Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21030.t1 | XP_013469071.1 | 95.7 | 529 | 19 | 2 | 46 | 573 | 62 | 587 | 1.70E-274 | 954.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21030.t1 | Q8W4E7 | 63.6 | 566 | 196 | 4 | 13 | 571 | 33 | 595 | 2.1e-188 | 660.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21030.t1 | A0A072VM68 | 95.7 | 529 | 19 | 2 | 46 | 573 | 62 | 587 | 1.2e-274 | 954.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene21030 | 0.817378 | 3.40E-52 | -1.69E-46 |
| MS.gene049171 | MS.gene21030 | 0.82708 | 1.91E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene21030 | 0.840829 | 6.87E-58 | -1.69E-46 |
| MS.gene049257 | MS.gene21030 | 0.825299 | 5.06E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene21030 | 0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene21030 | 0.805512 | 1.29E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene21030 | 0.844413 | 7.68E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene21030 | 0.834873 | 2.33E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene21030 | 0.816197 | 6.26E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene21030 | 0.81637 | 5.73E-52 | -1.69E-46 |
| MS.gene050400 | MS.gene21030 | 0.81427 | 1.68E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene21030 | 0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene050553 | MS.gene21030 | 0.804933 | 1.70E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene21030 | 0.871091 | 8.90E-67 | -1.69E-46 |
| MS.gene050647 | MS.gene21030 | -0.822062 | 2.90E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene21030 | 0.86125 | 1.17E-63 | -1.69E-46 |
| MS.gene050675 | MS.gene21030 | 0.807226 | 5.61E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene21030 | 0.855326 | 6.80E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene21030 | 0.837881 | 4.00E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene21030 | 0.842729 | 2.16E-58 | -1.69E-46 |
| MS.gene050812 | MS.gene21030 | 0.837693 | 4.47E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene21030 | 0.842996 | 1.84E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene21030 | 0.821204 | 4.57E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene21030 | 0.855084 | 8.00E-62 | -1.69E-46 |
| MS.gene05105 | MS.gene21030 | 0.856459 | 3.17E-62 | -1.69E-46 |
| MS.gene051387 | MS.gene21030 | 0.846267 | 2.42E-59 | -1.69E-46 |
| MS.gene051525 | MS.gene21030 | 0.845091 | 5.04E-59 | -1.69E-46 |
| MS.gene051617 | MS.gene21030 | 0.8005 | 1.40E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene21030 | 0.812648 | 3.81E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene21030 | 0.847359 | 1.22E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene21030 | 0.851112 | 1.10E-60 | -1.69E-46 |
| MS.gene051874 | MS.gene21030 | 0.811315 | 7.45E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene21030 | 0.839115 | 1.92E-57 | -1.69E-46 |
| MS.gene052134 | MS.gene21030 | 0.801486 | 8.80E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene21030 | 0.814752 | 1.31E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene21030 | 0.831723 | 1.42E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene21030 | 0.836699 | 8.03E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene21030 | 0.815005 | 1.15E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene21030 | 0.837 | 6.73E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene21030 | 0.801216 | 1.00E-48 | -1.69E-46 |
| MS.gene052484 | MS.gene21030 | 0.806192 | 9.27E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene21030 | 0.845226 | 4.64E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene21030 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene21030 | 0.839175 | 1.85E-57 | -1.69E-46 |
| MS.gene052823 | MS.gene21030 | 0.818539 | 1.86E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene21030 | 0.817256 | 3.62E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene21030 | 0.820323 | 7.29E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene21030 | 0.827732 | 1.33E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene21030 | 0.837159 | 6.13E-57 | -1.69E-46 |
| MS.gene052982 | MS.gene21030 | 0.814929 | 1.20E-51 | -1.69E-46 |
| MS.gene053107 | MS.gene21030 | 0.818507 | 1.89E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene21030 | 0.819257 | 1.28E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene21030 | 0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene21030 | 0.802823 | 4.67E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene21030 | 0.810467 | 1.14E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene21030 | 0.83076 | 2.45E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene21030 | 0.842086 | 3.21E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene21030 | 0.858974 | 5.70E-63 | -1.69E-46 |
| MS.gene053912 | MS.gene21030 | 0.81082 | 9.53E-51 | -1.69E-46 |
| MS.gene054107 | MS.gene21030 | 0.801726 | 7.86E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene21030 | 0.810843 | 9.42E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene21030 | -0.853266 | 2.68E-61 | -1.69E-46 |
| MS.gene054927 | MS.gene21030 | 0.821351 | 4.23E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene21030 | 0.81048 | 1.13E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene21030 | 0.808922 | 2.44E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene21030 | 0.807802 | 4.23E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene21030 | 0.822956 | 1.79E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene21030 | 0.836327 | 9.98E-57 | -1.69E-46 |
| MS.gene055289 | MS.gene21030 | 0.81673 | 4.76E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene21030 | 0.807899 | 4.03E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene21030 | 0.893568 | 5.57E-75 | -1.69E-46 |
| MS.gene05553 | MS.gene21030 | 0.807022 | 6.19E-50 | -1.69E-46 |
| MS.gene05556 | MS.gene21030 | 0.813359 | 2.66E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene21030 | 0.8305 | 2.84E-55 | -1.69E-46 |
| MS.gene055605 | MS.gene21030 | 0.800934 | 1.14E-48 | -1.69E-46 |
| MS.gene055741 | MS.gene21030 | 0.888801 | 4.28E-73 | -1.69E-46 |
| MS.gene055744 | MS.gene21030 | 0.884381 | 2.01E-71 | -1.69E-46 |
| MS.gene055748 | MS.gene21030 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene21030 | 0.810124 | 1.35E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene21030 | 0.801687 | 8.00E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene21030 | 0.82981 | 4.18E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene21030 | 0.809479 | 1.85E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene21030 | 0.814627 | 1.40E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene21030 | 0.833684 | 4.63E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene21030 | 0.849617 | 2.88E-60 | -1.69E-46 |
| MS.gene056504 | MS.gene21030 | 0.802792 | 4.74E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene21030 | 0.815869 | 7.41E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene21030 | 0.810999 | 8.72E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene21030 | 0.812424 | 4.27E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene21030 | 0.853347 | 2.54E-61 | -1.69E-46 |
| MS.gene057019 | MS.gene21030 | 0.847308 | 1.26E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene21030 | 0.855617 | 5.59E-62 | -1.69E-46 |
| MS.gene057124 | MS.gene21030 | 0.81221 | 4.75E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene21030 | 0.821346 | 4.24E-53 | -1.69E-46 |
| MS.gene057332 | MS.gene21030 | 0.842689 | 2.22E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene21030 | 0.817284 | 3.57E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene21030 | 0.832141 | 1.12E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene21030 | 0.843082 | 1.74E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene21030 | 0.835895 | 1.29E-56 | -1.69E-46 |
| MS.gene057856 | MS.gene21030 | 0.80325 | 3.81E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene21030 | 0.842259 | 2.88E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene21030 | 0.83797 | 3.80E-57 | -1.69E-46 |
| MS.gene058090 | MS.gene21030 | 0.809306 | 2.02E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene21030 | 0.851403 | 9.08E-61 | -1.69E-46 |
| MS.gene058338 | MS.gene21030 | 0.833421 | 5.38E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene21030 | 0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene21030 | 0.857024 | 2.16E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene21030 | 0.806924 | 6.49E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene21030 | 0.854061 | 1.58E-61 | -1.69E-46 |
| MS.gene058544 | MS.gene21030 | 0.809506 | 1.83E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene21030 | 0.885558 | 7.33E-72 | -1.69E-46 |
| MS.gene058838 | MS.gene21030 | 0.843942 | 1.03E-58 | -1.69E-46 |
| MS.gene058948 | MS.gene21030 | 0.817471 | 3.24E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene21030 | 0.861302 | 1.13E-63 | -1.69E-46 |
| MS.gene05934 | MS.gene21030 | 0.847106 | 1.43E-59 | -1.69E-46 |
| MS.gene059455 | MS.gene21030 | 0.825005 | 5.93E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene21030 | 0.825137 | 5.52E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene21030 | 0.812905 | 3.35E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene21030 | 0.806475 | 8.08E-50 | -1.69E-46 |
| MS.gene059756 | MS.gene21030 | 0.801175 | 1.02E-48 | -1.69E-46 |
| MS.gene059801 | MS.gene21030 | 0.813088 | 3.06E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene21030 | 0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene060372 | MS.gene21030 | 0.833205 | 6.10E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene21030 | 0.805598 | 1.24E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene21030 | 0.812772 | 3.58E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene21030 | 0.851968 | 6.28E-61 | -1.69E-46 |
| MS.gene060837 | MS.gene21030 | 0.813831 | 2.10E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene21030 | 0.834071 | 3.71E-56 | -1.69E-46 |
| MS.gene06097 | MS.gene21030 | 0.811846 | 5.71E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene21030 | 0.816769 | 4.66E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene21030 | 0.80453 | 2.07E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene21030 | 0.863675 | 2.10E-64 | -1.69E-46 |
| MS.gene061231 | MS.gene21030 | 0.858647 | 7.13E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21030.t1 | MTR_1g084140 | 89.501 | 581 | 45 | 5 | 3 | 573 | 13 | 587 | 0.0 | 983 |
| MS.gene21030.t1 | MTR_4g013240 | 25.676 | 444 | 277 | 13 | 148 | 553 | 52 | 480 | 6.43e-23 | 102 |
| MS.gene21030.t1 | MTR_4g013245 | 23.753 | 421 | 269 | 13 | 148 | 531 | 11 | 416 | 3.47e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21030.t1 | AT5G26820 | 63.604 | 566 | 196 | 4 | 13 | 571 | 33 | 595 | 0.0 | 698 |
| MS.gene21030.t1 | AT5G03570 | 23.614 | 487 | 319 | 13 | 100 | 545 | 5 | 479 | 1.45e-19 | 92.4 |
| MS.gene21030.t1 | AT5G03570 | 23.614 | 487 | 319 | 13 | 100 | 545 | 5 | 479 | 1.45e-19 | 92.4 |
| MS.gene21030.t1 | AT5G03570 | 23.853 | 436 | 283 | 10 | 142 | 545 | 16 | 434 | 1.88e-18 | 89.0 |
| MS.gene21030.t1 | AT5G03570 | 22.266 | 512 | 321 | 13 | 100 | 545 | 5 | 505 | 9.65e-17 | 84.0 |
Find 131 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATTACAGGATGAAATT+TGG | 0.168385 | 1.4:-68896201 | None:intergenic |
| GCAAACGATCCTTCTCATTT+TGG | 0.171545 | 1.4:+68898867 | MS.gene21030:CDS |
| AAGCTTTGTGGTGTGGCTTT+GGG | 0.232750 | 1.4:+68895726 | MS.gene21030:CDS |
| TCCCTTGGTTGGCAAATTAA+TGG | 0.247945 | 1.4:+68895457 | MS.gene21030:CDS |
| TCGACTCTGGTCAAGCAATT+TGG | 0.274301 | 1.4:+68897073 | MS.gene21030:CDS |
| GAAGCTTTGTGGTGTGGCTT+TGG | 0.281406 | 1.4:+68895725 | MS.gene21030:CDS |
| TAAAATCAATACTGATATTC+TGG | 0.298842 | 1.4:+68894498 | MS.gene21030:CDS |
| GCACACCCTGCTGGGTTATA+TGG | 0.319471 | 1.4:+68894714 | MS.gene21030:CDS |
| GCGTCCATGGTTTGTCGTAT+TGG | 0.321719 | 1.4:+68895683 | MS.gene21030:CDS |
| GCTACTCCGGCACACCCTGC+TGG | 0.330733 | 1.4:+68894705 | MS.gene21030:CDS |
| GGTGAAATGGATGAGATTAA+AGG | 0.336046 | 1.4:-68894172 | None:intergenic |
| CACAGCTGACAGGAGTTAAT+AGG | 0.336528 | 1.4:+68895866 | MS.gene21030:intron |
| AACAGAGAACTTACTGTAAC+AGG | 0.338783 | 1.4:-68896260 | None:intergenic |
| TAACTACTTAACTGTCATTC+AGG | 0.341515 | 1.4:+68895505 | MS.gene21030:CDS |
| CCAGGCTGGGGCAGTTGGGT+TGG | 0.341613 | 1.4:+68897203 | MS.gene21030:intron |
| CAACAGGTTTGTGATGGTTT+AGG | 0.341872 | 1.4:-68896417 | None:intergenic |
| ATCTGCTTAAAAGTTGCTTC+TGG | 0.348836 | 1.4:+68896218 | MS.gene21030:CDS |
| AGAAGTTGCTGTTGCAAGTC+TGG | 0.361361 | 1.4:+68898812 | MS.gene21030:CDS |
| GGGGCGCAAATTATCCAAAC+TGG | 0.362063 | 1.4:+68898753 | MS.gene21030:CDS |
| GGGTTGCAAATGAGCGTGAC+TGG | 0.367569 | 1.4:+68895748 | MS.gene21030:CDS |
| ATGCAGGAACTCTCGGTAAA+TGG | 0.371611 | 1.4:-68895481 | None:intergenic |
| CTCTTGCCAGTTGCTGTGGT+GGG | 0.374283 | 1.4:+68895401 | MS.gene21030:CDS |
| TCCATCATTGGAGGATTTAG+TGG | 0.389879 | 1.4:+68897010 | MS.gene21030:CDS |
| TTTGTCGTATTGGTTTCAGC+TGG | 0.397742 | 1.4:+68895693 | MS.gene21030:CDS |
| ACAAGAAACGAGGACAACTA+TGG | 0.398430 | 1.4:+68894134 | MS.gene21030:CDS |
| TGAGTTGGACGAAACCTAAC+TGG | 0.405581 | 1.4:+68894080 | MS.gene21030:CDS |
| AAGAAACCCACCACAGCAAC+TGG | 0.408080 | 1.4:-68895407 | None:intergenic |
| CTACATTGCTTCTGCGTCCA+TGG | 0.410181 | 1.4:+68895670 | MS.gene21030:CDS |
| AACATTCGTGTCTTCGACTC+TGG | 0.414974 | 1.4:+68897060 | MS.gene21030:CDS |
| TGGATGATGGGATCCCAGTT+TGG | 0.424363 | 1.4:-68898767 | None:intergenic |
| ATAGCTGGAGCATTGCTGTT+TGG | 0.430015 | 1.4:+68896167 | MS.gene21030:CDS |
| TGGTGGAAAACCAGTTGTTA+AGG | 0.430182 | 1.4:+68896552 | MS.gene21030:intron |
| ACTAAAGTGGCTATAATTGT+TGG | 0.430851 | 1.4:+68895431 | MS.gene21030:CDS |
| ATGAGATTTGCTTTGGATGA+TGG | 0.434327 | 1.4:-68898780 | None:intergenic |
| AGTTGCTTCTGGCTTAATGA+TGG | 0.436477 | 1.4:+68896229 | MS.gene21030:CDS |
| CAGGATGAAATTTGGAAAGA+AGG | 0.437395 | 1.4:-68896193 | None:intergenic |
| CTTCAAGCTGTGGAACTTGA+AGG | 0.439189 | 1.4:-68894107 | None:intergenic |
| TTTGCTTGTGCAAGTGCGAC+TGG | 0.446486 | 1.4:-68895889 | None:intergenic |
| TATAATTGTTGGTGGTCCCT+TGG | 0.449655 | 1.4:+68895442 | MS.gene21030:CDS |
| CCTCTTGCCAGTTGCTGTGG+TGG | 0.452842 | 1.4:+68895400 | MS.gene21030:CDS |
| AGTCCCGATGAGATTTGCTT+TGG | 0.459197 | 1.4:-68898787 | None:intergenic |
| TTGTCGTATTGGTTTCAGCT+GGG | 0.460813 | 1.4:+68895694 | MS.gene21030:CDS |
| GGCTTACATCCATCCATCAT+TGG | 0.464689 | 1.4:+68896998 | MS.gene21030:intron |
| TTCATCGAATGATCTGCAAC+AGG | 0.464699 | 1.4:-68896433 | None:intergenic |
| AAGAAGGAGGAATGGTGAAA+TGG | 0.466110 | 1.4:-68894185 | None:intergenic |
| CAGCATGGATGTTCTGTAGA+TGG | 0.466645 | 1.4:+68898928 | MS.gene21030:CDS |
| AGCTTTGTGGTGTGGCTTTG+GGG | 0.469755 | 1.4:+68895727 | MS.gene21030:CDS |
| GGTGGAAAACCAGTTGTTAA+GGG | 0.471640 | 1.4:+68896553 | MS.gene21030:intron |
| GCATCAGATGCTGACAGTAT+AGG | 0.471700 | 1.4:+68896462 | MS.gene21030:CDS |
| GGGGCTATTGAGAAGCTTTG+TGG | 0.472566 | 1.4:+68895714 | MS.gene21030:CDS |
| TTTCTACCGGCGTTCTTGAC+CGG | 0.483139 | 1.4:+68896394 | MS.gene21030:CDS |
| TCCACTAAATCCTCCAATGA+TGG | 0.486598 | 1.4:-68897011 | None:intergenic |
| AAAACCAGTTGTTAAGGGTC+TGG | 0.491610 | 1.4:+68896558 | MS.gene21030:intron |
| AACTTGAAGGAAAACCAGTT+AGG | 0.492169 | 1.4:-68894094 | None:intergenic |
| TGAGATTTGCTTTGGATGAT+GGG | 0.493099 | 1.4:-68898779 | None:intergenic |
| CTCGGCTGGAAAGAGTATCT+TGG | 0.496656 | 1.4:+68896592 | MS.gene21030:CDS |
| GGTTTATTTCCACAGCTGAC+AGG | 0.500274 | 1.4:+68895856 | MS.gene21030:intron |
| CTACTCCGGCACACCCTGCT+GGG | 0.504482 | 1.4:+68894706 | MS.gene21030:CDS |
| TGGAAGCTATCAAGCTCGGC+TGG | 0.508035 | 1.4:+68896578 | MS.gene21030:CDS |
| CATCCAAAGCAAATCTCATC+GGG | 0.512204 | 1.4:+68898784 | MS.gene21030:CDS |
| ATTGTTGGTGGTCCCTTGGT+TGG | 0.518606 | 1.4:+68895446 | MS.gene21030:CDS |
| GCAATACTAGCAGGAAGGAC+TGG | 0.519217 | 1.4:-68896619 | None:intergenic |
| GGTGGGTTTCTTCACTAAAG+TGG | 0.522472 | 1.4:+68895418 | MS.gene21030:CDS |
| TCAAGCTTTATTTCTCAGCA+TGG | 0.524182 | 1.4:+68897230 | MS.gene21030:CDS |
| ATCCCACCATATAACCCAGC+AGG | 0.525279 | 1.4:-68894720 | None:intergenic |
| AAGCCTCTTGCCAGTTGCTG+TGG | 0.527013 | 1.4:+68895397 | MS.gene21030:CDS |
| TCTAATAAGACTGCATGAGT+TGG | 0.528023 | 1.4:+68894065 | None:intergenic |
| TCCTTCCTGCTAGTATTGCG+TGG | 0.529013 | 1.4:+68896623 | MS.gene21030:CDS |
| TATTGAGAAGCTTTGTGGTG+TGG | 0.529833 | 1.4:+68895719 | MS.gene21030:CDS |
| TAGTTATATGCAGGAACTCT+CGG | 0.530737 | 1.4:-68895488 | None:intergenic |
| TTACAATCAGAAACAAGAAA+AGG | 0.537721 | 1.4:-68897302 | None:intergenic |
| AACGCCGGTAGAAAGCTTGT+TGG | 0.538024 | 1.4:-68896385 | None:intergenic |
| ACAGTTAAGTAGTTATATGC+AGG | 0.538293 | 1.4:-68895497 | None:intergenic |
| GGTTGATGCGAGAAAGAAGG+AGG | 0.539493 | 1.4:-68894198 | None:intergenic |
| GTTGCTTCTGGCTTAATGAT+GGG | 0.540232 | 1.4:+68896230 | MS.gene21030:CDS |
| ATGCGAGAAAGAAGGAGGAA+TGG | 0.541534 | 1.4:-68894193 | None:intergenic |
| TCCATTAATTTGCCAACCAA+GGG | 0.542107 | 1.4:-68895458 | None:intergenic |
| AATGTTGTCTCTTCTATCAG+TGG | 0.542189 | 1.4:+68898899 | MS.gene21030:CDS |
| TGAGCGTGACTGGGTTGTGC+TGG | 0.542195 | 1.4:+68895758 | MS.gene21030:CDS |
| TTAACCAACAAGCTTTCTAC+CGG | 0.542347 | 1.4:+68896381 | MS.gene21030:CDS |
| TATAACCCAGCAGGGTGTGC+CGG | 0.542542 | 1.4:-68894711 | None:intergenic |
| GTCCATTAATTTGCCAACCA+AGG | 0.544175 | 1.4:-68895459 | None:intergenic |
| GAAGGTTGATGCGAGAAAGA+AGG | 0.545398 | 1.4:-68894201 | None:intergenic |
| TTGTCTCTTCTATCAGTGGT+TGG | 0.547810 | 1.4:+68898903 | MS.gene21030:CDS |
| ACATGTCATATGATGTCGTA+GGG | 0.548784 | 1.4:+68898733 | MS.gene21030:CDS |
| TCTTGTGAAACTTCAAGCTG+TGG | 0.549218 | 1.4:-68894117 | None:intergenic |
| CTAAATCCTCCAATGATGGA+TGG | 0.550468 | 1.4:-68897007 | None:intergenic |
| TTCAATATTGTTCTTACACC+AGG | 0.554964 | 1.4:+68896658 | MS.gene21030:CDS |
| AGCACCCACGCAATACTAGC+AGG | 0.557563 | 1.4:-68896628 | None:intergenic |
| ACATGTTCTTGCAGCTACTC+CGG | 0.558596 | 1.4:+68894692 | MS.gene21030:CDS |
| CAAGAGGCTTGAATGAATCA+AGG | 0.559351 | 1.4:-68895384 | None:intergenic |
| GCTTTGTGGTGTGGCTTTGG+GGG | 0.562182 | 1.4:+68895728 | MS.gene21030:CDS |
| CTGGCAGAGTCTCTAATGCT+TGG | 0.562890 | 1.4:+68898831 | MS.gene21030:CDS |
| CCTTCCTGCTAGTATTGCGT+GGG | 0.565115 | 1.4:+68896624 | MS.gene21030:CDS |
| TACACCAGGCAGTTTGATGA+CGG | 0.566575 | 1.4:+68896672 | MS.gene21030:CDS |
| AATGCCGTCATCAAACTGCC+TGG | 0.568599 | 1.4:-68896676 | None:intergenic |
| AGAAACAAGAAAAGGAGAAG+AGG | 0.569930 | 1.4:-68897294 | None:intergenic |
| TGAATCAAGGCAATGGCAGA+AGG | 0.572956 | 1.4:-68895371 | None:intergenic |
| TATCAGTGGTTGGTGCAGCA+TGG | 0.573779 | 1.4:+68898913 | MS.gene21030:CDS |
| GAAATGGATGAGATTAAAGG+AGG | 0.575293 | 1.4:-68894169 | None:intergenic |
| TCATCCAAAGCAAATCTCAT+CGG | 0.577100 | 1.4:+68898783 | MS.gene21030:CDS |
| CGATAGCGTAATCTCGAAGA+AGG | 0.580595 | 1.4:-68894219 | None:intergenic |
| GGTTGCAAATGAGCGTGACT+GGG | 0.583770 | 1.4:+68895749 | MS.gene21030:CDS |
| TGTCGTATTGGTTTCAGCTG+GGG | 0.584794 | 1.4:+68895695 | MS.gene21030:CDS |
| GCTAAACATCCAAAATGAGA+AGG | 0.588441 | 1.4:-68898876 | None:intergenic |
| AAAGTGGCTATAATTGTTGG+TGG | 0.593039 | 1.4:+68895434 | MS.gene21030:CDS |
| AATCAATACTGATATTCTGG+TGG | 0.598210 | 1.4:+68894501 | MS.gene21030:CDS |
| GTTAATGAGGATAAGAGTGA+AGG | 0.602355 | 1.4:+68894436 | MS.gene21030:intron |
| AGGTTTGTGATGGTTTAGGC+CGG | 0.604701 | 1.4:-68896413 | None:intergenic |
| GAAACCAATACGACAAACCA+TGG | 0.610451 | 1.4:-68895687 | None:intergenic |
| AAATGGATGAGATTAAAGGA+GGG | 0.610645 | 1.4:-68894168 | None:intergenic |
| GCTTGAATGAATCAAGGCAA+TGG | 0.619193 | 1.4:-68895378 | None:intergenic |
| TTACATCCATCCATCATTGG+AGG | 0.619549 | 1.4:+68897001 | MS.gene21030:CDS |
| TCGAATTGATCTGTTATCTG+AGG | 0.619996 | 1.4:+68895924 | MS.gene21030:CDS |
| GGTCTGGAAGCTATCAAGCT+CGG | 0.620628 | 1.4:+68896574 | MS.gene21030:CDS |
| CACATGTCATATGATGTCGT+AGG | 0.620963 | 1.4:+68898732 | MS.gene21030:CDS |
| GATCTGCAACAGGTTTGTGA+TGG | 0.622696 | 1.4:-68896423 | None:intergenic |
| CCACCACAGCAACTGGCAAG+AGG | 0.629861 | 1.4:-68895400 | None:intergenic |
| GGGCGCAAATTATCCAAACT+GGG | 0.634115 | 1.4:+68898754 | MS.gene21030:CDS |
| AGCAATGTAGACACTGAAGT+AGG | 0.635319 | 1.4:-68895657 | None:intergenic |
| CCCACGCAATACTAGCAGGA+AGG | 0.637832 | 1.4:-68896624 | None:intergenic |
| GCTGTTGCTGTATATATGAG+TGG | 0.644425 | 1.4:+68897252 | MS.gene21030:CDS |
| AATGTAGACACTGAAGTAGG+AGG | 0.659268 | 1.4:-68895654 | None:intergenic |
| TTTAGGCCGGTCAAGAACGC+CGG | 0.663850 | 1.4:-68896400 | None:intergenic |
| TTACATAAATATCAAAACTG+AGG | 0.665722 | 1.4:-68898996 | None:intergenic |
| TCCCACCATATAACCCAGCA+GGG | 0.668296 | 1.4:-68894719 | None:intergenic |
| TGTCAAGACAGTATCTACAA+AGG | 0.690460 | 1.4:-68894557 | None:intergenic |
| CAAGACAGTATCTACAAAGG+CGG | 0.696073 | 1.4:-68894554 | None:intergenic |
| CATGTCATATGATGTCGTAG+GGG | 0.709264 | 1.4:+68898734 | MS.gene21030:CDS |
| TTGAAGTTTCACAAGAAACG+AGG | 0.711096 | 1.4:+68894124 | MS.gene21030:CDS |
| AGCTGCTGATAGTAACTGAG+TGG | 0.727569 | 1.4:-68895607 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATAAATAATATGCAATTT+GGG | - | chr1.4:68898593-68898612 | None:intergenic | 15.0% |
| !! | TAATTATTTATGATTCTTAG+TGG | + | chr1.4:68895835-68895854 | MS.gene21030:intron | 15.0% |
| !! | TGAATAAATAATATGCAATT+TGG | - | chr1.4:68898594-68898613 | None:intergenic | 15.0% |
| !! | TTGAAAATAAAGAATTTACA+AGG | - | chr1.4:68898394-68898413 | None:intergenic | 15.0% |
| !!! | AAAATAGAATGATTGATTTT+AGG | - | chr1.4:68895580-68895599 | None:intergenic | 15.0% |
| !!! | ATATCAGTATTGATTTTAAT+CGG | - | chr1.4:68894496-68894515 | None:intergenic | 15.0% |
| !!! | TTTTTCAAAGGAAAAATAAT+TGG | - | chr1.4:68897526-68897545 | None:intergenic | 15.0% |
| !! | AAAAATAAAAGTGATCCAAA+AGG | + | chr1.4:68897685-68897704 | MS.gene21030:intron | 20.0% |
| !! | AAAATAAAAGTGATCCAAAA+GGG | + | chr1.4:68897686-68897705 | MS.gene21030:intron | 20.0% |
| !! | AAATAAATTAGTGACCTAAA+TGG | + | chr1.4:68898323-68898342 | MS.gene21030:intron | 20.0% |
| !! | AACATTGCAAATTGTTTATA+GGG | + | chr1.4:68898037-68898056 | MS.gene21030:intron | 20.0% |
| !! | AATGTGCATTATATATTTGA+TGG | + | chr1.4:68897817-68897836 | MS.gene21030:intron | 20.0% |
| !! | ATAGAGAAAATACAAAGTTA+TGG | + | chr1.4:68897759-68897778 | MS.gene21030:intron | 20.0% |
| !! | ATTTAGGTCACTAATTTATT+TGG | - | chr1.4:68898324-68898343 | None:intergenic | 20.0% |
| !! | GAAATTCGAACTTATATAAA+TGG | - | chr1.4:68894326-68894345 | None:intergenic | 20.0% |
| !! | TAAAATCAATACTGATATTC+TGG | + | chr1.4:68894498-68894517 | MS.gene21030:CDS | 20.0% |
| !! | TAACATTGCAAATTGTTTAT+AGG | + | chr1.4:68898036-68898055 | MS.gene21030:intron | 20.0% |
| !! | TAGAGAAAATACAAAGTTAT+GGG | + | chr1.4:68897760-68897779 | MS.gene21030:intron | 20.0% |
| !! | TATGTATGAAATCACAAAAT+AGG | - | chr1.4:68895031-68895050 | None:intergenic | 20.0% |
| !! | TTCAAACAATCTTACAAAAA+AGG | - | chr1.4:68898221-68898240 | None:intergenic | 20.0% |
| !! | TTCATGAGACAATAATAAAT+TGG | - | chr1.4:68896075-68896094 | None:intergenic | 20.0% |
| !! | TTTATTCAAACAATGACTAA+AGG | - | chr1.4:68897668-68897687 | None:intergenic | 20.0% |
| !!! | AAATCAATCATTCTATTTTC+AGG | + | chr1.4:68895581-68895600 | MS.gene21030:intron | 20.0% |
| !!! | CATTGTTTCTTATCTTTTTA+TGG | + | chr1.4:68894633-68894652 | MS.gene21030:intron | 20.0% |
| !!! | CATTTTTTGAAATACAAACT+TGG | + | chr1.4:68898612-68898631 | MS.gene21030:intron | 20.0% |
| !!! | TAAAAGTATGCTAATTAACT+TGG | - | chr1.4:68895961-68895980 | None:intergenic | 20.0% |
| !!! | TGTATTTTCTCTATATTTCA+AGG | - | chr1.4:68897753-68897772 | None:intergenic | 20.0% |
| !!! | TTTAAAATTGTGTCTTTCTT+CGG | + | chr1.4:68894878-68894897 | MS.gene21030:intron | 20.0% |
| ! | AAATAAAAGTGATCCAAAAG+GGG | + | chr1.4:68897687-68897706 | MS.gene21030:intron | 25.0% |
| ! | AAATAACAAACTACATGTCA+AGG | - | chr1.4:68895811-68895830 | None:intergenic | 25.0% |
| ! | AACACATGATATTTGTAAAG+AGG | - | chr1.4:68898185-68898204 | None:intergenic | 25.0% |
| ! | AACGAATACTGATATACAAT+TGG | + | chr1.4:68894402-68894421 | MS.gene21030:intron | 25.0% |
| ! | AATAACAAACTACATGTCAA+GGG | - | chr1.4:68895810-68895829 | None:intergenic | 25.0% |
| ! | ACACATGATATTTGTAAAGA+GGG | - | chr1.4:68898184-68898203 | None:intergenic | 25.0% |
| ! | ACATTGCAAATTGTTTATAG+GGG | + | chr1.4:68898038-68898057 | MS.gene21030:intron | 25.0% |
| ! | AGTATATGCTTATATCTATC+TGG | + | chr1.4:68896532-68896551 | MS.gene21030:intron | 25.0% |
| ! | ATTTCAAGGACAAAATTCAT+AGG | - | chr1.4:68897739-68897758 | None:intergenic | 25.0% |
| ! | CTAAGACAACATATATGATA+TGG | - | chr1.4:68894776-68894795 | None:intergenic | 25.0% |
| ! | CTTAGATACCAAATATCAAA+GGG | - | chr1.4:68897347-68897366 | None:intergenic | 25.0% |
| ! | GTATGTGAAAATTTCCTAAA+TGG | + | chr1.4:68896713-68896732 | MS.gene21030:intron | 25.0% |
| ! | TAACCTAAAAAACTAATCCT+CGG | - | chr1.4:68896937-68896956 | None:intergenic | 25.0% |
| ! | TACTGATATACAATTGGAAT+TGG | + | chr1.4:68894408-68894427 | MS.gene21030:intron | 25.0% |
| ! | TATAGGGGAAAGAATATATT+TGG | + | chr1.4:68898053-68898072 | MS.gene21030:intron | 25.0% |
| ! | TATTGTCTCATGAAATATTC+AGG | + | chr1.4:68896081-68896100 | MS.gene21030:intron | 25.0% |
| ! | TCTTAGATACCAAATATCAA+AGG | - | chr1.4:68897348-68897367 | None:intergenic | 25.0% |
| ! | TGATATGGATGTAGTTATTA+AGG | - | chr1.4:68894761-68894780 | None:intergenic | 25.0% |
| ! | TGATTGTAAGTCACTAAAAA+AGG | + | chr1.4:68897316-68897335 | MS.gene21030:intron | 25.0% |
| ! | TGTATGAGTGAAAAAAGATT+TGG | + | chr1.4:68898563-68898582 | MS.gene21030:intron | 25.0% |
| ! | TTACAATCAGAAACAAGAAA+AGG | - | chr1.4:68897305-68897324 | None:intergenic | 25.0% |
| ! | TTACATTCCACAAGTAAATA+GGG | - | chr1.4:68894952-68894971 | None:intergenic | 25.0% |
| ! | TTCAAAGGAAAAATAATTGG+AGG | - | chr1.4:68897523-68897542 | None:intergenic | 25.0% |
| ! | TTCAGGAGACAATAATAAAT+TGG | - | chr1.4:68895995-68896014 | None:intergenic | 25.0% |
| ! | TTTACATTCCACAAGTAAAT+AGG | - | chr1.4:68894953-68894972 | None:intergenic | 25.0% |
| !! | AATACAAACTTGGATTTTGA+TGG | + | chr1.4:68898622-68898641 | MS.gene21030:intron | 25.0% |
| !! | ATATCCTGCTTGATTTTATA+AGG | - | chr1.4:68895547-68895566 | None:intergenic | 25.0% |
| !! | TAGCATACTTTTATACTTCT+CGG | + | chr1.4:68895968-68895987 | MS.gene21030:intron | 25.0% |
| !! | TTGAAAATATTCTCTTTTCC+AGG | + | chr1.4:68897185-68897204 | MS.gene21030:intron | 25.0% |
| !!! | ATTTGTCATCGATTTTTCAA+AGG | - | chr1.4:68897538-68897557 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATTTCAGATAGC+TGG | + | chr1.4:68896152-68896171 | MS.gene21030:intron | 25.0% |
| !!! | TCCTTTTCCTTGTTTTATTT+GGG | + | chr1.4:68896910-68896929 | MS.gene21030:intron | 25.0% |
| !!! | TGTTTCTACAGATTTTATCA+CGG | + | chr1.4:68898703-68898722 | MS.gene21030:intron | 25.0% |
| !!! | TTATGGTTTGTTATGTATGT+AGG | + | chr1.4:68894650-68894669 | MS.gene21030:intron | 25.0% |
| !!! | TTCCTTTTCCTTGTTTTATT+TGG | + | chr1.4:68896909-68896928 | MS.gene21030:intron | 25.0% |
| AAATACAAAGTTATGGGACA+AGG | + | chr1.4:68897766-68897785 | MS.gene21030:intron | 30.0% | |
| AAATGCTGAAAATCTTACGT+TGG | + | chr1.4:68895054-68895073 | MS.gene21030:intron | 30.0% | |
| AAATGGATGAGATTAAAGGA+GGG | - | chr1.4:68894171-68894190 | None:intergenic | 30.0% | |
| AACAATCCATATCACCATTT+AGG | - | chr1.4:68898340-68898359 | None:intergenic | 30.0% | |
| AAGATTGTTTGAACGTATCT+AGG | + | chr1.4:68898228-68898247 | MS.gene21030:intron | 30.0% | |
| AAGTGCTTTCATTTGTTTGA+TGG | + | chr1.4:68895105-68895124 | MS.gene21030:intron | 30.0% | |
| AATCAATACTGATATTCTGG+TGG | + | chr1.4:68894501-68894520 | MS.gene21030:CDS | 30.0% | |
| AATTTGTGAGTTTCAAAGTC+AGG | - | chr1.4:68896135-68896154 | None:intergenic | 30.0% | |
| ACAGTTAAGTAGTTATATGC+AGG | - | chr1.4:68895500-68895519 | None:intergenic | 30.0% | |
| ACTAAAGTGGCTATAATTGT+TGG | + | chr1.4:68895431-68895450 | MS.gene21030:CDS | 30.0% | |
| ACTGAGGATGATAAGAAAAA+AGG | - | chr1.4:68898983-68899002 | None:intergenic | 30.0% | |
| ACTTCTTTCAAGCTTCAAAT+AGG | + | chr1.4:68897966-68897985 | MS.gene21030:intron | 30.0% | |
| AGAAAGTTCCTGAATATTTC+AGG | - | chr1.4:68896012-68896031 | None:intergenic | 30.0% | |
| AGTGCTTTCATTTGTTTGAT+GGG | + | chr1.4:68895106-68895125 | MS.gene21030:intron | 30.0% | |
| ATATGCTTATATCTATCTGG+TGG | + | chr1.4:68896535-68896554 | MS.gene21030:intron | 30.0% | |
| ATCAATCCCTATAGTAACTT+TGG | - | chr1.4:68897885-68897904 | None:intergenic | 30.0% | |
| ATTCCATATGTATAGAGCAA+TGG | - | chr1.4:68894992-68895011 | None:intergenic | 30.0% | |
| ATTTGTGAGTTTCAAAGTCA+GGG | - | chr1.4:68896134-68896153 | None:intergenic | 30.0% | |
| CAAACATCAATAAGTGTACA+AGG | - | chr1.4:68895241-68895260 | None:intergenic | 30.0% | |
| GACGATCACTATTTACAAAA+AGG | - | chr1.4:68898118-68898137 | None:intergenic | 30.0% | |
| GTGATAAAATCTGTAGAAAC+AGG | - | chr1.4:68898704-68898723 | None:intergenic | 30.0% | |
| GTGCATTATATATTTGATGG+TGG | + | chr1.4:68897820-68897839 | MS.gene21030:intron | 30.0% | |
| TAACTACTTAACTGTCATTC+AGG | + | chr1.4:68895505-68895524 | MS.gene21030:CDS | 30.0% | |
| TACACTTATTGATGTTTGTG+TGG | + | chr1.4:68895243-68895262 | MS.gene21030:intron | 30.0% | |
| TACATTCCACAAGTAAATAG+GGG | - | chr1.4:68894951-68894970 | None:intergenic | 30.0% | |
| TATACAATAACCACATCAGT+AGG | - | chr1.4:68898142-68898161 | None:intergenic | 30.0% | |
| TATCCATTGCTCTATACATA+TGG | + | chr1.4:68894986-68895005 | MS.gene21030:intron | 30.0% | |
| TATGTATAGAGCAATGGATA+CGG | - | chr1.4:68894986-68895005 | None:intergenic | 30.0% | |
| TATTGTCTCCTGAAATATTC+AGG | + | chr1.4:68896001-68896020 | MS.gene21030:intron | 30.0% | |
| TCCCAAATAAAACAAGGAAA+AGG | - | chr1.4:68896914-68896933 | None:intergenic | 30.0% | |
| TGATAGAAGGATAGTAATTG+AGG | - | chr1.4:68894260-68894279 | None:intergenic | 30.0% | |
| TGATATTTGTAAAGAGGGTT+TGG | - | chr1.4:68898179-68898198 | None:intergenic | 30.0% | |
| TGATGACCAAAGTTACTATA+GGG | + | chr1.4:68897876-68897895 | MS.gene21030:intron | 30.0% | |
| TTCAATATTGTTCTTACACC+AGG | + | chr1.4:68896658-68896677 | MS.gene21030:CDS | 30.0% | |
| ! | AAGGTGATATCAAACAGTTT+TGG | - | chr1.4:68895203-68895222 | None:intergenic | 30.0% |
| ! | ATTTGTTAGCAAACTAGACT+TGG | + | chr1.4:68898425-68898444 | MS.gene21030:intron | 30.0% |
| ! | CAAGCAATTTGGCATTTTAA+AGG | + | chr1.4:68897084-68897103 | MS.gene21030:CDS | 30.0% |
| ! | TGTATTGGGTGAAAATTTTG+CGG | + | chr1.4:68898450-68898469 | MS.gene21030:intron | 30.0% |
| ! | TTGATGACCAAAGTTACTAT+AGG | + | chr1.4:68897875-68897894 | MS.gene21030:intron | 30.0% |
| ! | TTGCATTGTTGCAAATTTTG+TGG | + | chr1.4:68895325-68895344 | MS.gene21030:CDS | 30.0% |
| !! | AAACTAGACTTGGTTTGTAT+TGG | + | chr1.4:68898435-68898454 | MS.gene21030:intron | 30.0% |
| !! | AACTAGACTTGGTTTGTATT+GGG | + | chr1.4:68898436-68898455 | MS.gene21030:intron | 30.0% |
| !! | AGATAGTGTGTTTTGAATAC+TGG | + | chr1.4:68898362-68898381 | MS.gene21030:intron | 30.0% |
| !! | AGCTTCATTGTTTTTCTAAC+TGG | + | chr1.4:68898473-68898492 | MS.gene21030:intron | 30.0% |
| !! | TAGCCTACTTTTATACTTCT+CGG | + | chr1.4:68896048-68896067 | MS.gene21030:intron | 30.0% |
| !! | TATATATTTGATGGTGGTGT+TGG | + | chr1.4:68897826-68897845 | MS.gene21030:intron | 30.0% |
| !! | TGCTAATGGATTGAAATGAT+AGG | + | chr1.4:68897393-68897412 | MS.gene21030:intron | 30.0% |
| !!! | GGTTGTTTTTTCATAGGTTT+AGG | + | chr1.4:68894592-68894611 | MS.gene21030:intron | 30.0% |
| !!! | TTTGCAATTTTAGAGTATCC+AGG | - | chr1.4:68897430-68897449 | None:intergenic | 30.0% |
| AAAGAAGCTTCCCAAAGAAA+GGG | - | chr1.4:68896740-68896759 | None:intergenic | 35.0% | |
| AAAGATTATGCTGCCAATGA+GGG | + | chr1.4:68896786-68896805 | MS.gene21030:intron | 35.0% | |
| AAAGTGGCTATAATTGTTGG+TGG | + | chr1.4:68895434-68895453 | MS.gene21030:CDS | 35.0% | |
| AACAGAGAACTTACTGTAAC+AGG | - | chr1.4:68896263-68896282 | None:intergenic | 35.0% | |
| AACTTGAAGGAAAACCAGTT+AGG | - | chr1.4:68894097-68894116 | None:intergenic | 35.0% | |
| AATGTTGTCTCTTCTATCAG+TGG | + | chr1.4:68898899-68898918 | MS.gene21030:CDS | 35.0% | |
| ACATATGGAATTGTGGAATG+TGG | + | chr1.4:68895001-68895020 | MS.gene21030:intron | 35.0% | |
| ACATGTCATATGATGTCGTA+GGG | + | chr1.4:68898733-68898752 | MS.gene21030:CDS | 35.0% | |
| ACATTCCACAAGTAAATAGG+GGG | - | chr1.4:68894950-68894969 | None:intergenic | 35.0% | |
| ACTGTCGTATGAAATCTTCA+GGG | - | chr1.4:68896515-68896534 | None:intergenic | 35.0% | |
| AGAAACAAGAAAAGGAGAAG+AGG | - | chr1.4:68897297-68897316 | None:intergenic | 35.0% | |
| AGGCTTAACAAGAAGCTTTA+AGG | - | chr1.4:68897605-68897624 | None:intergenic | 35.0% | |
| ATACTCCTAGGTCATATCTA+GGG | + | chr1.4:68897492-68897511 | MS.gene21030:intron | 35.0% | |
| ATCTGCTTAAAAGTTGCTTC+TGG | + | chr1.4:68896218-68896237 | MS.gene21030:CDS | 35.0% | |
| ATGAAATCTTCAGGGTCTAT+GGG | - | chr1.4:68896507-68896526 | None:intergenic | 35.0% | |
| CAATAAGTGTACAAGGCATA+AGG | - | chr1.4:68895234-68895253 | None:intergenic | 35.0% | |
| CAGGATGAAATTTGGAAAGA+AGG | - | chr1.4:68896196-68896215 | None:intergenic | 35.0% | |
| CCTATGAAAAAACAACCTAC+AGG | - | chr1.4:68894589-68894608 | None:intergenic | 35.0% | |
| CTGAAGTAAGTTAATGAACG+AGG | - | chr1.4:68896297-68896316 | None:intergenic | 35.0% | |
| GAAATGGATGAGATTAAAGG+AGG | - | chr1.4:68894172-68894191 | None:intergenic | 35.0% | |
| GAATATAATTTCGACAGCCT+TGG | + | chr1.4:68897366-68897385 | MS.gene21030:intron | 35.0% | |
| GCAGATTACAGGATGAAATT+TGG | - | chr1.4:68896204-68896223 | None:intergenic | 35.0% | |
| GCTAAACATCCAAAATGAGA+AGG | - | chr1.4:68898879-68898898 | None:intergenic | 35.0% | |
| GCTCTATACATATGGAATTG+TGG | + | chr1.4:68894994-68895013 | MS.gene21030:intron | 35.0% | |
| GGAATTGGATCATGTTAATG+AGG | + | chr1.4:68894423-68894442 | MS.gene21030:intron | 35.0% | |
| GGTGAAATGGATGAGATTAA+AGG | - | chr1.4:68894175-68894194 | None:intergenic | 35.0% | |
| GTTAATGAGGATAAGAGTGA+AGG | + | chr1.4:68894436-68894455 | MS.gene21030:intron | 35.0% | |
| TAAAGATTATGCTGCCAATG+AGG | + | chr1.4:68896785-68896804 | MS.gene21030:intron | 35.0% | |
| TAATACCTCTGAGTGATAGA+AGG | - | chr1.4:68894273-68894292 | None:intergenic | 35.0% | |
| TACTGTCGTATGAAATCTTC+AGG | - | chr1.4:68896516-68896535 | None:intergenic | 35.0% | |
| TAGTGACCTAAATGGTGATA+TGG | + | chr1.4:68898331-68898350 | MS.gene21030:intron | 35.0% | |
| TAGTTATATGCAGGAACTCT+CGG | - | chr1.4:68895491-68895510 | None:intergenic | 35.0% | |
| TATGAAATCTTCAGGGTCTA+TGG | - | chr1.4:68896508-68896527 | None:intergenic | 35.0% | |
| TCATCCAAAGCAAATCTCAT+CGG | + | chr1.4:68898783-68898802 | MS.gene21030:CDS | 35.0% | |
| TCGAATTGATCTGTTATCTG+AGG | + | chr1.4:68895924-68895943 | MS.gene21030:CDS | 35.0% | |
| TGATAGGTATAATTGAAGCC+TGG | + | chr1.4:68897409-68897428 | MS.gene21030:intron | 35.0% | |
| TGTCAAGACAGTATCTACAA+AGG | - | chr1.4:68894560-68894579 | None:intergenic | 35.0% | |
| TTAACCAACAAGCTTTCTAC+CGG | + | chr1.4:68896381-68896400 | MS.gene21030:CDS | 35.0% | |
| TTGAAGCTTGAAAGAAGTTC+TGG | - | chr1.4:68897964-68897983 | None:intergenic | 35.0% | |
| TTGAAGTTTCACAAGAAACG+AGG | + | chr1.4:68894124-68894143 | MS.gene21030:CDS | 35.0% | |
| ! | AAATATTCTCTTTTCCAGGC+TGG | + | chr1.4:68897189-68897208 | MS.gene21030:intron | 35.0% |
| ! | AATATTCTCTTTTCCAGGCT+GGG | + | chr1.4:68897190-68897209 | MS.gene21030:intron | 35.0% |
| ! | AGGTTTTGCCCTTTGATATT+TGG | + | chr1.4:68897336-68897355 | MS.gene21030:intron | 35.0% |
| ! | AGTGGAATGTGTGCTTTTAT+GGG | + | chr1.4:68897028-68897047 | MS.gene21030:CDS | 35.0% |
| ! | ATGAGATTTGCTTTGGATGA+TGG | - | chr1.4:68898783-68898802 | None:intergenic | 35.0% |
| ! | GCAACTTTTAAGCAGATTAC+AGG | - | chr1.4:68896215-68896234 | None:intergenic | 35.0% |
| ! | TAGTGGAATGTGTGCTTTTA+TGG | + | chr1.4:68897027-68897046 | MS.gene21030:CDS | 35.0% |
| ! | TGAGATTTGCTTTGGATGAT+GGG | - | chr1.4:68898782-68898801 | None:intergenic | 35.0% |
| ! | TGAGCCTTATAAAATCAAGC+AGG | + | chr1.4:68895540-68895559 | MS.gene21030:intron | 35.0% |
| !! | AAGCCTTATTCTCCATCATA+TGG | + | chr1.4:68897619-68897638 | MS.gene21030:intron | 35.0% |
| !! | CTTATCATCCTCAGTTTTGA+TGG | + | chr1.4:68898988-68899007 | MS.gene21030:CDS | 35.0% |
| !! | TATGTAGGTTTTGTCTGAAG+AGG | + | chr1.4:68894665-68894684 | MS.gene21030:intron | 35.0% |
| !! | TCAAGCTTTATTTCTCAGCA+TGG | + | chr1.4:68897230-68897249 | MS.gene21030:CDS | 35.0% |
| !! | TCCATTAATTTGCCAACCAA+GGG | - | chr1.4:68895461-68895480 | None:intergenic | 35.0% |
| !!! | CCTGTAGGTTGTTTTTTCAT+AGG | + | chr1.4:68894586-68894605 | MS.gene21030:intron | 35.0% |
| !!! | GTATTGATTTTAATCGGCAC+AGG | - | chr1.4:68894490-68894509 | None:intergenic | 35.0% |
| AAAACCAGTTGTTAAGGGTC+TGG | + | chr1.4:68896558-68896577 | MS.gene21030:intron | 40.0% | |
| AAAAGTGATCCAAAAGGGGA+GGG | + | chr1.4:68897691-68897710 | MS.gene21030:intron | 40.0% | |
| AAACTACATGTCAAGGGAAC+AGG | - | chr1.4:68895804-68895823 | None:intergenic | 40.0% | |
| AACAATTGAGGAGGGAAACT+TGG | - | chr1.4:68896973-68896992 | None:intergenic | 40.0% | |
| AACCCATGTTCGAATGTCAA+AGG | - | chr1.4:68898003-68898022 | None:intergenic | 40.0% | |
| AAGAAGGAGGAATGGTGAAA+TGG | - | chr1.4:68894188-68894207 | None:intergenic | 40.0% | |
| AAGATTATGCTGCCAATGAG+GGG | + | chr1.4:68896787-68896806 | MS.gene21030:intron | 40.0% | |
| AAGGCATAAGGCACGTAATA+AGG | - | chr1.4:68895222-68895241 | None:intergenic | 40.0% | |
| AATGTAGACACTGAAGTAGG+AGG | - | chr1.4:68895657-68895676 | None:intergenic | 40.0% | |
| ACAAGAAACGAGGACAACTA+TGG | + | chr1.4:68894134-68894153 | MS.gene21030:CDS | 40.0% | |
| ACAAGGAAAGACAAGGTTGT+GGG | + | chr1.4:68897783-68897802 | MS.gene21030:intron | 40.0% | |
| ACCCATGTTCGAATGTCAAA+GGG | - | chr1.4:68898002-68898021 | None:intergenic | 40.0% | |
| ACTATCCTTCTATCACTCAG+AGG | + | chr1.4:68894265-68894284 | MS.gene21030:intron | 40.0% | |
| AGAACATGAAAACCCCTCAT+TGG | - | chr1.4:68896802-68896821 | None:intergenic | 40.0% | |
| AGATACAGCTGTGATGCATT+TGG | + | chr1.4:68897565-68897584 | MS.gene21030:intron | 40.0% | |
| AGCAATGTAGACACTGAAGT+AGG | - | chr1.4:68895660-68895679 | None:intergenic | 40.0% | |
| AGCACTTCATCTAAGTGACA+GGG | - | chr1.4:68894913-68894932 | None:intergenic | 40.0% | |
| AGTATCCAGGCTTCATTGAT+AGG | + | chr1.4:68898279-68898298 | MS.gene21030:intron | 40.0% | |
| ATACAGCTGTGATGCATTTG+GGG | + | chr1.4:68897567-68897586 | MS.gene21030:intron | 40.0% | |
| CAAAACCCCCTATTTACTTG+TGG | + | chr1.4:68894942-68894961 | MS.gene21030:intron | 40.0% | |
| CAACAGGTTTGTGATGGTTT+AGG | - | chr1.4:68896420-68896439 | None:intergenic | 40.0% | |
| CAAGACAGTATCTACAAAGG+CGG | - | chr1.4:68894557-68894576 | None:intergenic | 40.0% | |
| CAAGAGGCTTGAATGAATCA+AGG | - | chr1.4:68895387-68895406 | None:intergenic | 40.0% | |
| CAATCCATTAGCAACTACCA+AGG | - | chr1.4:68897386-68897405 | None:intergenic | 40.0% | |
| CACATGTCATATGATGTCGT+AGG | + | chr1.4:68898732-68898751 | MS.gene21030:CDS | 40.0% | |
| CATCCAAAGCAAATCTCATC+GGG | + | chr1.4:68898784-68898803 | MS.gene21030:CDS | 40.0% | |
| CATGTCATATGATGTCGTAG+GGG | + | chr1.4:68898734-68898753 | MS.gene21030:CDS | 40.0% | |
| CCTAAATGGTCCCTTTCTTT+GGG | + | chr1.4:68896727-68896746 | MS.gene21030:intron | 40.0% | |
| CTTATTGATGTTTGTGTGGC+TGG | + | chr1.4:68895247-68895266 | MS.gene21030:intron | 40.0% | |
| GAAAAAACAACCTACAGGCA+AGG | - | chr1.4:68894584-68894603 | None:intergenic | 40.0% | |
| GAAACCAATACGACAAACCA+TGG | - | chr1.4:68895690-68895709 | None:intergenic | 40.0% | |
| GAAAGAAGCTTCCCAAAGAA+AGG | - | chr1.4:68896741-68896760 | None:intergenic | 40.0% | |
| GAATTCCTATCAATGAAGCC+TGG | - | chr1.4:68898287-68898306 | None:intergenic | 40.0% | |
| GATACAGCTGTGATGCATTT+GGG | + | chr1.4:68897566-68897585 | MS.gene21030:intron | 40.0% | |
| GATACTCCTAGGTCATATCT+AGG | + | chr1.4:68897491-68897510 | MS.gene21030:intron | 40.0% | |
| GCTGTTGCTGTATATATGAG+TGG | + | chr1.4:68897252-68897271 | MS.gene21030:CDS | 40.0% | |
| GCTTGAATGAATCAAGGCAA+TGG | - | chr1.4:68895381-68895400 | None:intergenic | 40.0% | |
| GGTGGAAAACCAGTTGTTAA+GGG | + | chr1.4:68896553-68896572 | MS.gene21030:intron | 40.0% | |
| GTAAGCCTGTAGAACAATTG+AGG | - | chr1.4:68896985-68897004 | None:intergenic | 40.0% | |
| TAAAAGTGATCCAAAAGGGG+AGG | + | chr1.4:68897690-68897709 | MS.gene21030:intron | 40.0% | |
| TAATTCCTCTCGCCATATGA+TGG | - | chr1.4:68897634-68897653 | None:intergenic | 40.0% | |
| TCCACTAAATCCTCCAATGA+TGG | - | chr1.4:68897014-68897033 | None:intergenic | 40.0% | |
| TCCATCATTGGAGGATTTAG+TGG | + | chr1.4:68897010-68897029 | MS.gene21030:CDS | 40.0% | |
| TCCCTTGGTTGGCAAATTAA+TGG | + | chr1.4:68895457-68895476 | MS.gene21030:CDS | 40.0% | |
| TCCTAAATGGTCCCTTTCTT+TGG | + | chr1.4:68896726-68896745 | MS.gene21030:intron | 40.0% | |
| TCTTGTGAAACTTCAAGCTG+TGG | - | chr1.4:68894120-68894139 | None:intergenic | 40.0% | |
| TGGTGGAAAACCAGTTGTTA+AGG | + | chr1.4:68896552-68896571 | MS.gene21030:intron | 40.0% | |
| TTACATCCATCCATCATTGG+AGG | + | chr1.4:68897001-68897020 | MS.gene21030:CDS | 40.0% | |
| TTATGGGACAAGGAAAGACA+AGG | + | chr1.4:68897776-68897795 | MS.gene21030:intron | 40.0% | |
| TTCATCGAATGATCTGCAAC+AGG | - | chr1.4:68896436-68896455 | None:intergenic | 40.0% | |
| TTGGACTTCTTGAATTGGCT+GGG | + | chr1.4:68897845-68897864 | MS.gene21030:intron | 40.0% | |
| TTGTCTCTTCTATCAGTGGT+TGG | + | chr1.4:68898903-68898922 | MS.gene21030:CDS | 40.0% | |
| ! | AATGTGTGCTTTTATGGGTG+TGG | + | chr1.4:68897033-68897052 | MS.gene21030:CDS | 40.0% |
| ! | ATATTCTCTTTTCCAGGCTG+GGG | + | chr1.4:68897191-68897210 | MS.gene21030:intron | 40.0% |
| ! | CAAATTTTGTGGAGCAGCTT+TGG | + | chr1.4:68895336-68895355 | MS.gene21030:CDS | 40.0% |
| ! | CACAAGTAAATAGGGGGTTT+TGG | - | chr1.4:68894944-68894963 | None:intergenic | 40.0% |
| ! | CTAAATCCTCCAATGATGGA+TGG | - | chr1.4:68897010-68897029 | None:intergenic | 40.0% |
| ! | CTACAGATTTTATCACGGCT+AGG | + | chr1.4:68898708-68898727 | MS.gene21030:intron | 40.0% |
| ! | GCAAACGATCCTTCTCATTT+TGG | + | chr1.4:68898867-68898886 | MS.gene21030:CDS | 40.0% |
| ! | GGACCGAGAAGTATAAAAGT+AGG | - | chr1.4:68895974-68895993 | None:intergenic | 40.0% |
| ! | TATTGAGAAGCTTTGTGGTG+TGG | + | chr1.4:68895719-68895738 | MS.gene21030:CDS | 40.0% |
| ! | TCGCCATATGATGGAGAATA+AGG | - | chr1.4:68897625-68897644 | None:intergenic | 40.0% |
| ! | TGGTGTTGGACTTCTTGAAT+TGG | + | chr1.4:68897840-68897859 | MS.gene21030:intron | 40.0% |
| !! | AAGTTCTGGCTCTACTGAAT+TGG | - | chr1.4:68897950-68897969 | None:intergenic | 40.0% |
| !! | AGTTGCTTCTGGCTTAATGA+TGG | + | chr1.4:68896229-68896248 | MS.gene21030:CDS | 40.0% |
| !! | GTCCATTAATTTGCCAACCA+AGG | - | chr1.4:68895462-68895481 | None:intergenic | 40.0% |
| !! | GTTGCTTCTGGCTTAATGAT+GGG | + | chr1.4:68896230-68896249 | MS.gene21030:CDS | 40.0% |
| !! | TAGGAGTATCGTATGAGTGT+CGG | - | chr1.4:68897481-68897500 | None:intergenic | 40.0% |
| !! | TATAATTGTTGGTGGTCCCT+TGG | + | chr1.4:68895442-68895461 | MS.gene21030:CDS | 40.0% |
| !! | TTGTCGTATTGGTTTCAGCT+GGG | + | chr1.4:68895694-68895713 | MS.gene21030:CDS | 40.0% |
| !! | TTTGTCGTATTGGTTTCAGC+TGG | + | chr1.4:68895693-68895712 | MS.gene21030:CDS | 40.0% |
| !!! | AGGCTTTTTTGTTCGTCTGT+TGG | - | chr1.4:68898963-68898982 | None:intergenic | 40.0% |
| !!! | GGACCGAGGATTAGTTTTTT+AGG | + | chr1.4:68896931-68896950 | MS.gene21030:intron | 40.0% |
| AACATTCGTGTCTTCGACTC+TGG | + | chr1.4:68897060-68897079 | MS.gene21030:CDS | 45.0% | |
| AACTTCAGATGTGCCTAGCT+TGG | + | chr1.4:68895152-68895171 | MS.gene21030:intron | 45.0% | |
| ACATGTTCTTGCAGCTACTC+CGG | + | chr1.4:68894692-68894711 | MS.gene21030:CDS | 45.0% | |
| AGCCTGTAGAACAATTGAGG+AGG | - | chr1.4:68896982-68897001 | None:intergenic | 45.0% | |
| AGCTGCTGATAGTAACTGAG+TGG | - | chr1.4:68895610-68895629 | None:intergenic | 45.0% | |
| AGGTTTGTGATGGTTTAGGC+CGG | - | chr1.4:68896416-68896435 | None:intergenic | 45.0% | |
| ATCCAAAAGGGGAGGGAATT+TGG | + | chr1.4:68897698-68897717 | MS.gene21030:intron | 45.0% | |
| ATGCAGGAACTCTCGGTAAA+TGG | - | chr1.4:68895484-68895503 | None:intergenic | 45.0% | |
| ATGCGAGAAAGAAGGAGGAA+TGG | - | chr1.4:68894196-68894215 | None:intergenic | 45.0% | |
| ATGCTCCCTAGATATGACCT+AGG | - | chr1.4:68897500-68897519 | None:intergenic | 45.0% | |
| ATTCTCCATCATATGGCGAG+AGG | + | chr1.4:68897626-68897645 | MS.gene21030:intron | 45.0% | |
| CACAGCTGACAGGAGTTAAT+AGG | + | chr1.4:68895866-68895885 | MS.gene21030:intron | 45.0% | |
| CAGCATGGATGTTCTGTAGA+TGG | + | chr1.4:68898928-68898947 | MS.gene21030:CDS | 45.0% | |
| CCCAAAGAAAGGGACCATTT+AGG | - | chr1.4:68896730-68896749 | None:intergenic | 45.0% | |
| CCTCGGTCCCAAATAAAACA+AGG | - | chr1.4:68896920-68896939 | None:intergenic | 45.0% | |
| CGATAGCGTAATCTCGAAGA+AGG | - | chr1.4:68894222-68894241 | None:intergenic | 45.0% | |
| CTATTAACTCCTGTCAGCTG+TGG | - | chr1.4:68895868-68895887 | None:intergenic | 45.0% | |
| CTTCAAGCTGTGGAACTTGA+AGG | - | chr1.4:68894110-68894129 | None:intergenic | 45.0% | |
| GACAACAAGATCACCAAGCT+AGG | - | chr1.4:68895168-68895187 | None:intergenic | 45.0% | |
| GACAAGGAAAGACAAGGTTG+TGG | + | chr1.4:68897782-68897801 | MS.gene21030:intron | 45.0% | |
| GACACTCATACGATACTCCT+AGG | + | chr1.4:68897480-68897499 | MS.gene21030:intron | 45.0% | |
| GAGCACTTCATCTAAGTGAC+AGG | - | chr1.4:68894914-68894933 | None:intergenic | 45.0% | |
| GATCTGCAACAGGTTTGTGA+TGG | - | chr1.4:68896426-68896445 | None:intergenic | 45.0% | |
| GCATCAGATGCTGACAGTAT+AGG | + | chr1.4:68896462-68896481 | MS.gene21030:CDS | 45.0% | |
| GCCCTTTGACATTCGAACAT+GGG | + | chr1.4:68897998-68898017 | MS.gene21030:intron | 45.0% | |
| GCCTGTAGAACAATTGAGGA+GGG | - | chr1.4:68896981-68897000 | None:intergenic | 45.0% | |
| GGCTTACATCCATCCATCAT+TGG | + | chr1.4:68896998-68897017 | MS.gene21030:intron | 45.0% | |
| GGGCGCAAATTATCCAAACT+GGG | + | chr1.4:68898754-68898773 | MS.gene21030:CDS | 45.0% | |
| GGTTTATTTCCACAGCTGAC+AGG | + | chr1.4:68895856-68895875 | MS.gene21030:intron | 45.0% | |
| GTTGGACTTCTTGAATTGGC+TGG | + | chr1.4:68897844-68897863 | MS.gene21030:intron | 45.0% | |
| TACACCAGGCAGTTTGATGA+CGG | + | chr1.4:68896672-68896691 | MS.gene21030:CDS | 45.0% | |
| TCCCTCCTCAATTGTTCTAC+AGG | + | chr1.4:68896977-68896996 | MS.gene21030:intron | 45.0% | |
| TCGACTCTGGTCAAGCAATT+TGG | + | chr1.4:68897073-68897092 | MS.gene21030:CDS | 45.0% | |
| TGAATCAAGGCAATGGCAGA+AGG | - | chr1.4:68895374-68895393 | None:intergenic | 45.0% | |
| TGCCCTTTGACATTCGAACA+TGG | + | chr1.4:68897997-68898016 | MS.gene21030:intron | 45.0% | |
| TTCAGGGTCTATGGGAAGAT+CGG | - | chr1.4:68896499-68896518 | None:intergenic | 45.0% | |
| ! | AACCAAATTCCCTCCCCTTT+TGG | - | chr1.4:68897703-68897722 | None:intergenic | 45.0% |
| ! | AAGCTTTGTGGTGTGGCTTT+GGG | + | chr1.4:68895726-68895745 | MS.gene21030:CDS | 45.0% |
| ! | ACAGCCTTGGTAGTTGCTAA+TGG | + | chr1.4:68897379-68897398 | MS.gene21030:intron | 45.0% |
| ! | ACGGCATTTTTAACGCAGCA+TGG | + | chr1.4:68896691-68896710 | MS.gene21030:CDS | 45.0% |
| ! | AGAAGTTGCTGTTGCAAGTC+TGG | + | chr1.4:68898812-68898831 | MS.gene21030:CDS | 45.0% |
| ! | AGTCCCGATGAGATTTGCTT+TGG | - | chr1.4:68898790-68898809 | None:intergenic | 45.0% |
| ! | GGTGGGTTTCTTCACTAAAG+TGG | + | chr1.4:68895418-68895437 | MS.gene21030:CDS | 45.0% |
| ! | TGAGTTGGACGAAACCTAAC+TGG | + | chr1.4:68894080-68894099 | MS.gene21030:CDS | 45.0% |
| !! | ATAGCTGGAGCATTGCTGTT+TGG | + | chr1.4:68896167-68896186 | MS.gene21030:CDS | 45.0% |
| !! | GAAGGTTGATGCGAGAAAGA+AGG | - | chr1.4:68894204-68894223 | None:intergenic | 45.0% |
| !! | TGTCGTATTGGTTTCAGCTG+GGG | + | chr1.4:68895695-68895714 | MS.gene21030:CDS | 45.0% |
| !!! | AGCAGCTTTGGACTTTTGCT+TGG | + | chr1.4:68895348-68895367 | MS.gene21030:CDS | 45.0% |
| !!! | CCTTGTTTTATTTGGGACCG+AGG | + | chr1.4:68896917-68896936 | MS.gene21030:intron | 45.0% |
| AACGCCGGTAGAAAGCTTGT+TGG | - | chr1.4:68896388-68896407 | None:intergenic | 50.0% | |
| AAGAAACCCACCACAGCAAC+TGG | - | chr1.4:68895410-68895429 | None:intergenic | 50.0% | |
| AATGCCGTCATCAAACTGCC+TGG | - | chr1.4:68896679-68896698 | None:intergenic | 50.0% | |
| ACCCTGCTGGGTTATATGGT+GGG | + | chr1.4:68894718-68894737 | MS.gene21030:intron | 50.0% | |
| ATCCCACCATATAACCCAGC+AGG | - | chr1.4:68894723-68894742 | None:intergenic | 50.0% | |
| CCTTCCTGCTAGTATTGCGT+GGG | + | chr1.4:68896624-68896643 | MS.gene21030:CDS | 50.0% | |
| CTACATTGCTTCTGCGTCCA+TGG | + | chr1.4:68895670-68895689 | MS.gene21030:CDS | 50.0% | |
| CTGGCAGAGTCTCTAATGCT+TGG | + | chr1.4:68898831-68898850 | MS.gene21030:CDS | 50.0% | |
| CTTACGTTGGTGCAGCTTGT+TGG | + | chr1.4:68895067-68895086 | MS.gene21030:intron | 50.0% | |
| GCAATACTAGCAGGAAGGAC+TGG | - | chr1.4:68896622-68896641 | None:intergenic | 50.0% | |
| GCTTCCAGACCCTTAACAAC+TGG | - | chr1.4:68896565-68896584 | None:intergenic | 50.0% | |
| GGGGCGCAAATTATCCAAAC+TGG | + | chr1.4:68898753-68898772 | MS.gene21030:CDS | 50.0% | |
| GGGGCTATTGAGAAGCTTTG+TGG | + | chr1.4:68895714-68895733 | MS.gene21030:CDS | 50.0% | |
| GGTCTGGAAGCTATCAAGCT+CGG | + | chr1.4:68896574-68896593 | MS.gene21030:CDS | 50.0% | |
| GGTTGCAAATGAGCGTGACT+GGG | + | chr1.4:68895749-68895768 | MS.gene21030:CDS | 50.0% | |
| GTCTTGACATCCTTGCCTGT+AGG | + | chr1.4:68894571-68894590 | MS.gene21030:intron | 50.0% | |
| GTGATCGTCACCTACTGATG+TGG | + | chr1.4:68898129-68898148 | MS.gene21030:intron | 50.0% | |
| TCCCACCATATAACCCAGCA+GGG | - | chr1.4:68894722-68894741 | None:intergenic | 50.0% | |
| TCCTTCCTGCTAGTATTGCG+TGG | + | chr1.4:68896623-68896642 | MS.gene21030:CDS | 50.0% | |
| TTTCTACCGGCGTTCTTGAC+CGG | + | chr1.4:68896394-68896413 | MS.gene21030:CDS | 50.0% | |
| TTTGCTTGTGCAAGTGCGAC+TGG | - | chr1.4:68895892-68895911 | None:intergenic | 50.0% | |
| ! | AGCTTTGTGGTGTGGCTTTG+GGG | + | chr1.4:68895727-68895746 | MS.gene21030:CDS | 50.0% |
| ! | GAAGCTTTGTGGTGTGGCTT+TGG | + | chr1.4:68895725-68895744 | MS.gene21030:CDS | 50.0% |
| ! | GCGTCCATGGTTTGTCGTAT+TGG | + | chr1.4:68895683-68895702 | MS.gene21030:CDS | 50.0% |
| ! | GGTTGATGCGAGAAAGAAGG+AGG | - | chr1.4:68894201-68894220 | None:intergenic | 50.0% |
| ! | TATCAGTGGTTGGTGCAGCA+TGG | + | chr1.4:68898913-68898932 | MS.gene21030:CDS | 50.0% |
| !! | ATTGTTGGTGGTCCCTTGGT+TGG | + | chr1.4:68895446-68895465 | MS.gene21030:CDS | 50.0% |
| !! | CTCGGCTGGAAAGAGTATCT+TGG | + | chr1.4:68896592-68896611 | MS.gene21030:CDS | 50.0% |
| !! | TGGATGATGGGATCCCAGTT+TGG | - | chr1.4:68898770-68898789 | None:intergenic | 50.0% |
| AAGCCTCTTGCCAGTTGCTG+TGG | + | chr1.4:68895397-68895416 | MS.gene21030:CDS | 55.0% | |
| AGCACCCACGCAATACTAGC+AGG | - | chr1.4:68896631-68896650 | None:intergenic | 55.0% | |
| CACCCTGCTGGGTTATATGG+TGG | + | chr1.4:68894717-68894736 | MS.gene21030:intron | 55.0% | |
| CCCACGCAATACTAGCAGGA+AGG | - | chr1.4:68896627-68896646 | None:intergenic | 55.0% | |
| CGCGCTGCGTATAAGTATCC+AGG | + | chr1.4:68898266-68898285 | MS.gene21030:intron | 55.0% | |
| CTCTTGCCAGTTGCTGTGGT+GGG | + | chr1.4:68895401-68895420 | MS.gene21030:CDS | 55.0% | |
| GCACACCCTGCTGGGTTATA+TGG | + | chr1.4:68894714-68894733 | MS.gene21030:CDS | 55.0% | |
| GCAGCGCGTATGATGCAATG+TGG | - | chr1.4:68898254-68898273 | None:intergenic | 55.0% | |
| GGGGAGGGAATTTGGTTGTG+TGG | + | chr1.4:68897706-68897725 | MS.gene21030:intron | 55.0% | |
| GGGTTGCAAATGAGCGTGAC+TGG | + | chr1.4:68895748-68895767 | MS.gene21030:CDS | 55.0% | |
| TATAACCCAGCAGGGTGTGC+CGG | - | chr1.4:68894714-68894733 | None:intergenic | 55.0% | |
| TGGAAGCTATCAAGCTCGGC+TGG | + | chr1.4:68896578-68896597 | MS.gene21030:CDS | 55.0% | |
| TTTAGGCCGGTCAAGAACGC+CGG | - | chr1.4:68896403-68896422 | None:intergenic | 55.0% | |
| ! | TTTTCCAGGCTGGGGCAGTT+GGG | + | chr1.4:68897199-68897218 | MS.gene21030:intron | 55.0% |
| !! | GCTTTGTGGTGTGGCTTTGG+GGG | + | chr1.4:68895728-68895747 | MS.gene21030:CDS | 55.0% |
| CCACCACAGCAACTGGCAAG+AGG | - | chr1.4:68895403-68895422 | None:intergenic | 60.0% | |
| CCTCTTGCCAGTTGCTGTGG+TGG | + | chr1.4:68895400-68895419 | MS.gene21030:CDS | 60.0% | |
| TGAGCGTGACTGGGTTGTGC+TGG | + | chr1.4:68895758-68895777 | MS.gene21030:CDS | 60.0% | |
| ! | CTTTTCCAGGCTGGGGCAGT+TGG | + | chr1.4:68897198-68897217 | MS.gene21030:intron | 60.0% |
| CTACTCCGGCACACCCTGCT+GGG | + | chr1.4:68894706-68894725 | MS.gene21030:CDS | 65.0% | |
| CCAACCCAACTGCCCCAGCC+TGG | - | chr1.4:68897206-68897225 | None:intergenic | 70.0% | |
| CCAGGCTGGGGCAGTTGGGT+TGG | + | chr1.4:68897203-68897222 | MS.gene21030:intron | 70.0% | |
| GCTACTCCGGCACACCCTGC+TGG | + | chr1.4:68894705-68894724 | MS.gene21030:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 68894079 | 68899007 | 68894079 | ID=MS.gene21030 |
| chr1.4 | mRNA | 68894079 | 68899007 | 68894079 | ID=MS.gene21030.t1;Parent=MS.gene21030 |
| chr1.4 | exon | 68894079 | 68894243 | 68894079 | ID=MS.gene21030.t1.exon1;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68894079 | 68894243 | 68894079 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68894445 | 68894588 | 68894445 | ID=MS.gene21030.t1.exon2;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68894445 | 68894588 | 68894445 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68894672 | 68894735 | 68894672 | ID=MS.gene21030.t1.exon3;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68894672 | 68894735 | 68894672 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68895312 | 68895526 | 68895312 | ID=MS.gene21030.t1.exon4;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68895312 | 68895526 | 68895312 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68895603 | 68895779 | 68895603 | ID=MS.gene21030.t1.exon5;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68895603 | 68895779 | 68895603 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68895871 | 68895945 | 68895871 | ID=MS.gene21030.t1.exon6;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68895871 | 68895945 | 68895871 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68896167 | 68896268 | 68896167 | ID=MS.gene21030.t1.exon7;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68896167 | 68896268 | 68896167 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68896366 | 68896483 | 68896366 | ID=MS.gene21030.t1.exon8;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68896366 | 68896483 | 68896366 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68896566 | 68896712 | 68896566 | ID=MS.gene21030.t1.exon9;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68896566 | 68896712 | 68896566 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68896999 | 68897105 | 68896999 | ID=MS.gene21030.t1.exon10;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68896999 | 68897105 | 68896999 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68897207 | 68897320 | 68897207 | ID=MS.gene21030.t1.exon11;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68897207 | 68897320 | 68897207 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| chr1.4 | exon | 68898714 | 68899007 | 68898714 | ID=MS.gene21030.t1.exon12;Parent=MS.gene21030.t1 |
| chr1.4 | CDS | 68898714 | 68899007 | 68898714 | ID=cds.MS.gene21030.t1;Parent=MS.gene21030.t1 |
| Gene Sequence |
| Protein sequence |
