Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40781.t1 | XP_013469071.1 | 96.1 | 590 | 17 | 3 | 1 | 587 | 1 | 587 | 0.00E+00 | 1076.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40781.t1 | Q8W4E7 | 64.2 | 592 | 202 | 5 | 1 | 585 | 7 | 595 | 3.6e-196 | 686.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40781.t1 | A0A072VM68 | 96.1 | 590 | 17 | 3 | 1 | 587 | 1 | 587 | 0.0e+00 | 1076.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene40781 | 0.827218 | 1.77E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene40781 | 0.815438 | 9.24E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene40781 | 0.830025 | 3.70E-55 | -1.69E-46 |
| MS.gene049257 | MS.gene40781 | 0.830373 | 3.05E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene40781 | 0.805046 | 1.61E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene40781 | 0.815875 | 7.39E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene40781 | 0.844911 | 5.64E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene40781 | 0.823724 | 1.19E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene40781 | 0.816368 | 5.73E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene40781 | 0.803298 | 3.73E-49 | -1.69E-46 |
| MS.gene050400 | MS.gene40781 | 0.83081 | 2.38E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene40781 | 0.802649 | 5.08E-49 | -1.69E-46 |
| MS.gene050553 | MS.gene40781 | 0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene40781 | 0.872223 | 3.75E-67 | -1.69E-46 |
| MS.gene050647 | MS.gene40781 | -0.821582 | 3.74E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene40781 | 0.873037 | 2.00E-67 | -1.69E-46 |
| MS.gene050747 | MS.gene40781 | 0.849385 | 3.34E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene40781 | 0.833193 | 6.14E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene40781 | 0.830674 | 2.57E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene40781 | 0.849237 | 3.68E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene40781 | 0.848437 | 6.13E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene40781 | 0.807682 | 4.49E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene40781 | 0.848701 | 5.18E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene40781 | 0.866134 | 3.56E-65 | -1.69E-46 |
| MS.gene051387 | MS.gene40781 | 0.851834 | 6.86E-61 | -1.69E-46 |
| MS.gene051525 | MS.gene40781 | 0.857697 | 1.37E-62 | -1.69E-46 |
| MS.gene051666 | MS.gene40781 | 0.81433 | 1.63E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene40781 | 0.846471 | 2.13E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene40781 | 0.85189 | 6.61E-61 | -1.69E-46 |
| MS.gene051874 | MS.gene40781 | 0.8018 | 7.59E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene40781 | 0.835381 | 1.73E-56 | -1.69E-46 |
| MS.gene052134 | MS.gene40781 | 0.812192 | 4.80E-51 | -1.69E-46 |
| MS.gene052136 | MS.gene40781 | 0.806627 | 7.50E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene40781 | 0.833352 | 5.60E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene40781 | 0.814622 | 1.40E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene40781 | 0.83818 | 3.35E-57 | -1.69E-46 |
| MS.gene052414 | MS.gene40781 | 0.847721 | 9.67E-60 | -1.69E-46 |
| MS.gene052421 | MS.gene40781 | 0.829226 | 5.80E-55 | -1.69E-46 |
| MS.gene052469 | MS.gene40781 | 0.838243 | 3.23E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene40781 | 0.811039 | 8.55E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene40781 | 0.811785 | 5.88E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene40781 | 0.812924 | 3.32E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene40781 | 0.849501 | 3.11E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene40781 | 0.821851 | 3.24E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene40781 | 0.846012 | 2.84E-59 | -1.69E-46 |
| MS.gene052823 | MS.gene40781 | 0.812002 | 5.28E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene40781 | 0.810863 | 9.33E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene40781 | 0.817522 | 3.16E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene40781 | 0.822525 | 2.26E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene40781 | 0.825118 | 5.58E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene40781 | 0.822908 | 1.84E-53 | -1.69E-46 |
| MS.gene053107 | MS.gene40781 | 0.816167 | 6.36E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene40781 | 0.829777 | 4.26E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene40781 | 0.80036 | 1.50E-48 | -1.69E-46 |
| MS.gene053207 | MS.gene40781 | 0.801885 | 7.29E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene40781 | 0.809471 | 1.86E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene40781 | 0.812706 | 3.71E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene40781 | 0.834136 | 3.57E-56 | -1.69E-46 |
| MS.gene053758 | MS.gene40781 | 0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene40781 | 0.849632 | 2.86E-60 | -1.69E-46 |
| MS.gene053912 | MS.gene40781 | 0.821381 | 4.16E-53 | -1.69E-46 |
| MS.gene054107 | MS.gene40781 | 0.80114 | 1.04E-48 | -1.69E-46 |
| MS.gene054556 | MS.gene40781 | 0.80792 | 3.99E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene40781 | 0.803134 | 4.03E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene40781 | 0.812697 | 3.72E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene40781 | -0.852281 | 5.12E-61 | -1.69E-46 |
| MS.gene054927 | MS.gene40781 | 0.825766 | 3.92E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene40781 | 0.804659 | 1.94E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene40781 | 0.812959 | 3.26E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene40781 | 0.821791 | 3.35E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene40781 | 0.823091 | 1.67E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene40781 | 0.825322 | 4.99E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene40781 | 0.814506 | 1.49E-51 | -1.69E-46 |
| MS.gene055369 | MS.gene40781 | 0.808977 | 2.38E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene40781 | 0.902997 | 5.47E-79 | -1.69E-46 |
| MS.gene05553 | MS.gene40781 | 0.830773 | 2.43E-55 | -1.69E-46 |
| MS.gene05556 | MS.gene40781 | 0.822328 | 2.51E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene40781 | 0.816655 | 4.94E-52 | -1.69E-46 |
| MS.gene055605 | MS.gene40781 | 0.802609 | 5.17E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene40781 | 0.893146 | 8.24E-75 | -1.69E-46 |
| MS.gene055744 | MS.gene40781 | 0.890405 | 1.02E-73 | -1.69E-46 |
| MS.gene05589 | MS.gene40781 | 0.817907 | 2.59E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene40781 | 0.810752 | 9.86E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene40781 | 0.818078 | 2.36E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene40781 | 0.826887 | 2.12E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene40781 | 0.850875 | 1.28E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene40781 | 0.81933 | 1.23E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene40781 | 0.81674 | 4.73E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene40781 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene40781 | 0.809655 | 1.70E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene40781 | 0.857955 | 1.15E-62 | -1.69E-46 |
| MS.gene057019 | MS.gene40781 | 0.847905 | 8.60E-60 | -1.69E-46 |
| MS.gene057076 | MS.gene40781 | 0.852417 | 4.68E-61 | -1.69E-46 |
| MS.gene057124 | MS.gene40781 | 0.823238 | 1.54E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene40781 | 0.815425 | 9.30E-52 | -1.69E-46 |
| MS.gene057332 | MS.gene40781 | 0.837069 | 6.46E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene40781 | 0.817289 | 3.56E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene40781 | 0.830594 | 2.69E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene40781 | 0.842003 | 3.37E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene40781 | 0.805398 | 1.36E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene40781 | 0.818242 | 2.17E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene40781 | 0.829628 | 4.63E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene40781 | 0.800958 | 1.13E-48 | -1.69E-46 |
| MS.gene058007 | MS.gene40781 | 0.85485 | 9.35E-62 | -1.69E-46 |
| MS.gene058019 | MS.gene40781 | 0.840008 | 1.13E-57 | -1.69E-46 |
| MS.gene058090 | MS.gene40781 | 0.816559 | 5.20E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene40781 | 0.858976 | 5.69E-63 | -1.69E-46 |
| MS.gene058338 | MS.gene40781 | 0.824881 | 6.35E-54 | -1.69E-46 |
| MS.gene058376 | MS.gene40781 | 0.821622 | 3.66E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene40781 | 0.841704 | 4.04E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene40781 | 0.867439 | 1.37E-65 | -1.69E-46 |
| MS.gene058700 | MS.gene40781 | 0.894786 | 1.78E-75 | -1.69E-46 |
| MS.gene058838 | MS.gene40781 | 0.84036 | 9.11E-58 | -1.69E-46 |
| MS.gene05883 | MS.gene40781 | 0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene40781 | 0.826777 | 2.25E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene40781 | 0.852831 | 3.57E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene40781 | 0.846498 | 2.09E-59 | -1.69E-46 |
| MS.gene059420 | MS.gene40781 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene059455 | MS.gene40781 | 0.840792 | 7.02E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene40781 | 0.815539 | 8.78E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene40781 | 0.811151 | 8.08E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene40781 | 0.824282 | 8.78E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene40781 | 0.806684 | 7.30E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene40781 | 0.81866 | 1.75E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene40781 | 0.804514 | 2.08E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene40781 | 0.800953 | 1.13E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene40781 | 0.805169 | 1.52E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene40781 | 0.839037 | 2.01E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene40781 | 0.81905 | 1.42E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene40781 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene40781 | 0.849534 | 3.04E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene40781 | 0.819971 | 8.78E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene40781 | 0.829098 | 6.22E-55 | -1.69E-46 |
| MS.gene06097 | MS.gene40781 | 0.801416 | 9.10E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene40781 | 0.872973 | 2.11E-67 | -1.69E-46 |
| MS.gene061231 | MS.gene40781 | 0.856354 | 3.41E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40781.t1 | MTR_1g084140 | 96.102 | 590 | 17 | 3 | 1 | 587 | 1 | 587 | 0.0 | 1136 |
| MS.gene40781.t1 | MTR_4g013240 | 25.159 | 473 | 286 | 15 | 141 | 567 | 30 | 480 | 8.57e-23 | 102 |
| MS.gene40781.t1 | MTR_4g013245 | 23.990 | 421 | 268 | 13 | 162 | 545 | 11 | 416 | 4.37e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40781.t1 | AT5G26820 | 64.189 | 592 | 202 | 5 | 1 | 585 | 7 | 595 | 0.0 | 728 |
| MS.gene40781.t1 | AT5G03570 | 23.819 | 487 | 318 | 13 | 114 | 559 | 5 | 479 | 2.49e-19 | 92.0 |
| MS.gene40781.t1 | AT5G03570 | 23.819 | 487 | 318 | 13 | 114 | 559 | 5 | 479 | 2.49e-19 | 92.0 |
| MS.gene40781.t1 | AT5G03570 | 24.083 | 436 | 282 | 10 | 156 | 559 | 16 | 434 | 2.57e-18 | 88.6 |
| MS.gene40781.t1 | AT5G03570 | 22.461 | 512 | 320 | 13 | 114 | 559 | 5 | 505 | 1.28e-16 | 83.6 |
Find 129 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGATTACAGGATGAAATT+TGG | 0.168385 | 1.2:-59380405 | None:intergenic |
| GCAAACGATCCTTCTCATTT+TGG | 0.171545 | 1.2:+59383072 | MS.gene40781:CDS |
| AAGCTTTGTGGTGTGGCTTT+GGG | 0.232750 | 1.2:+59379930 | MS.gene40781:CDS |
| TCCCTTGGTTGGCAAATTAA+TGG | 0.247945 | 1.2:+59379661 | MS.gene40781:CDS |
| TCGACTCTGGTCAAGCAATT+TGG | 0.274301 | 1.2:+59381278 | MS.gene40781:CDS |
| GAAGCTTTGTGGTGTGGCTT+TGG | 0.281406 | 1.2:+59379929 | MS.gene40781:CDS |
| TAAAATCAATACTGATATTC+TGG | 0.298842 | 1.2:+59378702 | MS.gene40781:CDS |
| GCACACCCTGCTGGGTTATA+TGG | 0.319471 | 1.2:+59378918 | MS.gene40781:CDS |
| GCGTCCATGGTTTGTCGTAT+TGG | 0.321719 | 1.2:+59379887 | MS.gene40781:CDS |
| GCTACTCCGGCACACCCTGC+TGG | 0.330733 | 1.2:+59378909 | MS.gene40781:CDS |
| GGTGAAATGGATGAGATTAA+AGG | 0.336046 | 1.2:-59378376 | None:intergenic |
| CACAGCTGACAGGAGTTAAT+AGG | 0.336528 | 1.2:+59380070 | MS.gene40781:intron |
| AACAGAGAACTTACTGTAAC+AGG | 0.338783 | 1.2:-59380464 | None:intergenic |
| TAACTACTTAACTGTCATTC+AGG | 0.341515 | 1.2:+59379709 | MS.gene40781:CDS |
| CCAGGCTGGGGCAGTTGGGT+TGG | 0.341613 | 1.2:+59381408 | MS.gene40781:intron |
| CAACAGGTTTGTGATGGTTT+AGG | 0.341872 | 1.2:-59380622 | None:intergenic |
| ATCTGCTTAAAAGTTGCTTC+TGG | 0.348836 | 1.2:+59380422 | MS.gene40781:CDS |
| TACTGATATACAATTGGAAT+TGG | 0.354236 | 1.2:+59378612 | MS.gene40781:CDS |
| AGAAGTTGCTGTTGCAAGTC+TGG | 0.361361 | 1.2:+59383017 | MS.gene40781:CDS |
| GGGGCGCAAATTATCCAAAC+TGG | 0.362063 | 1.2:+59382958 | MS.gene40781:CDS |
| GGGTTGCAAATGAGCGTGAC+TGG | 0.367569 | 1.2:+59379952 | MS.gene40781:CDS |
| ATGCAGGAACTCTCGGTAAA+TGG | 0.371611 | 1.2:-59379685 | None:intergenic |
| CTCTTGCCAGTTGCTGTGGT+GGG | 0.374283 | 1.2:+59379605 | MS.gene40781:CDS |
| TCCATCATTGGAGGATTTAG+TGG | 0.389879 | 1.2:+59381215 | MS.gene40781:CDS |
| TTTGTCGTATTGGTTTCAGC+TGG | 0.397742 | 1.2:+59379897 | MS.gene40781:CDS |
| AACGAATACTGATATACAAT+TGG | 0.400757 | 1.2:+59378606 | MS.gene40781:CDS |
| AAGAAACCCACCACAGCAAC+TGG | 0.408080 | 1.2:-59379611 | None:intergenic |
| CTACATTGCTTCTGCGTCCA+TGG | 0.410181 | 1.2:+59379874 | MS.gene40781:CDS |
| AACATTCGTGTCTTCGACTC+TGG | 0.414974 | 1.2:+59381265 | MS.gene40781:CDS |
| TGGATGATGGGATCCCAGTT+TGG | 0.424363 | 1.2:-59382972 | None:intergenic |
| ATAGCTGGAGCATTGCTGTT+TGG | 0.430015 | 1.2:+59380371 | MS.gene40781:CDS |
| TGGTGGAAAACCAGTTGTTA+AGG | 0.430182 | 1.2:+59380757 | MS.gene40781:intron |
| ACTAAAGTGGCTATAATTGT+TGG | 0.430851 | 1.2:+59379635 | MS.gene40781:CDS |
| ATGAGATTTGCTTTGGATGA+TGG | 0.434327 | 1.2:-59382985 | None:intergenic |
| AGTTGCTTCTGGCTTAATGA+TGG | 0.436477 | 1.2:+59380433 | MS.gene40781:CDS |
| CAGGATGAAATTTGGAAAGA+AGG | 0.437395 | 1.2:-59380397 | None:intergenic |
| TTTGCTTGTGCAAGTGCGAC+TGG | 0.446486 | 1.2:-59380093 | None:intergenic |
| TATAATTGTTGGTGGTCCCT+TGG | 0.449655 | 1.2:+59379646 | MS.gene40781:CDS |
| CCTCTTGCCAGTTGCTGTGG+TGG | 0.452842 | 1.2:+59379604 | MS.gene40781:CDS |
| TAATACCTCTGAGTGATAGA+AGG | 0.457733 | 1.2:-59378474 | None:intergenic |
| AGTCCCGATGAGATTTGCTT+TGG | 0.459197 | 1.2:-59382992 | None:intergenic |
| TTGTCGTATTGGTTTCAGCT+GGG | 0.460813 | 1.2:+59379898 | MS.gene40781:CDS |
| GGCTTACATCCATCCATCAT+TGG | 0.464689 | 1.2:+59381203 | MS.gene40781:intron |
| TTCATCGAATGATCTGCAAC+AGG | 0.464699 | 1.2:-59380638 | None:intergenic |
| AAGAAGGAGGAATGGTGAAA+TGG | 0.466110 | 1.2:-59378389 | None:intergenic |
| CAGCATGGATGTTCTGTAGA+TGG | 0.466645 | 1.2:+59383133 | MS.gene40781:CDS |
| AGCTTTGTGGTGTGGCTTTG+GGG | 0.469755 | 1.2:+59379931 | MS.gene40781:CDS |
| TGATAGAAGGATAGTAATTG+AGG | 0.470293 | 1.2:-59378461 | None:intergenic |
| GGTGGAAAACCAGTTGTTAA+GGG | 0.471640 | 1.2:+59380758 | MS.gene40781:intron |
| GCATCAGATGCTGACAGTAT+AGG | 0.471700 | 1.2:+59380667 | MS.gene40781:CDS |
| GGGGCTATTGAGAAGCTTTG+TGG | 0.472566 | 1.2:+59379918 | MS.gene40781:CDS |
| TTTCTACCGGCGTTCTTGAC+CGG | 0.483139 | 1.2:+59380599 | MS.gene40781:CDS |
| TCCACTAAATCCTCCAATGA+TGG | 0.486598 | 1.2:-59381216 | None:intergenic |
| AAAACCAGTTGTTAAGGGTC+TGG | 0.491610 | 1.2:+59380763 | MS.gene40781:intron |
| TGAGATTTGCTTTGGATGAT+GGG | 0.493099 | 1.2:-59382984 | None:intergenic |
| CTCGGCTGGAAAGAGTATCT+TGG | 0.496656 | 1.2:+59380797 | MS.gene40781:CDS |
| GGTTTATTTCCACAGCTGAC+AGG | 0.500274 | 1.2:+59380060 | MS.gene40781:intron |
| GGAATTGGATCATGTTAATG+AGG | 0.503114 | 1.2:+59378627 | MS.gene40781:CDS |
| GAAGGTCGATGCGAGAAAGA+AGG | 0.503286 | 1.2:-59378405 | None:intergenic |
| CTACTCCGGCACACCCTGCT+GGG | 0.504482 | 1.2:+59378910 | MS.gene40781:CDS |
| TGGAAGCTATCAAGCTCGGC+TGG | 0.508035 | 1.2:+59380783 | MS.gene40781:CDS |
| CATCCAAAGCAAATCTCATC+GGG | 0.512204 | 1.2:+59382989 | MS.gene40781:CDS |
| ATTGTTGGTGGTCCCTTGGT+TGG | 0.518606 | 1.2:+59379650 | MS.gene40781:CDS |
| GCAATACTAGCAGGAAGGAC+TGG | 0.519217 | 1.2:-59380824 | None:intergenic |
| GGTGGGTTTCTTCACTAAAG+TGG | 0.522472 | 1.2:+59379622 | MS.gene40781:CDS |
| TCAAGCTTTATTTCTCAGCA+TGG | 0.524182 | 1.2:+59381435 | MS.gene40781:CDS |
| ATCCCACCATATAACCCAGC+AGG | 0.525279 | 1.2:-59378924 | None:intergenic |
| AAGCCTCTTGCCAGTTGCTG+TGG | 0.527013 | 1.2:+59379601 | MS.gene40781:CDS |
| TCCTTCCTGCTAGTATTGCG+TGG | 0.529013 | 1.2:+59380828 | MS.gene40781:CDS |
| TATTGAGAAGCTTTGTGGTG+TGG | 0.529833 | 1.2:+59379923 | MS.gene40781:CDS |
| TAGTTATATGCAGGAACTCT+CGG | 0.530737 | 1.2:-59379692 | None:intergenic |
| TTACAATCAGAAACAAGAAA+AGG | 0.537721 | 1.2:-59381507 | None:intergenic |
| AACGCCGGTAGAAAGCTTGT+TGG | 0.538024 | 1.2:-59380590 | None:intergenic |
| ACAGTTAAGTAGTTATATGC+AGG | 0.538293 | 1.2:-59379701 | None:intergenic |
| GTTGCTTCTGGCTTAATGAT+GGG | 0.540232 | 1.2:+59380434 | MS.gene40781:CDS |
| TCCATTAATTTGCCAACCAA+GGG | 0.542107 | 1.2:-59379662 | None:intergenic |
| AATGTTGTCTCTTCTATCAG+TGG | 0.542189 | 1.2:+59383104 | MS.gene40781:CDS |
| TGAGCGTGACTGGGTTGTGC+TGG | 0.542195 | 1.2:+59379962 | MS.gene40781:CDS |
| TTAACCAACAAGCTTTCTAC+CGG | 0.542347 | 1.2:+59380586 | MS.gene40781:CDS |
| TATAACCCAGCAGGGTGTGC+CGG | 0.542542 | 1.2:-59378915 | None:intergenic |
| GTCCATTAATTTGCCAACCA+AGG | 0.544175 | 1.2:-59379663 | None:intergenic |
| TTGTCTCTTCTATCAGTGGT+TGG | 0.547810 | 1.2:+59383108 | MS.gene40781:CDS |
| ACATGTCATATGATGTCGTA+GGG | 0.548784 | 1.2:+59382938 | MS.gene40781:CDS |
| CTAAATCCTCCAATGATGGA+TGG | 0.550468 | 1.2:-59381212 | None:intergenic |
| TTCAATATTGTTCTTACACC+AGG | 0.554964 | 1.2:+59380863 | MS.gene40781:CDS |
| AGCACCCACGCAATACTAGC+AGG | 0.557563 | 1.2:-59380833 | None:intergenic |
| ACATGTTCTTGCAGCTACTC+CGG | 0.558596 | 1.2:+59378896 | MS.gene40781:CDS |
| CAAGAGGCTTGAATGAATCA+AGG | 0.559351 | 1.2:-59379588 | None:intergenic |
| GCTTTGTGGTGTGGCTTTGG+GGG | 0.562182 | 1.2:+59379932 | MS.gene40781:CDS |
| CTGGCAGAGTCTCTAATGCT+TGG | 0.562890 | 1.2:+59383036 | MS.gene40781:CDS |
| CCTTCCTGCTAGTATTGCGT+GGG | 0.565115 | 1.2:+59380829 | MS.gene40781:CDS |
| AGAAACAAGAAAAGGAGAAG+AGG | 0.569930 | 1.2:-59381499 | None:intergenic |
| TGAATCAAGGCAATGGCAGA+AGG | 0.572956 | 1.2:-59379575 | None:intergenic |
| TATCAGTGGTTGGTGCAGCA+TGG | 0.573779 | 1.2:+59383118 | MS.gene40781:CDS |
| GAAATGGATGAGATTAAAGG+AGG | 0.575293 | 1.2:-59378373 | None:intergenic |
| TCATCCAAAGCAAATCTCAT+CGG | 0.577100 | 1.2:+59382988 | MS.gene40781:CDS |
| ATGCGAGAAAGAAGGAGGAA+TGG | 0.580051 | 1.2:-59378397 | None:intergenic |
| AATGCTGTCATCAAACTGCC+TGG | 0.581730 | 1.2:-59380881 | None:intergenic |
| GGTTGCAAATGAGCGTGACT+GGG | 0.583770 | 1.2:+59379953 | MS.gene40781:CDS |
| TGTCGTATTGGTTTCAGCTG+GGG | 0.584794 | 1.2:+59379899 | MS.gene40781:CDS |
| CGATAGCGTAATCTCGAAGA+AGG | 0.585822 | 1.2:-59378423 | None:intergenic |
| GCTAAACATCCAAAATGAGA+AGG | 0.588441 | 1.2:-59383081 | None:intergenic |
| AAAGTGGCTATAATTGTTGG+TGG | 0.593039 | 1.2:+59379638 | MS.gene40781:CDS |
| AATCAATACTGATATTCTGG+TGG | 0.598210 | 1.2:+59378705 | MS.gene40781:CDS |
| GTTAATGAGGATAAGAGTGA+AGG | 0.602355 | 1.2:+59378640 | MS.gene40781:CDS |
| AGGTTTGTGATGGTTTAGGC+CGG | 0.604701 | 1.2:-59380618 | None:intergenic |
| GAAACCAATACGACAAACCA+TGG | 0.610451 | 1.2:-59379891 | None:intergenic |
| AAATGGATGAGATTAAAGGA+GGG | 0.610645 | 1.2:-59378372 | None:intergenic |
| GCTTGAATGAATCAAGGCAA+TGG | 0.619193 | 1.2:-59379582 | None:intergenic |
| TTACATCCATCCATCATTGG+AGG | 0.619549 | 1.2:+59381206 | MS.gene40781:CDS |
| TCGAATTGATCTGTTATCTG+AGG | 0.619996 | 1.2:+59380128 | MS.gene40781:CDS |
| GGTCTGGAAGCTATCAAGCT+CGG | 0.620628 | 1.2:+59380779 | MS.gene40781:CDS |
| CACATGTCATATGATGTCGT+AGG | 0.620963 | 1.2:+59382937 | MS.gene40781:CDS |
| GATCTGCAACAGGTTTGTGA+TGG | 0.622696 | 1.2:-59380628 | None:intergenic |
| CCACCACAGCAACTGGCAAG+AGG | 0.629861 | 1.2:-59379604 | None:intergenic |
| GGGCGCAAATTATCCAAACT+GGG | 0.634115 | 1.2:+59382959 | MS.gene40781:CDS |
| AGCAATGTAGACACTGAAGT+AGG | 0.635319 | 1.2:-59379861 | None:intergenic |
| CCCACGCAATACTAGCAGGA+AGG | 0.637832 | 1.2:-59380829 | None:intergenic |
| GGTCGATGCGAGAAAGAAGG+AGG | 0.638044 | 1.2:-59378402 | None:intergenic |
| GCTGTTGCTGTATATATGAG+TGG | 0.644425 | 1.2:+59381457 | MS.gene40781:CDS |
| AATGTAGACACTGAAGTAGG+AGG | 0.659268 | 1.2:-59379858 | None:intergenic |
| TTTAGGCCGGTCAAGAACGC+CGG | 0.663850 | 1.2:-59380605 | None:intergenic |
| TTACATAAATATCAAAACTG+AGG | 0.665722 | 1.2:-59383201 | None:intergenic |
| TCCCACCATATAACCCAGCA+GGG | 0.668296 | 1.2:-59378923 | None:intergenic |
| TGTCAAGACAGTATCTACAA+AGG | 0.690460 | 1.2:-59378761 | None:intergenic |
| CAAGACAGTATCTACAAAGG+CGG | 0.696073 | 1.2:-59378758 | None:intergenic |
| ACTATCCTTCTATCACTCAG+AGG | 0.699376 | 1.2:+59378469 | MS.gene40781:CDS |
| CATGTCATATGATGTCGTAG+GGG | 0.709264 | 1.2:+59382939 | MS.gene40781:CDS |
| AGCTGCTGATAGTAACTGAG+TGG | 0.727569 | 1.2:-59379811 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATAAATAATATGCAATTT+GGG | - | chr1.2:59382798-59382817 | None:intergenic | 15.0% |
| !! | TAATTATTTATGATTCTTAG+TGG | + | chr1.2:59380039-59380058 | MS.gene40781:intron | 15.0% |
| !! | TGAATAAATAATATGCAATT+TGG | - | chr1.2:59382799-59382818 | None:intergenic | 15.0% |
| !! | TTGAAAATAAAGAATTTACA+AGG | - | chr1.2:59382599-59382618 | None:intergenic | 15.0% |
| !!! | AAAATAGAATGATTGATTTT+AGG | - | chr1.2:59379784-59379803 | None:intergenic | 15.0% |
| !!! | ATATCAGTATTGATTTTAAT+CGG | - | chr1.2:59378700-59378719 | None:intergenic | 15.0% |
| !!! | TTTTTCAAAGGAAAAATAAT+TGG | - | chr1.2:59381731-59381750 | None:intergenic | 15.0% |
| !! | AAAAATAAAAGTGATCCAAA+AGG | + | chr1.2:59381890-59381909 | MS.gene40781:intron | 20.0% |
| !! | AAAATAAAAGTGATCCAAAA+GGG | + | chr1.2:59381891-59381910 | MS.gene40781:intron | 20.0% |
| !! | AAATAAATTAGTGACCTAAA+TGG | + | chr1.2:59382528-59382547 | MS.gene40781:intron | 20.0% |
| !! | AACATTGCAAATTGTTTATA+GGG | + | chr1.2:59382242-59382261 | MS.gene40781:intron | 20.0% |
| !! | AATGTGCATTATATATTTGA+TGG | + | chr1.2:59382022-59382041 | MS.gene40781:intron | 20.0% |
| !! | ATAGAGAAAATACAAAGTTA+TGG | + | chr1.2:59381964-59381983 | MS.gene40781:intron | 20.0% |
| !! | ATTTAGGTCACTAATTTATT+TGG | - | chr1.2:59382529-59382548 | None:intergenic | 20.0% |
| !! | GAAATTCGAACTTATATAAA+TGG | - | chr1.2:59378530-59378549 | None:intergenic | 20.0% |
| !! | TAAAATCAATACTGATATTC+TGG | + | chr1.2:59378702-59378721 | MS.gene40781:CDS | 20.0% |
| !! | TAACATTGCAAATTGTTTAT+AGG | + | chr1.2:59382241-59382260 | MS.gene40781:intron | 20.0% |
| !! | TAGAGAAAATACAAAGTTAT+GGG | + | chr1.2:59381965-59381984 | MS.gene40781:intron | 20.0% |
| !! | TATGTATGAAATCACAAAAT+AGG | - | chr1.2:59379235-59379254 | None:intergenic | 20.0% |
| !! | TTCATGAGACAATAATAAAT+TGG | - | chr1.2:59380279-59380298 | None:intergenic | 20.0% |
| !! | TTTATTCAAACAATGACTAA+AGG | - | chr1.2:59381873-59381892 | None:intergenic | 20.0% |
| !!! | AAATCAATCATTCTATTTTC+AGG | + | chr1.2:59379785-59379804 | MS.gene40781:intron | 20.0% |
| !!! | CATTGTTTCTTATCTTTTTA+TGG | + | chr1.2:59378837-59378856 | MS.gene40781:intron | 20.0% |
| !!! | TAAAAGTATGCTAATTAACT+TGG | - | chr1.2:59380165-59380184 | None:intergenic | 20.0% |
| !!! | TGTATTTTCTCTATATTTCA+AGG | - | chr1.2:59381958-59381977 | None:intergenic | 20.0% |
| !!! | TTTAAAATTGTGTCTTTCTT+CGG | + | chr1.2:59379082-59379101 | MS.gene40781:intron | 20.0% |
| ! | AAATAAAAGTGATCCAAAAG+GGG | + | chr1.2:59381892-59381911 | MS.gene40781:intron | 25.0% |
| ! | AAATAACAAACTACATGTCA+AGG | - | chr1.2:59380015-59380034 | None:intergenic | 25.0% |
| ! | AACACATGATATTTGTAAAG+AGG | - | chr1.2:59382390-59382409 | None:intergenic | 25.0% |
| ! | AACGAATACTGATATACAAT+TGG | + | chr1.2:59378606-59378625 | MS.gene40781:CDS | 25.0% |
| ! | AATAACAAACTACATGTCAA+GGG | - | chr1.2:59380014-59380033 | None:intergenic | 25.0% |
| ! | ACACATGATATTTGTAAAGA+GGG | - | chr1.2:59382389-59382408 | None:intergenic | 25.0% |
| ! | ACATTGCAAATTGTTTATAG+GGG | + | chr1.2:59382243-59382262 | MS.gene40781:intron | 25.0% |
| ! | AGTATATGCTTATATCTATC+TGG | + | chr1.2:59380737-59380756 | MS.gene40781:intron | 25.0% |
| ! | ATATATTTGGATATGGACAA+AGG | + | chr1.2:59382271-59382290 | MS.gene40781:intron | 25.0% |
| ! | ATTTCAAGGACAAAATTCAT+AGG | - | chr1.2:59381944-59381963 | None:intergenic | 25.0% |
| ! | CTAAGACAACATATATGATA+TGG | - | chr1.2:59378980-59378999 | None:intergenic | 25.0% |
| ! | CTTAGATACCAAATATCAAA+GGG | - | chr1.2:59381552-59381571 | None:intergenic | 25.0% |
| ! | GGAAAGAATATATTTGGATA+TGG | + | chr1.2:59382264-59382283 | MS.gene40781:intron | 25.0% |
| ! | GTATGTGAAAATTTCCTAAA+TGG | + | chr1.2:59380918-59380937 | MS.gene40781:intron | 25.0% |
| ! | TAACCTAAAAAACTAATCCT+CGG | - | chr1.2:59381142-59381161 | None:intergenic | 25.0% |
| ! | TACTGATATACAATTGGAAT+TGG | + | chr1.2:59378612-59378631 | MS.gene40781:CDS | 25.0% |
| ! | TATAGGGGAAAGAATATATT+TGG | + | chr1.2:59382258-59382277 | MS.gene40781:intron | 25.0% |
| ! | TATTGTCTCATGAAATATTC+AGG | + | chr1.2:59380285-59380304 | MS.gene40781:intron | 25.0% |
| ! | TCTTAGATACCAAATATCAA+AGG | - | chr1.2:59381553-59381572 | None:intergenic | 25.0% |
| ! | TGATATGGATGTAGTTATTA+AGG | - | chr1.2:59378965-59378984 | None:intergenic | 25.0% |
| ! | TGATTGTAAGTCACTAAAAA+AGG | + | chr1.2:59381521-59381540 | MS.gene40781:intron | 25.0% |
| ! | TGTATGAGTGAAAAAAGATT+TGG | + | chr1.2:59382768-59382787 | MS.gene40781:intron | 25.0% |
| ! | TTACAATCAGAAACAAGAAA+AGG | - | chr1.2:59381510-59381529 | None:intergenic | 25.0% |
| ! | TTACATTCCACAAGTAAATA+GGG | - | chr1.2:59379156-59379175 | None:intergenic | 25.0% |
| ! | TTCAAACGATCTTACAAAAA+AGG | - | chr1.2:59382426-59382445 | None:intergenic | 25.0% |
| ! | TTCAAAGGAAAAATAATTGG+AGG | - | chr1.2:59381728-59381747 | None:intergenic | 25.0% |
| ! | TTCAGGAGACAATAATAAAT+TGG | - | chr1.2:59380199-59380218 | None:intergenic | 25.0% |
| ! | TTTACATTCCACAAGTAAAT+AGG | - | chr1.2:59379157-59379176 | None:intergenic | 25.0% |
| !! | ATATCCTGCTTGATTTTATA+AGG | - | chr1.2:59379751-59379770 | None:intergenic | 25.0% |
| !! | TAGCATACTTTTATACTTCT+CGG | + | chr1.2:59380172-59380191 | MS.gene40781:intron | 25.0% |
| !! | TTGAAAATATTCTCTTTTCC+AGG | + | chr1.2:59381390-59381409 | MS.gene40781:intron | 25.0% |
| !!! | ATTTGTCATCGATTTTTCAA+AGG | - | chr1.2:59381743-59381762 | None:intergenic | 25.0% |
| !!! | ATTTTTCAATTTCAGATAGC+TGG | + | chr1.2:59380356-59380375 | MS.gene40781:intron | 25.0% |
| !!! | CATTTTTTGAAATGCAAACT+TGG | + | chr1.2:59382817-59382836 | MS.gene40781:intron | 25.0% |
| !!! | TCCTTTTCCTTGTTTTATTT+GGG | + | chr1.2:59381115-59381134 | MS.gene40781:intron | 25.0% |
| !!! | TGTTTCTACAGATTTTATCA+CGG | + | chr1.2:59382908-59382927 | MS.gene40781:intron | 25.0% |
| !!! | TTATGGTTTGTTATGTATGT+AGG | + | chr1.2:59378854-59378873 | MS.gene40781:intron | 25.0% |
| !!! | TTCCTTTTCCTTGTTTTATT+TGG | + | chr1.2:59381114-59381133 | MS.gene40781:intron | 25.0% |
| AAATACAAAGTTATGGGACA+AGG | + | chr1.2:59381971-59381990 | MS.gene40781:intron | 30.0% | |
| AAATGCTGAAAATCTTACGT+TGG | + | chr1.2:59379258-59379277 | MS.gene40781:intron | 30.0% | |
| AAATGGATGAGATTAAAGGA+GGG | - | chr1.2:59378375-59378394 | None:intergenic | 30.0% | |
| AACAATCCATATCACCATTT+AGG | - | chr1.2:59382545-59382564 | None:intergenic | 30.0% | |
| AATCAATACTGATATTCTGG+TGG | + | chr1.2:59378705-59378724 | MS.gene40781:CDS | 30.0% | |
| AATTTGTGAGTTTCAAAGTC+AGG | - | chr1.2:59380339-59380358 | None:intergenic | 30.0% | |
| ACAGTTAAGTAGTTATATGC+AGG | - | chr1.2:59379704-59379723 | None:intergenic | 30.0% | |
| ACTAAAGTGGCTATAATTGT+TGG | + | chr1.2:59379635-59379654 | MS.gene40781:CDS | 30.0% | |
| ACTGAGGATGATAAGAAAAA+AGG | - | chr1.2:59383188-59383207 | None:intergenic | 30.0% | |
| ACTTCTTTCAAGCTTCAAAT+AGG | + | chr1.2:59382171-59382190 | MS.gene40781:intron | 30.0% | |
| AGAAAGTTCCTGAATATTTC+AGG | - | chr1.2:59380216-59380235 | None:intergenic | 30.0% | |
| AGTGCTTTCATTTGTTTGAT+TGG | + | chr1.2:59379310-59379329 | MS.gene40781:intron | 30.0% | |
| ATATGCTTATATCTATCTGG+TGG | + | chr1.2:59380740-59380759 | MS.gene40781:intron | 30.0% | |
| ATCAATCCCTATAGTAACTT+TGG | - | chr1.2:59382090-59382109 | None:intergenic | 30.0% | |
| ATTCCATATGTATAGAGCAA+TGG | - | chr1.2:59379196-59379215 | None:intergenic | 30.0% | |
| ATTTGTGAGTTTCAAAGTCA+GGG | - | chr1.2:59380338-59380357 | None:intergenic | 30.0% | |
| CAAACATCAATAAGTGTACA+AGG | - | chr1.2:59379445-59379464 | None:intergenic | 30.0% | |
| GACGATCACTATTTACAAAA+AGG | - | chr1.2:59382323-59382342 | None:intergenic | 30.0% | |
| GTGATAAAATCTGTAGAAAC+AGG | - | chr1.2:59382909-59382928 | None:intergenic | 30.0% | |
| GTGCATTATATATTTGATGG+TGG | + | chr1.2:59382025-59382044 | MS.gene40781:intron | 30.0% | |
| TAACTACTTAACTGTCATTC+AGG | + | chr1.2:59379709-59379728 | MS.gene40781:CDS | 30.0% | |
| TACACTTATTGATGTTTGTG+TGG | + | chr1.2:59379447-59379466 | MS.gene40781:intron | 30.0% | |
| TACATTCCACAAGTAAATAG+GGG | - | chr1.2:59379155-59379174 | None:intergenic | 30.0% | |
| TATCCATTGCTCTATACATA+TGG | + | chr1.2:59379190-59379209 | MS.gene40781:intron | 30.0% | |
| TATGTATAGAGCAATGGATA+CGG | - | chr1.2:59379190-59379209 | None:intergenic | 30.0% | |
| TATTGTCTCCTGAAATATTC+AGG | + | chr1.2:59380205-59380224 | MS.gene40781:intron | 30.0% | |
| TCCCAAATAAAACAAGGAAA+AGG | - | chr1.2:59381119-59381138 | None:intergenic | 30.0% | |
| TGATAGAAGGATAGTAATTG+AGG | - | chr1.2:59378464-59378483 | None:intergenic | 30.0% | |
| TGATATTTGTAAAGAGGGTT+TGG | - | chr1.2:59382384-59382403 | None:intergenic | 30.0% | |
| TGATGACCAAAGTTACTATA+GGG | + | chr1.2:59382081-59382100 | MS.gene40781:intron | 30.0% | |
| TTCAATATTGTTCTTACACC+AGG | + | chr1.2:59380863-59380882 | MS.gene40781:CDS | 30.0% | |
| ! | AAGGTGATATCAAACAGTTT+TGG | - | chr1.2:59379407-59379426 | None:intergenic | 30.0% |
| ! | AATGCAAACTTGGATTTTGA+TGG | + | chr1.2:59382827-59382846 | MS.gene40781:intron | 30.0% |
| ! | ATTTGTTAGCAAACTAGACT+TGG | + | chr1.2:59382630-59382649 | MS.gene40781:intron | 30.0% |
| ! | CAAGCAATTTGGCATTTTAA+AGG | + | chr1.2:59381289-59381308 | MS.gene40781:CDS | 30.0% |
| ! | TGTATTGGGTGAAAATTTTG+CGG | + | chr1.2:59382655-59382674 | MS.gene40781:intron | 30.0% |
| ! | TTGATGACCAAAGTTACTAT+AGG | + | chr1.2:59382080-59382099 | MS.gene40781:intron | 30.0% |
| ! | TTGCATTGTTGCAAATTTTG+TGG | + | chr1.2:59379529-59379548 | MS.gene40781:CDS | 30.0% |
| !! | AAACTAGACTTGGTTTGTAT+TGG | + | chr1.2:59382640-59382659 | MS.gene40781:intron | 30.0% |
| !! | AACTAGACTTGGTTTGTATT+GGG | + | chr1.2:59382641-59382660 | MS.gene40781:intron | 30.0% |
| !! | AGATAGTGTGTTTTGAATAC+TGG | + | chr1.2:59382567-59382586 | MS.gene40781:intron | 30.0% |
| !! | AGCTTCATTGTTTTTCTAAC+TGG | + | chr1.2:59382678-59382697 | MS.gene40781:intron | 30.0% |
| !! | TAGCCTACTTTTATACTTCT+CGG | + | chr1.2:59380252-59380271 | MS.gene40781:intron | 30.0% |
| !! | TATATATTTGATGGTGGTGT+TGG | + | chr1.2:59382031-59382050 | MS.gene40781:intron | 30.0% |
| !! | TGCTAATGGATTGAAATGAT+AGG | + | chr1.2:59381598-59381617 | MS.gene40781:intron | 30.0% |
| !!! | GGTTGTTTTTTCATAGGTTT+AGG | + | chr1.2:59378796-59378815 | MS.gene40781:intron | 30.0% |
| !!! | TTTGCAATTTTAGAGTATCC+AGG | - | chr1.2:59381635-59381654 | None:intergenic | 30.0% |
| AAAGAAGCTTCCCAAAGAAA+GGG | - | chr1.2:59380945-59380964 | None:intergenic | 35.0% | |
| AAAGATTATGCTGCCAATGA+GGG | + | chr1.2:59380991-59381010 | MS.gene40781:intron | 35.0% | |
| AAAGTGGCTATAATTGTTGG+TGG | + | chr1.2:59379638-59379657 | MS.gene40781:CDS | 35.0% | |
| AACAGAGAACTTACTGTAAC+AGG | - | chr1.2:59380467-59380486 | None:intergenic | 35.0% | |
| AAGATCGTTTGAACGTATCT+AGG | + | chr1.2:59382433-59382452 | MS.gene40781:intron | 35.0% | |
| AATGTTGTCTCTTCTATCAG+TGG | + | chr1.2:59383104-59383123 | MS.gene40781:CDS | 35.0% | |
| ACATATGGAATTGTGGAATG+TGG | + | chr1.2:59379205-59379224 | MS.gene40781:intron | 35.0% | |
| ACATGTCATATGATGTCGTA+GGG | + | chr1.2:59382938-59382957 | MS.gene40781:CDS | 35.0% | |
| ACATTCCACAAGTAAATAGG+GGG | - | chr1.2:59379154-59379173 | None:intergenic | 35.0% | |
| ACTGTCGTATGAAATCTTCA+GGG | - | chr1.2:59380720-59380739 | None:intergenic | 35.0% | |
| AGAAACAAGAAAAGGAGAAG+AGG | - | chr1.2:59381502-59381521 | None:intergenic | 35.0% | |
| AGGCTTAACAAGAAGCTTTA+AGG | - | chr1.2:59381810-59381829 | None:intergenic | 35.0% | |
| ATACTCCTAGGTCATATCTA+GGG | + | chr1.2:59381697-59381716 | MS.gene40781:intron | 35.0% | |
| ATCTGCTTAAAAGTTGCTTC+TGG | + | chr1.2:59380422-59380441 | MS.gene40781:CDS | 35.0% | |
| ATGAAATCTTCAGGGTCTAT+GGG | - | chr1.2:59380712-59380731 | None:intergenic | 35.0% | |
| CAATAAGTGTACAAGGCATA+AGG | - | chr1.2:59379438-59379457 | None:intergenic | 35.0% | |
| CAGGATGAAATTTGGAAAGA+AGG | - | chr1.2:59380400-59380419 | None:intergenic | 35.0% | |
| CCTATGAAAAAACAACCTAC+AGG | - | chr1.2:59378793-59378812 | None:intergenic | 35.0% | |
| CTGAAGTAAGTTAATGAACG+AGG | - | chr1.2:59380502-59380521 | None:intergenic | 35.0% | |
| GAAATGGATGAGATTAAAGG+AGG | - | chr1.2:59378376-59378395 | None:intergenic | 35.0% | |
| GAATATAATTTCGACAGCCT+TGG | + | chr1.2:59381571-59381590 | MS.gene40781:intron | 35.0% | |
| GCAGATTACAGGATGAAATT+TGG | - | chr1.2:59380408-59380427 | None:intergenic | 35.0% | |
| GCTAAACATCCAAAATGAGA+AGG | - | chr1.2:59383084-59383103 | None:intergenic | 35.0% | |
| GCTCTATACATATGGAATTG+TGG | + | chr1.2:59379198-59379217 | MS.gene40781:intron | 35.0% | |
| GGAATTGGATCATGTTAATG+AGG | + | chr1.2:59378627-59378646 | MS.gene40781:CDS | 35.0% | |
| GGTGAAATGGATGAGATTAA+AGG | - | chr1.2:59378379-59378398 | None:intergenic | 35.0% | |
| GTTAATGAGGATAAGAGTGA+AGG | + | chr1.2:59378640-59378659 | MS.gene40781:CDS | 35.0% | |
| TAAAGATTATGCTGCCAATG+AGG | + | chr1.2:59380990-59381009 | MS.gene40781:intron | 35.0% | |
| TAATACCTCTGAGTGATAGA+AGG | - | chr1.2:59378477-59378496 | None:intergenic | 35.0% | |
| TACTGTCGTATGAAATCTTC+AGG | - | chr1.2:59380721-59380740 | None:intergenic | 35.0% | |
| TAGTGACCTAAATGGTGATA+TGG | + | chr1.2:59382536-59382555 | MS.gene40781:intron | 35.0% | |
| TAGTTATATGCAGGAACTCT+CGG | - | chr1.2:59379695-59379714 | None:intergenic | 35.0% | |
| TATGAAATCTTCAGGGTCTA+TGG | - | chr1.2:59380713-59380732 | None:intergenic | 35.0% | |
| TCATCCAAAGCAAATCTCAT+CGG | + | chr1.2:59382988-59383007 | MS.gene40781:CDS | 35.0% | |
| TCGAATTGATCTGTTATCTG+AGG | + | chr1.2:59380128-59380147 | MS.gene40781:CDS | 35.0% | |
| TGATAGGTATAATTGAAGCC+TGG | + | chr1.2:59381614-59381633 | MS.gene40781:intron | 35.0% | |
| TGTCAAGACAGTATCTACAA+AGG | - | chr1.2:59378764-59378783 | None:intergenic | 35.0% | |
| TTAACCAACAAGCTTTCTAC+CGG | + | chr1.2:59380586-59380605 | MS.gene40781:CDS | 35.0% | |
| TTGAAGCTTGAAAGAAGTTC+TGG | - | chr1.2:59382169-59382188 | None:intergenic | 35.0% | |
| ! | AAATATTCTCTTTTCCAGGC+TGG | + | chr1.2:59381394-59381413 | MS.gene40781:intron | 35.0% |
| ! | AATATTCTCTTTTCCAGGCT+GGG | + | chr1.2:59381395-59381414 | MS.gene40781:intron | 35.0% |
| ! | AGGTTTTGCCCTTTGATATT+TGG | + | chr1.2:59381541-59381560 | MS.gene40781:intron | 35.0% |
| ! | AGTGGAATGTGTGCTTTTAT+GGG | + | chr1.2:59381233-59381252 | MS.gene40781:CDS | 35.0% |
| ! | ATGAGATTTGCTTTGGATGA+TGG | - | chr1.2:59382988-59383007 | None:intergenic | 35.0% |
| ! | GCAACTTTTAAGCAGATTAC+AGG | - | chr1.2:59380419-59380438 | None:intergenic | 35.0% |
| ! | TAGTGGAATGTGTGCTTTTA+TGG | + | chr1.2:59381232-59381251 | MS.gene40781:CDS | 35.0% |
| ! | TGAGATTTGCTTTGGATGAT+GGG | - | chr1.2:59382987-59383006 | None:intergenic | 35.0% |
| ! | TGAGCCTTATAAAATCAAGC+AGG | + | chr1.2:59379744-59379763 | MS.gene40781:intron | 35.0% |
| !! | AAGCCTTATTCTCCATCATA+TGG | + | chr1.2:59381824-59381843 | MS.gene40781:intron | 35.0% |
| !! | TATGTAGGTTTTGTCTGAAG+AGG | + | chr1.2:59378869-59378888 | MS.gene40781:intron | 35.0% |
| !! | TCAAGCTTTATTTCTCAGCA+TGG | + | chr1.2:59381435-59381454 | MS.gene40781:CDS | 35.0% |
| !! | TCCATTAATTTGCCAACCAA+GGG | - | chr1.2:59379665-59379684 | None:intergenic | 35.0% |
| !!! | CCTGTAGGTTGTTTTTTCAT+AGG | + | chr1.2:59378790-59378809 | MS.gene40781:intron | 35.0% |
| !!! | GTATTGATTTTAATCGGCAC+AGG | - | chr1.2:59378694-59378713 | None:intergenic | 35.0% |
| AAAACCAGTTGTTAAGGGTC+TGG | + | chr1.2:59380763-59380782 | MS.gene40781:intron | 40.0% | |
| AAAAGTGATCCAAAAGGGGA+GGG | + | chr1.2:59381896-59381915 | MS.gene40781:intron | 40.0% | |
| AAACTACATGTCAAGGGAAC+AGG | - | chr1.2:59380008-59380027 | None:intergenic | 40.0% | |
| AACAATTGAGGAGGGAAACT+TGG | - | chr1.2:59381178-59381197 | None:intergenic | 40.0% | |
| AACCCATGTTCGAATGTCAA+AGG | - | chr1.2:59382208-59382227 | None:intergenic | 40.0% | |
| AAGAAGGAGGAATGGTGAAA+TGG | - | chr1.2:59378392-59378411 | None:intergenic | 40.0% | |
| AAGATTATGCTGCCAATGAG+GGG | + | chr1.2:59380992-59381011 | MS.gene40781:intron | 40.0% | |
| AAGGCATAAGGCACGTAATA+AGG | - | chr1.2:59379426-59379445 | None:intergenic | 40.0% | |
| AATGTAGACACTGAAGTAGG+AGG | - | chr1.2:59379861-59379880 | None:intergenic | 40.0% | |
| ACAAGGAAAGACAAGGTTGT+GGG | + | chr1.2:59381988-59382007 | MS.gene40781:intron | 40.0% | |
| ACCCATGTTCGAATGTCAAA+GGG | - | chr1.2:59382207-59382226 | None:intergenic | 40.0% | |
| ACTATCCTTCTATCACTCAG+AGG | + | chr1.2:59378469-59378488 | MS.gene40781:CDS | 40.0% | |
| AGAACATGAAAACCCCTCAT+TGG | - | chr1.2:59381007-59381026 | None:intergenic | 40.0% | |
| AGATACAGCTGTGATGCATT+TGG | + | chr1.2:59381770-59381789 | MS.gene40781:intron | 40.0% | |
| AGCAATGTAGACACTGAAGT+AGG | - | chr1.2:59379864-59379883 | None:intergenic | 40.0% | |
| AGCACTTCATCTAAGTGACA+GGG | - | chr1.2:59379117-59379136 | None:intergenic | 40.0% | |
| AGTATCCAGGCTTCATTGAT+AGG | + | chr1.2:59382484-59382503 | MS.gene40781:intron | 40.0% | |
| ATACAGCTGTGATGCATTTG+GGG | + | chr1.2:59381772-59381791 | MS.gene40781:intron | 40.0% | |
| CAAAACCCCCTATTTACTTG+TGG | + | chr1.2:59379146-59379165 | MS.gene40781:intron | 40.0% | |
| CAACAGGTTTGTGATGGTTT+AGG | - | chr1.2:59380625-59380644 | None:intergenic | 40.0% | |
| CAAGACAGTATCTACAAAGG+CGG | - | chr1.2:59378761-59378780 | None:intergenic | 40.0% | |
| CAAGAGGCTTGAATGAATCA+AGG | - | chr1.2:59379591-59379610 | None:intergenic | 40.0% | |
| CAATCCATTAGCAACTACCA+AGG | - | chr1.2:59381591-59381610 | None:intergenic | 40.0% | |
| CACATGTCATATGATGTCGT+AGG | + | chr1.2:59382937-59382956 | MS.gene40781:CDS | 40.0% | |
| CATCCAAAGCAAATCTCATC+GGG | + | chr1.2:59382989-59383008 | MS.gene40781:CDS | 40.0% | |
| CATGTCATATGATGTCGTAG+GGG | + | chr1.2:59382939-59382958 | MS.gene40781:CDS | 40.0% | |
| CCTAAATGGTCCCTTTCTTT+GGG | + | chr1.2:59380932-59380951 | MS.gene40781:intron | 40.0% | |
| CTTATTGATGTTTGTGTGGC+TGG | + | chr1.2:59379451-59379470 | MS.gene40781:intron | 40.0% | |
| GAAAAAACAACCTACAGGCA+AGG | - | chr1.2:59378788-59378807 | None:intergenic | 40.0% | |
| GAAACCAATACGACAAACCA+TGG | - | chr1.2:59379894-59379913 | None:intergenic | 40.0% | |
| GAAAGAAGCTTCCCAAAGAA+AGG | - | chr1.2:59380946-59380965 | None:intergenic | 40.0% | |
| GAATTCCTATCAATGAAGCC+TGG | - | chr1.2:59382492-59382511 | None:intergenic | 40.0% | |
| GATACAGCTGTGATGCATTT+GGG | + | chr1.2:59381771-59381790 | MS.gene40781:intron | 40.0% | |
| GATACTCCTAGGTCATATCT+AGG | + | chr1.2:59381696-59381715 | MS.gene40781:intron | 40.0% | |
| GCTGTTGCTGTATATATGAG+TGG | + | chr1.2:59381457-59381476 | MS.gene40781:CDS | 40.0% | |
| GCTTGAATGAATCAAGGCAA+TGG | - | chr1.2:59379585-59379604 | None:intergenic | 40.0% | |
| GGTGGAAAACCAGTTGTTAA+GGG | + | chr1.2:59380758-59380777 | MS.gene40781:intron | 40.0% | |
| GTAAGCCTGTAGAACAATTG+AGG | - | chr1.2:59381190-59381209 | None:intergenic | 40.0% | |
| TAAAAGTGATCCAAAAGGGG+AGG | + | chr1.2:59381895-59381914 | MS.gene40781:intron | 40.0% | |
| TAATTCCTCTCGCCATATGA+TGG | - | chr1.2:59381839-59381858 | None:intergenic | 40.0% | |
| TCCACTAAATCCTCCAATGA+TGG | - | chr1.2:59381219-59381238 | None:intergenic | 40.0% | |
| TCCATCATTGGAGGATTTAG+TGG | + | chr1.2:59381215-59381234 | MS.gene40781:CDS | 40.0% | |
| TCCCTTGGTTGGCAAATTAA+TGG | + | chr1.2:59379661-59379680 | MS.gene40781:CDS | 40.0% | |
| TCCTAAATGGTCCCTTTCTT+TGG | + | chr1.2:59380931-59380950 | MS.gene40781:intron | 40.0% | |
| TGGTGGAAAACCAGTTGTTA+AGG | + | chr1.2:59380757-59380776 | MS.gene40781:intron | 40.0% | |
| TTACATCCATCCATCATTGG+AGG | + | chr1.2:59381206-59381225 | MS.gene40781:CDS | 40.0% | |
| TTATGGGACAAGGAAAGACA+AGG | + | chr1.2:59381981-59382000 | MS.gene40781:intron | 40.0% | |
| TTCATCGAATGATCTGCAAC+AGG | - | chr1.2:59380641-59380660 | None:intergenic | 40.0% | |
| TTGGACTTCTTGAATTGGCT+GGG | + | chr1.2:59382050-59382069 | MS.gene40781:intron | 40.0% | |
| TTGTCTCTTCTATCAGTGGT+TGG | + | chr1.2:59383108-59383127 | MS.gene40781:CDS | 40.0% | |
| ! | AATGTGTGCTTTTATGGGTG+TGG | + | chr1.2:59381238-59381257 | MS.gene40781:CDS | 40.0% |
| ! | ACAGCATTTTTAACGCAGCA+TGG | + | chr1.2:59380896-59380915 | MS.gene40781:CDS | 40.0% |
| ! | ATATTCTCTTTTCCAGGCTG+GGG | + | chr1.2:59381396-59381415 | MS.gene40781:intron | 40.0% |
| ! | CAAATTTTGTGGAGCAGCTT+TGG | + | chr1.2:59379540-59379559 | MS.gene40781:CDS | 40.0% |
| ! | CACAAGTAAATAGGGGGTTT+TGG | - | chr1.2:59379148-59379167 | None:intergenic | 40.0% |
| ! | CTAAATCCTCCAATGATGGA+TGG | - | chr1.2:59381215-59381234 | None:intergenic | 40.0% |
| ! | CTACAGATTTTATCACGGCT+AGG | + | chr1.2:59382913-59382932 | MS.gene40781:intron | 40.0% |
| ! | GCAAACGATCCTTCTCATTT+TGG | + | chr1.2:59383072-59383091 | MS.gene40781:CDS | 40.0% |
| ! | GGACCGAGAAGTATAAAAGT+AGG | - | chr1.2:59380178-59380197 | None:intergenic | 40.0% |
| ! | TATTGAGAAGCTTTGTGGTG+TGG | + | chr1.2:59379923-59379942 | MS.gene40781:CDS | 40.0% |
| ! | TCGCCATATGATGGAGAATA+AGG | - | chr1.2:59381830-59381849 | None:intergenic | 40.0% |
| ! | TGGTGTTGGACTTCTTGAAT+TGG | + | chr1.2:59382045-59382064 | MS.gene40781:intron | 40.0% |
| !! | AAGTTCTGGCTCTACTGAAT+TGG | - | chr1.2:59382155-59382174 | None:intergenic | 40.0% |
| !! | AGTTGCTTCTGGCTTAATGA+TGG | + | chr1.2:59380433-59380452 | MS.gene40781:CDS | 40.0% |
| !! | GTCCATTAATTTGCCAACCA+AGG | - | chr1.2:59379666-59379685 | None:intergenic | 40.0% |
| !! | GTTGCTTCTGGCTTAATGAT+GGG | + | chr1.2:59380434-59380453 | MS.gene40781:CDS | 40.0% |
| !! | TAGGAGTATCGTATGAGTGT+CGG | - | chr1.2:59381686-59381705 | None:intergenic | 40.0% |
| !! | TATAATTGTTGGTGGTCCCT+TGG | + | chr1.2:59379646-59379665 | MS.gene40781:CDS | 40.0% |
| !! | TTGTCGTATTGGTTTCAGCT+GGG | + | chr1.2:59379898-59379917 | MS.gene40781:CDS | 40.0% |
| !! | TTTGTCGTATTGGTTTCAGC+TGG | + | chr1.2:59379897-59379916 | MS.gene40781:CDS | 40.0% |
| !!! | AGGCTTTTTTGTTCGTCTGT+TGG | - | chr1.2:59383168-59383187 | None:intergenic | 40.0% |
| !!! | GGACCGAGGATTAGTTTTTT+AGG | + | chr1.2:59381136-59381155 | MS.gene40781:intron | 40.0% |
| AACATTCGTGTCTTCGACTC+TGG | + | chr1.2:59381265-59381284 | MS.gene40781:CDS | 45.0% | |
| AACTTCAGATGTGCCTAGCT+TGG | + | chr1.2:59379356-59379375 | MS.gene40781:intron | 45.0% | |
| AATGCTGTCATCAAACTGCC+TGG | - | chr1.2:59380884-59380903 | None:intergenic | 45.0% | |
| ACATGTTCTTGCAGCTACTC+CGG | + | chr1.2:59378896-59378915 | MS.gene40781:CDS | 45.0% | |
| AGCCTGTAGAACAATTGAGG+AGG | - | chr1.2:59381187-59381206 | None:intergenic | 45.0% | |
| AGCTGCTGATAGTAACTGAG+TGG | - | chr1.2:59379814-59379833 | None:intergenic | 45.0% | |
| AGGTTTGTGATGGTTTAGGC+CGG | - | chr1.2:59380621-59380640 | None:intergenic | 45.0% | |
| ATCCAAAAGGGGAGGGAATT+TGG | + | chr1.2:59381903-59381922 | MS.gene40781:intron | 45.0% | |
| ATGCAGGAACTCTCGGTAAA+TGG | - | chr1.2:59379688-59379707 | None:intergenic | 45.0% | |
| ATGCGAGAAAGAAGGAGGAA+TGG | - | chr1.2:59378400-59378419 | None:intergenic | 45.0% | |
| ATGCTCCCTAGATATGACCT+AGG | - | chr1.2:59381705-59381724 | None:intergenic | 45.0% | |
| ATTCTCCATCATATGGCGAG+AGG | + | chr1.2:59381831-59381850 | MS.gene40781:intron | 45.0% | |
| CACAGCTGACAGGAGTTAAT+AGG | + | chr1.2:59380070-59380089 | MS.gene40781:intron | 45.0% | |
| CAGCATGGATGTTCTGTAGA+TGG | + | chr1.2:59383133-59383152 | MS.gene40781:CDS | 45.0% | |
| CCCAAAGAAAGGGACCATTT+AGG | - | chr1.2:59380935-59380954 | None:intergenic | 45.0% | |
| CCTCGGTCCCAAATAAAACA+AGG | - | chr1.2:59381125-59381144 | None:intergenic | 45.0% | |
| CGATAGCGTAATCTCGAAGA+AGG | - | chr1.2:59378426-59378445 | None:intergenic | 45.0% | |
| CTATTAACTCCTGTCAGCTG+TGG | - | chr1.2:59380072-59380091 | None:intergenic | 45.0% | |
| GACAACAAGATCACCAAGCT+AGG | - | chr1.2:59379372-59379391 | None:intergenic | 45.0% | |
| GACAAGGAAAGACAAGGTTG+TGG | + | chr1.2:59381987-59382006 | MS.gene40781:intron | 45.0% | |
| GACACTCATACGATACTCCT+AGG | + | chr1.2:59381685-59381704 | MS.gene40781:intron | 45.0% | |
| GAGCACTTCATCTAAGTGAC+AGG | - | chr1.2:59379118-59379137 | None:intergenic | 45.0% | |
| GATCTGCAACAGGTTTGTGA+TGG | - | chr1.2:59380631-59380650 | None:intergenic | 45.0% | |
| GCATCAGATGCTGACAGTAT+AGG | + | chr1.2:59380667-59380686 | MS.gene40781:CDS | 45.0% | |
| GCCCTTTGACATTCGAACAT+GGG | + | chr1.2:59382203-59382222 | MS.gene40781:intron | 45.0% | |
| GCCTGTAGAACAATTGAGGA+GGG | - | chr1.2:59381186-59381205 | None:intergenic | 45.0% | |
| GGCTTACATCCATCCATCAT+TGG | + | chr1.2:59381203-59381222 | MS.gene40781:intron | 45.0% | |
| GGGCGCAAATTATCCAAACT+GGG | + | chr1.2:59382959-59382978 | MS.gene40781:CDS | 45.0% | |
| GGTTTATTTCCACAGCTGAC+AGG | + | chr1.2:59380060-59380079 | MS.gene40781:intron | 45.0% | |
| GTTGGACTTCTTGAATTGGC+TGG | + | chr1.2:59382049-59382068 | MS.gene40781:intron | 45.0% | |
| TCCCTCCTCAATTGTTCTAC+AGG | + | chr1.2:59381182-59381201 | MS.gene40781:intron | 45.0% | |
| TCGACTCTGGTCAAGCAATT+TGG | + | chr1.2:59381278-59381297 | MS.gene40781:CDS | 45.0% | |
| TGAATCAAGGCAATGGCAGA+AGG | - | chr1.2:59379578-59379597 | None:intergenic | 45.0% | |
| TGCCCTTTGACATTCGAACA+TGG | + | chr1.2:59382202-59382221 | MS.gene40781:intron | 45.0% | |
| TTCAGGGTCTATGGGAAGAT+CGG | - | chr1.2:59380704-59380723 | None:intergenic | 45.0% | |
| ! | AACCAAATTCCCTCCCCTTT+TGG | - | chr1.2:59381908-59381927 | None:intergenic | 45.0% |
| ! | AAGCTTTGTGGTGTGGCTTT+GGG | + | chr1.2:59379930-59379949 | MS.gene40781:CDS | 45.0% |
| ! | ACAGCCTTGGTAGTTGCTAA+TGG | + | chr1.2:59381584-59381603 | MS.gene40781:intron | 45.0% |
| ! | AGAAGTTGCTGTTGCAAGTC+TGG | + | chr1.2:59383017-59383036 | MS.gene40781:CDS | 45.0% |
| ! | AGTCCCGATGAGATTTGCTT+TGG | - | chr1.2:59382995-59383014 | None:intergenic | 45.0% |
| ! | GGTGGGTTTCTTCACTAAAG+TGG | + | chr1.2:59379622-59379641 | MS.gene40781:CDS | 45.0% |
| !! | ATAGCTGGAGCATTGCTGTT+TGG | + | chr1.2:59380371-59380390 | MS.gene40781:CDS | 45.0% |
| !! | TGTCGTATTGGTTTCAGCTG+GGG | + | chr1.2:59379899-59379918 | MS.gene40781:CDS | 45.0% |
| !!! | AGCAGCTTTGGACTTTTGCT+TGG | + | chr1.2:59379552-59379571 | MS.gene40781:CDS | 45.0% |
| !!! | CCTTGTTTTATTTGGGACCG+AGG | + | chr1.2:59381122-59381141 | MS.gene40781:intron | 45.0% |
| AACGCCGGTAGAAAGCTTGT+TGG | - | chr1.2:59380593-59380612 | None:intergenic | 50.0% | |
| AAGAAACCCACCACAGCAAC+TGG | - | chr1.2:59379614-59379633 | None:intergenic | 50.0% | |
| ACCCTGCTGGGTTATATGGT+GGG | + | chr1.2:59378922-59378941 | MS.gene40781:intron | 50.0% | |
| ATCCCACCATATAACCCAGC+AGG | - | chr1.2:59378927-59378946 | None:intergenic | 50.0% | |
| CCTTCCTGCTAGTATTGCGT+GGG | + | chr1.2:59380829-59380848 | MS.gene40781:CDS | 50.0% | |
| CTACATTGCTTCTGCGTCCA+TGG | + | chr1.2:59379874-59379893 | MS.gene40781:CDS | 50.0% | |
| CTGGCAGAGTCTCTAATGCT+TGG | + | chr1.2:59383036-59383055 | MS.gene40781:CDS | 50.0% | |
| CTTACGTTGGTGCAGCTTGT+TGG | + | chr1.2:59379271-59379290 | MS.gene40781:intron | 50.0% | |
| GAAGGTCGATGCGAGAAAGA+AGG | - | chr1.2:59378408-59378427 | None:intergenic | 50.0% | |
| GCAATACTAGCAGGAAGGAC+TGG | - | chr1.2:59380827-59380846 | None:intergenic | 50.0% | |
| GCTTCCAGACCCTTAACAAC+TGG | - | chr1.2:59380770-59380789 | None:intergenic | 50.0% | |
| GGGGCGCAAATTATCCAAAC+TGG | + | chr1.2:59382958-59382977 | MS.gene40781:CDS | 50.0% | |
| GGGGCTATTGAGAAGCTTTG+TGG | + | chr1.2:59379918-59379937 | MS.gene40781:CDS | 50.0% | |
| GGTCTGGAAGCTATCAAGCT+CGG | + | chr1.2:59380779-59380798 | MS.gene40781:CDS | 50.0% | |
| GGTTGCAAATGAGCGTGACT+GGG | + | chr1.2:59379953-59379972 | MS.gene40781:CDS | 50.0% | |
| GTCTTGACATCCTTGCCTGT+AGG | + | chr1.2:59378775-59378794 | MS.gene40781:intron | 50.0% | |
| TCCCACCATATAACCCAGCA+GGG | - | chr1.2:59378926-59378945 | None:intergenic | 50.0% | |
| TCCTTCCTGCTAGTATTGCG+TGG | + | chr1.2:59380828-59380847 | MS.gene40781:CDS | 50.0% | |
| TTTCTACCGGCGTTCTTGAC+CGG | + | chr1.2:59380599-59380618 | MS.gene40781:CDS | 50.0% | |
| TTTGCTTGTGCAAGTGCGAC+TGG | - | chr1.2:59380096-59380115 | None:intergenic | 50.0% | |
| ! | AGCTTTGTGGTGTGGCTTTG+GGG | + | chr1.2:59379931-59379950 | MS.gene40781:CDS | 50.0% |
| ! | GAAGCTTTGTGGTGTGGCTT+TGG | + | chr1.2:59379929-59379948 | MS.gene40781:CDS | 50.0% |
| ! | GCGTCCATGGTTTGTCGTAT+TGG | + | chr1.2:59379887-59379906 | MS.gene40781:CDS | 50.0% |
| ! | TATCAGTGGTTGGTGCAGCA+TGG | + | chr1.2:59383118-59383137 | MS.gene40781:CDS | 50.0% |
| !! | ATTGTTGGTGGTCCCTTGGT+TGG | + | chr1.2:59379650-59379669 | MS.gene40781:CDS | 50.0% |
| !! | CTCGGCTGGAAAGAGTATCT+TGG | + | chr1.2:59380797-59380816 | MS.gene40781:CDS | 50.0% |
| !! | TGGATGATGGGATCCCAGTT+TGG | - | chr1.2:59382975-59382994 | None:intergenic | 50.0% |
| AAGCCTCTTGCCAGTTGCTG+TGG | + | chr1.2:59379601-59379620 | MS.gene40781:CDS | 55.0% | |
| AGCACCCACGCAATACTAGC+AGG | - | chr1.2:59380836-59380855 | None:intergenic | 55.0% | |
| CACCCTGCTGGGTTATATGG+TGG | + | chr1.2:59378921-59378940 | MS.gene40781:intron | 55.0% | |
| CCCACGCAATACTAGCAGGA+AGG | - | chr1.2:59380832-59380851 | None:intergenic | 55.0% | |
| CGCGCTGCGTATAAGTATCC+AGG | + | chr1.2:59382471-59382490 | MS.gene40781:intron | 55.0% | |
| CTCTTGCCAGTTGCTGTGGT+GGG | + | chr1.2:59379605-59379624 | MS.gene40781:CDS | 55.0% | |
| GCACACCCTGCTGGGTTATA+TGG | + | chr1.2:59378918-59378937 | MS.gene40781:CDS | 55.0% | |
| GCAGCGCGTATGATGCAATG+TGG | - | chr1.2:59382459-59382478 | None:intergenic | 55.0% | |
| GGGGAGGGAATTTGGTTGTG+TGG | + | chr1.2:59381911-59381930 | MS.gene40781:intron | 55.0% | |
| GGGTTGCAAATGAGCGTGAC+TGG | + | chr1.2:59379952-59379971 | MS.gene40781:CDS | 55.0% | |
| GGTCGATGCGAGAAAGAAGG+AGG | - | chr1.2:59378405-59378424 | None:intergenic | 55.0% | |
| TATAACCCAGCAGGGTGTGC+CGG | - | chr1.2:59378918-59378937 | None:intergenic | 55.0% | |
| TGGAAGCTATCAAGCTCGGC+TGG | + | chr1.2:59380783-59380802 | MS.gene40781:CDS | 55.0% | |
| TTTAGGCCGGTCAAGAACGC+CGG | - | chr1.2:59380608-59380627 | None:intergenic | 55.0% | |
| ! | TTTTCCAGGCTGGGGCAGTT+GGG | + | chr1.2:59381404-59381423 | MS.gene40781:intron | 55.0% |
| !! | GCTTTGTGGTGTGGCTTTGG+GGG | + | chr1.2:59379932-59379951 | MS.gene40781:CDS | 55.0% |
| CCACCACAGCAACTGGCAAG+AGG | - | chr1.2:59379607-59379626 | None:intergenic | 60.0% | |
| CCTCTTGCCAGTTGCTGTGG+TGG | + | chr1.2:59379604-59379623 | MS.gene40781:CDS | 60.0% | |
| TGAGCGTGACTGGGTTGTGC+TGG | + | chr1.2:59379962-59379981 | MS.gene40781:CDS | 60.0% | |
| ! | CTTTTCCAGGCTGGGGCAGT+TGG | + | chr1.2:59381403-59381422 | MS.gene40781:intron | 60.0% |
| CTACTCCGGCACACCCTGCT+GGG | + | chr1.2:59378910-59378929 | MS.gene40781:CDS | 65.0% | |
| CCAACCCAACTGCCCCAGCC+TGG | - | chr1.2:59381411-59381430 | None:intergenic | 70.0% | |
| CCAGGCTGGGGCAGTTGGGT+TGG | + | chr1.2:59381408-59381427 | MS.gene40781:intron | 70.0% | |
| GCTACTCCGGCACACCCTGC+TGG | + | chr1.2:59378909-59378928 | MS.gene40781:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 59378357 | 59383212 | 59378357 | ID=MS.gene40781 |
| chr1.2 | mRNA | 59378357 | 59383212 | 59378357 | ID=MS.gene40781.t1;Parent=MS.gene40781 |
| chr1.2 | exon | 59378357 | 59378490 | 59378357 | ID=MS.gene40781.t1.exon1;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59378357 | 59378490 | 59378357 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59378576 | 59378792 | 59378576 | ID=MS.gene40781.t1.exon2;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59378576 | 59378792 | 59378576 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59378876 | 59378939 | 59378876 | ID=MS.gene40781.t1.exon3;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59378876 | 59378939 | 59378876 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59379516 | 59379730 | 59379516 | ID=MS.gene40781.t1.exon4;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59379516 | 59379730 | 59379516 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59379807 | 59379983 | 59379807 | ID=MS.gene40781.t1.exon5;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59379807 | 59379983 | 59379807 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59380075 | 59380149 | 59380075 | ID=MS.gene40781.t1.exon6;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59380075 | 59380149 | 59380075 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59380371 | 59380472 | 59380371 | ID=MS.gene40781.t1.exon7;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59380371 | 59380472 | 59380371 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59380571 | 59380688 | 59380571 | ID=MS.gene40781.t1.exon8;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59380571 | 59380688 | 59380571 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59380771 | 59380917 | 59380771 | ID=MS.gene40781.t1.exon9;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59380771 | 59380917 | 59380771 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59381204 | 59381310 | 59381204 | ID=MS.gene40781.t1.exon10;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59381204 | 59381310 | 59381204 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59381412 | 59381525 | 59381412 | ID=MS.gene40781.t1.exon11;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59381412 | 59381525 | 59381412 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| chr1.2 | exon | 59382919 | 59383212 | 59382919 | ID=MS.gene40781.t1.exon12;Parent=MS.gene40781.t1 |
| chr1.2 | CDS | 59382919 | 59383212 | 59382919 | ID=cds.MS.gene40781.t1;Parent=MS.gene40781.t1 |
| Gene Sequence |
| Protein sequence |
