Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068024.t1 | XP_003608394.1 | 94.5 | 398 | 17 | 2 | 1 | 393 | 1 | 398 | 2.60E-210 | 741.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068024.t1 | Q07204 | 47.2 | 320 | 150 | 6 | 79 | 380 | 91 | 409 | 1.4e-74 | 281.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068024.t1 | G7JV43 | 94.5 | 398 | 17 | 2 | 1 | 393 | 1 | 398 | 1.9e-210 | 741.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene068024 | 0.861369 | 1.08E-63 | -1.69E-46 |
| MS.gene049171 | MS.gene068024 | 0.81783 | 2.69E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene068024 | 0.834643 | 2.66E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene068024 | 0.886848 | 2.39E-72 | -1.69E-46 |
| MS.gene049285 | MS.gene068024 | 0.840421 | 8.78E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene068024 | 0.831862 | 1.31E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene068024 | 0.857562 | 1.50E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene068024 | 0.849067 | 4.10E-60 | -1.69E-46 |
| MS.gene049615 | MS.gene068024 | 0.820409 | 6.96E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene068024 | 0.862154 | 6.19E-64 | -1.69E-46 |
| MS.gene050076 | MS.gene068024 | 0.813508 | 2.47E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene068024 | 0.841871 | 3.65E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene068024 | 0.815472 | 9.09E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene068024 | 0.81907 | 1.41E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene068024 | 0.81922 | 1.30E-52 | -1.69E-46 |
| MS.gene050507 | MS.gene068024 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene050518 | MS.gene068024 | 0.826831 | 2.19E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene068024 | 0.871274 | 7.74E-67 | -1.69E-46 |
| MS.gene050577 | MS.gene068024 | 0.827975 | 1.16E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene068024 | 0.847221 | 1.33E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene068024 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene068024 | 0.816452 | 5.49E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene068024 | 0.807659 | 4.54E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene068024 | 0.8299 | 3.97E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene068024 | 0.898842 | 3.57E-77 | -1.69E-46 |
| MS.gene050772 | MS.gene068024 | 0.852395 | 4.75E-61 | -1.69E-46 |
| MS.gene050781 | MS.gene068024 | 0.861807 | 7.91E-64 | -1.69E-46 |
| MS.gene050783 | MS.gene068024 | 0.83971 | 1.35E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene068024 | 0.825579 | 4.34E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene068024 | 0.849829 | 2.52E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene068024 | 0.889007 | 3.56E-73 | -1.69E-46 |
| MS.gene05100 | MS.gene068024 | 0.832506 | 9.09E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene068024 | 0.818699 | 1.71E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene068024 | 0.812927 | 3.31E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene068024 | 0.883613 | 3.87E-71 | -1.69E-46 |
| MS.gene051666 | MS.gene068024 | 0.866606 | 2.52E-65 | -1.69E-46 |
| MS.gene051694 | MS.gene068024 | 0.857442 | 1.63E-62 | -1.69E-46 |
| MS.gene051838 | MS.gene068024 | 0.807695 | 4.46E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene068024 | 0.805686 | 1.18E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene068024 | 0.801862 | 7.37E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene068024 | 0.845524 | 3.85E-59 | -1.69E-46 |
| MS.gene052421 | MS.gene068024 | 0.819264 | 1.27E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene068024 | 0.838201 | 3.31E-57 | -1.69E-46 |
| MS.gene052503 | MS.gene068024 | 0.826548 | 2.55E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene068024 | 0.844895 | 5.69E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene068024 | 0.851866 | 6.71E-61 | -1.69E-46 |
| MS.gene052670 | MS.gene068024 | 0.809487 | 1.85E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene068024 | 0.820614 | 6.25E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene068024 | 0.822272 | 2.59E-53 | -1.69E-46 |
| MS.gene052982 | MS.gene068024 | 0.814827 | 1.26E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene068024 | 0.832556 | 8.83E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene068024 | 0.851094 | 1.11E-60 | -1.69E-46 |
| MS.gene053107 | MS.gene068024 | 0.863028 | 3.33E-64 | -1.69E-46 |
| MS.gene053203 | MS.gene068024 | 0.811539 | 6.66E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene068024 | 0.844422 | 7.64E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene068024 | 0.869175 | 3.77E-66 | -1.69E-46 |
| MS.gene053286 | MS.gene068024 | 0.860659 | 1.77E-63 | -1.69E-46 |
| MS.gene053322 | MS.gene068024 | 0.846296 | 2.37E-59 | -1.69E-46 |
| MS.gene053436 | MS.gene068024 | 0.840359 | 9.12E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene068024 | 0.841259 | 5.30E-58 | -1.69E-46 |
| MS.gene053579 | MS.gene068024 | 0.953377 | 3.13E-111 | -1.69E-46 |
| MS.gene053626 | MS.gene068024 | 0.819546 | 1.10E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene068024 | 0.862969 | 3.48E-64 | -1.69E-46 |
| MS.gene053824 | MS.gene068024 | 0.811932 | 5.47E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene068024 | 0.808883 | 2.49E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene068024 | 0.85953 | 3.88E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene068024 | 0.828979 | 6.65E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene068024 | 0.84286 | 2.00E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene068024 | 0.84531 | 4.40E-59 | -1.69E-46 |
| MS.gene054802 | MS.gene068024 | 0.827546 | 1.47E-54 | -1.69E-46 |
| MS.gene054803 | MS.gene068024 | 0.823122 | 1.64E-53 | -1.69E-46 |
| MS.gene054804 | MS.gene068024 | 0.825876 | 3.69E-54 | -1.69E-46 |
| MS.gene054927 | MS.gene068024 | 0.825274 | 5.13E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene068024 | 0.831553 | 1.56E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene068024 | 0.829418 | 5.21E-55 | -1.69E-46 |
| MS.gene055212 | MS.gene068024 | 0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene068024 | 0.838537 | 2.71E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene068024 | 0.826696 | 2.35E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene068024 | 0.800566 | 1.36E-48 | -1.69E-46 |
| MS.gene055412 | MS.gene068024 | 0.81892 | 1.52E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene068024 | 0.833808 | 4.31E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene068024 | 0.858703 | 6.87E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene068024 | 0.841558 | 4.42E-58 | -1.69E-46 |
| MS.gene055605 | MS.gene068024 | 0.818156 | 2.27E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene068024 | 0.814404 | 1.57E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene068024 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene068024 | 0.829533 | 4.88E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene068024 | 0.828791 | 7.39E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene068024 | 0.805374 | 1.38E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene068024 | 0.811796 | 5.85E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene068024 | 0.843757 | 1.15E-58 | -1.69E-46 |
| MS.gene056040 | MS.gene068024 | 0.81286 | 3.43E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene068024 | 0.806489 | 8.02E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene068024 | 0.80023 | 1.59E-48 | -1.69E-46 |
| MS.gene056407 | MS.gene068024 | 0.836721 | 7.92E-57 | -1.69E-46 |
| MS.gene056446 | MS.gene068024 | 0.803652 | 3.15E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene068024 | 0.803468 | 3.44E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene068024 | 0.847134 | 1.40E-59 | -1.69E-46 |
| MS.gene056692 | MS.gene068024 | 0.832792 | 7.72E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene068024 | 0.878319 | 3.09E-69 | -1.69E-46 |
| MS.gene057129 | MS.gene068024 | 0.837832 | 4.12E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene068024 | 0.868882 | 4.69E-66 | -1.69E-46 |
| MS.gene057331 | MS.gene068024 | 0.814117 | 1.81E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene068024 | 0.87136 | 7.25E-67 | -1.69E-46 |
| MS.gene057658 | MS.gene068024 | 0.843617 | 1.26E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene068024 | 0.857889 | 1.20E-62 | -1.69E-46 |
| MS.gene05787 | MS.gene068024 | 0.80264 | 5.10E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene068024 | 0.801228 | 9.94E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene068024 | 0.880384 | 5.74E-70 | -1.69E-46 |
| MS.gene058130 | MS.gene068024 | 0.816141 | 6.44E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene068024 | 0.812685 | 3.74E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene068024 | 0.840436 | 8.71E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene068024 | 0.8422 | 2.99E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene068024 | 0.838981 | 2.08E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene068024 | 0.847951 | 8.35E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene068024 | 0.854638 | 1.08E-61 | -1.69E-46 |
| MS.gene058660 | MS.gene068024 | 0.821719 | 3.48E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene068024 | 0.814913 | 1.21E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene068024 | 0.812966 | 3.25E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene068024 | 0.830886 | 2.28E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene068024 | 0.82665 | 2.42E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene068024 | 0.828434 | 9.01E-55 | -1.69E-46 |
| MS.gene059029 | MS.gene068024 | 0.812559 | 3.99E-51 | -1.69E-46 |
| MS.gene05914 | MS.gene068024 | 0.820935 | 5.27E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene068024 | 0.877628 | 5.40E-69 | -1.69E-46 |
| MS.gene059526 | MS.gene068024 | -0.812012 | 5.25E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene068024 | 0.851097 | 1.11E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene068024 | 0.812239 | 4.69E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene068024 | 0.836553 | 8.75E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene068024 | 0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene068024 | 0.860611 | 1.83E-63 | -1.69E-46 |
| MS.gene059756 | MS.gene068024 | 0.835409 | 1.71E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene068024 | 0.807623 | 4.62E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene068024 | 0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene068024 | 0.892752 | 1.19E-74 | -1.69E-46 |
| MS.gene060193 | MS.gene068024 | 0.808432 | 3.11E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene068024 | 0.803962 | 2.71E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene068024 | 0.826056 | 3.34E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene068024 | 0.82071 | 5.94E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene068024 | 0.837966 | 3.81E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene068024 | 0.805225 | 1.48E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene068024 | 0.819113 | 1.38E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene068024 | 0.889452 | 2.39E-73 | -1.69E-46 |
| MS.gene061041 | MS.gene068024 | 0.853479 | 2.33E-61 | -1.69E-46 |
| MS.gene061150 | MS.gene068024 | 0.862106 | 6.41E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene068024 | 0.854917 | 8.94E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055116 | MS.gene068024 | PPI |
| MS.gene80354 | MS.gene068024 | PPI |
| MS.gene019792 | MS.gene068024 | PPI |
| MS.gene068024 | MS.gene85727 | PPI |
| MS.gene94785 | MS.gene068024 | PPI |
| MS.gene48151 | MS.gene068024 | PPI |
| MS.gene068024 | MS.gene46018 | PPI |
| MS.gene068024 | MS.gene03323 | PPI |
| MS.gene84575 | MS.gene068024 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068024.t1 | MTR_4g093620 | 94.472 | 398 | 17 | 2 | 1 | 393 | 1 | 398 | 0.0 | 752 |
| MS.gene068024.t1 | MTR_7g066120 | 41.404 | 413 | 205 | 12 | 1 | 380 | 1 | 409 | 8.82e-92 | 282 |
| MS.gene068024.t1 | MTR_2g008030 | 42.122 | 311 | 155 | 7 | 82 | 378 | 32 | 331 | 1.25e-74 | 236 |
| MS.gene068024.t1 | MTR_6g035305 | 40.909 | 308 | 165 | 6 | 82 | 379 | 32 | 332 | 5.12e-73 | 231 |
| MS.gene068024.t1 | MTR_0776s0010 | 37.742 | 310 | 174 | 6 | 80 | 375 | 307 | 611 | 1.65e-56 | 200 |
| MS.gene068024.t1 | MTR_3g070100 | 26.148 | 283 | 170 | 12 | 119 | 386 | 120 | 378 | 1.41e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068024.t1 | AT5G64380 | 76.389 | 360 | 74 | 3 | 40 | 393 | 50 | 404 | 0.0 | 561 |
| MS.gene068024.t1 | AT3G54050 | 46.417 | 321 | 152 | 6 | 79 | 380 | 96 | 415 | 4.80e-91 | 280 |
| MS.gene068024.t1 | AT3G54050 | 46.417 | 321 | 152 | 6 | 79 | 380 | 96 | 415 | 4.80e-91 | 280 |
| MS.gene068024.t1 | AT1G43670 | 41.956 | 317 | 167 | 7 | 82 | 388 | 32 | 341 | 1.39e-78 | 246 |
| MS.gene068024.t1 | AT3G55800 | 27.273 | 286 | 169 | 14 | 119 | 389 | 127 | 388 | 1.75e-14 | 74.7 |
Find 90 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGCATTACCTTTGGCTC+TGG | 0.272844 | 4.3:+20884971 | MS.gene068024:CDS |
| TCCCTATCAGAACCACTATT+TGG | 0.303466 | 4.3:-20883424 | None:intergenic |
| AGTCTTTGGTGCAGTTTAAC+TGG | 0.327999 | 4.3:-20885927 | None:intergenic |
| ATTCACTCCAAAGTGGAAAT+AGG | 0.331263 | 4.3:+20884906 | MS.gene068024:CDS |
| CTCCATCGAACTTTGTTGTA+TGG | 0.346740 | 4.3:+20885780 | MS.gene068024:CDS |
| TACCTTGCAGAGTACTTCTT+AGG | 0.348324 | 4.3:-20885735 | None:intergenic |
| ATATATTTCCTTAAGCCTTC+AGG | 0.350818 | 4.3:-20885681 | None:intergenic |
| GTAAAACCACTATCAGTCTT+AGG | 0.354058 | 4.3:+20883214 | MS.gene068024:CDS |
| GTAGGTAAAGGAGGTGGAAT+TGG | 0.362077 | 4.3:+20883301 | MS.gene068024:CDS |
| GGTTGGAAAGTTTGAAGCTT+TGG | 0.362731 | 4.3:-20883142 | None:intergenic |
| TTGATTGGCCTGAAGGCTTA+AGG | 0.371460 | 4.3:+20885673 | MS.gene068024:CDS |
| CTTGTTACTGAAGCCATTGT+TGG | 0.385235 | 4.3:-20883190 | None:intergenic |
| AATTGGTGTGAATGATGATT+TGG | 0.387215 | 4.3:+20883318 | MS.gene068024:CDS |
| TTCACTCTCGACCGTTCAAC+AGG | 0.404800 | 4.3:+20885004 | MS.gene068024:CDS |
| ATGGAAGAGTTGGAAAGTTA+TGG | 0.406247 | 4.3:+20885978 | MS.gene068024:CDS |
| ACCATTGATATGCCAAATAG+TGG | 0.413324 | 4.3:+20883412 | MS.gene068024:CDS |
| CTATCAGCCTATTTCCACTT+TGG | 0.418294 | 4.3:-20884913 | None:intergenic |
| AAAAGTAAATCCTGGTTATG+AGG | 0.419122 | 4.3:+20886013 | MS.gene068024:CDS |
| GGATCTGTCACGACCACATA+TGG | 0.420264 | 4.3:-20884770 | None:intergenic |
| GAAGGTGATGAGTTGATAGA+AGG | 0.422120 | 4.3:-20883116 | None:intergenic |
| GATATAATATCAAGAGGCTT+TGG | 0.431354 | 4.3:-20883451 | None:intergenic |
| GGAAATAGGCTGATAGCTTC+TGG | 0.433737 | 4.3:+20884920 | MS.gene068024:CDS |
| TCCATCGAACTTTGTTGTAT+GGG | 0.439545 | 4.3:+20885781 | MS.gene068024:CDS |
| TGCCAAATAGTGGTTCTGAT+AGG | 0.439936 | 4.3:+20883422 | MS.gene068024:CDS |
| AAAGCCTCTTGATATTATAT+CGG | 0.440217 | 4.3:+20883453 | MS.gene068024:CDS |
| ACTATACTCTGCATTACCTT+TGG | 0.441406 | 4.3:+20884965 | MS.gene068024:CDS |
| TTTGAAAGACATGGAAGAGT+TGG | 0.444010 | 4.3:+20885968 | MS.gene068024:CDS |
| CCATTGTTGGAGTGAAGAAA+AGG | 0.457793 | 4.3:-20883177 | None:intergenic |
| ATCTGGAAAAGTTGCTGTCA+TGG | 0.460073 | 4.3:+20884703 | MS.gene068024:CDS |
| TCAACAGTAGCAAGTGATGA+TGG | 0.462555 | 4.3:+20883256 | MS.gene068024:CDS |
| CCATCGAACTTTGTTGTATG+GGG | 0.479077 | 4.3:+20885782 | MS.gene068024:CDS |
| ATTGATGCATCCATACCAAC+TGG | 0.487257 | 4.3:+20884812 | MS.gene068024:CDS |
| CTTCATAAACAAGACGAAGA+TGG | 0.490062 | 4.3:-20885827 | None:intergenic |
| TCTGCATTACCTTTGGCTCT+GGG | 0.492545 | 4.3:+20884972 | MS.gene068024:CDS |
| GAAAATTGTACCAGTTGGTA+TGG | 0.498000 | 4.3:-20884822 | None:intergenic |
| GCCAAATAGTGGTTCTGATA+GGG | 0.510565 | 4.3:+20883423 | MS.gene068024:CDS |
| GTGGAGCAAGCTGGTGGGAG+AGG | 0.519722 | 4.3:+20885870 | MS.gene068024:CDS |
| AGTTTGAAGCTTTGGTCGGA+AGG | 0.522108 | 4.3:-20883134 | None:intergenic |
| TGATGGGTCTGTTACATTGA+TGG | 0.523388 | 4.3:+20883273 | MS.gene068024:CDS |
| GAAGTACCTAAGACTGATAG+TGG | 0.526082 | 4.3:-20883220 | None:intergenic |
| ACCACTATTTGGCATATCAA+TGG | 0.526712 | 4.3:-20883413 | None:intergenic |
| TAATCTGCCCACAGAGGAGA+AGG | 0.532639 | 4.3:+20884874 | MS.gene068024:CDS |
| TGCTCCACGATGAAACTAAG+AGG | 0.534585 | 4.3:-20885855 | None:intergenic |
| TTGATGGAGTATGTAGGTAA+AGG | 0.537527 | 4.3:+20883289 | MS.gene068024:CDS |
| ATGGAGTATGTAGGTAAAGG+AGG | 0.539783 | 4.3:+20883292 | MS.gene068024:CDS |
| AGCAAAGCCTTCTCCTCTGT+GGG | 0.541176 | 4.3:-20884881 | None:intergenic |
| GAGTATGTAGGTAAAGGAGG+TGG | 0.541348 | 4.3:+20883295 | MS.gene068024:CDS |
| CCAACTTGGATAAGTGATGA+TGG | 0.545731 | 4.3:+20884746 | MS.gene068024:CDS |
| CATTGTTGGAGTGAAGAAAA+GGG | 0.551735 | 4.3:-20883176 | None:intergenic |
| GTTGGAGTGAAGAAAAGGGT+TGG | 0.561218 | 4.3:-20883172 | None:intergenic |
| CGGTATTTATAAACGCCTTG+AGG | 0.565322 | 4.3:+20884844 | MS.gene068024:CDS |
| AGTTTCATCGTGGAGCAAGC+TGG | 0.566038 | 4.3:+20885861 | MS.gene068024:CDS |
| CCATCATCACTTATCCAAGT+TGG | 0.566146 | 4.3:-20884746 | None:intergenic |
| AAGAAAATGATACACCAACT+TGG | 0.571987 | 4.3:+20884732 | MS.gene068024:CDS |
| GGGGTGTGGCGATGAATCCG+AGG | 0.573022 | 4.3:+20885802 | MS.gene068024:CDS |
| CAACAGTAGCAAGTGATGAT+GGG | 0.579069 | 4.3:+20883257 | MS.gene068024:CDS |
| GATACTGTGAGACAAGGAAA+AGG | 0.580838 | 4.3:+20885705 | MS.gene068024:CDS |
| TTGCTGAATTCACTCCAAAG+TGG | 0.581831 | 4.3:+20884899 | MS.gene068024:CDS |
| TTTAGGGAGTTTGAAAGACA+TGG | 0.583051 | 4.3:+20885959 | MS.gene068024:CDS |
| GTTACATTGATGGAGTATGT+AGG | 0.584657 | 4.3:+20883283 | MS.gene068024:CDS |
| CAGCAAAGCCTTCTCCTCTG+TGG | 0.586371 | 4.3:-20884882 | None:intergenic |
| TGCATGTGTCCCAGAGCCAA+AGG | 0.587943 | 4.3:-20884981 | None:intergenic |
| CCCCATACAACAAAGTTCGA+TGG | 0.588449 | 4.3:-20885782 | None:intergenic |
| ATATCAATGGTATAATTGAA+AGG | 0.591706 | 4.3:-20883400 | None:intergenic |
| TTCATCGTGGAGCAAGCTGG+TGG | 0.592470 | 4.3:+20885864 | MS.gene068024:CDS |
| GGAAAGTTTGAAGCTTTGGT+CGG | 0.593641 | 4.3:-20883138 | None:intergenic |
| AAGGTGATGAGTTGATAGAA+GGG | 0.593820 | 4.3:-20883115 | None:intergenic |
| ATCCTAAGAAGTACTCTGCA+AGG | 0.594963 | 4.3:+20885733 | MS.gene068024:CDS |
| GTCGTGACAGATCCCCTCGA+TGG | 0.599505 | 4.3:+20884779 | MS.gene068024:CDS |
| ATACCGAAAATTGTACCAGT+TGG | 0.603945 | 4.3:-20884827 | None:intergenic |
| CATCGAACTTTGTTGTATGG+GGG | 0.606647 | 4.3:+20885783 | MS.gene068024:CDS |
| TGCTACTGTTGATGAAGATG+AGG | 0.607320 | 4.3:-20883245 | None:intergenic |
| CACACCGATATAATATCAAG+AGG | 0.613129 | 4.3:-20883457 | None:intergenic |
| GGGTGTGGCGATGAATCCGA+GGG | 0.615240 | 4.3:+20885803 | MS.gene068024:CDS |
| TAGCATCAAACCTCATAACC+AGG | 0.619050 | 4.3:-20886023 | None:intergenic |
| GCAGATTATCTAGCTCCTCA+AGG | 0.619596 | 4.3:-20884859 | None:intergenic |
| AATATTTCGAGAACCATCGA+GGG | 0.619869 | 4.3:-20884792 | None:intergenic |
| ACAAGACGAAGATGGTCCCT+CGG | 0.621507 | 4.3:-20885819 | None:intergenic |
| GCTCCACGATGAAACTAAGA+GGG | 0.623232 | 4.3:-20885854 | None:intergenic |
| GAATGAAGTCTCCTGTTGAA+CGG | 0.631390 | 4.3:-20885015 | None:intergenic |
| GCTGGTGGGAGAGGATCCGA+TGG | 0.631525 | 4.3:+20885879 | MS.gene068024:CDS |
| AAGTGATGATGGTCCATATG+TGG | 0.632479 | 4.3:+20884757 | MS.gene068024:CDS |
| TCATCGTGGAGCAAGCTGGT+GGG | 0.634727 | 4.3:+20885865 | MS.gene068024:CDS |
| CAATATTTCGAGAACCATCG+AGG | 0.656931 | 4.3:-20884793 | None:intergenic |
| AGCATTAAAATTCCTCCCCG+TGG | 0.680772 | 4.3:+20885049 | MS.gene068024:CDS |
| TATATTGATACTGTGAGACA+AGG | 0.681648 | 4.3:+20885699 | MS.gene068024:CDS |
| GCTAGATAATCTGCCCACAG+AGG | 0.689544 | 4.3:+20884868 | MS.gene068024:CDS |
| GTGCATATGTTACCACGGGG+AGG | 0.701876 | 4.3:-20885061 | None:intergenic |
| ATATTTCGAGAACCATCGAG+GGG | 0.721395 | 4.3:-20884791 | None:intergenic |
| AAACCCTCTTAGTTTCATCG+TGG | 0.730924 | 4.3:+20885851 | MS.gene068024:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATATCTATCAAATT+AGG | - | chr4.3:20885135-20885154 | None:intergenic | 10.0% |
| !!! | CTATACAATATTTTTATATT+TGG | - | chr4.3:20883982-20884001 | None:intergenic | 10.0% |
| !! | ACATTAATGCTTATAATTTA+AGG | + | chr4.3:20885253-20885272 | MS.gene068024:intron | 15.0% |
| !! | TATAAAAATAAACTGAAAAC+AGG | + | chr4.3:20885431-20885450 | MS.gene068024:intron | 15.0% |
| !! | TTTCTATTAGGTTTAAATAT+CGG | - | chr4.3:20884079-20884098 | None:intergenic | 15.0% |
| !!! | ATAAAAAACACTTTAAAAGT+CGG | + | chr4.3:20883790-20883809 | MS.gene068024:intron | 15.0% |
| !! | AACTCAATATAGCATAAATT+AGG | + | chr4.3:20883766-20883785 | MS.gene068024:intron | 20.0% |
| !! | ATATCAATGGTATAATTGAA+AGG | - | chr4.3:20883403-20883422 | None:intergenic | 20.0% |
| !! | GTTCTATTAATGTTGTTAAA+TGG | + | chr4.3:20884430-20884449 | MS.gene068024:intron | 20.0% |
| !! | TAACAAAACCCTTTATTAAA+AGG | + | chr4.3:20884603-20884622 | MS.gene068024:intron | 20.0% |
| !! | TATTAGAAAATAAGTCATCT+AGG | + | chr4.3:20883932-20883951 | MS.gene068024:intron | 20.0% |
| !! | TCTGTTATATTATCAAATGT+TGG | + | chr4.3:20885165-20885184 | MS.gene068024:intron | 20.0% |
| !! | TTAAGCTATTTATCAAGAAA+GGG | - | chr4.3:20885279-20885298 | None:intergenic | 20.0% |
| !! | TTCTATTAGGTTTAAATATC+GGG | - | chr4.3:20884078-20884097 | None:intergenic | 20.0% |
| !!! | CTCTTTTTCCTTTTAATAAA+GGG | - | chr4.3:20884614-20884633 | None:intergenic | 20.0% |
| !!! | TCTCTTTTTCCTTTTAATAA+AGG | - | chr4.3:20884615-20884634 | None:intergenic | 20.0% |
| !!! | TTCAAAATTTTGAGAATTGA+GGG | + | chr4.3:20884150-20884169 | MS.gene068024:intron | 20.0% |
| !!! | TTGATAATATAACAGAAGAT+AGG | - | chr4.3:20885161-20885180 | None:intergenic | 20.0% |
| !!! | TTTATTTTTATAAGCTCTTC+AGG | - | chr4.3:20885423-20885442 | None:intergenic | 20.0% |
| ! | AAAAAAATCATCCAAACTCA+TGG | - | chr4.3:20883503-20883522 | None:intergenic | 25.0% |
| ! | AAAGCCTCTTGATATTATAT+CGG | + | chr4.3:20883453-20883472 | MS.gene068024:CDS | 25.0% |
| ! | AATAGAACAGTTTGTCATAA+TGG | - | chr4.3:20884418-20884437 | None:intergenic | 25.0% |
| ! | GTAAGTTATATGAAAACACA+AGG | - | chr4.3:20884111-20884130 | None:intergenic | 25.0% |
| ! | GTTAAGCTATTTATCAAGAA+AGG | - | chr4.3:20885280-20885299 | None:intergenic | 25.0% |
| ! | TGTTCTACAACTTAGATATA+CGG | - | chr4.3:20884249-20884268 | None:intergenic | 25.0% |
| !! | AGGATGAATCATTTTCTATT+AGG | - | chr4.3:20884091-20884110 | None:intergenic | 25.0% |
| !! | GTTTGTCATAATGGAAATAT+AGG | - | chr4.3:20884409-20884428 | None:intergenic | 25.0% |
| !! | TAAGGCTAATTTTCTTTCAT+TGG | + | chr4.3:20885200-20885219 | MS.gene068024:intron | 25.0% |
| !! | TTACATTAATTTTCGATGAG+TGG | - | chr4.3:20884220-20884239 | None:intergenic | 25.0% |
| !! | TTTGTGTGTTGTTGTTAATT+GGG | + | chr4.3:20883571-20883590 | MS.gene068024:intron | 25.0% |
| !! | TTTTGATCTTATGTCAGAAT+TGG | + | chr4.3:20884469-20884488 | MS.gene068024:intron | 25.0% |
| !!! | AATGTTGTTAAATGGATTGT+TGG | + | chr4.3:20884438-20884457 | MS.gene068024:intron | 25.0% |
| !!! | ATGATGCAAGATATTTTGAT+TGG | + | chr4.3:20885658-20885677 | MS.gene068024:CDS | 25.0% |
| !!! | ATGTTGTTAAATGGATTGTT+GGG | + | chr4.3:20884439-20884458 | MS.gene068024:intron | 25.0% |
| !!! | CTTCAAAATTTTGAGAATTG+AGG | + | chr4.3:20884149-20884168 | MS.gene068024:intron | 25.0% |
| !!! | TCAGTAATGGGTTTAAAAAT+AGG | - | chr4.3:20884496-20884515 | None:intergenic | 25.0% |
| AAAAGTAAATCCTGGTTATG+AGG | + | chr4.3:20886013-20886032 | MS.gene068024:CDS | 30.0% | |
| AAACTGTTTGGTTGAGTTTA+TGG | - | chr4.3:20885518-20885537 | None:intergenic | 30.0% | |
| AAATTACCTTTGTAACAAGC+TGG | + | chr4.3:20883874-20883893 | MS.gene068024:intron | 30.0% | |
| AAGAAAATGATACACCAACT+TGG | + | chr4.3:20884732-20884751 | MS.gene068024:CDS | 30.0% | |
| AATAAACTGAAAACAGGCTA+TGG | + | chr4.3:20885437-20885456 | MS.gene068024:intron | 30.0% | |
| AATTGGTGTGAATGATGATT+TGG | + | chr4.3:20883318-20883337 | MS.gene068024:CDS | 30.0% | |
| ACTAACCAAGACAATCAAAA+AGG | - | chr4.3:20883529-20883548 | None:intergenic | 30.0% | |
| AGAAAATAAGTCATCTAGGT+CGG | + | chr4.3:20883936-20883955 | MS.gene068024:intron | 30.0% | |
| ATATATTTCCTTAAGCCTTC+AGG | - | chr4.3:20885684-20885703 | None:intergenic | 30.0% | |
| ATTGGGAATCATGACAAAAT+CGG | + | chr4.3:20883588-20883607 | MS.gene068024:intron | 30.0% | |
| CAGTCAACAACATAAACTTA+GGG | - | chr4.3:20885599-20885618 | None:intergenic | 30.0% | |
| CTAACCAAGACAATCAAAAA+GGG | - | chr4.3:20883528-20883547 | None:intergenic | 30.0% | |
| CTAGCCATTATGTATGTAAA+AGG | + | chr4.3:20884562-20884581 | MS.gene068024:intron | 30.0% | |
| CTCTAACATAAGAGTTTCTA+AGG | - | chr4.3:20884322-20884341 | None:intergenic | 30.0% | |
| CTCTTAAGAAGAAGAATAAG+TGG | + | chr4.3:20883674-20883693 | MS.gene068024:intron | 30.0% | |
| GATATAATATCAAGAGGCTT+TGG | - | chr4.3:20883454-20883473 | None:intergenic | 30.0% | |
| GTACAACAAAAAGTAAATCC+TGG | + | chr4.3:20886005-20886024 | MS.gene068024:CDS | 30.0% | |
| GTTCTACAACTTAGATATAC+GGG | - | chr4.3:20884248-20884267 | None:intergenic | 30.0% | |
| TAGTATGGTACATCAGTAAT+GGG | - | chr4.3:20884508-20884527 | None:intergenic | 30.0% | |
| TATATTGATACTGTGAGACA+AGG | + | chr4.3:20885699-20885718 | MS.gene068024:CDS | 30.0% | |
| TCTATTGAATTCCATGAGTT+TGG | + | chr4.3:20883489-20883508 | MS.gene068024:intron | 30.0% | |
| TTAAAGTGCATATGTTACCA+CGG | - | chr4.3:20885069-20885088 | None:intergenic | 30.0% | |
| TTCTACAACTTAGATATACG+GGG | - | chr4.3:20884247-20884266 | None:intergenic | 30.0% | |
| TTGTCATCACTTCAAAAATC+TGG | + | chr4.3:20884686-20884705 | MS.gene068024:CDS | 30.0% | |
| TTGTTACAAAGGTAATTTGG+TGG | - | chr4.3:20883872-20883891 | None:intergenic | 30.0% | |
| TTTCATTCTGCAATAATGCA+TGG | - | chr4.3:20884661-20884680 | None:intergenic | 30.0% | |
| TTTCCACTGAAAACAACTTA+TGG | + | chr4.3:20885474-20885493 | MS.gene068024:intron | 30.0% | |
| ! | AAAGACTTCCTCTCTTTTTA+GGG | + | chr4.3:20885943-20885962 | MS.gene068024:CDS | 30.0% |
| ! | AAGAAAAGGGTTGGAATTTT+TGG | - | chr4.3:20883166-20883185 | None:intergenic | 30.0% |
| ! | ACAGCCTTTTACATACATAA+TGG | - | chr4.3:20884569-20884588 | None:intergenic | 30.0% |
| ! | ATACCAACTGGTACAATTTT+CGG | + | chr4.3:20884824-20884843 | MS.gene068024:CDS | 30.0% |
| ! | GTTTGTGTGTTGTTGTTAAT+TGG | + | chr4.3:20883570-20883589 | MS.gene068024:intron | 30.0% |
| ! | TTTTTGTCAAGTAGCCAAAA+TGG | + | chr4.3:20883642-20883661 | MS.gene068024:intron | 30.0% |
| !! | AGCTTGTTACAAAGGTAATT+TGG | - | chr4.3:20883875-20883894 | None:intergenic | 30.0% |
| !! | TCAAAATTTTGAAGACCCTT+GGG | - | chr4.3:20884143-20884162 | None:intergenic | 30.0% |
| !! | TTTTCCCTTTTTGATTGTCT+TGG | + | chr4.3:20883521-20883540 | MS.gene068024:intron | 30.0% |
| !!! | AAGAATCCTACTTTTTCCAT+CGG | - | chr4.3:20885898-20885917 | None:intergenic | 30.0% |
| !!! | AAGAGAATTTCTAGCCATTT+TGG | - | chr4.3:20883659-20883678 | None:intergenic | 30.0% |
| AATATTTCGAGAACCATCGA+GGG | - | chr4.3:20884795-20884814 | None:intergenic | 35.0% | |
| ACCACTATTTGGCATATCAA+TGG | - | chr4.3:20883416-20883435 | None:intergenic | 35.0% | |
| ACCATTGATATGCCAAATAG+TGG | + | chr4.3:20883412-20883431 | MS.gene068024:CDS | 35.0% | |
| ACTATACTCTGCATTACCTT+TGG | + | chr4.3:20884965-20884984 | MS.gene068024:CDS | 35.0% | |
| ACTGATGCACAGATAGAAAT+AGG | - | chr4.3:20884193-20884212 | None:intergenic | 35.0% | |
| ATACCGAAAATTGTACCAGT+TGG | - | chr4.3:20884830-20884849 | None:intergenic | 35.0% | |
| ATGGAAGAGTTGGAAAGTTA+TGG | + | chr4.3:20885978-20885997 | MS.gene068024:CDS | 35.0% | |
| ATTCACTCCAAAGTGGAAAT+AGG | + | chr4.3:20884906-20884925 | MS.gene068024:CDS | 35.0% | |
| ATTCTGCAATAATGCATGGT+GGG | - | chr4.3:20884657-20884676 | None:intergenic | 35.0% | |
| CACACCGATATAATATCAAG+AGG | - | chr4.3:20883460-20883479 | None:intergenic | 35.0% | |
| CATAAACTTAGGGACTGTAT+AGG | - | chr4.3:20885589-20885608 | None:intergenic | 35.0% | |
| CATTGTTGGAGTGAAGAAAA+GGG | - | chr4.3:20883179-20883198 | None:intergenic | 35.0% | |
| CTAAAAAGAGAGGAAGTCTT+TGG | - | chr4.3:20885944-20885963 | None:intergenic | 35.0% | |
| CTAGTATGGTACATCAGTAA+TGG | - | chr4.3:20884509-20884528 | None:intergenic | 35.0% | |
| CTCACAAATGTTCATGTCTA+CGG | + | chr4.3:20885543-20885562 | MS.gene068024:intron | 35.0% | |
| CTTATGTTAGAGTGTGTTGA+AGG | + | chr4.3:20884330-20884349 | MS.gene068024:intron | 35.0% | |
| CTTCATAAACAAGACGAAGA+TGG | - | chr4.3:20885830-20885849 | None:intergenic | 35.0% | |
| GCAGTCAACAACATAAACTT+AGG | - | chr4.3:20885600-20885619 | None:intergenic | 35.0% | |
| GTAAAACCACTATCAGTCTT+AGG | + | chr4.3:20883214-20883233 | MS.gene068024:CDS | 35.0% | |
| GTCAACATTCAAGACTAGTA+TGG | - | chr4.3:20884523-20884542 | None:intergenic | 35.0% | |
| GTTACATTGATGGAGTATGT+AGG | + | chr4.3:20883283-20883302 | MS.gene068024:CDS | 35.0% | |
| TAAAGTGCATATGTTACCAC+GGG | - | chr4.3:20885068-20885087 | None:intergenic | 35.0% | |
| TGGCCTAATTCAACTATACA+AGG | - | chr4.3:20883962-20883981 | None:intergenic | 35.0% | |
| TGGGTAGGAACATATATACA+GGG | - | chr4.3:20883722-20883741 | None:intergenic | 35.0% | |
| TTCAAACTCCCTAAAAAGAG+AGG | - | chr4.3:20885954-20885973 | None:intergenic | 35.0% | |
| TTGATGGAGTATGTAGGTAA+AGG | + | chr4.3:20883289-20883308 | MS.gene068024:CDS | 35.0% | |
| TTGTGAGTTGTGAAACTGTT+TGG | - | chr4.3:20885530-20885549 | None:intergenic | 35.0% | |
| TTTAGGGAGTTTGAAAGACA+TGG | + | chr4.3:20885959-20885978 | MS.gene068024:CDS | 35.0% | |
| TTTGAAAGACATGGAAGAGT+TGG | + | chr4.3:20885968-20885987 | MS.gene068024:CDS | 35.0% | |
| ! | CAAAGACTTCCTCTCTTTTT+AGG | + | chr4.3:20885942-20885961 | MS.gene068024:CDS | 35.0% |
| ! | GAAAATTGTACCAGTTGGTA+TGG | - | chr4.3:20884825-20884844 | None:intergenic | 35.0% |
| ! | TCCATCGAACTTTGTTGTAT+GGG | + | chr4.3:20885781-20885800 | MS.gene068024:CDS | 35.0% |
| !! | AAGGTGATGAGTTGATAGAA+GGG | - | chr4.3:20883118-20883137 | None:intergenic | 35.0% |
| !! | ACAAAACCAGCTTGTTACAA+AGG | - | chr4.3:20883883-20883902 | None:intergenic | 35.0% |
| !! | AGTCCATAAGTTGTTTTCAG+TGG | - | chr4.3:20885480-20885499 | None:intergenic | 35.0% |
| !! | CAAAATTTTGAAGACCCTTG+GGG | - | chr4.3:20884142-20884161 | None:intergenic | 35.0% |
| !! | CTCAAAATTTTGAAGACCCT+TGG | - | chr4.3:20884144-20884163 | None:intergenic | 35.0% |
| !! | TGTTGGAAGCATCTTACATA+AGG | + | chr4.3:20885182-20885201 | MS.gene068024:intron | 35.0% |
| !!! | AAAGGGTTGGAATTTTTGGT+TGG | - | chr4.3:20883162-20883181 | None:intergenic | 35.0% |
| !!! | AGATATTTTGATTGGCCTGA+AGG | + | chr4.3:20885666-20885685 | MS.gene068024:CDS | 35.0% |
| AAACCCTCTTAGTTTCATCG+TGG | + | chr4.3:20885851-20885870 | MS.gene068024:CDS | 40.0% | |
| AAAGTGCATATGTTACCACG+GGG | - | chr4.3:20885067-20885086 | None:intergenic | 40.0% | |
| AACTTACCAATTAAGCCCCA+AGG | + | chr4.3:20884124-20884143 | MS.gene068024:intron | 40.0% | |
| AACTTAGGGACTGTATAGGA+TGG | - | chr4.3:20885585-20885604 | None:intergenic | 40.0% | |
| ACTTACCAATTAAGCCCCAA+GGG | + | chr4.3:20884125-20884144 | MS.gene068024:intron | 40.0% | |
| ACTTTGTTGGATGACTCGAA+TGG | - | chr4.3:20884016-20884035 | None:intergenic | 40.0% | |
| AGAAGAATAAGTGGTGTGTC+AGG | + | chr4.3:20883683-20883702 | MS.gene068024:intron | 40.0% | |
| AGTGACGAGTATCACTTTGT+TGG | - | chr4.3:20884029-20884048 | None:intergenic | 40.0% | |
| ATACTCGTCACTCTACGAAT+TGG | + | chr4.3:20884037-20884056 | MS.gene068024:intron | 40.0% | |
| ATATTTCGAGAACCATCGAG+GGG | - | chr4.3:20884794-20884813 | None:intergenic | 40.0% | |
| ATCTGGAAAAGTTGCTGTCA+TGG | + | chr4.3:20884703-20884722 | MS.gene068024:CDS | 40.0% | |
| ATGGAGTATGTAGGTAAAGG+AGG | + | chr4.3:20883292-20883311 | MS.gene068024:CDS | 40.0% | |
| ATTGATGCATCCATACCAAC+TGG | + | chr4.3:20884812-20884831 | MS.gene068024:CDS | 40.0% | |
| CAACAGTAGCAAGTGATGAT+GGG | + | chr4.3:20883257-20883276 | MS.gene068024:CDS | 40.0% | |
| CAATATTTCGAGAACCATCG+AGG | - | chr4.3:20884796-20884815 | None:intergenic | 40.0% | |
| CATTCTGCAATAATGCATGG+TGG | - | chr4.3:20884658-20884677 | None:intergenic | 40.0% | |
| CCAACTTGGATAAGTGATGA+TGG | + | chr4.3:20884746-20884765 | MS.gene068024:CDS | 40.0% | |
| CCATCATCACTTATCCAAGT+TGG | - | chr4.3:20884749-20884768 | None:intergenic | 40.0% | |
| CCATTGTTGGAGTGAAGAAA+AGG | - | chr4.3:20883180-20883199 | None:intergenic | 40.0% | |
| CGGTATTTATAAACGCCTTG+AGG | + | chr4.3:20884844-20884863 | MS.gene068024:CDS | 40.0% | |
| CTATCAGCCTATTTCCACTT+TGG | - | chr4.3:20884916-20884935 | None:intergenic | 40.0% | |
| CTTGTTACTGAAGCCATTGT+TGG | - | chr4.3:20883193-20883212 | None:intergenic | 40.0% | |
| GAAGAATAAGTGGTGTGTCA+GGG | + | chr4.3:20883684-20883703 | MS.gene068024:intron | 40.0% | |
| GAATGAAGTCTCCTGTTGAA+CGG | - | chr4.3:20885018-20885037 | None:intergenic | 40.0% | |
| GATACTGTGAGACAAGGAAA+AGG | + | chr4.3:20885705-20885724 | MS.gene068024:CDS | 40.0% | |
| GGGTAGGAACATATATACAG+GGG | - | chr4.3:20883721-20883740 | None:intergenic | 40.0% | |
| GTGGGTAGGAACATATATAC+AGG | - | chr4.3:20883723-20883742 | None:intergenic | 40.0% | |
| TCAACAGTAGCAAGTGATGA+TGG | + | chr4.3:20883256-20883275 | MS.gene068024:CDS | 40.0% | |
| TCCCTATCAGAACCACTATT+TGG | - | chr4.3:20883427-20883446 | None:intergenic | 40.0% | |
| TTCTGCAATAATGCATGGTG+GGG | - | chr4.3:20884656-20884675 | None:intergenic | 40.0% | |
| TTGCTGAATTCACTCCAAAG+TGG | + | chr4.3:20884899-20884918 | MS.gene068024:CDS | 40.0% | |
| ! | AGTCTTTGGTGCAGTTTAAC+TGG | - | chr4.3:20885930-20885949 | None:intergenic | 40.0% |
| ! | CATCGAACTTTGTTGTATGG+GGG | + | chr4.3:20885783-20885802 | MS.gene068024:CDS | 40.0% |
| ! | CCATCGAACTTTGTTGTATG+GGG | + | chr4.3:20885782-20885801 | MS.gene068024:CDS | 40.0% |
| ! | CCTTTTCTTCACTCCAACAA+TGG | + | chr4.3:20883177-20883196 | MS.gene068024:CDS | 40.0% |
| ! | CGGCCTTGTATAGTTGAATT+AGG | + | chr4.3:20883956-20883975 | MS.gene068024:intron | 40.0% |
| ! | CTCCATCGAACTTTGTTGTA+TGG | + | chr4.3:20885780-20885799 | MS.gene068024:CDS | 40.0% |
| ! | GAAGTACCTAAGACTGATAG+TGG | - | chr4.3:20883223-20883242 | None:intergenic | 40.0% |
| ! | GGAAAGTTTGAAGCTTTGGT+CGG | - | chr4.3:20883141-20883160 | None:intergenic | 40.0% |
| ! | GGTTGGAAAGTTTGAAGCTT+TGG | - | chr4.3:20883145-20883164 | None:intergenic | 40.0% |
| ! | TACCTTGCAGAGTACTTCTT+AGG | - | chr4.3:20885738-20885757 | None:intergenic | 40.0% |
| ! | TGATGGGTCTGTTACATTGA+TGG | + | chr4.3:20883273-20883292 | MS.gene068024:CDS | 40.0% |
| ! | TGCTACTGTTGATGAAGATG+AGG | - | chr4.3:20883248-20883267 | None:intergenic | 40.0% |
| !! | AAGTGATGATGGTCCATATG+TGG | + | chr4.3:20884757-20884776 | MS.gene068024:CDS | 40.0% |
| !! | ATCCTAAGAAGTACTCTGCA+AGG | + | chr4.3:20885733-20885752 | MS.gene068024:CDS | 40.0% |
| !! | GAAGGTGATGAGTTGATAGA+AGG | - | chr4.3:20883119-20883138 | None:intergenic | 40.0% |
| !! | GCCAAATAGTGGTTCTGATA+GGG | + | chr4.3:20883423-20883442 | MS.gene068024:CDS | 40.0% |
| !! | TGCCAAATAGTGGTTCTGAT+AGG | + | chr4.3:20883422-20883441 | MS.gene068024:CDS | 40.0% |
| !!! | ACAAGCTGGTTTTGTAGAGA+TGG | + | chr4.3:20883888-20883907 | MS.gene068024:intron | 40.0% |
| !!! | CAAGCTGGTTTTGTAGAGAT+GGG | + | chr4.3:20883889-20883908 | MS.gene068024:intron | 40.0% |
| !!! | CTCTCTTGTTTTGTCACTCA+GGG | + | chr4.3:20885619-20885638 | MS.gene068024:intron | 40.0% |
| AGCATTAAAATTCCTCCCCG+TGG | + | chr4.3:20885049-20885068 | MS.gene068024:CDS | 45.0% | |
| CCCCATACAACAAAGTTCGA+TGG | - | chr4.3:20885785-20885804 | None:intergenic | 45.0% | |
| GAGGATCCGATGGAAAAAGT+AGG | + | chr4.3:20885889-20885908 | MS.gene068024:CDS | 45.0% | |
| GAGTATGTAGGTAAAGGAGG+TGG | + | chr4.3:20883295-20883314 | MS.gene068024:CDS | 45.0% | |
| GCTCCACGATGAAACTAAGA+GGG | - | chr4.3:20885857-20885876 | None:intergenic | 45.0% | |
| GGAAATAGGCTGATAGCTTC+TGG | + | chr4.3:20884920-20884939 | MS.gene068024:CDS | 45.0% | |
| GGGAATCATGACAAAATCGG+TGG | + | chr4.3:20883591-20883610 | MS.gene068024:intron | 45.0% | |
| GTAGGTAAAGGAGGTGGAAT+TGG | + | chr4.3:20883301-20883320 | MS.gene068024:CDS | 45.0% | |
| GTTGGAGTGAAGAAAAGGGT+TGG | - | chr4.3:20883175-20883194 | None:intergenic | 45.0% | |
| TGCTCCACGATGAAACTAAG+AGG | - | chr4.3:20885858-20885877 | None:intergenic | 45.0% | |
| ! | AACTTTGTTGTATGGGGGTG+TGG | + | chr4.3:20885788-20885807 | MS.gene068024:CDS | 45.0% |
| ! | AGTTTGAAGCTTTGGTCGGA+AGG | - | chr4.3:20883137-20883156 | None:intergenic | 45.0% |
| ! | GCAGATTATCTAGCTCCTCA+AGG | - | chr4.3:20884862-20884881 | None:intergenic | 45.0% |
| !! | CGGGGAGGAATTTTAATGCT+TGG | - | chr4.3:20885049-20885068 | None:intergenic | 45.0% |
| !! | TCTGCATTACCTTTGGCTCT+GGG | + | chr4.3:20884972-20884991 | MS.gene068024:CDS | 45.0% |
| !! | TTGATTGGCCTGAAGGCTTA+AGG | + | chr4.3:20885673-20885692 | MS.gene068024:CDS | 45.0% |
| !!! | GCTCTCTTGTTTTGTCACTC+AGG | + | chr4.3:20885618-20885637 | MS.gene068024:intron | 45.0% |
| ACAAGACGAAGATGGTCCCT+CGG | - | chr4.3:20885822-20885841 | None:intergenic | 50.0% | |
| AGCAAAGCCTTCTCCTCTGT+GGG | - | chr4.3:20884884-20884903 | None:intergenic | 50.0% | |
| AGTTTCATCGTGGAGCAAGC+TGG | + | chr4.3:20885861-20885880 | MS.gene068024:CDS | 50.0% | |
| GAAGACCCTTGGGGCTTAAT+TGG | - | chr4.3:20884133-20884152 | None:intergenic | 50.0% | |
| GCTAGATAATCTGCCCACAG+AGG | + | chr4.3:20884868-20884887 | MS.gene068024:CDS | 50.0% | |
| GGATCTGTCACGACCACATA+TGG | - | chr4.3:20884773-20884792 | None:intergenic | 50.0% | |
| TAATCTGCCCACAGAGGAGA+AGG | + | chr4.3:20884874-20884893 | MS.gene068024:CDS | 50.0% | |
| TACCCACTGAGCTAAGCTCA+CGG | + | chr4.3:20883736-20883755 | MS.gene068024:intron | 50.0% | |
| TTCACTCTCGACCGTTCAAC+AGG | + | chr4.3:20885004-20885023 | MS.gene068024:CDS | 50.0% | |
| ! | CTCTGCATTACCTTTGGCTC+TGG | + | chr4.3:20884971-20884990 | MS.gene068024:CDS | 50.0% |
| ACCCACTGAGCTAAGCTCAC+GGG | + | chr4.3:20883737-20883756 | MS.gene068024:intron | 55.0% | |
| CAGCAAAGCCTTCTCCTCTG+TGG | - | chr4.3:20884885-20884904 | None:intergenic | 55.0% | |
| GGTGTGTCAGGGTTCGAACT+CGG | + | chr4.3:20883695-20883714 | MS.gene068024:intron | 55.0% | |
| GTGAGCTTAGCTCAGTGGGT+AGG | - | chr4.3:20883737-20883756 | None:intergenic | 55.0% | |
| GTGCATATGTTACCACGGGG+AGG | - | chr4.3:20885064-20885083 | None:intergenic | 55.0% | |
| TCATCGTGGAGCAAGCTGGT+GGG | + | chr4.3:20885865-20885884 | MS.gene068024:CDS | 55.0% | |
| TGCATGTGTCCCAGAGCCAA+AGG | - | chr4.3:20884984-20885003 | None:intergenic | 55.0% | |
| TTCATCGTGGAGCAAGCTGG+TGG | + | chr4.3:20885864-20885883 | MS.gene068024:CDS | 55.0% | |
| CCCACTGAGCTAAGCTCACG+GGG | + | chr4.3:20883738-20883757 | MS.gene068024:intron | 60.0% | |
| CCCCGTGAGCTTAGCTCAGT+GGG | - | chr4.3:20883741-20883760 | None:intergenic | 60.0% | |
| GGGTGTGGCGATGAATCCGA+GGG | + | chr4.3:20885803-20885822 | MS.gene068024:CDS | 60.0% | |
| GTCGTGACAGATCCCCTCGA+TGG | + | chr4.3:20884779-20884798 | MS.gene068024:CDS | 60.0% | |
| TCCCCGTGAGCTTAGCTCAG+TGG | - | chr4.3:20883742-20883761 | None:intergenic | 60.0% | |
| GCTGGTGGGAGAGGATCCGA+TGG | + | chr4.3:20885879-20885898 | MS.gene068024:CDS | 65.0% | |
| GGGGTGTGGCGATGAATCCG+AGG | + | chr4.3:20885802-20885821 | MS.gene068024:CDS | 65.0% | |
| GTGGAGCAAGCTGGTGGGAG+AGG | + | chr4.3:20885870-20885889 | MS.gene068024:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 20883091 | 20886040 | 20883091 | ID=MS.gene068024 |
| chr4.3 | mRNA | 20883091 | 20886040 | 20883091 | ID=MS.gene068024.t1;Parent=MS.gene068024 |
| chr4.3 | exon | 20883091 | 20883474 | 20883091 | ID=MS.gene068024.t1.exon1;Parent=MS.gene068024.t1 |
| chr4.3 | CDS | 20883091 | 20883474 | 20883091 | ID=cds.MS.gene068024.t1;Parent=MS.gene068024.t1 |
| chr4.3 | exon | 20884674 | 20885070 | 20884674 | ID=MS.gene068024.t1.exon2;Parent=MS.gene068024.t1 |
| chr4.3 | CDS | 20884674 | 20885070 | 20884674 | ID=cds.MS.gene068024.t1;Parent=MS.gene068024.t1 |
| chr4.3 | exon | 20885640 | 20886040 | 20885640 | ID=MS.gene068024.t1.exon3;Parent=MS.gene068024.t1 |
| chr4.3 | CDS | 20885640 | 20886040 | 20885640 | ID=cds.MS.gene068024.t1;Parent=MS.gene068024.t1 |
| Gene Sequence |
| Protein sequence |
