Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68125.t1 | XP_003604081.1 | 97.8 | 414 | 6 | 1 | 1 | 411 | 154 | 567 | 9.40E-219 | 769.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68125.t1 | O22056 | 70.8 | 384 | 111 | 1 | 28 | 411 | 183 | 565 | 6.3e-147 | 521.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68125.t1 | G7J988 | 97.8 | 414 | 6 | 1 | 1 | 411 | 154 | 567 | 6.8e-219 | 769.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene68125 | 0.816948 | 4.25E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene68125 | 0.812203 | 4.77E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene68125 | 0.880691 | 4.46E-70 | -1.69E-46 |
| MS.gene049427 | MS.gene68125 | 0.886358 | 3.67E-72 | -1.69E-46 |
| MS.gene049491 | MS.gene68125 | 0.834396 | 3.07E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene68125 | 0.801396 | 9.18E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene68125 | 0.859973 | 2.85E-63 | -1.69E-46 |
| MS.gene049661 | MS.gene68125 | 0.831272 | 1.83E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene68125 | 0.827682 | 1.37E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene68125 | 0.805558 | 1.26E-49 | -1.69E-46 |
| MS.gene049760 | MS.gene68125 | 0.837381 | 5.37E-57 | -1.69E-46 |
| MS.gene049805 | MS.gene68125 | 0.824311 | 8.64E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene68125 | 0.871396 | 7.06E-67 | -1.69E-46 |
| MS.gene050099 | MS.gene68125 | 0.863081 | 3.21E-64 | -1.69E-46 |
| MS.gene050163 | MS.gene68125 | 0.810972 | 8.84E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene68125 | 0.872981 | 2.09E-67 | -1.69E-46 |
| MS.gene050333 | MS.gene68125 | 0.811124 | 8.19E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene68125 | 0.822388 | 2.43E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene68125 | 0.870914 | 1.02E-66 | -1.69E-46 |
| MS.gene050464 | MS.gene68125 | 0.801226 | 9.95E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene68125 | 0.817012 | 4.11E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene68125 | 0.824576 | 7.49E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene68125 | 0.812928 | 3.31E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene68125 | 0.914269 | 2.34E-84 | -1.69E-46 |
| MS.gene050770 | MS.gene68125 | 0.917347 | 5.93E-86 | -1.69E-46 |
| MS.gene050772 | MS.gene68125 | 0.815201 | 1.04E-51 | -1.69E-46 |
| MS.gene050783 | MS.gene68125 | 0.865273 | 6.65E-65 | -1.69E-46 |
| MS.gene050812 | MS.gene68125 | 0.853293 | 2.63E-61 | -1.69E-46 |
| MS.gene05100 | MS.gene68125 | 0.801991 | 6.93E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene68125 | 0.91316 | 8.49E-84 | -1.69E-46 |
| MS.gene05105 | MS.gene68125 | 0.824161 | 9.38E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene68125 | 0.816621 | 5.03E-52 | -1.69E-46 |
| MS.gene051255 | MS.gene68125 | 0.801951 | 7.07E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene68125 | 0.846401 | 2.22E-59 | -1.69E-46 |
| MS.gene051471 | MS.gene68125 | 0.873762 | 1.14E-67 | -1.69E-46 |
| MS.gene051582 | MS.gene68125 | 0.823631 | 1.25E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene68125 | 0.832806 | 7.66E-56 | -1.69E-46 |
| MS.gene051692 | MS.gene68125 | 0.809107 | 2.23E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene68125 | 0.818718 | 1.69E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene68125 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene051877 | MS.gene68125 | 0.838233 | 3.25E-57 | -1.69E-46 |
| MS.gene052078 | MS.gene68125 | 0.879817 | 9.14E-70 | -1.69E-46 |
| MS.gene052178 | MS.gene68125 | 0.80328 | 3.76E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene68125 | 0.829787 | 4.23E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene68125 | 0.859376 | 4.32E-63 | -1.69E-46 |
| MS.gene052290 | MS.gene68125 | 0.853573 | 2.19E-61 | -1.69E-46 |
| MS.gene052310 | MS.gene68125 | 0.881835 | 1.73E-70 | -1.69E-46 |
| MS.gene052322 | MS.gene68125 | 0.851244 | 1.01E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene68125 | 0.890834 | 6.88E-74 | -1.69E-46 |
| MS.gene052340 | MS.gene68125 | 0.805295 | 1.43E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene68125 | 0.849211 | 3.74E-60 | -1.69E-46 |
| MS.gene052421 | MS.gene68125 | 0.825476 | 4.59E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene68125 | 0.802279 | 6.05E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene68125 | 0.81434 | 1.62E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene68125 | 0.826362 | 2.83E-54 | -1.69E-46 |
| MS.gene052508 | MS.gene68125 | 0.801025 | 1.09E-48 | -1.69E-46 |
| MS.gene052510 | MS.gene68125 | 0.812643 | 3.82E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene68125 | 0.847709 | 9.74E-60 | -1.69E-46 |
| MS.gene053103 | MS.gene68125 | 0.828147 | 1.06E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene68125 | 0.827285 | 1.70E-54 | -1.69E-46 |
| MS.gene053107 | MS.gene68125 | 0.866204 | 3.38E-65 | -1.69E-46 |
| MS.gene053207 | MS.gene68125 | 0.837373 | 5.40E-57 | -1.69E-46 |
| MS.gene053209 | MS.gene68125 | 0.843025 | 1.81E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene68125 | 0.818027 | 2.43E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene68125 | 0.805558 | 1.26E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene68125 | 0.899052 | 2.90E-77 | -1.69E-46 |
| MS.gene053384 | MS.gene68125 | 0.811745 | 6.00E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene68125 | 0.805434 | 1.34E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene68125 | 0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene68125 | 0.805526 | 1.28E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene68125 | 0.85856 | 7.57E-63 | -1.69E-46 |
| MS.gene054376 | MS.gene68125 | 0.919099 | 6.87E-87 | -1.69E-46 |
| MS.gene05455 | MS.gene68125 | 0.870873 | 1.05E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene68125 | 0.814727 | 1.33E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene68125 | 0.917261 | 6.58E-86 | -1.69E-46 |
| MS.gene054803 | MS.gene68125 | 0.918995 | 7.81E-87 | -1.69E-46 |
| MS.gene054804 | MS.gene68125 | 0.919815 | 2.81E-87 | -1.69E-46 |
| MS.gene054955 | MS.gene68125 | 0.803607 | 3.22E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene68125 | 0.817967 | 2.51E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene68125 | 0.816241 | 6.12E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene68125 | 0.81496 | 1.18E-51 | -1.69E-46 |
| MS.gene055254 | MS.gene68125 | 0.849164 | 3.86E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene68125 | 0.880152 | 6.94E-70 | -1.69E-46 |
| MS.gene055390 | MS.gene68125 | 0.871968 | 4.56E-67 | -1.69E-46 |
| MS.gene055397 | MS.gene68125 | 0.879796 | 9.30E-70 | -1.69E-46 |
| MS.gene055412 | MS.gene68125 | 0.852371 | 4.82E-61 | -1.69E-46 |
| MS.gene055422 | MS.gene68125 | 0.858659 | 7.08E-63 | -1.69E-46 |
| MS.gene055428 | MS.gene68125 | 0.855387 | 6.53E-62 | -1.69E-46 |
| MS.gene055499 | MS.gene68125 | 0.880291 | 6.19E-70 | -1.69E-46 |
| MS.gene055605 | MS.gene68125 | 0.812497 | 4.12E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene68125 | 0.840953 | 6.37E-58 | -1.69E-46 |
| MS.gene055638 | MS.gene68125 | 0.813972 | 1.95E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene68125 | 0.867582 | 1.23E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene68125 | 0.817445 | 3.28E-52 | -1.69E-46 |
| MS.gene055896 | MS.gene68125 | 0.855347 | 6.71E-62 | -1.69E-46 |
| MS.gene05592 | MS.gene68125 | 0.854672 | 1.05E-61 | -1.69E-46 |
| MS.gene055930 | MS.gene68125 | 0.833781 | 4.38E-56 | -1.69E-46 |
| MS.gene05602 | MS.gene68125 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene68125 | 0.821913 | 3.14E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene68125 | 0.814752 | 1.31E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene68125 | 0.830263 | 3.24E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene68125 | 0.868787 | 5.04E-66 | -1.69E-46 |
| MS.gene056410 | MS.gene68125 | 0.860828 | 1.57E-63 | -1.69E-46 |
| MS.gene056452 | MS.gene68125 | 0.838441 | 2.87E-57 | -1.69E-46 |
| MS.gene056609 | MS.gene68125 | 0.850341 | 1.81E-60 | -1.69E-46 |
| MS.gene056612 | MS.gene68125 | 0.822323 | 2.52E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene68125 | 0.854307 | 1.34E-61 | -1.69E-46 |
| MS.gene056897 | MS.gene68125 | 0.821922 | 3.12E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene68125 | 0.89249 | 1.51E-74 | -1.69E-46 |
| MS.gene05702 | MS.gene68125 | 0.819888 | 9.17E-53 | -1.69E-46 |
| MS.gene057123 | MS.gene68125 | 0.842769 | 2.11E-58 | -1.69E-46 |
| MS.gene057129 | MS.gene68125 | 0.893271 | 7.34E-75 | -1.69E-46 |
| MS.gene057146 | MS.gene68125 | 0.86101 | 1.39E-63 | -1.69E-46 |
| MS.gene057295 | MS.gene68125 | 0.851723 | 7.37E-61 | -1.69E-46 |
| MS.gene057331 | MS.gene68125 | 0.834683 | 2.60E-56 | -1.69E-46 |
| MS.gene05733 | MS.gene68125 | 0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene68125 | 0.85711 | 2.04E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene68125 | 0.808963 | 2.39E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene68125 | 0.833318 | 5.71E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene68125 | 0.808895 | 2.47E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene68125 | 0.853284 | 2.65E-61 | -1.69E-46 |
| MS.gene058082 | MS.gene68125 | 0.820129 | 8.07E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene68125 | 0.844233 | 8.58E-59 | -1.69E-46 |
| MS.gene058233 | MS.gene68125 | 0.847084 | 1.45E-59 | -1.69E-46 |
| MS.gene058276 | MS.gene68125 | 0.820546 | 6.48E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene68125 | 0.907288 | 5.96E-81 | -1.69E-46 |
| MS.gene058323 | MS.gene68125 | 0.856895 | 2.36E-62 | -1.69E-46 |
| MS.gene058365 | MS.gene68125 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene68125 | 0.902306 | 1.11E-78 | -1.69E-46 |
| MS.gene058787 | MS.gene68125 | 0.83175 | 1.40E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene68125 | 0.811021 | 8.62E-51 | -1.69E-46 |
| MS.gene058903 | MS.gene68125 | 0.822066 | 2.89E-53 | -1.69E-46 |
| MS.gene058993 | MS.gene68125 | 0.86856 | 5.97E-66 | -1.69E-46 |
| MS.gene059029 | MS.gene68125 | 0.824295 | 8.72E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene68125 | 0.847658 | 1.01E-59 | -1.69E-46 |
| MS.gene059326 | MS.gene68125 | 0.8761 | 1.83E-68 | -1.69E-46 |
| MS.gene05934 | MS.gene68125 | 0.816126 | 6.49E-52 | -1.69E-46 |
| MS.gene059518 | MS.gene68125 | 0.834658 | 2.64E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene68125 | 0.868147 | 8.10E-66 | -1.69E-46 |
| MS.gene059597 | MS.gene68125 | 0.839661 | 1.39E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene68125 | 0.85312 | 2.95E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene68125 | 0.886275 | 3.94E-72 | -1.69E-46 |
| MS.gene059688 | MS.gene68125 | 0.868132 | 8.19E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene68125 | 0.871027 | 9.34E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene68125 | 0.872165 | 3.92E-67 | -1.69E-46 |
| MS.gene059708 | MS.gene68125 | 0.816961 | 4.22E-52 | -1.69E-46 |
| MS.gene059858 | MS.gene68125 | 0.825769 | 3.91E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene68125 | 0.840892 | 6.61E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene68125 | 0.816563 | 5.19E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene68125 | 0.92777 | 7.39E-92 | -1.69E-46 |
| MS.gene059974 | MS.gene68125 | 0.814711 | 1.34E-51 | -1.69E-46 |
| MS.gene060005 | MS.gene68125 | 0.839945 | 1.17E-57 | -1.69E-46 |
| MS.gene060193 | MS.gene68125 | 0.844307 | 8.20E-59 | -1.69E-46 |
| MS.gene060356 | MS.gene68125 | 0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene68125 | 0.817335 | 3.48E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene68125 | 0.817085 | 3.96E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene68125 | 0.820803 | 5.65E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene68125 | 0.845618 | 3.63E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene68125 | 0.834532 | 2.84E-56 | -1.69E-46 |
| MS.gene06090 | MS.gene68125 | 0.822485 | 2.31E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene68125 | 0.826768 | 2.26E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene68125 | 0.804268 | 2.34E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene68125 | 0.811209 | 7.85E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene68125 | -0.840394 | 8.93E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene68125 | 0.842506 | 2.48E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene68125 | 0.919319 | 5.22E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68125.t1 | MTR_3g118290 | 97.826 | 414 | 6 | 1 | 1 | 411 | 154 | 567 | 0.0 | 832 |
| MS.gene68125.t1 | MTR_7g101840 | 37.143 | 350 | 215 | 1 | 58 | 402 | 192 | 541 | 1.34e-76 | 248 |
| MS.gene68125.t1 | MTR_1g063850 | 35.484 | 403 | 249 | 5 | 6 | 402 | 148 | 545 | 4.71e-75 | 244 |
| MS.gene68125.t1 | MTR_1g007370 | 30.250 | 400 | 259 | 5 | 20 | 411 | 157 | 544 | 8.42e-61 | 206 |
| MS.gene68125.t1 | MTR_3g033420 | 32.986 | 288 | 188 | 1 | 115 | 402 | 108 | 390 | 1.72e-46 | 164 |
| MS.gene68125.t1 | MTR_0172s0030 | 31.894 | 301 | 195 | 6 | 118 | 411 | 201 | 498 | 2.96e-43 | 158 |
| MS.gene68125.t1 | MTR_3g090900 | 28.571 | 336 | 224 | 7 | 90 | 411 | 177 | 510 | 8.13e-32 | 126 |
| MS.gene68125.t1 | MTR_1g007370 | 27.869 | 244 | 163 | 3 | 20 | 256 | 157 | 394 | 5.07e-31 | 122 |
| MS.gene68125.t1 | MTR_3g090900 | 26.891 | 238 | 159 | 6 | 90 | 313 | 177 | 413 | 2.99e-19 | 89.7 |
| MS.gene68125.t1 | MTR_3g033150 | 30.435 | 138 | 96 | 0 | 265 | 402 | 4 | 141 | 4.94e-15 | 72.4 |
| MS.gene68125.t1 | MTR_3g090900 | 28.022 | 182 | 116 | 6 | 90 | 257 | 177 | 357 | 2.28e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68125.t1 | AT1G08540 | 74.230 | 357 | 92 | 0 | 55 | 411 | 209 | 565 | 0.0 | 556 |
| MS.gene68125.t1 | AT2G36990 | 37.571 | 354 | 220 | 1 | 58 | 411 | 188 | 540 | 1.97e-78 | 252 |
| MS.gene68125.t1 | AT3G53920 | 34.416 | 308 | 196 | 2 | 105 | 411 | 264 | 566 | 2.50e-61 | 208 |
| MS.gene68125.t1 | AT5G13730 | 37.500 | 248 | 150 | 1 | 169 | 411 | 165 | 412 | 7.47e-52 | 179 |
| MS.gene68125.t1 | AT1G64860 | 30.114 | 352 | 224 | 9 | 68 | 411 | 159 | 496 | 4.02e-39 | 147 |
| MS.gene68125.t1 | AT5G24120 | 29.630 | 297 | 204 | 3 | 118 | 411 | 219 | 513 | 4.26e-36 | 139 |
| MS.gene68125.t1 | AT5G24120 | 29.630 | 297 | 204 | 3 | 118 | 411 | 219 | 513 | 4.26e-36 | 139 |
| MS.gene68125.t1 | AT5G24120 | 29.630 | 297 | 204 | 3 | 118 | 411 | 219 | 513 | 4.26e-36 | 139 |
| MS.gene68125.t1 | AT1G64860 | 29.677 | 310 | 197 | 8 | 68 | 369 | 159 | 455 | 1.94e-31 | 125 |
| MS.gene68125.t1 | AT3G53920 | 32.895 | 152 | 97 | 1 | 105 | 256 | 264 | 410 | 1.67e-28 | 116 |
Find 98 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGAGATCTGGGAGCTTT+TGG | 0.189205 | 3.4:+100213781 | None:intergenic |
| GCCAGAAGAGTCAGAGCTTC+TGG | 0.195456 | 3.4:-100215899 | MS.gene68125:CDS |
| CTAAGAAAACGTTTGAATTA+TGG | 0.201254 | 3.4:-100215005 | MS.gene68125:CDS |
| TCTTCGGCTGTTTCAGCTTC+AGG | 0.261013 | 3.4:+100213609 | None:intergenic |
| GAGAGAAACAGGTGATTAAA+TGG | 0.275402 | 3.4:-100213524 | MS.gene68125:CDS |
| ATCAGTTGCTAAGAATTATC+AGG | 0.278584 | 3.4:-100214934 | MS.gene68125:CDS |
| CCCAGAAGCTCTGACTCTTC+TGG | 0.279014 | 3.4:+100215898 | None:intergenic |
| AAACAGTTGTACAGTGAAAA+TGG | 0.280971 | 3.4:-100213880 | MS.gene68125:CDS |
| AACTTTCTGTTCTAGAGATC+TGG | 0.306670 | 3.4:+100213771 | None:intergenic |
| CATTAAGCAGTTCATGAAAA+AGG | 0.308002 | 3.4:-100213580 | MS.gene68125:CDS |
| CAGGTGATTAAATGGAGATT+TGG | 0.320492 | 3.4:-100213516 | MS.gene68125:CDS |
| GAAGAAGTTGCCGAAGCAAC+TGG | 0.327598 | 3.4:-100213841 | MS.gene68125:CDS |
| AGAGAAGTATGATGCTTCTA+AGG | 0.329199 | 3.4:-100214508 | MS.gene68125:CDS |
| TTCAGAGAACTTAATTTCTT+CGG | 0.359443 | 3.4:+100215736 | None:intergenic |
| CCAGCCCACATTTGCTCAAT+GGG | 0.361480 | 3.4:-100215057 | MS.gene68125:CDS |
| GCTAAGAATTATCAGGGATC+TGG | 0.378393 | 3.4:-100214927 | MS.gene68125:CDS |
| TGAAGACACTGCAAGAGATT+GGG | 0.385412 | 3.4:-100213476 | MS.gene68125:CDS |
| TTAAAGTCATCCTCTTGGTT+GGG | 0.385805 | 3.4:+100216022 | None:intergenic |
| TCGGCAACTTCTTCATCGTC+AGG | 0.396141 | 3.4:+100213850 | None:intergenic |
| ATGAAGACACTGCAAGAGAT+TGG | 0.396405 | 3.4:-100213477 | MS.gene68125:CDS |
| GCTCAATGGGCTACAATGGC+AGG | 0.402429 | 3.4:-100215044 | MS.gene68125:CDS |
| AGTTCTCAACCTATGCTCAT+TGG | 0.407789 | 3.4:-100214479 | MS.gene68125:CDS |
| TGAAGATGTTCCATTATATC+TGG | 0.410021 | 3.4:+100216052 | None:intergenic |
| TTAATCACCTGTTTCTCTCT+AGG | 0.411679 | 3.4:+100213528 | None:intergenic |
| TCTCAATCCTAGAGAGAAAC+AGG | 0.412404 | 3.4:-100213535 | MS.gene68125:CDS |
| GCCAGCCCACATTTGCTCAA+TGG | 0.421203 | 3.4:-100215058 | MS.gene68125:CDS |
| CCAGAAGAGTCAGAGCTTCT+GGG | 0.422406 | 3.4:-100215898 | MS.gene68125:CDS |
| AAAGGACCTGGAAAAGGTAT+TGG | 0.433707 | 3.4:-100213562 | MS.gene68125:CDS |
| CATCGACAGCCCAGTTGCTT+CGG | 0.435866 | 3.4:+100213831 | None:intergenic |
| GGCAATGGATACAGCATCTT+CGG | 0.444268 | 3.4:+100216090 | None:intergenic |
| CTGCTTAATGAGCTGTTCTT+CGG | 0.445939 | 3.4:+100213593 | None:intergenic |
| TGCTCATTGGTGGATTAAAC+AGG | 0.447444 | 3.4:-100214466 | MS.gene68125:CDS |
| ACCAGCAGGACCAGATATAA+TGG | 0.448188 | 3.4:-100216062 | MS.gene68125:CDS |
| GGTGGTGGAACCAGACTTGA+AGG | 0.448899 | 3.4:+100215853 | None:intergenic |
| TGGGATGAGTCTGCAAGATC+TGG | 0.448927 | 3.4:-100214907 | MS.gene68125:CDS |
| GCTTAACAGTTCCACATGGT+GGG | 0.453802 | 3.4:-100213931 | MS.gene68125:intron |
| GAGAACTTAATTTCTTCGGA+TGG | 0.458689 | 3.4:+100215740 | None:intergenic |
| GGAAATGATGGGTGTAAGTA+GGG | 0.462570 | 3.4:-100213454 | MS.gene68125:CDS |
| TAAGTTCTCTGAAGGAATAC+AGG | 0.465978 | 3.4:-100215726 | MS.gene68125:intron |
| GGGAAATGATGGGTGTAAGT+AGG | 0.467729 | 3.4:-100213455 | MS.gene68125:CDS |
| CTTGAAGGAGACGATGTTTG+TGG | 0.468675 | 3.4:+100215868 | None:intergenic |
| TCCATTATATCTGGTCCTGC+TGG | 0.469713 | 3.4:+100216061 | None:intergenic |
| GGATGCCGCGGGCTTGTAAG+AGG | 0.472869 | 3.4:-100214534 | MS.gene68125:CDS |
| TCCTGCTGGTCCAGTGGCAA+TGG | 0.473175 | 3.4:+100216075 | None:intergenic |
| AGATCTCTAGAACAGAAAGT+TGG | 0.474573 | 3.4:-100213769 | MS.gene68125:CDS |
| AACATCGTCTCCTTCAAGTC+TGG | 0.484299 | 3.4:-100215863 | MS.gene68125:CDS |
| ATTAAAGTCATCCTCTTGGT+TGG | 0.488896 | 3.4:+100216021 | None:intergenic |
| CTAAGAATTATCAGGGATCT+GGG | 0.490714 | 3.4:-100214926 | MS.gene68125:CDS |
| GATCTCTAGAACAGAAAGTT+GGG | 0.490872 | 3.4:-100213768 | MS.gene68125:CDS |
| GGCTTAACAGTTCCACATGG+TGG | 0.491941 | 3.4:-100213932 | MS.gene68125:intron |
| ACTTTCTGTTCTAGAGATCT+GGG | 0.492366 | 3.4:+100213772 | None:intergenic |
| GCAAGAGATTGGGGAAATGA+TGG | 0.494350 | 3.4:-100213466 | MS.gene68125:CDS |
| TCTCAACCTATGCTCATTGG+TGG | 0.502003 | 3.4:-100214476 | MS.gene68125:CDS |
| GGTGGATTAAACAGGCAGTT+CGG | 0.505718 | 3.4:-100214458 | MS.gene68125:CDS |
| TCCATTGCCACTGGACCAGC+AGG | 0.505748 | 3.4:-100216076 | MS.gene68125:CDS |
| AAAATACTGCTGCAAATGCT+TGG | 0.508949 | 3.4:+100213374 | None:intergenic |
| TGGAGATTTGGTATGGATGA+TGG | 0.516643 | 3.4:-100213504 | MS.gene68125:CDS |
| TAAAGTCATCCTCTTGGTTG+GGG | 0.518243 | 3.4:+100216023 | None:intergenic |
| CATCATTAAAGTCATCCTCT+TGG | 0.522501 | 3.4:+100216017 | None:intergenic |
| ATCTGGTCCTGCTGGTCCAG+TGG | 0.527770 | 3.4:+100216069 | None:intergenic |
| CCCATTGAGCAAATGTGGGC+TGG | 0.527803 | 3.4:+100215057 | None:intergenic |
| GTTGTTCTTAAGTAACGCAA+TGG | 0.530950 | 3.4:+100215788 | None:intergenic |
| TCAAGTCTGGTTCCACCACC+AGG | 0.536953 | 3.4:-100215850 | MS.gene68125:CDS |
| GATTAAATGGAGATTTGGTA+TGG | 0.540033 | 3.4:-100213511 | MS.gene68125:CDS |
| CTTAACAGTTCCACATGGTG+GGG | 0.543723 | 3.4:-100213930 | MS.gene68125:intron |
| AGACTGAAAGTTTAAGACTC+TGG | 0.548233 | 3.4:+100213740 | None:intergenic |
| TGTAGCCCATTGAGCAAATG+TGG | 0.553613 | 3.4:+100215052 | None:intergenic |
| CTCAATGGGCTACAATGGCA+GGG | 0.555592 | 3.4:-100215043 | MS.gene68125:CDS |
| ATTTGCTCAATGGGCTACAA+TGG | 0.559335 | 3.4:-100215048 | MS.gene68125:CDS |
| GAAGAAATTAAGTTCTCTGA+AGG | 0.563158 | 3.4:-100215734 | MS.gene68125:CDS |
| GAAGACACTGCAAGAGATTG+GGG | 0.566948 | 3.4:-100213475 | MS.gene68125:CDS |
| GAGAAGTATGATGCTTCTAA+GGG | 0.570079 | 3.4:-100214507 | MS.gene68125:CDS |
| CAACTGGGCTGTCGATGAAG+AGG | 0.570194 | 3.4:-100213825 | MS.gene68125:CDS |
| AAGAGTCAGAGCTTCTGGGA+AGG | 0.580062 | 3.4:-100215894 | MS.gene68125:CDS |
| GATGCTGTATCCATTGCCAC+TGG | 0.580093 | 3.4:-100216085 | MS.gene68125:CDS |
| TGAGGAACTTGAAGATGTAG+AGG | 0.581553 | 3.4:-100215978 | MS.gene68125:CDS |
| ACTAGTATAGATGCAAGATC+CGG | 0.582105 | 3.4:-100215941 | MS.gene68125:CDS |
| TTTAATCCACCAATGAGCAT+AGG | 0.584506 | 3.4:+100214470 | None:intergenic |
| AATCACTTTCTGTTCAGTCA+AGG | 0.588234 | 3.4:-100214434 | MS.gene68125:CDS |
| GAGTCTGCAAGATCTGGTCC+AGG | 0.588401 | 3.4:-100214901 | MS.gene68125:intron |
| GGTTACAGGAAGGATGCCGC+GGG | 0.590724 | 3.4:-100214545 | MS.gene68125:intron |
| TTAACAGTTCCACATGGTGG+GGG | 0.603234 | 3.4:-100213929 | MS.gene68125:intron |
| AAGAAGTTGCCGAAGCAACT+GGG | 0.609388 | 3.4:-100213840 | MS.gene68125:CDS |
| TCTTCAAGTTCCTCAGAGGT+AGG | 0.609680 | 3.4:+100215986 | None:intergenic |
| TCAGTTGCTAAGAATTATCA+GGG | 0.610615 | 3.4:-100214933 | MS.gene68125:CDS |
| GGGTTACAGGAAGGATGCCG+CGG | 0.612454 | 3.4:-100214546 | MS.gene68125:intron |
| CAAGAGATTGGGGAAATGAT+GGG | 0.622941 | 3.4:-100213465 | MS.gene68125:CDS |
| GATTTGGTATGGATGATGGA+AGG | 0.625281 | 3.4:-100213500 | MS.gene68125:CDS |
| TCACATTTGCCCCAACCAAG+AGG | 0.631557 | 3.4:-100216032 | MS.gene68125:CDS |
| TCAATGGGCTACAATGGCAG+GGG | 0.637790 | 3.4:-100215042 | MS.gene68125:CDS |
| GAACAACAACTAGAACTACA+AGG | 0.641229 | 3.4:-100215772 | MS.gene68125:CDS |
| AAAGCGTGTTCGTACACAAG+AGG | 0.653089 | 3.4:-100215825 | MS.gene68125:CDS |
| GGCAACTTACAAAGTGAAGG+AGG | 0.666025 | 3.4:-100213908 | MS.gene68125:CDS |
| CTGCACCTCTTACAAGCCCG+CGG | 0.671463 | 3.4:+100214529 | None:intergenic |
| TTTGGCTTAACAGTTCCACA+TGG | 0.676694 | 3.4:-100213935 | MS.gene68125:intron |
| TACATCTTCAAGTTCCTCAG+AGG | 0.677856 | 3.4:+100215982 | None:intergenic |
| TGTCGACGAGCCTACCTCTG+AGG | 0.690720 | 3.4:-100215996 | MS.gene68125:CDS |
| GTAGCCCATTGAGCAAATGT+GGG | 0.718383 | 3.4:+100215053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATATAACGATAAATATT+GGG | + | chr3.4:100214024-100214043 | None:intergenic | 15.0% |
| !!! | ATGACAAATTTTAAAACTAT+AGG | - | chr3.4:100214693-100214712 | MS.gene68125:intron | 15.0% |
| !! | GAAAGAATATTAATAGTGAA+AGG | - | chr3.4:100214162-100214181 | MS.gene68125:intron | 20.0% |
| !! | GAAGATATAACGATAAATAT+TGG | + | chr3.4:100214025-100214044 | None:intergenic | 20.0% |
| !! | TATGAGATCCTAAATTATAT+TGG | + | chr3.4:100214360-100214379 | None:intergenic | 20.0% |
| !!! | AGACTTTTTTGCAATATTTT+TGG | - | chr3.4:100215528-100215547 | MS.gene68125:intron | 20.0% |
| !!! | ATAATTCAAACGTTTTCTTA+GGG | + | chr3.4:100214477-100214496 | None:intergenic | 20.0% |
| !!! | ATATAATTTGAAATATGCAC+TGG | - | chr3.4:100214667-100214686 | MS.gene68125:intron | 20.0% |
| !!! | TATAATTTGAAATATGCACT+GGG | - | chr3.4:100214668-100214687 | MS.gene68125:intron | 20.0% |
| !!! | TATTCATTTTTCTGATACAT+TGG | - | chr3.4:100215817-100215836 | MS.gene68125:CDS | 20.0% |
| ! | AACACATCTTAAATCAAAAG+AGG | - | chr3.4:100214757-100214776 | MS.gene68125:intron | 25.0% |
| ! | AAGATAAAGATAATACTCAC+TGG | + | chr3.4:100215085-100215104 | None:intergenic | 25.0% |
| ! | AATGAAAATATTTCCATGCA+TGG | + | chr3.4:100215125-100215144 | None:intergenic | 25.0% |
| ! | ATAGTTAAATGGTTGATTAC+TGG | + | chr3.4:100214907-100214926 | None:intergenic | 25.0% |
| ! | ATCAACTGAATTATCAATCT+AGG | - | chr3.4:100214223-100214242 | MS.gene68125:intron | 25.0% |
| ! | CACAAATTTGAACAAGATTA+GGG | + | chr3.4:100215769-100215788 | None:intergenic | 25.0% |
| ! | CTAAGAAAACGTTTGAATTA+TGG | - | chr3.4:100214476-100214495 | MS.gene68125:CDS | 25.0% |
| ! | TCAGAAAAATGAATATCACA+TGG | + | chr3.4:100215812-100215831 | None:intergenic | 25.0% |
| ! | TTCAGAGAACTTAATTTCTT+CGG | + | chr3.4:100213748-100213767 | None:intergenic | 25.0% |
| !! | AAAGCTTGTTTAGAACAATA+TGG | - | chr3.4:100213943-100213962 | MS.gene68125:intron | 25.0% |
| !! | CAATATTTTGCTAGAAAGTA+CGG | - | chr3.4:100214619-100214638 | MS.gene68125:intron | 25.0% |
| !! | CATAATTCAAACGTTTTCTT+AGG | + | chr3.4:100214478-100214497 | None:intergenic | 25.0% |
| !! | TTGGCAATTTTCAAATAAAC+AGG | + | chr3.4:100215149-100215168 | None:intergenic | 25.0% |
| !! | TTTCTAGCAAAATATTGTAC+AGG | + | chr3.4:100214616-100214635 | None:intergenic | 25.0% |
| !!! | ACCATTTAACTATTTTTCGT+TGG | - | chr3.4:100214914-100214933 | MS.gene68125:CDS | 25.0% |
| !!! | AGACTTTTGTTATAAAACCT+AGG | + | chr3.4:100213809-100213828 | None:intergenic | 25.0% |
| !!! | CCATTTAACTATTTTTCGTT+GGG | - | chr3.4:100214915-100214934 | MS.gene68125:CDS | 25.0% |
| AAACAGTTGTACAGTGAAAA+TGG | - | chr3.4:100215601-100215620 | MS.gene68125:intron | 30.0% | |
| ACTATCTATAAAGTGGTACA+CGG | - | chr3.4:100215465-100215484 | MS.gene68125:intron | 30.0% | |
| AGATCCTAAATTATATTGGC+AGG | + | chr3.4:100214356-100214375 | None:intergenic | 30.0% | |
| ATAACAAAAGTCTACTATCG+CGG | - | chr3.4:100213816-100213835 | MS.gene68125:CDS | 30.0% | |
| ATAACTGTTCATTTGATCAC+AGG | - | chr3.4:100214140-100214159 | MS.gene68125:intron | 30.0% | |
| ATCAGTTGCTAAGAATTATC+AGG | - | chr3.4:100214547-100214566 | MS.gene68125:intron | 30.0% | |
| CATGTTGAATATCACAAGAA+TGG | + | chr3.4:100214847-100214866 | None:intergenic | 30.0% | |
| CATTAAGCAGTTCATGAAAA+AGG | - | chr3.4:100215901-100215920 | MS.gene68125:CDS | 30.0% | |
| CATTCTTGTGATATTCAACA+TGG | - | chr3.4:100214845-100214864 | MS.gene68125:intron | 30.0% | |
| CCCAACGAAAAATAGTTAAA+TGG | + | chr3.4:100214918-100214937 | None:intergenic | 30.0% | |
| CGATAAATATTGGGTGATTT+AGG | + | chr3.4:100214015-100214034 | None:intergenic | 30.0% | |
| GAAGAAATTAAGTTCTCTGA+AGG | - | chr3.4:100213747-100213766 | MS.gene68125:CDS | 30.0% | |
| GCACAAATTTGAACAAGATT+AGG | + | chr3.4:100215770-100215789 | None:intergenic | 30.0% | |
| TCAGTTGCTAAGAATTATCA+GGG | - | chr3.4:100214548-100214567 | MS.gene68125:intron | 30.0% | |
| TCGTTGAACAATCATCAATT+AGG | - | chr3.4:100215337-100215356 | MS.gene68125:intron | 30.0% | |
| TGAAGATGTTCCATTATATC+TGG | + | chr3.4:100213432-100213451 | None:intergenic | 30.0% | |
| TTCTCCTGCCAATATAATTT+AGG | - | chr3.4:100214349-100214368 | MS.gene68125:intron | 30.0% | |
| TTTCAAATTATATCCGTGTG+TGG | + | chr3.4:100214660-100214679 | None:intergenic | 30.0% | |
| ! | AAATTGAGTCATGTGCTTTT+AGG | - | chr3.4:100216062-100216081 | MS.gene68125:CDS | 30.0% |
| ! | CTCTATGAGCTTCTATTTTA+CGG | + | chr3.4:100215197-100215216 | None:intergenic | 30.0% |
| ! | GATTAAATGGAGATTTGGTA+TGG | - | chr3.4:100215970-100215989 | MS.gene68125:CDS | 30.0% |
| ! | TGTAACATTCTTTCCTTTTC+TGG | + | chr3.4:100214117-100214136 | None:intergenic | 30.0% |
| !! | ATGTTGGTTCAACAAAAACA+AGG | - | chr3.4:100215261-100215280 | MS.gene68125:intron | 30.0% |
| !! | TATAAAACCTAGGTTCTAAG+TGG | + | chr3.4:100213799-100213818 | None:intergenic | 30.0% |
| AAAGCTCGAAAAACTTCAAG+AGG | - | chr3.4:100214379-100214398 | MS.gene68125:intron | 35.0% | |
| AATCACTTTCTGTTCAGTCA+AGG | - | chr3.4:100215047-100215066 | MS.gene68125:CDS | 35.0% | |
| AATTATATTGGCAGGAGAAG+AGG | + | chr3.4:100214348-100214367 | None:intergenic | 35.0% | |
| ACCACTTTATAGATAGTCCA+CGG | + | chr3.4:100215462-100215481 | None:intergenic | 35.0% | |
| ACTAGTATAGATGCAAGATC+CGG | - | chr3.4:100213540-100213559 | MS.gene68125:CDS | 35.0% | |
| ATATATCTCAGTGCCAGAAA+AGG | - | chr3.4:100214101-100214120 | MS.gene68125:intron | 35.0% | |
| ATGATTGTTCAACGAGAACA+GGG | + | chr3.4:100215332-100215351 | None:intergenic | 35.0% | |
| ATTAAAGTCATCCTCTTGGT+TGG | + | chr3.4:100213463-100213482 | None:intergenic | 35.0% | |
| CAGGTGATTAAATGGAGATT+TGG | - | chr3.4:100215965-100215984 | MS.gene68125:CDS | 35.0% | |
| CATCATTAAAGTCATCCTCT+TGG | + | chr3.4:100213467-100213486 | None:intergenic | 35.0% | |
| CTAAGAATTATCAGGGATCT+GGG | - | chr3.4:100214555-100214574 | MS.gene68125:intron | 35.0% | |
| CTTGTTCAAATTTGTGCTTC+AGG | - | chr3.4:100215773-100215792 | MS.gene68125:CDS | 35.0% | |
| GAACAACAACTAGAACTACA+AGG | - | chr3.4:100213709-100213728 | MS.gene68125:intron | 35.0% | |
| GAGAACTTAATTTCTTCGGA+TGG | + | chr3.4:100213744-100213763 | None:intergenic | 35.0% | |
| GAGAGAAACAGGTGATTAAA+TGG | - | chr3.4:100215957-100215976 | MS.gene68125:CDS | 35.0% | |
| GTTGTTCTTAAGTAACGCAA+TGG | + | chr3.4:100213696-100213715 | None:intergenic | 35.0% | |
| TATTTCTTTCTGACCATGCA+TGG | - | chr3.4:100215109-100215128 | MS.gene68125:CDS | 35.0% | |
| TGTACAGGTGAAAATATACC+TGG | + | chr3.4:100214601-100214620 | None:intergenic | 35.0% | |
| TTAAAGTCATCCTCTTGGTT+GGG | + | chr3.4:100213462-100213481 | None:intergenic | 35.0% | |
| TTAGTATGAGTCATTGCACT+TGG | - | chr3.4:100214796-100214815 | MS.gene68125:intron | 35.0% | |
| TTGTTGAACCAACATCAATC+AGG | + | chr3.4:100215256-100215275 | None:intergenic | 35.0% | |
| TTTAATCCACCAATGAGCAT+AGG | + | chr3.4:100215014-100215033 | None:intergenic | 35.0% | |
| ! | AGAAGTCATTGTTGGAGTTT+TGG | + | chr3.4:100215168-100215187 | None:intergenic | 35.0% |
| ! | AGACTGAAAGTTTAAGACTC+TGG | + | chr3.4:100215744-100215763 | None:intergenic | 35.0% |
| ! | AGAGAAGTATGATGCTTCTA+AGG | - | chr3.4:100214973-100214992 | MS.gene68125:CDS | 35.0% |
| ! | ATCAAGAGCATATGAGAGAA+TGG | + | chr3.4:100213980-100213999 | None:intergenic | 35.0% |
| ! | GAGAAGTATGATGCTTCTAA+GGG | - | chr3.4:100214974-100214993 | MS.gene68125:CDS | 35.0% |
| ! | TAAGTTCTCTGAAGGAATAC+AGG | - | chr3.4:100213755-100213774 | MS.gene68125:CDS | 35.0% |
| ! | TAGAAAGTACGGACACTAAA+GGG | - | chr3.4:100214630-100214649 | MS.gene68125:intron | 35.0% |
| ! | TGAGCTTCTATTTTACGGAA+TGG | + | chr3.4:100215192-100215211 | None:intergenic | 35.0% |
| ! | TTAATCACCTGTTTCTCTCT+AGG | + | chr3.4:100215956-100215975 | None:intergenic | 35.0% |
| !! | AACTTTCTGTTCTAGAGATC+TGG | + | chr3.4:100215713-100215732 | None:intergenic | 35.0% |
| !! | ACTATTTTTCGTTGGGTTAC+AGG | - | chr3.4:100214922-100214941 | MS.gene68125:CDS | 35.0% |
| !! | ACTTTCTGTTCTAGAGATCT+GGG | + | chr3.4:100215712-100215731 | None:intergenic | 35.0% |
| !! | AGATCTCTAGAACAGAAAGT+TGG | - | chr3.4:100215712-100215731 | MS.gene68125:intron | 35.0% |
| !! | GATCTCTAGAACAGAAAGTT+GGG | - | chr3.4:100215713-100215732 | MS.gene68125:intron | 35.0% |
| !!! | TTCTGGCTTTTCTTTCTGTT+TGG | + | chr3.4:100213569-100213588 | None:intergenic | 35.0% |
| AAGAACTGCAGTCTCAATGT+TGG | + | chr3.4:100213868-100213887 | None:intergenic | 40.0% | |
| AAGAGTCCACACTTCTTCAA+TGG | - | chr3.4:100214879-100214898 | MS.gene68125:intron | 40.0% | |
| ACAATCAACGAATGTTGACG+CGG | + | chr3.4:100215412-100215431 | None:intergenic | 40.0% | |
| AGTTCTCAACCTATGCTCAT+TGG | - | chr3.4:100215002-100215021 | MS.gene68125:CDS | 40.0% | |
| ATAAGTACACCAATTCACCG+TGG | - | chr3.4:100215442-100215461 | MS.gene68125:intron | 40.0% | |
| ATAGATAGTCCACGGTGAAT+TGG | + | chr3.4:100215454-100215473 | None:intergenic | 40.0% | |
| ATGAAGACACTGCAAGAGAT+TGG | - | chr3.4:100216004-100216023 | MS.gene68125:CDS | 40.0% | |
| CAAGAGATTGGGGAAATGAT+GGG | - | chr3.4:100216016-100216035 | MS.gene68125:CDS | 40.0% | |
| CATGAAAAAGGACCTGGAAA+AGG | - | chr3.4:100215913-100215932 | MS.gene68125:CDS | 40.0% | |
| CTGCTTAATGAGCTGTTCTT+CGG | + | chr3.4:100215891-100215910 | None:intergenic | 40.0% | |
| GACATTGACCTGATTGATGT+TGG | - | chr3.4:100215245-100215264 | MS.gene68125:intron | 40.0% | |
| GATGATTGTTCAACGAGAAC+AGG | + | chr3.4:100215333-100215352 | None:intergenic | 40.0% | |
| GCTAAGAATTATCAGGGATC+TGG | - | chr3.4:100214554-100214573 | MS.gene68125:intron | 40.0% | |
| GGAGAAGAGGCAAATGAATT+AGG | + | chr3.4:100214335-100214354 | None:intergenic | 40.0% | |
| TAAAGTCATCCTCTTGGTTG+GGG | + | chr3.4:100213461-100213480 | None:intergenic | 40.0% | |
| TACCACAATCGTTAGTGTGA+CGG | - | chr3.4:100213913-100213932 | MS.gene68125:CDS | 40.0% | |
| TCTCAATCCTAGAGAGAAAC+AGG | - | chr3.4:100215946-100215965 | MS.gene68125:CDS | 40.0% | |
| TGAAGACACTGCAAGAGATT+GGG | - | chr3.4:100216005-100216024 | MS.gene68125:CDS | 40.0% | |
| TGAGGAACTTGAAGATGTAG+AGG | - | chr3.4:100213503-100213522 | MS.gene68125:CDS | 40.0% | |
| TGATTGTTCAACGAGAACAG+GGG | + | chr3.4:100215331-100215350 | None:intergenic | 40.0% | |
| TGCATTACCACTTAGAACCT+AGG | - | chr3.4:100213789-100213808 | MS.gene68125:CDS | 40.0% | |
| ! | AAAGGACCTGGAAAAGGTAT+TGG | - | chr3.4:100215919-100215938 | MS.gene68125:CDS | 40.0% |
| ! | ACCGTGGACTATCTATAAAG+TGG | - | chr3.4:100215458-100215477 | MS.gene68125:intron | 40.0% |
| ! | AGAAAGTACGGACACTAAAG+GGG | - | chr3.4:100214631-100214650 | MS.gene68125:intron | 40.0% |
| ! | CTAGAAAGTACGGACACTAA+AGG | - | chr3.4:100214629-100214648 | MS.gene68125:intron | 40.0% |
| ! | TACATCTTCAAGTTCCTCAG+AGG | + | chr3.4:100213502-100213521 | None:intergenic | 40.0% |
| ! | TGGAGATTTGGTATGGATGA+TGG | - | chr3.4:100215977-100215996 | MS.gene68125:CDS | 40.0% |
| ! | TGGCTTTTCTTTCTGTTTGG+CGG | + | chr3.4:100213566-100213585 | None:intergenic | 40.0% |
| ! | TTTGGCTTAACAGTTCCACA+TGG | - | chr3.4:100215546-100215565 | MS.gene68125:intron | 40.0% |
| ! | TTTTTCGTTGGGTTACAGGA+AGG | - | chr3.4:100214926-100214945 | MS.gene68125:CDS | 40.0% |
| !! | ATTTGCTCAATGGGCTACAA+TGG | - | chr3.4:100214433-100214452 | MS.gene68125:CDS | 40.0% |
| !! | GATTTGGTATGGATGATGGA+AGG | - | chr3.4:100215981-100216000 | MS.gene68125:CDS | 40.0% |
| !! | GGAAATGATGGGTGTAAGTA+GGG | - | chr3.4:100216027-100216046 | MS.gene68125:CDS | 40.0% |
| !! | TGCTCATTGGTGGATTAAAC+AGG | - | chr3.4:100215015-100215034 | MS.gene68125:CDS | 40.0% |
| AAAGCGTGTTCGTACACAAG+AGG | - | chr3.4:100213656-100213675 | MS.gene68125:intron | 45.0% | |
| AACATCGTCTCCTTCAAGTC+TGG | - | chr3.4:100213618-100213637 | MS.gene68125:CDS | 45.0% | |
| AAGAAGTTGCCGAAGCAACT+GGG | - | chr3.4:100215641-100215660 | MS.gene68125:intron | 45.0% | |
| ACCAGCAGGACCAGATATAA+TGG | - | chr3.4:100213419-100213438 | MS.gene68125:CDS | 45.0% | |
| CTGGAACCATTGAAGAAGTG+TGG | + | chr3.4:100214888-100214907 | None:intergenic | 45.0% | |
| CTTAACAGTTCCACATGGTG+GGG | - | chr3.4:100215551-100215570 | MS.gene68125:intron | 45.0% | |
| CTTGAAGGAGACGATGTTTG+TGG | + | chr3.4:100213616-100213635 | None:intergenic | 45.0% | |
| GAAGACACTGCAAGAGATTG+GGG | - | chr3.4:100216006-100216025 | MS.gene68125:CDS | 45.0% | |
| GACCTTGCAGAAAAATGTGG+CGG | - | chr3.4:100214401-100214420 | MS.gene68125:intron | 45.0% | |
| GAGGACCTTGCAGAAAAATG+TGG | - | chr3.4:100214398-100214417 | MS.gene68125:intron | 45.0% | |
| GATTGTTCAACGAGAACAGG+GGG | + | chr3.4:100215330-100215349 | None:intergenic | 45.0% | |
| GCAAGAGATTGGGGAAATGA+TGG | - | chr3.4:100216015-100216034 | MS.gene68125:CDS | 45.0% | |
| GCAGTTCATGAAAAAGGACC+TGG | - | chr3.4:100215907-100215926 | MS.gene68125:CDS | 45.0% | |
| GCTTAACAGTTCCACATGGT+GGG | - | chr3.4:100215550-100215569 | MS.gene68125:intron | 45.0% | |
| GGAATGGCAGAAGTCATTGT+TGG | + | chr3.4:100215176-100215195 | None:intergenic | 45.0% | |
| GGCAACTTACAAAGTGAAGG+AGG | - | chr3.4:100215573-100215592 | MS.gene68125:intron | 45.0% | |
| GGCAATGGATACAGCATCTT+CGG | + | chr3.4:100213394-100213413 | None:intergenic | 45.0% | |
| GTAGCCCATTGAGCAAATGT+GGG | + | chr3.4:100214431-100214450 | None:intergenic | 45.0% | |
| TCCATTATATCTGGTCCTGC+TGG | + | chr3.4:100213423-100213442 | None:intergenic | 45.0% | |
| TCTCAACCTATGCTCATTGG+TGG | - | chr3.4:100215005-100215024 | MS.gene68125:CDS | 45.0% | |
| TGTAGCCCATTGAGCAAATG+TGG | + | chr3.4:100214432-100214451 | None:intergenic | 45.0% | |
| TTAACAGTTCCACATGGTGG+GGG | - | chr3.4:100215552-100215571 | MS.gene68125:intron | 45.0% | |
| ! | AGACCATGAGCTTCTTTTGG+GGG | - | chr3.4:100215386-100215405 | MS.gene68125:intron | 45.0% |
| ! | AGGAGACCATGAGCTTCTTT+TGG | - | chr3.4:100215383-100215402 | MS.gene68125:intron | 45.0% |
| ! | CTAGAGATCTGGGAGCTTTT+GGG | + | chr3.4:100215702-100215721 | None:intergenic | 45.0% |
| ! | GAAAGTACGGACACTAAAGG+GGG | - | chr3.4:100214632-100214651 | MS.gene68125:intron | 45.0% |
| ! | GACTGTCCAATACCTTTTCC+AGG | + | chr3.4:100215928-100215947 | None:intergenic | 45.0% |
| ! | GAGACCATGAGCTTCTTTTG+GGG | - | chr3.4:100215385-100215404 | MS.gene68125:intron | 45.0% |
| ! | GGAGACCATGAGCTTCTTTT+GGG | - | chr3.4:100215384-100215403 | MS.gene68125:intron | 45.0% |
| ! | TAGAGATCTGGGAGCTTTTG+GGG | + | chr3.4:100215701-100215720 | None:intergenic | 45.0% |
| ! | TCTAGAGATCTGGGAGCTTT+TGG | + | chr3.4:100215703-100215722 | None:intergenic | 45.0% |
| ! | TCTTCAAGTTCCTCAGAGGT+AGG | + | chr3.4:100213498-100213517 | None:intergenic | 45.0% |
| ! | TTTTCTTTCTGTTTGGCGGC+CGG | + | chr3.4:100213562-100213581 | None:intergenic | 45.0% |
| !! | GGGAAATGATGGGTGTAAGT+AGG | - | chr3.4:100216026-100216045 | MS.gene68125:CDS | 45.0% |
| !! | GGTGGATTAAACAGGCAGTT+CGG | - | chr3.4:100215023-100215042 | MS.gene68125:CDS | 45.0% |
| !!! | TGTACGAACACGCTTTTTCC+TGG | + | chr3.4:100213652-100213671 | None:intergenic | 45.0% |
| AATGAGGATGAGGAGGACTG+CGG | + | chr3.4:100215220-100215239 | None:intergenic | 50.0% | |
| AGGTCAATGTCCCACCAATG+AGG | + | chr3.4:100215236-100215255 | None:intergenic | 50.0% | |
| AGTCTACTATCGCGGCATCA+TGG | - | chr3.4:100213824-100213843 | MS.gene68125:CDS | 50.0% | |
| ATGTCCCACCAATGAGGATG+AGG | + | chr3.4:100215230-100215249 | None:intergenic | 50.0% | |
| ATTGGTGTGCGTTTCTGACC+AGG | - | chr3.4:100215835-100215854 | MS.gene68125:CDS | 50.0% | |
| CAGGATCAGCAAGTACTTCC+TGG | + | chr3.4:100215856-100215875 | None:intergenic | 50.0% | |
| CCAGAAGAGTCAGAGCTTCT+GGG | - | chr3.4:100213583-100213602 | MS.gene68125:CDS | 50.0% | |
| CCAGCCCACATTTGCTCAAT+GGG | - | chr3.4:100214424-100214443 | MS.gene68125:CDS | 50.0% | |
| GAAGAAGTTGCCGAAGCAAC+TGG | - | chr3.4:100215640-100215659 | MS.gene68125:intron | 50.0% | |
| GATGCTGTATCCATTGCCAC+TGG | - | chr3.4:100213396-100213415 | MS.gene68125:CDS | 50.0% | |
| GGCTTAACAGTTCCACATGG+TGG | - | chr3.4:100215549-100215568 | MS.gene68125:intron | 50.0% | |
| GGGGGCAACTTACAAAGTGA+AGG | - | chr3.4:100215570-100215589 | MS.gene68125:intron | 50.0% | |
| TCACATTTGCCCCAACCAAG+AGG | - | chr3.4:100213449-100213468 | MS.gene68125:CDS | 50.0% | |
| TCCTCCTCATCCTCATTGGT+GGG | - | chr3.4:100215223-100215242 | MS.gene68125:intron | 50.0% | |
| TCGGCAACTTCTTCATCGTC+AGG | + | chr3.4:100215634-100215653 | None:intergenic | 50.0% | |
| TGCCGTCACACTAACGATTG+TGG | + | chr3.4:100213918-100213937 | None:intergenic | 50.0% | |
| TGGGATGAGTCTGCAAGATC+TGG | - | chr3.4:100214574-100214593 | MS.gene68125:intron | 50.0% | |
| ! | AAGAGTCAGAGCTTCTGGGA+AGG | - | chr3.4:100213587-100213606 | MS.gene68125:CDS | 50.0% |
| ! | TCTTCGGCTGTTTCAGCTTC+AGG | + | chr3.4:100215875-100215894 | None:intergenic | 50.0% |
| !! | CTCAATGGGCTACAATGGCA+GGG | - | chr3.4:100214438-100214457 | MS.gene68125:CDS | 50.0% |
| !! | TCAATGGGCTACAATGGCAG+GGG | - | chr3.4:100214439-100214458 | MS.gene68125:CDS | 50.0% |
| !!! | AACACGCTTTTTCCTGGTGG+TGG | + | chr3.4:100213646-100213665 | None:intergenic | 50.0% |
| !!! | ACGAACACGCTTTTTCCTGG+TGG | + | chr3.4:100213649-100213668 | None:intergenic | 50.0% |
| !!! | TGGGAGCTTTTGGGGTCAAA+AGG | + | chr3.4:100215693-100215712 | None:intergenic | 50.0% |
| AGGTCACCATCTCAGTCGTG+CGG | - | chr3.4:100215357-100215376 | MS.gene68125:intron | 55.0% | |
| CAACTGGGCTGTCGATGAAG+AGG | - | chr3.4:100215656-100215675 | MS.gene68125:intron | 55.0% | |
| CATCGACAGCCCAGTTGCTT+CGG | + | chr3.4:100215653-100215672 | None:intergenic | 55.0% | |
| CCCATTGAGCAAATGTGGGC+TGG | + | chr3.4:100214427-100214446 | None:intergenic | 55.0% | |
| GAGTCTGCAAGATCTGGTCC+AGG | - | chr3.4:100214580-100214599 | MS.gene68125:intron | 55.0% | |
| GCAGTCCTCCTCATCCTCAT+TGG | - | chr3.4:100215219-100215238 | MS.gene68125:intron | 55.0% | |
| GCCAGAAGAGTCAGAGCTTC+TGG | - | chr3.4:100213582-100213601 | MS.gene68125:CDS | 55.0% | |
| GCCAGCCCACATTTGCTCAA+TGG | - | chr3.4:100214423-100214442 | MS.gene68125:CDS | 55.0% | |
| GTCCTCCTCATCCTCATTGG+TGG | - | chr3.4:100215222-100215241 | MS.gene68125:intron | 55.0% | |
| TCCCACCAATGAGGATGAGG+AGG | + | chr3.4:100215227-100215246 | None:intergenic | 55.0% | |
| TGTAAGTTGCCCCCACCATG+TGG | + | chr3.4:100215564-100215583 | None:intergenic | 55.0% | |
| ! | CCCAGAAGCTCTGACTCTTC+TGG | + | chr3.4:100213586-100213605 | None:intergenic | 55.0% |
| ! | GGCCGCCACATTTTTCTGCA+AGG | + | chr3.4:100214406-100214425 | None:intergenic | 55.0% |
| ! | TCAAGTCTGGTTCCACCACC+AGG | - | chr3.4:100213631-100213650 | MS.gene68125:intron | 55.0% |
| !! | ACTAAAGGGGGCACCACACA+CGG | - | chr3.4:100214644-100214663 | MS.gene68125:intron | 55.0% |
| !! | GCTCAATGGGCTACAATGGC+AGG | - | chr3.4:100214437-100214456 | MS.gene68125:CDS | 55.0% |
| !! | GGTGGTGGAACCAGACTTGA+AGG | + | chr3.4:100213631-100213650 | None:intergenic | 55.0% |
| ATCTGGTCCTGCTGGTCCAG+TGG | + | chr3.4:100213415-100213434 | None:intergenic | 60.0% | |
| CCATCTCAGTCGTGCGGATG+AGG | - | chr3.4:100215363-100215382 | MS.gene68125:intron | 60.0% | |
| CCTCATCCGCACGACTGAGA+TGG | + | chr3.4:100215366-100215385 | None:intergenic | 60.0% | |
| CGGCCCCCAAAAGAAGCTCA+TGG | + | chr3.4:100215392-100215411 | None:intergenic | 60.0% | |
| CTGCACCTCTTACAAGCCCG+CGG | + | chr3.4:100214955-100214974 | None:intergenic | 60.0% | |
| GGGTTACAGGAAGGATGCCG+CGG | - | chr3.4:100214935-100214954 | MS.gene68125:CDS | 60.0% | |
| GGTTACAGGAAGGATGCCGC+GGG | - | chr3.4:100214936-100214955 | MS.gene68125:CDS | 60.0% | |
| TCCATTGCCACTGGACCAGC+AGG | - | chr3.4:100213405-100213424 | MS.gene68125:CDS | 60.0% | |
| TCCTGCTGGTCCAGTGGCAA+TGG | + | chr3.4:100213409-100213428 | None:intergenic | 60.0% | |
| TGTCGACGAGCCTACCTCTG+AGG | - | chr3.4:100213485-100213504 | MS.gene68125:CDS | 60.0% | |
| GGATGCCGCGGGCTTGTAAG+AGG | - | chr3.4:100214947-100214966 | MS.gene68125:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 100213381 | 100216122 | 100213381 | ID=MS.gene68125 |
| chr3.4 | mRNA | 100213381 | 100216122 | 100213381 | ID=MS.gene68125.t1;Parent=MS.gene68125 |
| chr3.4 | exon | 100215727 | 100216122 | 100215727 | ID=MS.gene68125.t1.exon1;Parent=MS.gene68125.t1 |
| chr3.4 | CDS | 100215727 | 100216122 | 100215727 | ID=cds.MS.gene68125.t1;Parent=MS.gene68125.t1 |
| chr3.4 | exon | 100214902 | 100215132 | 100214902 | ID=MS.gene68125.t1.exon2;Parent=MS.gene68125.t1 |
| chr3.4 | CDS | 100214902 | 100215132 | 100214902 | ID=cds.MS.gene68125.t1;Parent=MS.gene68125.t1 |
| chr3.4 | exon | 100214419 | 100214559 | 100214419 | ID=MS.gene68125.t1.exon3;Parent=MS.gene68125.t1 |
| chr3.4 | CDS | 100214419 | 100214559 | 100214419 | ID=cds.MS.gene68125.t1;Parent=MS.gene68125.t1 |
| chr3.4 | exon | 100213744 | 100213944 | 100213744 | ID=MS.gene68125.t1.exon4;Parent=MS.gene68125.t1 |
| chr3.4 | CDS | 100213744 | 100213944 | 100213744 | ID=cds.MS.gene68125.t1;Parent=MS.gene68125.t1 |
| chr3.4 | exon | 100213381 | 100213646 | 100213381 | ID=MS.gene68125.t1.exon5;Parent=MS.gene68125.t1 |
| chr3.4 | CDS | 100213381 | 100213646 | 100213381 | ID=cds.MS.gene68125.t1;Parent=MS.gene68125.t1 |
| Gene Sequence |
| Protein sequence |
