | 3.65E-63 | -1.69E-46 |
| MS.gene055397 | MS.gene68135 | 0.816765 | 4.67E-52 | -1.69E-46 |
| MS.gene055412 | MS.gene68135 | 0.842719 | 2.18E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene68135 | 0.851206 | 1.03E-60 | -1.69E-46 |
| MS.gene055428 | MS.gene68135 | 0.849779 | 2.60E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene68135 | 0.811023 | 8.61E-51 | -1.69E-46 |
| MS.gene055605 | MS.gene68135 | 0.818772 | 1.65E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene68135 | 0.805939 | 1.05E-49 | -1.69E-46 |
| MS.gene055896 | MS.gene68135 | 0.826256 | 3.00E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene68135 | 0.80849 | 3.02E-50 | -1.69E-46 |
| MS.gene055930 | MS.gene68135 | 0.837652 | 4.58E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene68135 | 0.808589 | 2.88E-50 | -1.69E-46 |
| MS.gene056314 | MS.gene68135 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene056407 | MS.gene68135 | 0.878672 | 2.32E-69 | -1.69E-46 |
| MS.gene056410 | MS.gene68135 | 0.847219 | 1.33E-59 | -1.69E-46 |
| MS.gene056511 | MS.gene68135 | 0.801742 | 7.80E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene68135 | 0.837721 | 4.40E-57 | -1.69E-46 |
| MS.gene056612 | MS.gene68135 | 0.833273 | 5.86E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene68135 | 0.810848 | 9.40E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene68135 | 0.843953 | 1.02E-58 | -1.69E-46 |
| MS.gene05702 | MS.gene68135 | 0.821848 | 3.25E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene68135 | 0.805073 | 1.59E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene68135 | 0.869205 | 3.69E-66 | -1.69E-46 |
| MS.gene057129 | MS.gene68135 | 0.828521 | 8.58E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene68135 | 0.857872 | 1.21E-62 | -1.69E-46 |
| MS.gene057295 | MS.gene68135 | 0.805567 | 1.25E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene68135 | 0.801218 | 9.99E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene68135 | 0.828578 | 8.32E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene68135 | 0.822893 | 1.86E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene68135 | 0.838938 | 2.14E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene68135 | 0.805225 | 1.48E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene68135 | 0.818506 | 1.89E-52 | -1.69E-46 |
| MS.gene057927 | MS.gene68135 | 0.811592 | 6.48E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene68135 | 0.854756 | 9.96E-62 | -1.69E-46 |
| MS.gene058019 | MS.gene68135 | 0.814507 | 1.49E-51 | -1.69E-46 |
| MS.gene058082 | MS.gene68135 | 0.808429 | 3.11E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene68135 | 0.872576 | 2.86E-67 | -1.69E-46 |
| MS.gene058233 | MS.gene68135 | 0.847758 | 9.44E-60 | -1.69E-46 |
| MS.gene058276 | MS.gene68135 | 0.810337 | 1.21E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene68135 | 0.891068 | 5.56E-74 | -1.69E-46 |
| MS.gene058365 | MS.gene68135 | 0.867829 | 1.03E-65 | -1.69E-46 |
| MS.gene05842 | MS.gene68135 | 0.808276 | 3.35E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene68135 | 0.897639 | 1.16E-76 | -1.69E-46 |
| MS.gene058700 | MS.gene68135 | 0.806987 | 6.30E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene68135 | 0.824623 | 7.30E-54 | -1.69E-46 |
| MS.gene058993 | MS.gene68135 | 0.829046 | 6.41E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene68135 | 0.88318 | 5.58E-71 | -1.69E-46 |
| MS.gene059326 | MS.gene68135 | 0.814323 | 1.63E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene68135 | 0.813762 | 2.17E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene68135 | 0.826828 | 2.19E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene68135 | 0.830518 | 2.81E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene68135 | 0.891577 | 3.50E-74 | -1.69E-46 |
| MS.gene05959 | MS.gene68135 | 0.848788 | 4.90E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene68135 | 0.896756 | 2.72E-76 | -1.69E-46 |
| MS.gene059688 | MS.gene68135 | 0.866898 | 2.04E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene68135 | 0.873737 | 1.17E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene68135 | 0.875825 | 2.27E-68 | -1.69E-46 |
| MS.gene059708 | MS.gene68135 | 0.845251 | 4.56E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene68135 | 0.834898 | 2.30E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene68135 | 0.839584 | 1.45E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene68135 | 0.862861 | 3.76E-64 | -1.69E-46 |
| MS.gene060005 | MS.gene68135 | 0.808181 | 3.51E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene68135 | 0.805543 | 1.27E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene68135 | 0.813834 | 2.09E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene68135 | 0.830147 | 3.46E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene68135 | 0.822989 | 1.76E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene68135 | 0.820835 | 5.56E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene68135 | 0.800823 | 1.20E-48 | -1.69E-46 |
| MS.gene06090 | MS.gene68135 | 0.83552 | 1.60E-56 | -1.69E-46 |
| MS.gene061041 | MS.gene68135 | 0.80442 | 2.18E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene68135 | 0.847218 | 1.33E-59 | -1.69E-46 |
| MS.gene061051 | MS.gene68135 | -0.856199 | 3.78E-62 | -1.69E-46 |
| MS.gene061200 | MS.gene68135 | 0.864225 | 1.42E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68135.t1 | MTR_3g118120 | 90.625 | 544 | 21 | 6 | 1 | 523 | 3 | 537 | 0.0 | 988 |
| MS.gene68135.t1 | MTR_6g039840 | 32.609 | 414 | 238 | 14 | 118 | 517 | 110 | 496 | 3.64e-52 | 188 |
| MS.gene68135.t1 | MTR_3g467550 | 30.079 | 379 | 240 | 10 | 116 | 490 | 115 | 472 | 1.51e-41 | 157 |
| MS.gene68135.t1 | MTR_3g467550 | 30.585 | 376 | 226 | 11 | 119 | 490 | 97 | 441 | 6.27e-41 | 155 |
| MS.gene68135.t1 | MTR_4g112340 | 28.117 | 377 | 226 | 10 | 141 | 506 | 120 | 462 | 2.33e-40 | 154 |
| MS.gene68135.t1 | MTR_2g100230 | 28.061 | 392 | 251 | 12 | 116 | 505 | 94 | 456 | 3.31e-40 | 152 |
| MS.gene68135.t1 | MTR_2g055850 | 29.032 | 403 | 232 | 15 | 111 | 498 | 84 | 447 | 2.40e-39 | 150 |
| MS.gene68135.t1 | MTR_4g114120 | 30.548 | 383 | 224 | 12 | 139 | 505 | 161 | 517 | 1.45e-38 | 150 |
| MS.gene68135.t1 | MTR_3g049990 | 28.571 | 441 | 267 | 13 | 72 | 507 | 117 | 514 | 1.74e-36 | 144 |
| MS.gene68135.t1 | MTR_4g105100 | 27.778 | 396 | 249 | 12 | 116 | 506 | 200 | 563 | 6.65e-36 | 142 |
| MS.gene68135.t1 | MTR_3g467550 | 29.859 | 355 | 225 | 10 | 116 | 467 | 115 | 448 | 1.07e-35 | 139 |
| MS.gene68135.t1 | MTR_7g109720 | 26.718 | 393 | 256 | 11 | 116 | 505 | 230 | 593 | 1.53e-35 | 141 |
| MS.gene68135.t1 | MTR_6g039840 | 30.973 | 339 | 193 | 12 | 193 | 517 | 9 | 320 | 1.80e-35 | 139 |
| MS.gene68135.t1 | MTR_2g041140 | 29.567 | 416 | 251 | 12 | 100 | 507 | 123 | 504 | 2.02e-35 | 141 |
| MS.gene68135.t1 | MTR_1g026830 | 27.273 | 385 | 243 | 12 | 116 | 491 | 145 | 501 | 4.29e-34 | 136 |
| MS.gene68135.t1 | MTR_6g005550 | 26.649 | 379 | 246 | 10 | 116 | 492 | 163 | 511 | 7.09e-34 | 136 |
| MS.gene68135.t1 | MTR_5g027840 | 28.607 | 402 | 252 | 14 | 110 | 505 | 96 | 468 | 7.46e-34 | 134 |
| MS.gene68135.t1 | MTR_1g095810 | 27.013 | 385 | 244 | 12 | 116 | 491 | 143 | 499 | 7.91e-34 | 135 |
| MS.gene68135.t1 | MTR_2g032630 | 28.117 | 377 | 239 | 12 | 118 | 492 | 496 | 842 | 3.96e-33 | 135 |
| MS.gene68135.t1 | MTR_1g054630 | 28.431 | 408 | 245 | 14 | 116 | 506 | 152 | 529 | 7.30e-33 | 132 |
| MS.gene68135.t1 | MTR_6g082080 | 26.933 | 375 | 232 | 9 | 116 | 484 | 8 | 346 | 8.03e-32 | 127 |
| MS.gene68135.t1 | MTR_7g056830 | 26.098 | 410 | 258 | 11 | 116 | 519 | 8 | 378 | 5.52e-31 | 125 |
| MS.gene68135.t1 | MTR_6g033070 | 24.868 | 378 | 255 | 9 | 118 | 493 | 140 | 490 | 6.04e-31 | 126 |
| MS.gene68135.t1 | MTR_7g076820 | 27.294 | 425 | 266 | 13 | 60 | 481 | 95 | 479 | 1.78e-30 | 125 |
| MS.gene68135.t1 | MTR_4g068990 | 29.333 | 375 | 218 | 17 | 141 | 504 | 99 | 437 | 3.72e-30 | 125 |
| MS.gene68135.t1 | MTR_7g076800 | 27.294 | 425 | 266 | 13 | 60 | 481 | 86 | 470 | 4.70e-30 | 123 |
| MS.gene68135.t1 | MTR_4g079320 | 29.201 | 363 | 222 | 11 | 140 | 499 | 41 | 371 | 5.73e-30 | 125 |
| MS.gene68135.t1 | MTR_3g083690 | 26.108 | 406 | 258 | 14 | 116 | 506 | 143 | 521 | 5.91e-30 | 124 |
| MS.gene68135.t1 | MTR_7g076830 | 28.042 | 378 | 232 | 11 | 107 | 481 | 132 | 472 | 6.00e-30 | 123 |
| MS.gene68135.t1 | MTR_7g100820 | 25.823 | 395 | 252 | 13 | 116 | 504 | 128 | 487 | 1.34e-29 | 123 |
| MS.gene68135.t1 | MTR_2g007000 | 26.371 | 383 | 247 | 11 | 116 | 493 | 502 | 854 | 1.96e-29 | 123 |
| MS.gene68135.t1 | MTR_2g066050 | 27.708 | 397 | 239 | 14 | 118 | 504 | 53 | 411 | 4.12e-29 | 120 |
| MS.gene68135.t1 | MTR_5g092560 | 27.882 | 373 | 227 | 15 | 141 | 504 | 99 | 438 | 8.01e-29 | 121 |
| MS.gene68135.t1 | MTR_6g056080 | 29.915 | 351 | 205 | 12 | 143 | 483 | 128 | 447 | 1.33e-28 | 120 |
| MS.gene68135.t1 | MTR_2g438110 | 26.014 | 419 | 271 | 10 | 92 | 504 | 2 | 387 | 1.64e-28 | 117 |
| MS.gene68135.t1 | MTR_3g071620 | 29.255 | 376 | 227 | 14 | 143 | 502 | 41 | 393 | 3.16e-28 | 119 |
| MS.gene68135.t1 | MTR_7g057250 | 26.364 | 440 | 229 | 15 | 128 | 499 | 173 | 585 | 4.38e-28 | 119 |
| MS.gene68135.t1 | MTR_3g449250 | 26.250 | 400 | 240 | 13 | 122 | 508 | 94 | 451 | 7.44e-28 | 117 |
| MS.gene68135.t1 | MTR_3g449250 | 25.628 | 398 | 245 | 11 | 122 | 508 | 94 | 451 | 1.20e-27 | 117 |
| MS.gene68135.t1 | MTR_5g090120 | 26.463 | 393 | 248 | 13 | 122 | 508 | 85 | 442 | 1.58e-27 | 117 |
| MS.gene68135.t1 | MTR_1g083130 | 25.791 | 411 | 232 | 13 | 117 | 482 | 25 | 407 | 1.63e-27 | 117 |
| MS.gene68135.t1 | MTR_4g112320 | 25.796 | 314 | 188 | 9 | 203 | 506 | 2 | 280 | 2.35e-27 | 114 |
| MS.gene68135.t1 | MTR_4g105100 | 27.195 | 353 | 221 | 11 | 116 | 463 | 200 | 521 | 2.07e-26 | 113 |
| MS.gene68135.t1 | MTR_3g107420 | 26.238 | 404 | 242 | 12 | 103 | 491 | 30 | 392 | 3.45e-25 | 108 |
| MS.gene68135.t1 | MTR_1g012420 | 26.055 | 403 | 244 | 11 | 103 | 491 | 30 | 392 | 3.68e-25 | 108 |
| MS.gene68135.t1 | MTR_4g125970 | 27.083 | 384 | 231 | 11 | 118 | 493 | 41 | 383 | 3.91e-25 | 107 |
| MS.gene68135.t1 | MTR_2g039960 | 27.461 | 386 | 227 | 12 | 118 | 493 | 41 | 383 | 6.33e-25 | 107 |
| MS.gene68135.t1 | MTR_4g125970 | 27.083 | 384 | 231 | 11 | 118 | 493 | 58 | 400 | 7.06e-25 | 107 |
| MS.gene68135.t1 | MTR_4g010565 | 27.638 | 398 | 232 | 12 | 119 | 502 | 125 | 480 | 7.07e-25 | 108 |
| MS.gene68135.t1 | MTR_8g027775 | 24.524 | 473 | 302 | 16 | 33 | 487 | 24 | 459 | 7.78e-25 | 108 |
| MS.gene68135.t1 | MTR_4g059460 | 27.033 | 455 | 252 | 19 | 101 | 491 | 27 | 465 | 9.13e-25 | 108 |
| MS.gene68135.t1 | MTR_2g099620 | 27.013 | 385 | 232 | 12 | 117 | 493 | 24 | 367 | 1.02e-24 | 106 |
| MS.gene68135.t1 | MTR_2g099620 | 27.013 | 385 | 232 | 12 | 117 | 493 | 40 | 383 | 1.28e-24 | 106 |
| MS.gene68135.t1 | MTR_1g102410 | 27.473 | 364 | 213 | 10 | 143 | 483 | 69 | 404 | 4.33e-24 | 106 |
| MS.gene68135.t1 | MTR_8g018400 | 26.343 | 391 | 239 | 12 | 118 | 500 | 41 | 390 | 9.27e-24 | 103 |
| MS.gene68135.t1 | MTR_4g134170 | 24.873 | 394 | 253 | 15 | 116 | 491 | 285 | 653 | 6.27e-23 | 103 |
| MS.gene68135.t1 | MTR_8g027770 | 25.505 | 396 | 261 | 15 | 103 | 487 | 186 | 558 | 4.12e-21 | 97.4 |
| MS.gene68135.t1 | MTR_6g005320 | 24.352 | 386 | 248 | 13 | 116 | 484 | 247 | 605 | 5.61e-21 | 97.1 |
| MS.gene68135.t1 | MTR_2g063080 | 24.344 | 419 | 271 | 11 | 103 | 484 | 93 | 502 | 9.34e-19 | 89.7 |
| MS.gene68135.t1 | MTR_4g131750 | 23.821 | 403 | 244 | 11 | 109 | 481 | 73 | 442 | 2.73e-18 | 88.2 |
| MS.gene68135.t1 | MTR_6g040070 | 30.726 | 179 | 114 | 3 | 119 | 296 | 579 | 748 | 5.29e-18 | 87.8 |
| MS.gene68135.t1 | MTR_0915s0010 | 32.584 | 178 | 108 | 3 | 139 | 316 | 10 | 175 | 6.68e-18 | 84.3 |
| MS.gene68135.t1 | MTR_8g062720 | 32.432 | 185 | 109 | 6 | 304 | 484 | 358 | 530 | 1.23e-16 | 83.2 |
| MS.gene68135.t1 | MTR_8g062720 | 30.412 | 194 | 110 | 8 | 108 | 283 | 75 | 261 | 3.50e-13 | 72.4 |
| MS.gene68135.t1 | MTR_4g077370 | 30.542 | 203 | 124 | 6 | 118 | 316 | 250 | 439 | 1.79e-16 | 82.4 |
| MS.gene68135.t1 | MTR_5g069330 | 22.359 | 407 | 277 | 14 | 116 | 518 | 5 | 376 | 4.17e-15 | 77.8 |
| MS.gene68135.t1 | MTR_5g069330 | 22.359 | 407 | 277 | 14 | 116 | 518 | 1 | 372 | 4.67e-15 | 77.8 |
| MS.gene68135.t1 | MTR_4g459350 | 29.353 | 201 | 131 | 6 | 101 | 297 | 24 | 217 | 5.54e-15 | 75.9 |
| MS.gene68135.t1 | MTR_1g061970 | 24.089 | 494 | 285 | 21 | 33 | 497 | 21 | 453 | 1.55e-14 | 76.3 |
| MS.gene68135.t1 | MTR_4g068990 | 28.033 | 239 | 147 | 9 | 269 | 504 | 10 | 226 | 1.64e-14 | 76.6 |
| MS.gene68135.t1 | MTR_8g032230 | 28.144 | 167 | 103 | 3 | 116 | 282 | 8 | 157 | 1.04e-13 | 69.7 |
| MS.gene68135.t1 | MTR_2g043360 | 30.978 | 184 | 113 | 6 | 111 | 286 | 34 | 211 | 1.78e-13 | 73.6 |
| MS.gene68135.t1 | MTR_5g092560 | 27.917 | 240 | 147 | 10 | 269 | 504 | 10 | 227 | 5.33e-13 | 71.6 |
| MS.gene68135.t1 | MTR_4g049910 | 23.134 | 402 | 245 | 15 | 113 | 493 | 50 | 408 | 1.87e-12 | 69.7 |
| MS.gene68135.t1 | MTR_3g107420 | 26.147 | 218 | 146 | 5 | 103 | 316 | 30 | 236 | 8.73e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68135.t1 | AT3G06980 | 66.297 | 451 | 135 | 3 | 88 | 523 | 331 | 779 | 0.0 | 634 |
| MS.gene68135.t1 | AT4G09730 | 31.250 | 416 | 245 | 12 | 116 | 517 | 111 | 499 | 1.11e-55 | 197 |
| MS.gene68135.t1 | AT1G55150 | 30.628 | 382 | 232 | 13 | 116 | 493 | 98 | 450 | 3.67e-43 | 160 |
| MS.gene68135.t1 | AT1G55150 | 30.628 | 382 | 232 | 13 | 116 | 493 | 123 | 475 | 9.67e-43 | 160 |
| MS.gene68135.t1 | AT5G63120 | 29.114 | 395 | 245 | 12 | 116 | 506 | 164 | 527 | 2.48e-39 | 151 |
| MS.gene68135.t1 | AT5G14610 | 28.534 | 382 | 235 | 13 | 116 | 492 | 160 | 508 | 4.62e-38 | 148 |
| MS.gene68135.t1 | AT5G14610 | 28.534 | 382 | 235 | 13 | 116 | 492 | 168 | 516 | 4.64e-38 | 148 |
| MS.gene68135.t1 | AT5G14610 | 28.534 | 382 | 235 | 13 | 116 | 492 | 160 | 508 | 4.72e-38 | 148 |
| MS.gene68135.t1 | AT5G14610 | 28.533 | 375 | 227 | 14 | 123 | 492 | 39 | 377 | 3.28e-36 | 141 |
| MS.gene68135.t1 | AT5G14610 | 28.533 | 375 | 227 | 14 | 123 | 492 | 39 | 377 | 3.28e-36 | 141 |
| MS.gene68135.t1 | AT3G01540 | 28.158 | 380 | 239 | 12 | 116 | 492 | 157 | 505 | 7.33e-36 | 141 |
| MS.gene68135.t1 | AT3G01540 | 28.158 | 380 | 239 | 12 | 116 | 492 | 157 | 505 | 7.33e-36 | 141 |
| MS.gene68135.t1 | AT3G01540 | 28.158 | 380 | 239 | 12 | 116 | 492 | 157 | 505 | 7.33e-36 | 141 |
| MS.gene68135.t1 | AT3G01540 | 28.158 | 380 | 239 | 12 | 116 | 492 | 157 | 505 | 7.42e-36 | 141 |
| MS.gene68135.t1 | AT5G14610 | 28.689 | 366 | 223 | 13 | 132 | 492 | 244 | 576 | 3.15e-35 | 140 |
| MS.gene68135.t1 | AT1G31970 | 29.397 | 398 | 247 | 14 | 109 | 499 | 108 | 478 | 3.62e-35 | 139 |
| MS.gene68135.t1 | AT2G47330 | 26.582 | 395 | 254 | 11 | 116 | 505 | 227 | 590 | 3.81e-35 | 140 |
| MS.gene68135.t1 | AT5G51280 | 26.893 | 383 | 247 | 11 | 116 | 491 | 145 | 501 | 6.20e-35 | 139 |
| MS.gene68135.t1 | AT5G65900 | 27.027 | 407 | 242 | 13 | 111 | 502 | 148 | 514 | 4.04e-34 | 136 |
| MS.gene68135.t1 | AT5G60990 | 27.540 | 374 | 241 | 10 | 116 | 484 | 8 | 356 | 1.35e-33 | 133 |
| MS.gene68135.t1 | AT4G33370 | 26.632 | 383 | 248 | 11 | 116 | 491 | 96 | 452 | 3.08e-33 | 133 |
| MS.gene68135.t1 | AT2G42520 | 28.501 | 407 | 246 | 14 | 116 | 506 | 158 | 535 | 3.97e-33 | 134 |
| MS.gene68135.t1 | AT2G42520 | 28.501 | 407 | 246 | 14 | 116 | 506 | 158 | 535 | 3.97e-33 | 134 |
| MS.gene68135.t1 | AT2G42520 | 28.501 | 407 | 246 | 14 | 116 | 506 | 158 | 535 | 3.97e-33 | 134 |
| MS.gene68135.t1 | AT5G26742 | 28.954 | 373 | 231 | 11 | 130 | 497 | 115 | 458 | 1.34e-32 | 132 |
| MS.gene68135.t1 | AT5G26742 | 28.954 | 373 | 231 | 11 | 130 | 497 | 115 | 458 | 1.34e-32 | 132 |
| MS.gene68135.t1 | AT3G06480 | 27.481 | 393 | 252 | 12 | 118 | 506 | 436 | 799 | 3.07e-32 | 132 |
| MS.gene68135.t1 | AT1G16280 | 26.847 | 406 | 253 | 13 | 108 | 506 | 51 | 419 | 5.29e-32 | 129 |
| MS.gene68135.t1 | AT4G00660 | 28.042 | 378 | 232 | 11 | 107 | 481 | 121 | 461 | 6.91e-32 | 129 |
| MS.gene68135.t1 | AT4G00660 | 28.042 | 378 | 232 | 11 | 107 | 481 | 121 | 461 | 6.91e-32 | 129 |
| MS.gene68135.t1 | AT3G61240 | 28.042 | 378 | 232 | 10 | 107 | 481 | 114 | 454 | 8.39e-32 | 128 |
| MS.gene68135.t1 | AT3G61240 | 28.042 | 378 | 232 | 10 | 107 | 481 | 114 | 454 | 8.39e-32 | 128 |
| MS.gene68135.t1 | AT3G58510 | 28.155 | 412 | 251 | 14 | 116 | 510 | 150 | 533 | 9.42e-32 | 129 |
| MS.gene68135.t1 | AT3G58510 | 28.155 | 412 | 251 | 14 | 116 | 510 | 150 | 533 | 9.42e-32 | 129 |
| MS.gene68135.t1 | AT3G58510 | 28.155 | 412 | 251 | 14 | 116 | 510 | 150 | 533 | 9.42e-32 | 129 |
| MS.gene68135.t1 | AT3G58570 | 27.764 | 407 | 249 | 14 | 116 | 506 | 145 | 522 | 1.98e-31 | 129 |
| MS.gene68135.t1 | AT1G51380 | 26.720 | 378 | 244 | 10 | 116 | 493 | 21 | 365 | 2.00e-31 | 125 |
| MS.gene68135.t1 | AT5G26742 | 29.805 | 359 | 221 | 13 | 142 | 497 | 35 | 365 | 2.02e-31 | 129 |
| MS.gene68135.t1 | AT2G45810 | 28.087 | 413 | 247 | 12 | 80 | 481 | 111 | 484 | 2.16e-31 | 127 |
| MS.gene68135.t1 | AT3G18600 | 27.688 | 372 | 215 | 13 | 141 | 498 | 113 | 444 | 2.84e-31 | 127 |
| MS.gene68135.t1 | AT1G20920 | 26.562 | 384 | 245 | 12 | 116 | 493 | 190 | 542 | 3.77e-31 | 128 |
| MS.gene68135.t1 | AT1G20920 | 26.562 | 384 | 245 | 12 | 116 | 493 | 528 | 880 | 9.03e-31 | 127 |
| MS.gene68135.t1 | AT1G20920 | 26.562 | 384 | 245 | 12 | 116 | 493 | 528 | 880 | 9.03e-31 | 127 |
| MS.gene68135.t1 | AT1G20920 | 26.562 | 384 | 245 | 12 | 116 | 493 | 528 | 880 | 9.03e-31 | 127 |
| MS.gene68135.t1 | AT1G20920 | 26.562 | 384 | 245 | 12 | 116 | 493 | 528 | 880 | 9.03e-31 | 127 |
| MS.gene68135.t1 | AT1G20920 | 26.562 | 384 | 245 | 12 | 116 | 493 | 528 | 880 | 9.03e-31 | 127 |
| MS.gene68135.t1 | AT1G20920 | 26.562 | 384 | 245 | 12 | 116 | 493 | 528 | 880 | 9.03e-31 | 127 |
| MS.gene68135.t1 | AT1G71370 | 28.392 | 398 | 220 | 14 | 128 | 502 | 27 | 382 | 2.69e-30 | 125 |
| MS.gene68135.t1 | AT5G14610 | 27.221 | 349 | 217 | 12 | 116 | 459 | 168 | 484 | 6.25e-30 | 123 |
| MS.gene68135.t1 | AT3G09720 | 26.835 | 395 | 248 | 13 | 116 | 504 | 136 | 495 | 1.21e-29 | 122 |
| MS.gene68135.t1 | AT3G09720 | 26.835 | 395 | 248 | 13 | 116 | 504 | 136 | 495 | 1.21e-29 | 122 |
| MS.gene68135.t1 | AT1G77030 | 28.571 | 357 | 220 | 10 | 140 | 493 | 51 | 375 | 1.68e-29 | 123 |
| MS.gene68135.t1 | AT5G63120 | 29.032 | 341 | 208 | 11 | 116 | 452 | 164 | 474 | 1.76e-29 | 121 |
| MS.gene68135.t1 | AT5G63120 | 29.032 | 341 | 208 | 11 | 116 | 452 | 164 | 474 | 2.01e-29 | 121 |
| MS.gene68135.t1 | AT5G63120 | 29.032 | 341 | 208 | 11 | 116 | 452 | 164 | 474 | 2.01e-29 | 121 |
| MS.gene68135.t1 | AT5G63120 | 29.032 | 341 | 208 | 11 | 116 | 452 | 164 | 474 | 2.01e-29 | 121 |
| MS.gene68135.t1 | AT5G54910 | 26.961 | 408 | 249 | 15 | 111 | 506 | 65 | 435 | 2.31e-29 | 123 |
| MS.gene68135.t1 | AT3G22330 | 25.490 | 408 | 262 | 12 | 118 | 519 | 105 | 476 | 3.38e-29 | 122 |
| MS.gene68135.t1 | AT4G16630 | 28.133 | 391 | 246 | 12 | 114 | 500 | 164 | 523 | 6.23e-29 | 122 |
| MS.gene68135.t1 | AT3G02065 | 27.865 | 384 | 237 | 13 | 118 | 493 | 111 | 462 | 2.45e-28 | 118 |
| MS.gene68135.t1 | AT3G02065 | 27.865 | 384 | 237 | 13 | 118 | 493 | 111 | 462 | 2.45e-28 | 118 |
| MS.gene68135.t1 | AT3G19760 | 25.964 | 389 | 255 | 9 | 116 | 504 | 34 | 389 | 3.73e-28 | 116 |
| MS.gene68135.t1 | AT3G22310 | 25.000 | 408 | 264 | 12 | 118 | 519 | 117 | 488 | 6.74e-28 | 118 |
| MS.gene68135.t1 | AT3G22310 | 25.000 | 408 | 264 | 12 | 118 | 519 | 117 | 488 | 7.20e-28 | 118 |
| MS.gene68135.t1 | AT5G05450 | 27.041 | 392 | 232 | 14 | 128 | 497 | 27 | 386 | 7.38e-28 | 117 |
| MS.gene68135.t1 | AT3G09620 | 25.926 | 378 | 220 | 13 | 119 | 493 | 398 | 718 | 2.67e-27 | 117 |
| MS.gene68135.t1 | AT3G09620 | 25.926 | 378 | 220 | 13 | 119 | 493 | 399 | 719 | 2.74e-27 | 117 |
| MS.gene68135.t1 | AT3G02065 | 28.969 | 359 | 213 | 14 | 143 | 493 | 1 | 325 | 4.66e-27 | 112 |
| MS.gene68135.t1 | AT2G33730 | 24.318 | 440 | 284 | 14 | 99 | 508 | 279 | 699 | 1.13e-25 | 111 |
| MS.gene68135.t1 | AT4G34910 | 24.634 | 410 | 240 | 11 | 117 | 482 | 46 | 430 | 8.45e-25 | 108 |
| MS.gene68135.t1 | AT3G06480 | 25.648 | 347 | 229 | 10 | 118 | 463 | 436 | 754 | 2.60e-24 | 107 |
| MS.gene68135.t1 | AT3G13920 | 27.083 | 384 | 233 | 10 | 117 | 493 | 29 | 372 | 2.66e-24 | 105 |
| MS.gene68135.t1 | AT3G13920 | 27.083 | 384 | 233 | 10 | 117 | 493 | 39 | 382 | 3.09e-24 | 105 |
| MS.gene68135.t1 | AT5G11170 | 25.862 | 406 | 243 | 13 | 102 | 491 | 29 | 392 | 3.24e-24 | 105 |
| MS.gene68135.t1 | AT5G11200 | 25.862 | 406 | 243 | 13 | 102 | 491 | 29 | 392 | 3.24e-24 | 105 |
| MS.gene68135.t1 | AT3G13920 | 27.083 | 384 | 233 | 10 | 117 | 493 | 39 | 382 | 3.41e-24 | 105 |
| MS.gene68135.t1 | AT3G13920 | 27.083 | 384 | 233 | 10 | 117 | 493 | 43 | 386 | 3.73e-24 | 105 |
| MS.gene68135.t1 | AT1G54270 | 25.995 | 377 | 246 | 8 | 117 | 493 | 39 | 382 | 7.12e-24 | 104 |
| MS.gene68135.t1 | AT3G16840 | 26.406 | 409 | 236 | 13 | 127 | 482 | 201 | 597 | 1.54e-23 | 105 |
| MS.gene68135.t1 | AT2G07750 | 25.679 | 405 | 254 | 15 | 107 | 494 | 365 | 739 | 1.80e-23 | 105 |
| MS.gene68135.t1 | AT3G16840 | 26.406 | 409 | 236 | 13 | 127 | 482 | 200 | 596 | 1.84e-23 | 105 |
| MS.gene68135.t1 | AT1G28180 | 28.451 | 355 | 213 | 13 | 163 | 508 | 19 | 341 | 1.95e-23 | 102 |
| MS.gene68135.t1 | AT2G40700 | 25.785 | 446 | 251 | 21 | 111 | 491 | 24 | 454 | 7.87e-23 | 102 |
| MS.gene68135.t1 | AT5G62190 | 26.374 | 364 | 201 | 9 | 143 | 483 | 122 | 441 | 1.58e-22 | 102 |
| MS.gene68135.t1 | AT5G08610 | 26.289 | 388 | 233 | 16 | 114 | 487 | 392 | 740 | 2.90e-22 | 101 |
| MS.gene68135.t1 | AT1G72730 | 26.471 | 374 | 226 | 11 | 128 | 493 | 52 | 384 | 3.64e-22 | 99.4 |
| MS.gene68135.t1 | AT3G13920 | 27.083 | 384 | 228 | 11 | 117 | 493 | 39 | 377 | 5.88e-22 | 98.6 |
| MS.gene68135.t1 | AT1G12770 | 23.342 | 407 | 268 | 9 | 113 | 484 | 106 | 503 | 8.17e-22 | 99.4 |
| MS.gene68135.t1 | AT1G12770 | 23.342 | 407 | 268 | 9 | 113 | 484 | 106 | 503 | 8.17e-22 | 99.4 |
| MS.gene68135.t1 | AT1G54270 | 25.995 | 377 | 241 | 9 | 117 | 493 | 39 | 377 | 1.18e-21 | 97.8 |
| MS.gene68135.t1 | AT5G11200 | 24.601 | 439 | 248 | 15 | 102 | 491 | 29 | 433 | 1.80e-21 | 97.8 |
| MS.gene68135.t1 | AT1G63250 | 25.000 | 404 | 258 | 15 | 107 | 494 | 318 | 692 | 2.47e-21 | 98.6 |
| MS.gene68135.t1 | AT5G11170 | 27.326 | 344 | 194 | 12 | 162 | 491 | 8 | 309 | 1.37e-20 | 93.6 |
| MS.gene68135.t1 | AT5G63630 | 25.320 | 391 | 233 | 13 | 114 | 487 | 64 | 412 | 3.00e-20 | 94.4 |
| MS.gene68135.t1 | AT5G19210 | 26.131 | 398 | 246 | 15 | 105 | 481 | 64 | 434 | 3.58e-20 | 94.0 |
| MS.gene68135.t1 | AT5G63630 | 25.063 | 395 | 229 | 15 | 114 | 487 | 258 | 606 | 3.78e-20 | 94.7 |
| MS.gene68135.t1 | AT5G08620 | 24.422 | 389 | 256 | 12 | 112 | 487 | 75 | 438 | 1.73e-19 | 92.0 |
| MS.gene68135.t1 | AT1G51380 | 24.632 | 272 | 182 | 5 | 116 | 387 | 21 | 269 | 7.92e-19 | 87.0 |
| MS.gene68135.t1 | AT1G51380 | 28.293 | 205 | 127 | 4 | 116 | 316 | 21 | 209 | 5.83e-17 | 82.0 |
| MS.gene68135.t1 | AT1G51380 | 28.293 | 205 | 127 | 4 | 116 | 316 | 21 | 209 | 6.95e-17 | 82.0 |
| MS.gene68135.t1 | AT3G53110 | 23.866 | 419 | 269 | 13 | 108 | 510 | 82 | 466 | 2.98e-16 | 82.0 |
| MS.gene68135.t1 | AT1G59990 | 27.778 | 216 | 132 | 6 | 304 | 515 | 354 | 549 | 9.58e-15 | 77.4 |
| MS.gene68135.t1 | AT1G59990 | 27.778 | 216 | 132 | 6 | 304 | 515 | 354 | 549 | 1.02e-14 | 77.4 |
| MS.gene68135.t1 | AT5G11200 | 26.160 | 237 | 155 | 7 | 102 | 330 | 29 | 253 | 7.66e-12 | 68.2 |
Find 108 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGAAGTGTCCCAGTTTA+TGG | 0.122594 | 3.1:+92855308 | MS.gene68135:CDS |
| ATTGCTGACCAGAGTGGTTC+TGG | 0.306260 | 3.1:+92853381 | MS.gene68135:CDS |
| GCCCTGTCCCCTGGCACCTC+TGG | 0.308184 | 3.1:-92855579 | None:intergenic |
| TAGACATTGAACGACAATTA+TGG | 0.323737 | 3.1:-92853539 | None:intergenic |
| TGTCTGTGCAAACCATAAAC+TGG | 0.324559 | 3.1:-92855320 | None:intergenic |
| ATAAACTGGGACACTTCTTT+TGG | 0.327753 | 3.1:-92855306 | None:intergenic |
| TTGCAGAACACAATAGTTCT+TGG | 0.346234 | 3.1:-92855041 | None:intergenic |
| TCATTTGCTCCTGTTATTGC+CGG | 0.349281 | 3.1:+92853345 | MS.gene68135:CDS |
| GATGAGGTTGATATCCTCTT+TGG | 0.353589 | 3.1:+92853892 | MS.gene68135:CDS |
| GGCGAGTTAAAGAGAGGTTA+TGG | 0.368794 | 3.1:-92853302 | None:intergenic |
| CAAGACTTTCCGGCAATAAC+AGG | 0.372706 | 3.1:-92853354 | None:intergenic |
| AGCAATTATACAAGACTTTC+CGG | 0.389114 | 3.1:-92853364 | None:intergenic |
| AGCCAGAGGTGCCAGGGGAC+AGG | 0.398550 | 3.1:+92855577 | MS.gene68135:CDS |
| GAAGAAGACAGAGTGTTTAC+TGG | 0.408498 | 3.1:-92852974 | None:intergenic |
| CACAGCTGAGTTAGCTTCTC+AGG | 0.409704 | 3.1:+92853512 | MS.gene68135:CDS |
| GTCGATAAAACCACGAGTTT+CGG | 0.415741 | 3.1:+92853039 | MS.gene68135:CDS |
| TGTCGTTCAATGTCTAAATC+TGG | 0.417609 | 3.1:+92853546 | MS.gene68135:CDS |
| GAGTTGGATGGGGAGACAAT+AGG | 0.426703 | 3.1:+92853193 | MS.gene68135:CDS |
| AAGGCATTTATCTTTGTTGT+TGG | 0.426934 | 3.1:+92855602 | MS.gene68135:CDS |
| TGCAGAACACAATAGTTCTT+GGG | 0.438418 | 3.1:-92855040 | None:intergenic |
| CCCATGACCATTTCACAATC+AGG | 0.439831 | 3.1:-92854036 | None:intergenic |
| TCCACTGCATGATGTACCTT+CGG | 0.449294 | 3.1:+92855676 | MS.gene68135:CDS |
| GAGAGATTCAATCATGAAAT+CGG | 0.449692 | 3.1:-92853280 | None:intergenic |
| AGTTGGATGGGGAGACAATA+GGG | 0.452318 | 3.1:+92853194 | MS.gene68135:CDS |
| GAAGAACAGCCAGAGGTGCC+AGG | 0.461221 | 3.1:+92855570 | MS.gene68135:CDS |
| CTAAAATCATTTAAAGACAT+TGG | 0.461700 | 3.1:+92853252 | MS.gene68135:CDS |
| AGTGAAACCTGACCTCTTCA+AGG | 0.469671 | 3.1:-92854086 | None:intergenic |
| AACTCGCCCTTCCAACATAC+AGG | 0.470926 | 3.1:+92853317 | MS.gene68135:CDS |
| AACTCATTCGAGAGTTGGAT+GGG | 0.471462 | 3.1:+92853182 | MS.gene68135:CDS |
| AAATGCCTTGCCCTGTCCCC+TGG | 0.473330 | 3.1:-92855588 | None:intergenic |
| TGTCTGAGACGTTGAATGAT+TGG | 0.476607 | 3.1:-92853426 | None:intergenic |
| AACTTGTAACAGAGCTTCGC+GGG | 0.488229 | 3.1:+92855469 | MS.gene68135:intron |
| AGGTGCCAGGGGACAGGGCA+AGG | 0.488567 | 3.1:+92855583 | MS.gene68135:CDS |
| AGTTTATGGTTTGCACAGAC+AGG | 0.493541 | 3.1:+92855322 | MS.gene68135:CDS |
| GAATTCCCTTTCTATCAAAA+CGG | 0.499892 | 3.1:-92855203 | None:intergenic |
| GCCAGAGGTGCCAGGGGACA+GGG | 0.502782 | 3.1:+92855578 | MS.gene68135:CDS |
| ATTATGTTGCAGTGCTGTCT+TGG | 0.503149 | 3.1:+92853870 | MS.gene68135:intron |
| TTGCTGTTTAGCATCGGAGT+TGG | 0.503766 | 3.1:+92852943 | MS.gene68135:CDS |
| TCCTGATTGTGAAATGGTCA+TGG | 0.506213 | 3.1:+92854035 | MS.gene68135:CDS |
| GTAGATTGTAGTGGGGAAGA+TGG | 0.506554 | 3.1:+92854942 | MS.gene68135:CDS |
| AGCTGCTCTTCTGCAGCTTG+CGG | 0.507830 | 3.1:+92855004 | MS.gene68135:CDS |
| TGGCGATGAGGACTTCGAAA+AGG | 0.514933 | 3.1:+92853912 | MS.gene68135:CDS |
| AGATAATAGTAGATTGTAGT+GGG | 0.515530 | 3.1:+92854934 | MS.gene68135:intron |
| ATGCTTGATTAGTTCTTCAC+CGG | 0.515910 | 3.1:+92853942 | MS.gene68135:CDS |
| CAACTCATTCGAGAGTTGGA+TGG | 0.516133 | 3.1:+92853181 | MS.gene68135:CDS |
| GGTTGATGAGGAAGAGAAAA+CGG | 0.523534 | 3.1:-92853671 | None:intergenic |
| ACTGCAACTCATTCGAGAGT+TGG | 0.528094 | 3.1:+92853177 | MS.gene68135:CDS |
| CAATAGGGTTAGCAGTCAAT+CGG | 0.532781 | 3.1:+92853209 | MS.gene68135:CDS |
| AGTGAATATGTACGGCGTGT+TGG | 0.534281 | 3.1:+92855548 | MS.gene68135:CDS |
| CCTGATTGTGAAATGGTCAT+GGG | 0.535391 | 3.1:+92854036 | MS.gene68135:CDS |
| GTGACAAGCATAGATTTGAA+TGG | 0.537448 | 3.1:-92853576 | None:intergenic |
| AAATCTATGCTTGTCACTGG+TGG | 0.541886 | 3.1:+92853582 | MS.gene68135:CDS |
| TTGCAGTGCTGTCTTGGATG+AGG | 0.552233 | 3.1:+92853876 | MS.gene68135:intron |
| GTCTGTGCAAACCATAAACT+GGG | 0.552773 | 3.1:-92855319 | None:intergenic |
| CGAAGTCCTCATCGCCAAAG+AGG | 0.554253 | 3.1:-92853906 | None:intergenic |
| CAGATAATAGTAGATTGTAG+TGG | 0.557322 | 3.1:+92854933 | MS.gene68135:intron |
| ATCACGGCTTGCTAGTATGA+AGG | 0.558273 | 3.1:+92855266 | MS.gene68135:CDS |
| TTCAAATCTATGCTTGTCAC+TGG | 0.558308 | 3.1:+92853579 | MS.gene68135:CDS |
| GTGGTTGCGCAAGGTGTTTG+TGG | 0.559691 | 3.1:+92852913 | MS.gene68135:CDS |
| TGGAAGGGCGAGTTAAAGAG+AGG | 0.560834 | 3.1:-92853308 | None:intergenic |
| AAATGACATGGCCTGTATGT+TGG | 0.565806 | 3.1:-92853328 | None:intergenic |
| AGTAATGGAAAGAAATCGGA+AGG | 0.566217 | 3.1:+92855649 | MS.gene68135:CDS |
| AAGAACAGCCAGAGGTGCCA+GGG | 0.570215 | 3.1:+92855571 | MS.gene68135:CDS |
| GAACTTATTCGATGCATACT+AGG | 0.571644 | 3.1:-92854060 | None:intergenic |
| AATAAATATTGTGTGTCCAC+CGG | 0.571880 | 3.1:-92853961 | None:intergenic |
| CAACTTGTAACAGAGCTTCG+CGG | 0.572338 | 3.1:+92855468 | MS.gene68135:intron |
| CTTGATTAGTTCTTCACCGG+TGG | 0.581413 | 3.1:+92853945 | MS.gene68135:CDS |
| AAAGCGTTGCTGTTTAGCAT+CGG | 0.582268 | 3.1:+92852937 | MS.gene68135:CDS |
| TGTGTCATGGCAGCATGGAA+AGG | 0.582945 | 3.1:-92855240 | None:intergenic |
| GGTGCGAGTATAACAAGAGT+AGG | 0.587052 | 3.1:-92853489 | None:intergenic |
| CTCAGACAACAAGAACTACA+AGG | 0.588339 | 3.1:+92853441 | MS.gene68135:CDS |
| TGATATCCTCTTTGGCGATG+AGG | 0.588829 | 3.1:+92853900 | MS.gene68135:CDS |
| TGCACTTAACTAATCTAACA+TGG | 0.590356 | 3.1:+92853703 | MS.gene68135:CDS |
| ATGTCTTTCCAGAACCACTC+TGG | 0.590455 | 3.1:-92853389 | None:intergenic |
| AATAAGTTCTCGCCTTGAAG+AGG | 0.590513 | 3.1:+92854074 | MS.gene68135:CDS |
| CTGAGAAGCTAACTCAGCTG+TGG | 0.591686 | 3.1:-92853511 | None:intergenic |
| TTTCTCTTCCTCATCAACCA+AGG | 0.592789 | 3.1:+92853675 | MS.gene68135:CDS |
| AAGCCGTGATTCTTGTGTCA+TGG | 0.593997 | 3.1:-92855253 | None:intergenic |
| ACACGCCGTACATATTCACT+TGG | 0.594509 | 3.1:-92855545 | None:intergenic |
| GGGAATTGACTTCACTAGAG+TGG | 0.597817 | 3.1:+92855490 | MS.gene68135:CDS |
| TCAACTCGACACTTTAAACC+AGG | 0.598198 | 3.1:+92853620 | MS.gene68135:CDS |
| AAGAAGACAGAGTGTTTACT+GGG | 0.599621 | 3.1:-92852973 | None:intergenic |
| ACATATTCACTTGGATCACG+TGG | 0.605024 | 3.1:-92855536 | None:intergenic |
| GTGATCCAAGTGAATATGTA+CGG | 0.607674 | 3.1:+92855540 | MS.gene68135:CDS |
| TTCAATGTCTAAATCTGGCA+AGG | 0.610738 | 3.1:+92853551 | MS.gene68135:CDS |
| ATGAGGAAGAGAAAACGGCC+AGG | 0.612771 | 3.1:-92853666 | None:intergenic |
| TGAGAAGCTAACTCAGCTGT+GGG | 0.613832 | 3.1:-92853510 | None:intergenic |
| AAAATGGCGGTGGTTGCGCA+AGG | 0.615353 | 3.1:+92852904 | None:intergenic |
| GAAGAGAATCAAAATGGCGG+TGG | 0.615716 | 3.1:+92852894 | None:intergenic |
| GACATGGCCTGTATGTTGGA+AGG | 0.625996 | 3.1:-92853324 | None:intergenic |
| CTGCCATGACACAAGAATCA+CGG | 0.635761 | 3.1:+92855250 | MS.gene68135:CDS |
| GATAATAGTAGATTGTAGTG+GGG | 0.637024 | 3.1:+92854935 | MS.gene68135:intron |
| AGAACAGCCAGAGGTGCCAG+GGG | 0.638006 | 3.1:+92855572 | MS.gene68135:CDS |
| GCCGAAGGTACATCATGCAG+TGG | 0.640301 | 3.1:-92855677 | None:intergenic |
| TGTATAATTGCTGACCAGAG+TGG | 0.648838 | 3.1:+92853375 | MS.gene68135:CDS |
| TCTCAATACTCATAAGCCGA+AGG | 0.655130 | 3.1:-92855692 | None:intergenic |
| ACATGGCCTGTATGTTGGAA+GGG | 0.662222 | 3.1:-92853323 | None:intergenic |
| TAGGGTTAGCAGTCAATCGG+AGG | 0.663524 | 3.1:+92853212 | MS.gene68135:CDS |
| ATTCTTGTGTCATGGCAGCA+TGG | 0.663708 | 3.1:-92855245 | None:intergenic |
| ACTCATTCGAGAGTTGGATG+GGG | 0.667637 | 3.1:+92853183 | MS.gene68135:CDS |
| CGTGTTGGAAGAACAGCCAG+AGG | 0.669248 | 3.1:+92855563 | MS.gene68135:CDS |
| GATGTCTTGATAGCTACACC+TGG | 0.674489 | 3.1:+92853648 | MS.gene68135:CDS |
| CAACTCGACACTTTAAACCA+GGG | 0.695695 | 3.1:+92853621 | MS.gene68135:CDS |
| GTAATGGAAAGAAATCGGAA+GGG | 0.700702 | 3.1:+92855650 | MS.gene68135:CDS |
| AATAACAGGAGCAAATGACA+TGG | 0.700797 | 3.1:-92853340 | None:intergenic |
| ACTTGTAACAGAGCTTCGCG+GGG | 0.711965 | 3.1:+92855470 | MS.gene68135:intron |
| CATATTCACTTGGATCACGT+GGG | 0.715544 | 3.1:-92855535 | None:intergenic |
| CTATCAAGACATCAACACCC+TGG | 0.726139 | 3.1:-92853638 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCATAATATGAAATAAAA+GGG | + | chr3.1:92854521-92854540 | MS.gene68135:intron | 10.0% |
| !! | TATTCATAATATGAAATAAA+AGG | + | chr3.1:92854520-92854539 | MS.gene68135:intron | 10.0% |
| !!! | AATATTAATTTGAAATTAAG+TGG | - | chr3.1:92854830-92854849 | None:intergenic | 10.0% |
| !! | GTTAAGATAAATTAAATCAT+TGG | - | chr3.1:92853840-92853859 | None:intergenic | 15.0% |
| !! | TAATATATTCTTAAATTGCT+GGG | + | chr3.1:92854757-92854776 | MS.gene68135:intron | 15.0% |
| !!! | CTTTTTGTTACTTTTTATTT+TGG | + | chr3.1:92855119-92855138 | MS.gene68135:intron | 15.0% |
| !!! | GTTATTGTTTTACTATTTAT+AGG | + | chr3.1:92854592-92854611 | MS.gene68135:intron | 15.0% |
| !! | AATATATTCTTAAATTGCTG+GGG | + | chr3.1:92854758-92854777 | MS.gene68135:intron | 20.0% |
| !! | AATTCAATTTAAATCTCATG+TGG | - | chr3.1:92854238-92854257 | None:intergenic | 20.0% |
| !! | AGAAATCAATTTATAACACA+TGG | - | chr3.1:92853804-92853823 | None:intergenic | 20.0% |
| !! | ATACACAATGATATGTATAA+AGG | - | chr3.1:92854276-92854295 | None:intergenic | 20.0% |
| !! | ATTCAATTTAAATCTCATGT+GGG | - | chr3.1:92854237-92854256 | None:intergenic | 20.0% |
| !! | CTAAAATCATTTAAAGACAT+TGG | + | chr3.1:92853252-92853271 | MS.gene68135:CDS | 20.0% |
| !! | GCAATTTAAGAATATATTAC+AGG | - | chr3.1:92854756-92854775 | None:intergenic | 20.0% |
| !! | GTAATATATTCTTAAATTGC+TGG | + | chr3.1:92854756-92854775 | MS.gene68135:intron | 20.0% |
| !! | TCCAGTATTAAATTTATTAG+TGG | - | chr3.1:92854439-92854458 | None:intergenic | 20.0% |
| !! | TTGTACTAGTTGTATATAAT+TGG | - | chr3.1:92854572-92854591 | None:intergenic | 20.0% |
| !! | TTTATACATATCATTGTGTA+TGG | + | chr3.1:92854275-92854294 | MS.gene68135:intron | 20.0% |
| !!! | AAAAAGTAATGGAAAGAAAT+CGG | + | chr3.1:92855645-92855664 | MS.gene68135:CDS | 20.0% |
| !!! | CTTTCTATTTTATTCATCTT+AGG | + | chr3.1:92854123-92854142 | MS.gene68135:intron | 20.0% |
| !!! | GAAATTTTGAGAAATGTTTA+GGG | - | chr3.1:92854494-92854513 | None:intergenic | 20.0% |
| !!! | GTATTTCTTTTTGAATAGTA+TGG | - | chr3.1:92854464-92854483 | None:intergenic | 20.0% |
| !!! | TGAAATTTTGAGAAATGTTT+AGG | - | chr3.1:92854495-92854514 | None:intergenic | 20.0% |
| ! | AAAATGATAGGTGATAGAAA+AGG | - | chr3.1:92853750-92853769 | None:intergenic | 25.0% |
| ! | AGATAATAGTAGATTGTAGT+GGG | + | chr3.1:92854934-92854953 | MS.gene68135:intron | 25.0% |
| ! | GATAAATTAAATCATTGGTG+CGG | - | chr3.1:92853835-92853854 | None:intergenic | 25.0% |
| ! | GCCACTAATAAATTTAATAC+TGG | + | chr3.1:92854435-92854454 | MS.gene68135:intron | 25.0% |
| ! | GTGTTACAAATAATTCATTG+TGG | + | chr3.1:92855445-92855464 | MS.gene68135:intron | 25.0% |
| ! | TTAACTAATCTAACATGGTA+TGG | + | chr3.1:92853708-92853727 | MS.gene68135:intron | 25.0% |
| !! | TGATTTTAGACTGAAAAAGT+TGG | - | chr3.1:92853241-92853260 | None:intergenic | 25.0% |
| !!! | AGTTTGCTGTAAACATTTTT+TGG | - | chr3.1:92854003-92854022 | None:intergenic | 25.0% |
| !!! | ATTAAACCGTTTTGATAGAA+AGG | + | chr3.1:92855197-92855216 | MS.gene68135:CDS | 25.0% |
| !!! | GTTGGTAACAATTATGAAAA+TGG | + | chr3.1:92854311-92854330 | MS.gene68135:intron | 25.0% |
| !!! | TTAAACCGTTTTGATAGAAA+GGG | + | chr3.1:92855198-92855217 | MS.gene68135:CDS | 25.0% |
| AATAAATATTGTGTGTCCAC+CGG | - | chr3.1:92853964-92853983 | None:intergenic | 30.0% | |
| AGCAATTATACAAGACTTTC+CGG | - | chr3.1:92853367-92853386 | None:intergenic | 30.0% | |
| AGGGATAGTAAAATCGAAAA+TGG | + | chr3.1:92854540-92854559 | MS.gene68135:intron | 30.0% | |
| CAGATAATAGTAGATTGTAG+TGG | + | chr3.1:92854933-92854952 | MS.gene68135:intron | 30.0% | |
| CTGTGATATGAGAAAACATT+TGG | + | chr3.1:92854195-92854214 | MS.gene68135:intron | 30.0% | |
| GAATTCCCTTTCTATCAAAA+CGG | - | chr3.1:92855206-92855225 | None:intergenic | 30.0% | |
| GAGAGATTCAATCATGAAAT+CGG | - | chr3.1:92853283-92853302 | None:intergenic | 30.0% | |
| GATAATAGTAGATTGTAGTG+GGG | + | chr3.1:92854935-92854954 | MS.gene68135:intron | 30.0% | |
| GGTTTAGTCAACAAAATGAT+AGG | - | chr3.1:92853762-92853781 | None:intergenic | 30.0% | |
| TAATCTAACATGGTATGGTA+TGG | + | chr3.1:92853713-92853732 | MS.gene68135:intron | 30.0% | |
| TAGACATTGAACGACAATTA+TGG | - | chr3.1:92853542-92853561 | None:intergenic | 30.0% | |
| TGAAATTAAGTGGTCATTAC+TGG | - | chr3.1:92854820-92854839 | None:intergenic | 30.0% | |
| TGCACTTAACTAATCTAACA+TGG | + | chr3.1:92853703-92853722 | MS.gene68135:CDS | 30.0% | |
| ! | AAGGCATTTATCTTTGTTGT+TGG | + | chr3.1:92855602-92855621 | MS.gene68135:CDS | 30.0% |
| ! | AGTTTTTCCTGATTGTGAAA+TGG | + | chr3.1:92854029-92854048 | MS.gene68135:CDS | 30.0% |
| !! | GGTGGATTTTGAATTTGAAT+TGG | - | chr3.1:92853019-92853038 | None:intergenic | 30.0% |
| !!! | TTCCATTACTTTTTGTGCAA+GGG | - | chr3.1:92855639-92855658 | None:intergenic | 30.0% |
| !!! | TTTCCATTACTTTTTGTGCA+AGG | - | chr3.1:92855640-92855659 | None:intergenic | 30.0% |
| AACGTATTCCCTAAATTTGC+TGG | + | chr3.1:92854160-92854179 | MS.gene68135:intron | 35.0% | |
| AATAACAGGAGCAAATGACA+TGG | - | chr3.1:92853343-92853362 | None:intergenic | 35.0% | |
| ATCCCTTGCACAAAAAGTAA+TGG | + | chr3.1:92855634-92855653 | MS.gene68135:CDS | 35.0% | |
| CATATCATTGTGTATGGTAG+TGG | + | chr3.1:92854281-92854300 | MS.gene68135:intron | 35.0% | |
| GAACTTATTCGATGCATACT+AGG | - | chr3.1:92854063-92854082 | None:intergenic | 35.0% | |
| GGTAAATGACAAGTGTATTC+AGG | - | chr3.1:92853783-92853802 | None:intergenic | 35.0% | |
| GTGACAAGCATAGATTTGAA+TGG | - | chr3.1:92853579-92853598 | None:intergenic | 35.0% | |
| GTGATCCAAGTGAATATGTA+CGG | + | chr3.1:92855540-92855559 | MS.gene68135:CDS | 35.0% | |
| TACTATTTATAGGTCCGCTT+TGG | + | chr3.1:92854602-92854621 | MS.gene68135:intron | 35.0% | |
| TAGTTAAGTGCAAAAAGCCT+TGG | - | chr3.1:92853695-92853714 | None:intergenic | 35.0% | |
| TATTCATCTGTTTATCTCGC+TGG | + | chr3.1:92855345-92855364 | MS.gene68135:intron | 35.0% | |
| TGCAGAACACAATAGTTCTT+GGG | - | chr3.1:92855043-92855062 | None:intergenic | 35.0% | |
| TGTCGTTCAATGTCTAAATC+TGG | + | chr3.1:92853546-92853565 | MS.gene68135:CDS | 35.0% | |
| TTCAAATCTATGCTTGTCAC+TGG | + | chr3.1:92853579-92853598 | MS.gene68135:CDS | 35.0% | |
| TTCAATGTCTAAATCTGGCA+AGG | + | chr3.1:92853551-92853570 | MS.gene68135:CDS | 35.0% | |
| TTGCAGAACACAATAGTTCT+TGG | - | chr3.1:92855044-92855063 | None:intergenic | 35.0% | |
| ! | AAGAAGACAGAGTGTTTACT+GGG | - | chr3.1:92852976-92852995 | None:intergenic | 35.0% |
| ! | ACAAAGTATTCTGAACTCTC+AGG | + | chr3.1:92855063-92855082 | MS.gene68135:intron | 35.0% |
| ! | AGTAATGGAAAGAAATCGGA+AGG | + | chr3.1:92855649-92855668 | MS.gene68135:CDS | 35.0% |
| ! | ATAAACTGGGACACTTCTTT+TGG | - | chr3.1:92855309-92855328 | None:intergenic | 35.0% |
| ! | ATGCTTGATTAGTTCTTCAC+CGG | + | chr3.1:92853942-92853961 | MS.gene68135:CDS | 35.0% |
| ! | GTAATGGAAAGAAATCGGAA+GGG | + | chr3.1:92855650-92855669 | MS.gene68135:CDS | 35.0% |
| ! | TTGTAGTTGTTTGCGTTTTG+TGG | - | chr3.1:92853118-92853137 | None:intergenic | 35.0% |
| !! | AAAAGAAGTGTCCCAGTTTA+TGG | + | chr3.1:92855308-92855327 | MS.gene68135:CDS | 35.0% |
| !! | CTTAAATTGCTGGGGTATTT+TGG | + | chr3.1:92854766-92854785 | MS.gene68135:intron | 35.0% |
| !!! | TGTCGAGTTGAGTTTTTTGT+CGG | - | chr3.1:92853611-92853630 | None:intergenic | 35.0% |
| AAATCTATGCTTGTCACTGG+TGG | + | chr3.1:92853582-92853601 | MS.gene68135:CDS | 40.0% | |
| AAATGACATGGCCTGTATGT+TGG | - | chr3.1:92853331-92853350 | None:intergenic | 40.0% | |
| AACTCATTCGAGAGTTGGAT+GGG | + | chr3.1:92853182-92853201 | MS.gene68135:CDS | 40.0% | |
| AATAAGTTCTCGCCTTGAAG+AGG | + | chr3.1:92854074-92854093 | MS.gene68135:CDS | 40.0% | |
| AATCTCATGTGGGAGACAAA+AGG | - | chr3.1:92854227-92854246 | None:intergenic | 40.0% | |
| ACATATTCACTTGGATCACG+TGG | - | chr3.1:92855539-92855558 | None:intergenic | 40.0% | |
| AGTCAACTCAATAATTGGCG+CGG | + | chr3.1:92854381-92854400 | MS.gene68135:intron | 40.0% | |
| ATAATCAGCTGCTGTGTAAG+TGG | + | chr3.1:92854884-92854903 | MS.gene68135:intron | 40.0% | |
| ATTATGTTGCAGTGCTGTCT+TGG | + | chr3.1:92853870-92853889 | MS.gene68135:intron | 40.0% | |
| CAACTCGACACTTTAAACCA+GGG | + | chr3.1:92853621-92853640 | MS.gene68135:CDS | 40.0% | |
| CATATTCACTTGGATCACGT+GGG | - | chr3.1:92855538-92855557 | None:intergenic | 40.0% | |
| CCTGATTGTGAAATGGTCAT+GGG | + | chr3.1:92854036-92854055 | MS.gene68135:CDS | 40.0% | |
| CTCAGACAACAAGAACTACA+AGG | + | chr3.1:92853441-92853460 | MS.gene68135:CDS | 40.0% | |
| GGTGCAGTCAACTCAATAAT+TGG | + | chr3.1:92854376-92854395 | MS.gene68135:intron | 40.0% | |
| GTCGATAAAACCACGAGTTT+CGG | + | chr3.1:92853039-92853058 | MS.gene68135:CDS | 40.0% | |
| GTCTGTGCAAACCATAAACT+GGG | - | chr3.1:92855322-92855341 | None:intergenic | 40.0% | |
| TAATCAGCTGCTGTGTAAGT+GGG | + | chr3.1:92854885-92854904 | MS.gene68135:intron | 40.0% | |
| TCAACTCGACACTTTAAACC+AGG | + | chr3.1:92853620-92853639 | MS.gene68135:CDS | 40.0% | |
| TCATTTGCTCCTGTTATTGC+CGG | + | chr3.1:92853345-92853364 | MS.gene68135:CDS | 40.0% | |
| TCCTGATTGTGAAATGGTCA+TGG | + | chr3.1:92854035-92854054 | MS.gene68135:CDS | 40.0% | |
| TGTATAATTGCTGACCAGAG+TGG | + | chr3.1:92853375-92853394 | MS.gene68135:CDS | 40.0% | |
| TGTCTGTGCAAACCATAAAC+TGG | - | chr3.1:92855323-92855342 | None:intergenic | 40.0% | |
| TTTCTCTTCCTCATCAACCA+AGG | + | chr3.1:92853675-92853694 | MS.gene68135:CDS | 40.0% | |
| ! | AGTTTATGGTTTGCACAGAC+AGG | + | chr3.1:92855322-92855341 | MS.gene68135:CDS | 40.0% |
| ! | CAATAGGGTTAGCAGTCAAT+CGG | + | chr3.1:92853209-92853228 | MS.gene68135:CDS | 40.0% |
| ! | GAAGAAGACAGAGTGTTTAC+TGG | - | chr3.1:92852977-92852996 | None:intergenic | 40.0% |
| ! | GCGTTTTGTGGTATTTTGCT+TGG | - | chr3.1:92853106-92853125 | None:intergenic | 40.0% |
| ! | TGTCTGAGACGTTGAATGAT+TGG | - | chr3.1:92853429-92853448 | None:intergenic | 40.0% |
| !! | AAAGCGTTGCTGTTTAGCAT+CGG | + | chr3.1:92852937-92852956 | MS.gene68135:CDS | 40.0% |
| !! | ATTCCCTAAATTTGCTGGCT+GGG | + | chr3.1:92854165-92854184 | MS.gene68135:intron | 40.0% |
| !! | GATGAGGTTGATATCCTCTT+TGG | + | chr3.1:92853892-92853911 | MS.gene68135:CDS | 40.0% |
| !! | GGTTGATGAGGAAGAGAAAA+CGG | - | chr3.1:92853674-92853693 | None:intergenic | 40.0% |
| !! | TATTCCCTAAATTTGCTGGC+TGG | + | chr3.1:92854164-92854183 | MS.gene68135:intron | 40.0% |
| !! | TTTTAGTCTTCCGAAACTCG+TGG | - | chr3.1:92853052-92853071 | None:intergenic | 40.0% |
| !!! | GAAACTCGTGGTTTTATCGA+CGG | - | chr3.1:92853040-92853059 | None:intergenic | 40.0% |
| !!! | TGGTATTTTGCTTGGTTCTG+TGG | - | chr3.1:92853098-92853117 | None:intergenic | 40.0% |
| AAAGTTGAAAGCGGCCAAAG+CGG | - | chr3.1:92854619-92854638 | None:intergenic | 45.0% | |
| AACTTGTAACAGAGCTTCGC+GGG | + | chr3.1:92855469-92855488 | MS.gene68135:intron | 45.0% | |
| AAGCCCAGCCAGCAAATTTA+GGG | - | chr3.1:92854171-92854190 | None:intergenic | 45.0% | |
| AAGCCGTGATTCTTGTGTCA+TGG | - | chr3.1:92855256-92855275 | None:intergenic | 45.0% | |
| ACACGCCGTACATATTCACT+TGG | - | chr3.1:92855548-92855567 | None:intergenic | 45.0% | |
| ACATGGCCTGTATGTTGGAA+GGG | - | chr3.1:92853326-92853345 | None:intergenic | 45.0% | |
| ACCTGTCTCTGTTGTCAATG+CGG | + | chr3.1:92854342-92854361 | MS.gene68135:intron | 45.0% | |
| ACTCATTCGAGAGTTGGATG+GGG | + | chr3.1:92853183-92853202 | MS.gene68135:CDS | 45.0% | |
| ACTGCAACTCATTCGAGAGT+TGG | + | chr3.1:92853177-92853196 | MS.gene68135:CDS | 45.0% | |
| AGTGAAACCTGACCTCTTCA+AGG | - | chr3.1:92854089-92854108 | None:intergenic | 45.0% | |
| AGTGAATATGTACGGCGTGT+TGG | + | chr3.1:92855548-92855567 | MS.gene68135:CDS | 45.0% | |
| AGTTGGATGGGGAGACAATA+GGG | + | chr3.1:92853194-92853213 | MS.gene68135:CDS | 45.0% | |
| ATGTCTTTCCAGAACCACTC+TGG | - | chr3.1:92853392-92853411 | None:intergenic | 45.0% | |
| ATTCTTGTGTCATGGCAGCA+TGG | - | chr3.1:92855248-92855267 | None:intergenic | 45.0% | |
| CAACTCATTCGAGAGTTGGA+TGG | + | chr3.1:92853181-92853200 | MS.gene68135:CDS | 45.0% | |
| CAACTTGTAACAGAGCTTCG+CGG | + | chr3.1:92855468-92855487 | MS.gene68135:intron | 45.0% | |
| CAAGACTTTCCGGCAATAAC+AGG | - | chr3.1:92853357-92853376 | None:intergenic | 45.0% | |
| CCCATGACCATTTCACAATC+AGG | - | chr3.1:92854039-92854058 | None:intergenic | 45.0% | |
| CGCGTGTCAAAAGTTGAAAG+CGG | - | chr3.1:92854628-92854647 | None:intergenic | 45.0% | |
| CTATCAAGACATCAACACCC+TGG | - | chr3.1:92853641-92853660 | None:intergenic | 45.0% | |
| CTGCCATGACACAAGAATCA+CGG | + | chr3.1:92855250-92855269 | MS.gene68135:CDS | 45.0% | |
| CTGTTGTCAATGCGGAAATG+CGG | + | chr3.1:92854350-92854369 | MS.gene68135:intron | 45.0% | |
| GGCGAGTTAAAGAGAGGTTA+TGG | - | chr3.1:92853305-92853324 | None:intergenic | 45.0% | |
| GGTGCGAGTATAACAAGAGT+AGG | - | chr3.1:92853492-92853511 | None:intergenic | 45.0% | |
| TCCACTGCATGATGTACCTT+CGG | + | chr3.1:92855676-92855695 | MS.gene68135:CDS | 45.0% | |
| TGAGAAGCTAACTCAGCTGT+GGG | - | chr3.1:92853513-92853532 | None:intergenic | 45.0% | |
| TGATATCCTCTTTGGCGATG+AGG | + | chr3.1:92853900-92853919 | MS.gene68135:CDS | 45.0% | |
| ! | AACTGGGACACTTCTTTTGG+TGG | - | chr3.1:92855306-92855325 | None:intergenic | 45.0% |
| ! | CTTGATTAGTTCTTCACCGG+TGG | + | chr3.1:92853945-92853964 | MS.gene68135:CDS | 45.0% |
| ! | GATGTCTTGATAGCTACACC+TGG | + | chr3.1:92853648-92853667 | MS.gene68135:CDS | 45.0% |
| ! | GCAAAAAGCCTTGGTTGATG+AGG | - | chr3.1:92853686-92853705 | None:intergenic | 45.0% |
| ! | GGGAATTGACTTCACTAGAG+TGG | + | chr3.1:92855490-92855509 | MS.gene68135:CDS | 45.0% |
| ! | GTAGATTGTAGTGGGGAAGA+TGG | + | chr3.1:92854942-92854961 | MS.gene68135:CDS | 45.0% |
| !! | ATCACGGCTTGCTAGTATGA+AGG | + | chr3.1:92855266-92855285 | MS.gene68135:CDS | 45.0% |
| !! | TATGGTAGTGGCAGTACAGT+TGG | + | chr3.1:92854293-92854312 | MS.gene68135:intron | 45.0% |
| !! | TTGCTGTTTAGCATCGGAGT+TGG | + | chr3.1:92852943-92852962 | MS.gene68135:CDS | 45.0% |
| AAAAACAGGACCACCGCACT+AGG | - | chr3.1:92854680-92854699 | None:intergenic | 50.0% | |
| AACTCGCCCTTCCAACATAC+AGG | + | chr3.1:92853317-92853336 | MS.gene68135:CDS | 50.0% | |
| ACTCAATAATTGGCGCGGTG+CGG | + | chr3.1:92854386-92854405 | MS.gene68135:intron | 50.0% | |
| ACTGGTCACTGAATCCAGCA+TGG | - | chr3.1:92854802-92854821 | None:intergenic | 50.0% | |
| ACTTGTAACAGAGCTTCGCG+GGG | + | chr3.1:92855470-92855489 | MS.gene68135:intron | 50.0% | |
| ATGAGGAAGAGAAAACGGCC+AGG | - | chr3.1:92853669-92853688 | None:intergenic | 50.0% | |
| ATTGCTGACCAGAGTGGTTC+TGG | + | chr3.1:92853381-92853400 | MS.gene68135:CDS | 50.0% | |
| CAAGCCCAGCCAGCAAATTT+AGG | - | chr3.1:92854172-92854191 | None:intergenic | 50.0% | |
| CTGAGAAGCTAACTCAGCTG+TGG | - | chr3.1:92853514-92853533 | None:intergenic | 50.0% | |
| GACATGGCCTGTATGTTGGA+AGG | - | chr3.1:92853327-92853346 | None:intergenic | 50.0% | |
| GAGTTGGATGGGGAGACAAT+AGG | + | chr3.1:92853193-92853212 | MS.gene68135:CDS | 50.0% | |
| TGGAAGGGCGAGTTAAAGAG+AGG | - | chr3.1:92853311-92853330 | None:intergenic | 50.0% | |
| TGGCGATGAGGACTTCGAAA+AGG | + | chr3.1:92853912-92853931 | MS.gene68135:CDS | 50.0% | |
| TGTGTCATGGCAGCATGGAA+AGG | - | chr3.1:92855243-92855262 | None:intergenic | 50.0% | |
| TTGCAGTGCTGTCTTGGATG+AGG | + | chr3.1:92853876-92853895 | MS.gene68135:intron | 50.0% | |
| ! | CACAGCTGAGTTAGCTTCTC+AGG | + | chr3.1:92853512-92853531 | MS.gene68135:CDS | 50.0% |
| ! | TAGGGTTAGCAGTCAATCGG+AGG | + | chr3.1:92853212-92853231 | MS.gene68135:CDS | 50.0% |
| ! | TCCGCATTGACAACAGAGAC+AGG | - | chr3.1:92854346-92854365 | None:intergenic | 50.0% |
| !!! | ACTCGTGGTTTTATCGACGG+TGG | - | chr3.1:92853037-92853056 | None:intergenic | 50.0% |
| !!! | TGGGGTATTTTGGTGTGTGC+AGG | + | chr3.1:92854776-92854795 | MS.gene68135:intron | 50.0% |
| AGCTGCTCTTCTGCAGCTTG+CGG | + | chr3.1:92855004-92855023 | MS.gene68135:CDS | 55.0% | |
| CGAAGTCCTCATCGCCAAAG+AGG | - | chr3.1:92853909-92853928 | None:intergenic | 55.0% | |
| CGGAGTGGAGCGGAAAAAAC+AGG | - | chr3.1:92854694-92854713 | None:intergenic | 55.0% | |
| CGTGTTGGAAGAACAGCCAG+AGG | + | chr3.1:92855563-92855582 | MS.gene68135:CDS | 55.0% | |
| CTCAATAATTGGCGCGGTGC+GGG | + | chr3.1:92854387-92854406 | MS.gene68135:intron | 55.0% | |
| GTTCTCGCCTTGAAGAGGTC+AGG | + | chr3.1:92854079-92854098 | MS.gene68135:intron | 55.0% | |
| ! | GCCGAAGGTACATCATGCAG+TGG | - | chr3.1:92855680-92855699 | None:intergenic | 55.0% |
| ! | GGGGCACTATTTCGGTAGTG+CGG | + | chr3.1:92854413-92854432 | MS.gene68135:intron | 55.0% |
| ! | GTGGTTGCGCAAGGTGTTTG+TGG | + | chr3.1:92852913-92852932 | MS.gene68135:CDS | 55.0% |
| !! | AAGAACAGCCAGAGGTGCCA+GGG | + | chr3.1:92855571-92855590 | MS.gene68135:CDS | 55.0% |
| !! | ACTTTTGACACGCGCTGACG+CGG | + | chr3.1:92854634-92854653 | MS.gene68135:intron | 55.0% |
| AAATGCCTTGCCCTGTCCCC+TGG | - | chr3.1:92855591-92855610 | None:intergenic | 60.0% | |
| AGCCACGTCGACCGCTATAG+CGG | - | chr3.1:92854714-92854733 | None:intergenic | 60.0% | |
| GTCAATGCGGAAATGCGGCG+CGG | + | chr3.1:92854355-92854374 | MS.gene68135:intron | 60.0% | |
| TCCGCTCCACTCCGCTATAG+CGG | + | chr3.1:92854700-92854719 | MS.gene68135:intron | 60.0% | |
| TTGGTGTGTGCAGGCCATGC+TGG | + | chr3.1:92854785-92854804 | MS.gene68135:intron | 60.0% | |
| ! | ACCGCTATAGCGGAGTGGAG+CGG | - | chr3.1:92854704-92854723 | None:intergenic | 60.0% |
| !! | AGAACAGCCAGAGGTGCCAG+GGG | + | chr3.1:92855572-92855591 | MS.gene68135:CDS | 60.0% |
| !! | GAAGAACAGCCAGAGGTGCC+AGG | + | chr3.1:92855570-92855589 | MS.gene68135:CDS | 60.0% |
| CTCCGCTATAGCGGTCGACG+TGG | + | chr3.1:92854709-92854728 | MS.gene68135:intron | 65.0% | |
| TAATTGGCGCGGTGCGGGAG+CGG | + | chr3.1:92854392-92854411 | MS.gene68135:intron | 65.0% | |
| ! | CGTCGACCGCTATAGCGGAG+TGG | - | chr3.1:92854709-92854728 | None:intergenic | 65.0% |
| ! | GCGGGAGCGGGGCACTATTT+CGG | + | chr3.1:92854405-92854424 | MS.gene68135:intron | 65.0% |
| AATTGGCGCGGTGCGGGAGC+GGG | + | chr3.1:92854393-92854412 | MS.gene68135:intron | 70.0% | |
| ACCACCGCACTAGGCCGAGC+CGG | - | chr3.1:92854671-92854690 | None:intergenic | 70.0% | |
| AGGTGCCAGGGGACAGGGCA+AGG | + | chr3.1:92855583-92855602 | MS.gene68135:CDS | 70.0% | |
| TGACGCGGCCTGAGACACGC+CGG | + | chr3.1:92854649-92854668 | MS.gene68135:intron | 70.0% | |
| !! | AGCCAGAGGTGCCAGGGGAC+AGG | + | chr3.1:92855577-92855596 | MS.gene68135:CDS | 70.0% |
| !! | GCCAGAGGTGCCAGGGGACA+GGG | + | chr3.1:92855578-92855597 | MS.gene68135:CDS | 70.0% |
| AGGCCGAGCCGGCGTGTCTC+AGG | - | chr3.1:92854660-92854679 | None:intergenic | 75.0% | |
| ATTGGCGCGGTGCGGGAGCG+GGG | + | chr3.1:92854394-92854413 | MS.gene68135:intron | 75.0% | |
| GCCCTGTCCCCTGGCACCTC+TGG | - | chr3.1:92855582-92855601 | None:intergenic | 75.0% | |
| ! | CGGCCTGAGACACGCCGGCT+CGG | + | chr3.1:92854654-92854673 | MS.gene68135:intron | 75.0% |
| !! | CACGCCGGCTCGGCCTAGTG+CGG | + | chr3.1:92854664-92854683 | MS.gene68135:intron | 75.0% |
| !!! | GCCGGCTCGGCCTAGTGCGG+TGG | + | chr3.1:92854667-92854686 | MS.gene68135:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 92852907 | 92855712 | 92852907 | ID=MS.gene68135 |
| chr3.1 | mRNA | 92852907 | 92855712 | 92852907 | ID=MS.gene68135.t1;Parent=MS.gene68135 |
| chr3.1 | exon | 92852907 | 92853724 | 92852907 | ID=MS.gene68135.t1.exon1;Parent=MS.gene68135.t1 |
| chr3.1 | CDS | 92852907 | 92853724 | 92852907 | ID=cds.MS.gene68135.t1;Parent=MS.gene68135.t1 |
| chr3.1 | exon | 92853882 | 92854095 | 92853882 | ID=MS.gene68135.t1.exon2;Parent=MS.gene68135.t1 |
| chr3.1 | CDS | 92853882 | 92854095 | 92853882 | ID=cds.MS.gene68135.t1;Parent=MS.gene68135.t1 |
| chr3.1 | exon | 92854936 | 92855067 | 92854936 | ID=MS.gene68135.t1.exon3;Parent=MS.gene68135.t1 |
| chr3.1 | CDS | 92854936 | 92855067 | 92854936 | ID=cds.MS.gene68135.t1;Parent=MS.gene68135.t1 |
| chr3.1 | exon | 92855168 | 92855343 | 92855168 | ID=MS.gene68135.t1.exon4;Parent=MS.gene68135.t1 |
| chr3.1 | CDS | 92855168 | 92855343 | 92855168 | ID=cds.MS.gene68135.t1;Parent=MS.gene68135.t1 |
| chr3.1 | exon | 92855481 | 92855712 | 92855481 | ID=MS.gene68135.t1.exon5;Parent=MS.gene68135.t1 |
| chr3.1 | CDS | 92855481 | 92855712 | 92855481 | ID=cds.MS.gene68135.t1;Parent=MS.gene68135.t1 |
| Gene Sequence |
| Protein sequence |
