Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83179.t1 | XP_003607450.1 | 88.4 | 464 | 5 | 1 | 1 | 415 | 1 | 464 | 3.60E-218 | 767.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83179.t1 | Q55480 | 32.3 | 322 | 202 | 6 | 69 | 387 | 10 | 318 | 1.7e-30 | 135.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83179.t1 | G7JSU0 | 88.4 | 464 | 5 | 1 | 1 | 415 | 1 | 464 | 2.6e-218 | 767.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene83179 | 0.826583 | 2.51E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene83179 | 0.831497 | 1.61E-55 | -1.69E-46 |
| MS.gene049356 | MS.gene83179 | 0.802896 | 4.51E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene83179 | 0.824611 | 7.35E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene83179 | 0.852974 | 3.25E-61 | -1.69E-46 |
| MS.gene049609 | MS.gene83179 | 0.809433 | 1.90E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene83179 | 0.863345 | 2.66E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene83179 | 0.806284 | 8.86E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene83179 | 0.807723 | 4.40E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene83179 | 0.816262 | 6.05E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene83179 | 0.824978 | 6.02E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene83179 | 0.857636 | 1.43E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene83179 | 0.821184 | 4.62E-53 | -1.69E-46 |
| MS.gene050812 | MS.gene83179 | 0.880976 | 3.52E-70 | -1.69E-46 |
| MS.gene050950 | MS.gene83179 | 0.859804 | 3.21E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene83179 | 0.837105 | 6.32E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene83179 | 0.847742 | 9.54E-60 | -1.69E-46 |
| MS.gene051617 | MS.gene83179 | 0.807055 | 6.09E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene83179 | 0.839506 | 1.52E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene83179 | 0.837219 | 5.91E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene83179 | 0.853005 | 3.18E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene83179 | 0.809775 | 1.60E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene83179 | 0.801114 | 1.05E-48 | -1.69E-46 |
| MS.gene052421 | MS.gene83179 | 0.850299 | 1.86E-60 | -1.69E-46 |
| MS.gene052484 | MS.gene83179 | 0.801889 | 7.28E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene83179 | 0.803486 | 3.41E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene83179 | 0.804952 | 1.69E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene83179 | 0.84093 | 6.46E-58 | -1.69E-46 |
| MS.gene053103 | MS.gene83179 | 0.814553 | 1.45E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene83179 | 0.818118 | 2.32E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene83179 | 0.814831 | 1.26E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene83179 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene83179 | 0.830284 | 3.20E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene83179 | 0.805755 | 1.15E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene83179 | 0.807836 | 4.16E-50 | -1.69E-46 |
| MS.gene053579 | MS.gene83179 | 0.862563 | 4.64E-64 | -1.69E-46 |
| MS.gene054123 | MS.gene83179 | 0.861795 | 7.98E-64 | -1.69E-46 |
| MS.gene054408 | MS.gene83179 | 0.847325 | 1.24E-59 | -1.69E-46 |
| MS.gene054955 | MS.gene83179 | 0.816568 | 5.17E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene83179 | 0.848414 | 6.22E-60 | -1.69E-46 |
| MS.gene055224 | MS.gene83179 | 0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene83179 | 0.819147 | 1.35E-52 | -1.69E-46 |
| MS.gene055412 | MS.gene83179 | 0.845819 | 3.20E-59 | -1.69E-46 |
| MS.gene055539 | MS.gene83179 | 0.824041 | 1.00E-53 | -1.69E-46 |
| MS.gene055605 | MS.gene83179 | 0.815055 | 1.12E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene83179 | 0.801625 | 8.24E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene83179 | 0.80151 | 8.70E-49 | -1.69E-46 |
| MS.gene055896 | MS.gene83179 | 0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene83179 | 0.802669 | 5.03E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene83179 | 0.801921 | 7.17E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene83179 | 0.81085 | 9.39E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene83179 | 0.83224 | 1.06E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene83179 | 0.809715 | 1.65E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene83179 | 0.841567 | 4.40E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene83179 | 0.845303 | 4.42E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene83179 | 0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene83179 | 0.823968 | 1.04E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene83179 | 0.809234 | 2.09E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene83179 | 0.815232 | 1.03E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene83179 | 0.823089 | 1.67E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene83179 | 0.815941 | 7.14E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene83179 | 0.852426 | 4.65E-61 | -1.69E-46 |
| MS.gene058120 | MS.gene83179 | 0.801389 | 9.22E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene83179 | 0.815055 | 1.12E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene83179 | 0.801265 | 9.77E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene83179 | 0.835953 | 1.24E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene83179 | 0.801003 | 1.11E-48 | -1.69E-46 |
| MS.gene058444 | MS.gene83179 | 0.801545 | 8.56E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene83179 | 0.836361 | 9.79E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene83179 | 0.825214 | 5.30E-54 | -1.69E-46 |
| MS.gene058838 | MS.gene83179 | 0.810457 | 1.14E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene83179 | 0.832424 | 9.53E-56 | -1.69E-46 |
| MS.gene058948 | MS.gene83179 | 0.811088 | 8.34E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene83179 | 0.829007 | 6.55E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene83179 | 0.852959 | 3.28E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene83179 | 0.803201 | 3.90E-49 | -1.69E-46 |
| MS.gene05959 | MS.gene83179 | 0.821943 | 3.09E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene83179 | 0.839477 | 1.55E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene83179 | 0.842288 | 2.83E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene83179 | 0.830777 | 2.43E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene83179 | 0.837507 | 4.99E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene83179 | 0.874682 | 5.58E-68 | -1.69E-46 |
| MS.gene060193 | MS.gene83179 | 0.800055 | 1.72E-48 | -1.69E-46 |
| MS.gene060407 | MS.gene83179 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene83179 | 0.830897 | 2.27E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene83179 | 0.80954 | 1.80E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene83179 | 0.81731 | 3.52E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene83179 | 0.814341 | 1.62E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene83179 | 0.865095 | 7.57E-65 | -1.69E-46 |
| MS.gene061051 | MS.gene83179 | -0.81682 | 4.54E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene83179 | 0.808187 | 3.50E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene83179 | 0.841472 | 4.65E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83179.t1 | MTR_4g078150 | 88.362 | 464 | 5 | 1 | 1 | 415 | 1 | 464 | 0.0 | 811 |
| MS.gene83179.t1 | MTR_4g078150 | 100.000 | 341 | 0 | 0 | 75 | 415 | 11 | 351 | 0.0 | 690 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83179.t1 | AT4G27600 | 77.746 | 346 | 77 | 0 | 69 | 414 | 126 | 471 | 0.0 | 568 |
| MS.gene83179.t1 | AT1G19600 | 23.746 | 299 | 209 | 6 | 72 | 363 | 22 | 308 | 4.00e-12 | 67.8 |
Find 93 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGACATTATGATCATTTC+TGG | 0.149192 | 4.2:-31857482 | MS.gene83179:intron |
| TGAGGAGTTCCTGAAGAATT+TGG | 0.171687 | 4.2:-31859104 | MS.gene83179:CDS |
| TATAAGAACATAAGAGAAAA+TGG | 0.199422 | 4.2:+31859977 | None:intergenic |
| AAATGGGCAGTGCGGGAATT+TGG | 0.294279 | 4.2:+31859994 | None:intergenic |
| GGCTCTTACATAGGCGTAAA+AGG | 0.296593 | 4.2:-31856448 | MS.gene83179:CDS |
| GTTATTGCTTTAATAGTATC+AGG | 0.310002 | 4.2:+31857576 | None:intergenic |
| TTTCCAATCCCAAATTCTTC+AGG | 0.318758 | 4.2:+31859095 | None:intergenic |
| CCAGTTGTTGCATCCTTGAT+AGG | 0.321106 | 4.2:+31858582 | None:intergenic |
| AATTTCAGATGCAGTCAAAT+TGG | 0.322488 | 4.2:-31856245 | MS.gene83179:CDS |
| GAGGAGTTCCTGAAGAATTT+GGG | 0.335077 | 4.2:-31859103 | MS.gene83179:CDS |
| TTCTAATACTTTAGTTGCCT+TGG | 0.350723 | 4.2:-31858978 | MS.gene83179:CDS |
| GAAGAATTTGGGATTGGAAA+AGG | 0.352985 | 4.2:-31859092 | MS.gene83179:CDS |
| CAGTGTGGCGAGCGATCTAT+TGG | 0.383914 | 4.2:-31858900 | MS.gene83179:CDS |
| CCCTCCTTCTCCATGTGTTC+CGG | 0.393076 | 4.2:-31856410 | MS.gene83179:CDS |
| ATCTATTGGGTGGCTTCTAC+AGG | 0.397421 | 4.2:-31858886 | MS.gene83179:intron |
| AGCAATAACAAAAGCTTGTA+AGG | 0.402404 | 4.2:-31857562 | MS.gene83179:CDS |
| TTAGTTGCCTTGGCAAGGCT+TGG | 0.404584 | 4.2:-31858968 | MS.gene83179:CDS |
| AGCTAGGAGTAACGGTGCTT+TGG | 0.411129 | 4.2:-31857538 | MS.gene83179:CDS |
| AACTTGATACATCCGTTGTT+AGG | 0.411138 | 4.2:-31856204 | MS.gene83179:CDS |
| ATTTCTTTCTGCACCTATCA+AGG | 0.411704 | 4.2:-31858595 | MS.gene83179:CDS |
| AGCCACTGTTGTTGCACAGC+AGG | 0.416821 | 4.2:-31856281 | MS.gene83179:CDS |
| CCTATCAAGGATGCAACAAC+TGG | 0.418229 | 4.2:-31858582 | MS.gene83179:CDS |
| TAATTAAACAGTACCGATAT+CGG | 0.419189 | 4.2:+31856180 | None:intergenic |
| AGCATTGTGCGTTGAGCATC+TGG | 0.419386 | 4.2:+31858537 | None:intergenic |
| CCATTCAACAGGGAAATTGT+AGG | 0.424167 | 4.2:-31856610 | MS.gene83179:intron |
| TGTCAACTTCGACACTTCCT+TGG | 0.432059 | 4.2:-31857655 | MS.gene83179:CDS |
| GTGTCGGATTTAAGAAATAT+AGG | 0.450420 | 4.2:-31856325 | MS.gene83179:CDS |
| GTTCCTGAAGAATTTGGGAT+TGG | 0.452424 | 4.2:-31859098 | MS.gene83179:CDS |
| CAAAAGCTTGTAAGGAAGCT+AGG | 0.453074 | 4.2:-31857554 | MS.gene83179:CDS |
| CGGGAATTTGGTAATTGAGA+TGG | 0.455946 | 4.2:+31860006 | None:intergenic |
| ACCAACATACTTGTTGTTGA+AGG | 0.456941 | 4.2:-31857615 | MS.gene83179:CDS |
| AAGAATTTGGGATTGGAAAA+GGG | 0.459384 | 4.2:-31859091 | MS.gene83179:CDS |
| TGCAGCTATAAAGCCGCGGC+TGG | 0.464008 | 4.2:-31859010 | MS.gene83179:CDS |
| AAGTTGAAATTCAAAAGATT+CGG | 0.464216 | 4.2:+31856222 | None:intergenic |
| TTTGAAGACACCACGCTGAA+TGG | 0.471784 | 4.2:+31859927 | None:intergenic |
| GGGAATTTGGTAATTGAGAT+GGG | 0.475820 | 4.2:+31860007 | None:intergenic |
| GCTGGTGATGCATATGCATC+TGG | 0.479499 | 4.2:-31856373 | MS.gene83179:CDS |
| CCGGTAGACACTTGTGGTGC+TGG | 0.480771 | 4.2:-31856391 | MS.gene83179:CDS |
| TCCGTTGTTAGGTCCGATAT+CGG | 0.481454 | 4.2:-31856193 | MS.gene83179:CDS |
| ACGCACAATGCTTGCATACC+AGG | 0.486607 | 4.2:-31858526 | MS.gene83179:intron |
| GTTGCCTTGGCAAGGCTTGG+AGG | 0.487942 | 4.2:-31858965 | MS.gene83179:CDS |
| GCTATAAATGTGGCAATGGC+TGG | 0.495219 | 4.2:-31858923 | MS.gene83179:CDS |
| TAAGAGAAAATGGGCAGTGC+GGG | 0.495550 | 4.2:+31859987 | None:intergenic |
| TTTAGGGCTTGGACAAGCTA+TGG | 0.496529 | 4.2:-31859719 | MS.gene83179:intron |
| ATAAGAACATAAGAGAAAAT+GGG | 0.500877 | 4.2:+31859978 | None:intergenic |
| TTTATAGCTGCAACCATCCA+TGG | 0.506445 | 4.2:+31859021 | None:intergenic |
| ATCATAATGTCTCTCAATGC+AGG | 0.507542 | 4.2:+31857491 | None:intergenic |
| GCCATTGCCACATTTATAGC+AGG | 0.508000 | 4.2:+31858926 | None:intergenic |
| TTCAGCACCTCCTCCAAGGT+TGG | 0.511406 | 4.2:+31859891 | None:intergenic |
| GCCTCGGAGACCATCGGTAA+CGG | 0.521634 | 4.2:+31856468 | None:intergenic |
| CAAATTCAGCACCTCCTCCA+AGG | 0.524531 | 4.2:+31859887 | None:intergenic |
| GGTCTCCGAGGCTCTTACAT+AGG | 0.529019 | 4.2:-31856457 | MS.gene83179:CDS |
| TGGGATTGGAAAAGGGAACA+AGG | 0.529868 | 4.2:-31859084 | MS.gene83179:CDS |
| TATGCATCTGGCATATTGTA+TGG | 0.530322 | 4.2:-31856361 | MS.gene83179:CDS |
| AAAGCACTGTTTCTGTTACA+AGG | 0.531055 | 4.2:-31856519 | MS.gene83179:CDS |
| TATAGGTACAATAGCAGCTA+AGG | 0.531215 | 4.2:-31856308 | MS.gene83179:CDS |
| ATACTTTAGTTGCCTTGGCA+AGG | 0.531967 | 4.2:-31858973 | MS.gene83179:CDS |
| TATAAACGCAGACGCGTGTA+CGG | 0.540717 | 4.2:-31859958 | MS.gene83179:CDS |
| TCCTGCTATAAATGTGGCAA+TGG | 0.541036 | 4.2:-31858927 | MS.gene83179:CDS |
| AGTGTGGCGAGCGATCTATT+GGG | 0.541135 | 4.2:-31858899 | MS.gene83179:CDS |
| CTTGTAAATCATGAGGAAAG+AGG | 0.549271 | 4.2:-31859058 | MS.gene83179:CDS |
| AGCTATAAAGCCGCGGCTGG+TGG | 0.554611 | 4.2:-31859007 | MS.gene83179:CDS |
| CTTAGAAACTGCACTTGCCA+AGG | 0.558762 | 4.2:+31857638 | None:intergenic |
| CAAGTGTCTACCGGAACACA+TGG | 0.562852 | 4.2:+31856400 | None:intergenic |
| CTTCTCTGGCACAGTTGATG+AGG | 0.569230 | 4.2:-31859122 | MS.gene83179:CDS |
| GCGACCTCCAAGCCTTGCCA+AGG | 0.575335 | 4.2:+31858961 | None:intergenic |
| TTGTTGCACAGCAGGGAACA+AGG | 0.580537 | 4.2:-31856273 | MS.gene83179:CDS |
| TTACGCCTATGTAAGAGCCT+CGG | 0.581757 | 4.2:+31856452 | None:intergenic |
| GCCACTGTTGTTGCACAGCA+GGG | 0.593186 | 4.2:-31856280 | MS.gene83179:CDS |
| ACCTTCAACAACAAGTATGT+TGG | 0.598982 | 4.2:+31857614 | None:intergenic |
| ACCGGAACACATGGAGAAGG+AGG | 0.600561 | 4.2:+31856409 | None:intergenic |
| CCAGCACCACAAGTGTCTAC+CGG | 0.605293 | 4.2:+31856391 | None:intergenic |
| GTAAGAGCCTCGGAGACCAT+CGG | 0.605674 | 4.2:+31856462 | None:intergenic |
| AATTGAGATGGGAAAGAGTG+TGG | 0.615565 | 4.2:+31860018 | None:intergenic |
| AGAAAGAGATCCACCAGCCG+CGG | 0.617726 | 4.2:+31858997 | None:intergenic |
| AGAGTGTGGAAATGAATGAG+AGG | 0.624919 | 4.2:+31860032 | None:intergenic |
| AAGGAAACTTGTAAATCATG+AGG | 0.626570 | 4.2:-31859065 | MS.gene83179:CDS |
| TCGAGATCCTGCTATAAATG+TGG | 0.626575 | 4.2:-31858933 | MS.gene83179:CDS |
| TGTAAGGAAGCTAGGAGTAA+CGG | 0.626889 | 4.2:-31857546 | MS.gene83179:CDS |
| CCTCTAGTATCCGTTACCGA+TGG | 0.630285 | 4.2:-31856478 | MS.gene83179:CDS |
| ACCGATATCGGACCTAACAA+CGG | 0.634403 | 4.2:+31856192 | None:intergenic |
| TCCGTTACCGATGGTCTCCG+AGG | 0.636605 | 4.2:-31856469 | MS.gene83179:CDS |
| TCCCTGCTGTGCAACAACAG+TGG | 0.645669 | 4.2:+31856279 | None:intergenic |
| CATCGGTAACGGATACTAGA+GGG | 0.659674 | 4.2:+31856479 | None:intergenic |
| CCATCGGTAACGGATACTAG+AGG | 0.659811 | 4.2:+31856478 | None:intergenic |
| TCTACCGGAACACATGGAGA+AGG | 0.666277 | 4.2:+31856406 | None:intergenic |
| GTGGCGAGCGATCTATTGGG+TGG | 0.668623 | 4.2:-31858896 | MS.gene83179:CDS |
| CCGGAACACATGGAGAAGGA+GGG | 0.669249 | 4.2:+31856410 | None:intergenic |
| ATAAGAGAAAATGGGCAGTG+CGG | 0.690018 | 4.2:+31859986 | None:intergenic |
| TGGTTGCAGCTATAAAGCCG+CGG | 0.697252 | 4.2:-31859014 | MS.gene83179:CDS |
| TGTGGCAATGGCTGGCAGTG+TGG | 0.708642 | 4.2:-31858915 | MS.gene83179:CDS |
| GGTTCATCTTCCATTCAGCG+TGG | 0.721716 | 4.2:-31859937 | MS.gene83179:CDS |
| TGTGTTCCGGTAGACACTTG+TGG | 0.728781 | 4.2:-31856397 | MS.gene83179:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATAATAAAAGTTATAAA+TGG | + | chr4.2:31856833-31856852 | None:intergenic | 10.0% |
| !!! | AATTTTTATTTCATTATGAA+TGG | - | chr4.2:31858006-31858025 | MS.gene83179:intron | 10.0% |
| !! | AATAATCAATAACAATATTG+TGG | + | chr4.2:31858261-31858280 | None:intergenic | 15.0% |
| !! | AATTGTATTTACCTTTATTA+TGG | - | chr4.2:31858459-31858478 | MS.gene83179:intron | 15.0% |
| !! | ATAATCAATAACAATATTGT+GGG | + | chr4.2:31858260-31858279 | None:intergenic | 15.0% |
| !! | TAAGCTATTTATATAACAAA+AGG | + | chr4.2:31856718-31856737 | None:intergenic | 15.0% |
| !!! | TAAATTTTAGGGAAAAATTA+CGG | - | chr4.2:31857614-31857633 | MS.gene83179:CDS | 15.0% |
| !! | AAGTTGAAATTCAAAAGATT+CGG | + | chr4.2:31860027-31860046 | None:intergenic | 20.0% |
| !! | AGCAAATAAACAATAATTGA+AGG | + | chr4.2:31856980-31856999 | None:intergenic | 20.0% |
| !! | ATAAGAACATAAGAGAAAAT+GGG | + | chr4.2:31856271-31856290 | None:intergenic | 20.0% |
| !! | ATATTGAATCAATCAACAAT+AGG | - | chr4.2:31857934-31857953 | MS.gene83179:intron | 20.0% |
| !! | GCAAATAAACAATAATTGAA+GGG | + | chr4.2:31856979-31856998 | None:intergenic | 20.0% |
| !! | TATAAGAACATAAGAGAAAA+TGG | + | chr4.2:31856272-31856291 | None:intergenic | 20.0% |
| !! | TCAATTATTGTTTATTTGCT+GGG | - | chr4.2:31856980-31856999 | MS.gene83179:intron | 20.0% |
| !! | TCATTATATGAACTAATGAA+GGG | - | chr4.2:31858522-31858541 | MS.gene83179:intron | 20.0% |
| !! | TTCAATTATTGTTTATTTGC+TGG | - | chr4.2:31856979-31856998 | MS.gene83179:intron | 20.0% |
| !! | TTCATTATTATTAGAGAACA+AGG | + | chr4.2:31858909-31858928 | None:intergenic | 20.0% |
| !! | TTGTTGCAAGTTAAATTATT+TGG | + | chr4.2:31859353-31859372 | None:intergenic | 20.0% |
| !!! | AATGAATAGTGAATTTGTTA+GGG | - | chr4.2:31858923-31858942 | MS.gene83179:CDS | 20.0% |
| !!! | AATGCTTTATCTTTAATTTC+TGG | + | chr4.2:31859396-31859415 | None:intergenic | 20.0% |
| !!! | ATCTGTGTTTTATAAAATGT+GGG | - | chr4.2:31859075-31859094 | MS.gene83179:CDS | 20.0% |
| !!! | CTTTTGTTTTTTCAATTTTG+CGG | - | chr4.2:31858499-31858518 | MS.gene83179:intron | 20.0% |
| !!! | TAATGAATAGTGAATTTGTT+AGG | - | chr4.2:31858922-31858941 | MS.gene83179:CDS | 20.0% |
| ! | AAAGTAAGTTTAATGTTTCC+AGG | + | chr4.2:31858223-31858242 | None:intergenic | 25.0% |
| ! | AATGTAAAGTATATTGAACC+TGG | + | chr4.2:31857741-31857760 | None:intergenic | 25.0% |
| ! | AATTGTATAGAAATGAGAGA+AGG | + | chr4.2:31857487-31857506 | None:intergenic | 25.0% |
| ! | ACAGATGAATACCAAAATTA+GGG | + | chr4.2:31859061-31859080 | None:intergenic | 25.0% |
| ! | ACTAATGCACTTATATGATA+AGG | - | chr4.2:31856739-31856758 | MS.gene83179:intron | 25.0% |
| ! | ATATAAGGAAGAAGCTAATT+TGG | - | chr4.2:31857454-31857473 | MS.gene83179:intron | 25.0% |
| ! | CATAGATTTAGCCATAATAA+AGG | + | chr4.2:31858473-31858492 | None:intergenic | 25.0% |
| ! | CTTTATTATGGCTAAATCTA+TGG | - | chr4.2:31858471-31858490 | MS.gene83179:intron | 25.0% |
| ! | GTCATTATATGAACTAATGA+AGG | - | chr4.2:31858521-31858540 | MS.gene83179:intron | 25.0% |
| ! | GTTATTGCTTTAATAGTATC+AGG | + | chr4.2:31858673-31858692 | None:intergenic | 25.0% |
| ! | TACATCATACATCATACAAT+TGG | - | chr4.2:31857049-31857068 | MS.gene83179:intron | 25.0% |
| ! | TCTTACAAGTTACAAGTAAA+GGG | + | chr4.2:31856897-31856916 | None:intergenic | 25.0% |
| ! | TGGAACTTAAATGTTAAAGA+AGG | + | chr4.2:31858049-31858068 | None:intergenic | 25.0% |
| ! | TTCTTACAAGTTACAAGTAA+AGG | + | chr4.2:31856898-31856917 | None:intergenic | 25.0% |
| ! | TTGAAAGTGAATAACAGTAA+AGG | + | chr4.2:31859228-31859247 | None:intergenic | 25.0% |
| !! | AAATTGTCGTATATTTTCTG+CGG | - | chr4.2:31858985-31859004 | MS.gene83179:CDS | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr4.2:31856767-31856786 | MS.gene83179:intron | 25.0% |
| !! | CATCTGTGTTTTATAAAATG+TGG | - | chr4.2:31859074-31859093 | MS.gene83179:CDS | 25.0% |
| !! | TAACATTTAAGTTCCATCAA+TGG | - | chr4.2:31858053-31858072 | MS.gene83179:intron | 25.0% |
| !! | TAATAATGTTGACTGTTTGA+AGG | + | chr4.2:31856952-31856971 | None:intergenic | 25.0% |
| !! | TAGGTTCTGATCTTAATTAA+TGG | + | chr4.2:31859505-31859524 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr4.2:31856768-31856787 | MS.gene83179:intron | 25.0% |
| !! | TTCTTGAGAAGATATTTCTA+AGG | - | chr4.2:31857793-31857812 | MS.gene83179:intron | 25.0% |
| !!! | ATATTGTATGGTGTTTTAAG+AGG | - | chr4.2:31859897-31859916 | MS.gene83179:CDS | 25.0% |
| !!! | ATGCTATTTCAGGAAATTTT+AGG | - | chr4.2:31858425-31858444 | MS.gene83179:intron | 25.0% |
| !!! | TAATTTAACTTGCAACAACT+CGG | - | chr4.2:31859355-31859374 | MS.gene83179:intron | 25.0% |
| !!! | TCTATGTAATTTTGATGCAA+AGG | - | chr4.2:31859704-31859723 | MS.gene83179:intron | 25.0% |
| !!! | TTTTGTTTTTCCTGAAAGAT+GGG | - | chr4.2:31856500-31856519 | MS.gene83179:CDS | 25.0% |
| AAAAGAATGCTTCTCACTTA+TGG | + | chr4.2:31857554-31857573 | None:intergenic | 30.0% | |
| AAACTTACTTTCGATGCATT+GGG | - | chr4.2:31858232-31858251 | MS.gene83179:intron | 30.0% | |
| AAGATCAGAACCTAATCTTA+CGG | - | chr4.2:31859511-31859530 | MS.gene83179:intron | 30.0% | |
| AAGGAAACTTGTAAATCATG+AGG | - | chr4.2:31857181-31857200 | MS.gene83179:intron | 30.0% | |
| AATACCAAAATTAGGGGATA+TGG | + | chr4.2:31859054-31859073 | None:intergenic | 30.0% | |
| AATTTCAGATGCAGTCAAAT+TGG | - | chr4.2:31860001-31860020 | MS.gene83179:CDS | 30.0% | |
| AGAGACATTATGATCATTTC+TGG | - | chr4.2:31858764-31858783 | MS.gene83179:intron | 30.0% | |
| AGCAATAACAAAAGCTTGTA+AGG | - | chr4.2:31858684-31858703 | MS.gene83179:intron | 30.0% | |
| ATAGTATCACACCACATTTA+CGG | + | chr4.2:31859121-31859140 | None:intergenic | 30.0% | |
| CACAGATGAATACCAAAATT+AGG | + | chr4.2:31859062-31859081 | None:intergenic | 30.0% | |
| CAGATGAATACCAAAATTAG+GGG | + | chr4.2:31859060-31859079 | None:intergenic | 30.0% | |
| CATTTCTCATTTAATGTGCT+TGG | - | chr4.2:31856563-31856582 | MS.gene83179:CDS | 30.0% | |
| GTACGATTTACAAGAATACA+CGG | - | chr4.2:31859440-31859459 | MS.gene83179:intron | 30.0% | |
| GTGTCGGATTTAAGAAATAT+AGG | - | chr4.2:31859921-31859940 | MS.gene83179:CDS | 30.0% | |
| GTTCTCTGATCAAATTGTTA+TGG | - | chr4.2:31857403-31857422 | MS.gene83179:intron | 30.0% | |
| TAAACTTACTTTCGATGCAT+TGG | - | chr4.2:31858231-31858250 | MS.gene83179:intron | 30.0% | |
| TACGATTTACAAGAATACAC+GGG | - | chr4.2:31859441-31859460 | MS.gene83179:intron | 30.0% | |
| TTCTAATACTTTAGTTGCCT+TGG | - | chr4.2:31857268-31857287 | MS.gene83179:intron | 30.0% | |
| TTGTATTTGTCCATTCAACA+GGG | - | chr4.2:31859626-31859645 | MS.gene83179:intron | 30.0% | |
| TTTGTTAGGGTAAAGTGTAA+TGG | - | chr4.2:31858936-31858955 | MS.gene83179:CDS | 30.0% | |
| ! | AAGAATTTGGGATTGGAAAA+GGG | - | chr4.2:31857155-31857174 | MS.gene83179:intron | 30.0% |
| ! | GTTTAAGATAAACGATATGC+AGG | - | chr4.2:31859568-31859587 | MS.gene83179:intron | 30.0% |
| ! | TTTGGTTGGATTTTGCAATA+TGG | - | chr4.2:31857571-31857590 | MS.gene83179:CDS | 30.0% |
| !! | ATTCACTTGTATGCTATTTC+AGG | - | chr4.2:31858415-31858434 | MS.gene83179:intron | 30.0% |
| !! | GCAATGATTTTGACATAAAG+TGG | + | chr4.2:31858839-31858858 | None:intergenic | 30.0% |
| !! | GTTGTTTTGCGAATTCTTTT+AGG | - | chr4.2:31857097-31857116 | MS.gene83179:intron | 30.0% |
| !!! | ATAAGTGAGAAGCATTCTTT+TGG | - | chr4.2:31857553-31857572 | MS.gene83179:CDS | 30.0% |
| !!! | CTTTTGTTTTTCCTGAAAGA+TGG | - | chr4.2:31856499-31856518 | MS.gene83179:CDS | 30.0% |
| !!! | GGCTGTTTTAGTTTCATATA+AGG | - | chr4.2:31857439-31857458 | MS.gene83179:intron | 30.0% |
| AACTTGATACATCCGTTGTT+AGG | - | chr4.2:31860042-31860061 | MS.gene83179:CDS | 35.0% | |
| AAGATGATGAGCAACAGATT+AGG | - | chr4.2:31856415-31856434 | MS.gene83179:CDS | 35.0% | |
| ACCTTCAACAACAAGTATGT+TGG | + | chr4.2:31858635-31858654 | None:intergenic | 35.0% | |
| AGAATTCTCAAAGTGCAACA+TGG | + | chr4.2:31857777-31857796 | None:intergenic | 35.0% | |
| AGTATTTCCAAAACCCTGTT+TGG | + | chr4.2:31856784-31856803 | None:intergenic | 35.0% | |
| ATCATAATGTCTCTCAATGC+AGG | + | chr4.2:31858758-31858777 | None:intergenic | 35.0% | |
| ATTGTTATGGCTACTTACGT+TGG | - | chr4.2:31857416-31857435 | MS.gene83179:intron | 35.0% | |
| ATTTCTTTCTGCACCTATCA+AGG | - | chr4.2:31857651-31857670 | MS.gene83179:CDS | 35.0% | |
| CATCATCTTCTTCTTCATCA+TGG | + | chr4.2:31856404-31856423 | None:intergenic | 35.0% | |
| CATTTAATGTGCTTGGAAGT+TGG | - | chr4.2:31856570-31856589 | MS.gene83179:CDS | 35.0% | |
| CCTAGTTATCTCTTATTACC+AGG | + | chr4.2:31859266-31859285 | None:intergenic | 35.0% | |
| CCTGGTAATAAGAGATAACT+AGG | - | chr4.2:31859263-31859282 | MS.gene83179:intron | 35.0% | |
| CTTGTAAATCATGAGGAAAG+AGG | - | chr4.2:31857188-31857207 | MS.gene83179:intron | 35.0% | |
| CTTGTATTTGTCCATTCAAC+AGG | - | chr4.2:31859625-31859644 | MS.gene83179:intron | 35.0% | |
| GATAGCCTAATCAAACTTGT+CGG | - | chr4.2:31859325-31859344 | MS.gene83179:intron | 35.0% | |
| TAGTATCACACCACATTTAC+GGG | + | chr4.2:31859120-31859139 | None:intergenic | 35.0% | |
| TATAGGTACAATAGCAGCTA+AGG | - | chr4.2:31859938-31859957 | MS.gene83179:CDS | 35.0% | |
| TATGCATCTGGCATATTGTA+TGG | - | chr4.2:31859885-31859904 | MS.gene83179:CDS | 35.0% | |
| TATGCGTGTGATGATAAGTA+TGG | - | chr4.2:31859147-31859166 | MS.gene83179:intron | 35.0% | |
| TATTATTAGAGAACAAGGCC+AGG | + | chr4.2:31858904-31858923 | None:intergenic | 35.0% | |
| TGTATTGTGTATAGTCAGCA+AGG | + | chr4.2:31858318-31858337 | None:intergenic | 35.0% | |
| TTGTTATGGCTACTTACGTT+GGG | - | chr4.2:31857417-31857436 | MS.gene83179:intron | 35.0% | |
| TTTCCAATCCCAAATTCTTC+AGG | + | chr4.2:31857154-31857173 | None:intergenic | 35.0% | |
| ! | ACGCTAATATTTCTGTACTC+TGG | - | chr4.2:31858548-31858567 | MS.gene83179:CDS | 35.0% |
| ! | CTGAAAGATGGGATGTTTTA+GGG | - | chr4.2:31856511-31856530 | MS.gene83179:CDS | 35.0% |
| ! | GAAGAATTTGGGATTGGAAA+AGG | - | chr4.2:31857154-31857173 | MS.gene83179:intron | 35.0% |
| ! | GGGAATTTGGTAATTGAGAT+GGG | + | chr4.2:31856242-31856261 | None:intergenic | 35.0% |
| ! | GTATGTTCTTTTTCCAACCT+TGG | - | chr4.2:31856342-31856361 | MS.gene83179:CDS | 35.0% |
| ! | TGTTTATCCAAACAGGGTTT+TGG | - | chr4.2:31856774-31856793 | MS.gene83179:intron | 35.0% |
| ! | TTGAAATGCTTTGTTCAACC+TGG | - | chr4.2:31858202-31858221 | MS.gene83179:intron | 35.0% |
| !! | AAAGCACTGTTTCTGTTACA+AGG | - | chr4.2:31859727-31859746 | MS.gene83179:intron | 35.0% |
| !! | ACCAACATACTTGTTGTTGA+AGG | - | chr4.2:31858631-31858650 | MS.gene83179:intron | 35.0% |
| !! | GAGATAACTAGGTTTTGTGA+AGG | - | chr4.2:31859274-31859293 | MS.gene83179:intron | 35.0% |
| !! | TAACTAGGTTTTGTGAAGGA+TGG | - | chr4.2:31859278-31859297 | MS.gene83179:intron | 35.0% |
| !! | TTCTTTTAGGTAGACTTCTC+TGG | - | chr4.2:31857110-31857129 | MS.gene83179:intron | 35.0% |
| AAGTGAATCAACCAGAAGAG+AGG | + | chr4.2:31858403-31858422 | None:intergenic | 40.0% | |
| AATTGAGATGGGAAAGAGTG+TGG | + | chr4.2:31856231-31856250 | None:intergenic | 40.0% | |
| AGAGTGTGGAAATGAATGAG+AGG | + | chr4.2:31856217-31856236 | None:intergenic | 40.0% | |
| AGCTTTCATCCTATTAAGCC+TGG | - | chr4.2:31858883-31858902 | MS.gene83179:intron | 40.0% | |
| AGGAGGAAGAAGAAGAAGAA+GGG | - | chr4.2:31856466-31856485 | MS.gene83179:CDS | 40.0% | |
| AGTATCACACCACATTTACG+GGG | + | chr4.2:31859119-31859138 | None:intergenic | 40.0% | |
| AGTGAATCAACCAGAAGAGA+GGG | + | chr4.2:31858402-31858421 | None:intergenic | 40.0% | |
| ATAAGAGAAAATGGGCAGTG+CGG | + | chr4.2:31856263-31856282 | None:intergenic | 40.0% | |
| ATACTTTAGTTGCCTTGGCA+AGG | - | chr4.2:31857273-31857292 | MS.gene83179:intron | 40.0% | |
| ATCGAGTTTATCCTCTACCT+CGG | - | chr4.2:31858152-31858171 | MS.gene83179:intron | 40.0% | |
| ATGAGCAACAGATTAGGACT+AGG | - | chr4.2:31856421-31856440 | MS.gene83179:CDS | 40.0% | |
| CAAAAGCTTGTAAGGAAGCT+AGG | - | chr4.2:31858692-31858711 | MS.gene83179:intron | 40.0% | |
| CCATTCAACAGGGAAATTGT+AGG | - | chr4.2:31859636-31859655 | MS.gene83179:intron | 40.0% | |
| CCTAAAACATCCCATCTTTC+AGG | + | chr4.2:31856513-31856532 | None:intergenic | 40.0% | |
| CCTACAATTTCCCTGTTGAA+TGG | + | chr4.2:31859639-31859658 | None:intergenic | 40.0% | |
| CGTGTGATGATAAGTATGGT+AGG | - | chr4.2:31859151-31859170 | MS.gene83179:intron | 40.0% | |
| GAGGAGTTCCTGAAGAATTT+GGG | - | chr4.2:31857143-31857162 | MS.gene83179:intron | 40.0% | |
| GCTTAAACTAGAGAGGCAAT+GGG | + | chr4.2:31857860-31857879 | None:intergenic | 40.0% | |
| GTATTCCACAAGAATAACCG+AGG | + | chr4.2:31858172-31858191 | None:intergenic | 40.0% | |
| GTGCATTGCTTAAACTAGAG+AGG | + | chr4.2:31857867-31857886 | None:intergenic | 40.0% | |
| TCCTGCTATAAATGTGGCAA+TGG | - | chr4.2:31857319-31857338 | MS.gene83179:intron | 40.0% | |
| TCGAGATCCTGCTATAAATG+TGG | - | chr4.2:31857313-31857332 | MS.gene83179:intron | 40.0% | |
| TGAGCAACAGATTAGGACTA+GGG | - | chr4.2:31856422-31856441 | MS.gene83179:CDS | 40.0% | |
| TGAGGAGTTCCTGAAGAATT+TGG | - | chr4.2:31857142-31857161 | MS.gene83179:intron | 40.0% | |
| TGCTTAAACTAGAGAGGCAA+TGG | + | chr4.2:31857861-31857880 | None:intergenic | 40.0% | |
| TGGTTCCGACAAGTTTGATT+AGG | + | chr4.2:31859333-31859352 | None:intergenic | 40.0% | |
| TGTAAGGAAGCTAGGAGTAA+CGG | - | chr4.2:31858700-31858719 | MS.gene83179:intron | 40.0% | |
| TGTTATGGCTACTTACGTTG+GGG | - | chr4.2:31857418-31857437 | MS.gene83179:intron | 40.0% | |
| TTTATAGCTGCAACCATCCA+TGG | + | chr4.2:31857228-31857247 | None:intergenic | 40.0% | |
| ! | ACTGCCATATCCCCTAATTT+TGG | - | chr4.2:31859047-31859066 | MS.gene83179:CDS | 40.0% |
| ! | CAATTGCTTCATTTGAGACC+TGG | - | chr4.2:31859245-31859264 | MS.gene83179:intron | 40.0% |
| ! | CCTGAAAGATGGGATGTTTT+AGG | - | chr4.2:31856510-31856529 | MS.gene83179:CDS | 40.0% |
| ! | CGGGAATTTGGTAATTGAGA+TGG | + | chr4.2:31856243-31856262 | None:intergenic | 40.0% |
| ! | GTTCCTGAAGAATTTGGGAT+TGG | - | chr4.2:31857148-31857167 | MS.gene83179:intron | 40.0% |
| ! | TGTTCTTTTTCCAACCTTGG+AGG | - | chr4.2:31856345-31856364 | MS.gene83179:CDS | 40.0% |
| !! | AGGTTTTGTGAAGGATGGAA+GGG | - | chr4.2:31859283-31859302 | MS.gene83179:intron | 40.0% |
| !! | TAGGTTTTGTGAAGGATGGA+AGG | - | chr4.2:31859282-31859301 | MS.gene83179:intron | 40.0% |
| !!! | GTGAGAAGCATTCTTTTGGT+TGG | - | chr4.2:31857557-31857576 | MS.gene83179:CDS | 40.0% |
| ACCGATATCGGACCTAACAA+CGG | + | chr4.2:31860057-31860076 | None:intergenic | 45.0% | |
| AGAACAAGGCCAGGCTTAAT+AGG | + | chr4.2:31858895-31858914 | None:intergenic | 45.0% | |
| AGAGAACAGTGCAGTTACGA+GGG | + | chr4.2:31857390-31857409 | None:intergenic | 45.0% | |
| ATCTATTGGGTGGCTTCTAC+AGG | - | chr4.2:31857360-31857379 | MS.gene83179:intron | 45.0% | |
| ATTTCTGTACTCTGGTCCCA+GGG | - | chr4.2:31858556-31858575 | MS.gene83179:CDS | 45.0% | |
| CACAAGAATAACCGAGGTAG+AGG | + | chr4.2:31858166-31858185 | None:intergenic | 45.0% | |
| CACGAGACAACCGTAAGATT+AGG | + | chr4.2:31859524-31859543 | None:intergenic | 45.0% | |
| CCAGTTGTTGCATCCTTGAT+AGG | + | chr4.2:31857667-31857686 | None:intergenic | 45.0% | |
| CCTATCAAGGATGCAACAAC+TGG | - | chr4.2:31857664-31857683 | MS.gene83179:CDS | 45.0% | |
| CTCAAAGTGCAACATGGAAG+TGG | + | chr4.2:31857771-31857790 | None:intergenic | 45.0% | |
| CTCTACCTCGGTTATTCTTG+TGG | - | chr4.2:31858164-31858183 | MS.gene83179:intron | 45.0% | |
| CTTAGAAACTGCACTTGCCA+AGG | + | chr4.2:31858611-31858630 | None:intergenic | 45.0% | |
| GAGGAGGAAGAAGAAGAAGA+AGG | - | chr4.2:31856465-31856484 | MS.gene83179:CDS | 45.0% | |
| GCCATTGCCACATTTATAGC+AGG | + | chr4.2:31857323-31857342 | None:intergenic | 45.0% | |
| GCTATAAATGTGGCAATGGC+TGG | - | chr4.2:31857323-31857342 | MS.gene83179:intron | 45.0% | |
| GGATAAACTCGATGCTCATC+AGG | + | chr4.2:31858145-31858164 | None:intergenic | 45.0% | |
| GGCTCTTACATAGGCGTAAA+AGG | - | chr4.2:31859798-31859817 | MS.gene83179:intron | 45.0% | |
| TAAGAGAAAATGGGCAGTGC+GGG | + | chr4.2:31856262-31856281 | None:intergenic | 45.0% | |
| TATAAACGCAGACGCGTGTA+CGG | - | chr4.2:31856288-31856307 | MS.gene83179:CDS | 45.0% | |
| TCCGTTGTTAGGTCCGATAT+CGG | - | chr4.2:31860053-31860072 | MS.gene83179:CDS | 45.0% | |
| TCTAAGAGACCCCGTAAATG+TGG | - | chr4.2:31859107-31859126 | MS.gene83179:CDS | 45.0% | |
| TGATGAAGATGAAGTGGAGG+AGG | - | chr4.2:31856449-31856468 | MS.gene83179:CDS | 45.0% | |
| TGCGTGTAGCATACCATTGA+TGG | + | chr4.2:31858069-31858088 | None:intergenic | 45.0% | |
| TGGGATTGGAAAAGGGAACA+AGG | - | chr4.2:31857162-31857181 | MS.gene83179:intron | 45.0% | |
| TGTCAACTTCGACACTTCCT+TGG | - | chr4.2:31858591-31858610 | MS.gene83179:CDS | 45.0% | |
| TTACGCCTATGTAAGAGCCT+CGG | + | chr4.2:31859797-31859816 | None:intergenic | 45.0% | |
| TTTGAAGACACCACGCTGAA+TGG | + | chr4.2:31856322-31856341 | None:intergenic | 45.0% | |
| ! | AATTTTCGCGAACGCTGATG+AGG | - | chr4.2:31859674-31859693 | MS.gene83179:intron | 45.0% |
| ! | AGAGTTTTGCAAGCCATGGA+TGG | - | chr4.2:31857212-31857231 | MS.gene83179:intron | 45.0% |
| ! | AGGTAGAGTTTTGCAAGCCA+TGG | - | chr4.2:31857208-31857227 | MS.gene83179:intron | 45.0% |
| ! | TATTTCTGTACTCTGGTCCC+AGG | - | chr4.2:31858555-31858574 | MS.gene83179:CDS | 45.0% |
| ! | TCTTTTTCCAACCTTGGAGG+AGG | - | chr4.2:31856348-31856367 | MS.gene83179:CDS | 45.0% |
| ! | TGGTGATGAAGATGAAGTGG+AGG | - | chr4.2:31856446-31856465 | MS.gene83179:CDS | 45.0% |
| ! | TTTAGGGCTTGGACAAGCTA+TGG | - | chr4.2:31856527-31856546 | MS.gene83179:CDS | 45.0% |
| !! | CATCGGTAACGGATACTAGA+GGG | + | chr4.2:31859770-31859789 | None:intergenic | 45.0% |
| !! | GGTTTTGTGAAGGATGGAAG+GGG | - | chr4.2:31859284-31859303 | MS.gene83179:intron | 45.0% |
| !!! | AGATGGGATGTTTTAGGGCT+TGG | - | chr4.2:31856516-31856535 | MS.gene83179:CDS | 45.0% |
| !!! | TGGTGTTTTAAGAGGCGTGT+CGG | - | chr4.2:31859905-31859924 | MS.gene83179:CDS | 45.0% |
| !!! | TACATTTATTTTAAATTTTA+GGG | - | chr4.2:31857603-31857622 | MS.gene83179:CDS | 5.0% |
| !!! | TTACATTTATTTTAAATTTT+AGG | - | chr4.2:31857602-31857621 | MS.gene83179:CDS | 5.0% |
| AAATGGGCAGTGCGGGAATT+TGG | + | chr4.2:31856255-31856274 | None:intergenic | 50.0% | |
| AAGGATGGAAGGGGAAGGAA+AGG | - | chr4.2:31859293-31859312 | MS.gene83179:intron | 50.0% | |
| ACGCACAATGCTTGCATACC+AGG | - | chr4.2:31857720-31857739 | MS.gene83179:intron | 50.0% | |
| AGCATTGTGCGTTGAGCATC+TGG | + | chr4.2:31857712-31857731 | None:intergenic | 50.0% | |
| AGCTAGGAGTAACGGTGCTT+TGG | - | chr4.2:31858708-31858727 | MS.gene83179:intron | 50.0% | |
| AGTGTGGCGAGCGATCTATT+GGG | - | chr4.2:31857347-31857366 | MS.gene83179:intron | 50.0% | |
| CAAATTCAGCACCTCCTCCA+AGG | + | chr4.2:31856362-31856381 | None:intergenic | 50.0% | |
| CAACAGATTAGGACTAGGGC+TGG | - | chr4.2:31856426-31856445 | MS.gene83179:CDS | 50.0% | |
| CAAGTGTCTACCGGAACACA+TGG | + | chr4.2:31859849-31859868 | None:intergenic | 50.0% | |
| CAGAGAACAGTGCAGTTACG+AGG | + | chr4.2:31857391-31857410 | None:intergenic | 50.0% | |
| CCTCTAGTATCCGTTACCGA+TGG | - | chr4.2:31859768-31859787 | MS.gene83179:intron | 50.0% | |
| GGTTCATCTTCCATTCAGCG+TGG | - | chr4.2:31856309-31856328 | MS.gene83179:CDS | 50.0% | |
| TCTACCGGAACACATGGAGA+AGG | + | chr4.2:31859843-31859862 | None:intergenic | 50.0% | |
| TGGTTGCAGCTATAAAGCCG+CGG | - | chr4.2:31857232-31857251 | MS.gene83179:intron | 50.0% | |
| TGTGTTCCGGTAGACACTTG+TGG | - | chr4.2:31859849-31859868 | MS.gene83179:intron | 50.0% | |
| TTAGTTGCCTTGGCAAGGCT+TGG | - | chr4.2:31857278-31857297 | MS.gene83179:intron | 50.0% | |
| TTGTGAAGGATGGAAGGGGA+AGG | - | chr4.2:31859288-31859307 | MS.gene83179:intron | 50.0% | |
| TTGTTGCACAGCAGGGAACA+AGG | - | chr4.2:31859973-31859992 | MS.gene83179:CDS | 50.0% | |
| ! | CTTCTCTGGCACAGTTGATG+AGG | - | chr4.2:31857124-31857143 | MS.gene83179:intron | 50.0% |
| ! | GCTGGTGATGCATATGCATC+TGG | - | chr4.2:31859873-31859892 | MS.gene83179:intron | 50.0% |
| ! | GGCTGGTGATGAAGATGAAG+TGG | - | chr4.2:31856443-31856462 | MS.gene83179:CDS | 50.0% |
| !! | CCATCGGTAACGGATACTAG+AGG | + | chr4.2:31859771-31859790 | None:intergenic | 50.0% |
| ACCGGAACACATGGAGAAGG+AGG | + | chr4.2:31859840-31859859 | None:intergenic | 55.0% | |
| AGAAAGAGATCCACCAGCCG+CGG | + | chr4.2:31857252-31857271 | None:intergenic | 55.0% | |
| AGCCACTGTTGTTGCACAGC+AGG | - | chr4.2:31859965-31859984 | MS.gene83179:CDS | 55.0% | |
| CAGTGTGGCGAGCGATCTAT+TGG | - | chr4.2:31857346-31857365 | MS.gene83179:intron | 55.0% | |
| CCAGCACCACAAGTGTCTAC+CGG | + | chr4.2:31859858-31859877 | None:intergenic | 55.0% | |
| CCCTCCTTCTCCATGTGTTC+CGG | - | chr4.2:31859836-31859855 | MS.gene83179:intron | 55.0% | |
| CCGGAACACATGGAGAAGGA+GGG | + | chr4.2:31859839-31859858 | None:intergenic | 55.0% | |
| GACAGTTGACGATGTGCCCT+GGG | + | chr4.2:31858575-31858594 | None:intergenic | 55.0% | |
| GCCACTGTTGTTGCACAGCA+GGG | - | chr4.2:31859966-31859985 | MS.gene83179:CDS | 55.0% | |
| GGTCTCCGAGGCTCTTACAT+AGG | - | chr4.2:31859789-31859808 | MS.gene83179:intron | 55.0% | |
| GTAAGAGCCTCGGAGACCAT+CGG | + | chr4.2:31859787-31859806 | None:intergenic | 55.0% | |
| TCCCTGCTGTGCAACAACAG+TGG | + | chr4.2:31859970-31859989 | None:intergenic | 55.0% | |
| TGACAGTTGACGATGTGCCC+TGG | + | chr4.2:31858576-31858595 | None:intergenic | 55.0% | |
| TTCAGCACCTCCTCCAAGGT+TGG | + | chr4.2:31856358-31856377 | None:intergenic | 55.0% | |
| TTCTCACTCGCCCTCTCTTC+TGG | - | chr4.2:31858389-31858408 | MS.gene83179:intron | 55.0% | |
| AGCTATAAAGCCGCGGCTGG+TGG | - | chr4.2:31857239-31857258 | MS.gene83179:intron | 60.0% | |
| CCGGTAGACACTTGTGGTGC+TGG | - | chr4.2:31859855-31859874 | MS.gene83179:intron | 60.0% | |
| GCCTCGGAGACCATCGGTAA+CGG | + | chr4.2:31859781-31859800 | None:intergenic | 60.0% | |
| GTGGCGAGCGATCTATTGGG+TGG | - | chr4.2:31857350-31857369 | MS.gene83179:intron | 60.0% | |
| GTTGCCTTGGCAAGGCTTGG+AGG | - | chr4.2:31857281-31857300 | MS.gene83179:intron | 60.0% | |
| TCCGTTACCGATGGTCTCCG+AGG | - | chr4.2:31859777-31859796 | MS.gene83179:intron | 60.0% | |
| TGCAGCTATAAAGCCGCGGC+TGG | - | chr4.2:31857236-31857255 | MS.gene83179:intron | 60.0% | |
| TGTGGCAATGGCTGGCAGTG+TGG | - | chr4.2:31857331-31857350 | MS.gene83179:intron | 60.0% | |
| GCGACCTCCAAGCCTTGCCA+AGG | + | chr4.2:31857288-31857307 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 31856183 | 31860085 | 31856183 | ID=MS.gene83179 |
| chr4.2 | mRNA | 31856183 | 31860085 | 31856183 | ID=MS.gene83179.t1;Parent=MS.gene83179 |
| chr4.2 | exon | 31859884 | 31860085 | 31859884 | ID=MS.gene83179.t1.exon1;Parent=MS.gene83179.t1 |
| chr4.2 | CDS | 31859884 | 31860085 | 31859884 | ID=cds.MS.gene83179.t1;Parent=MS.gene83179.t1 |
| chr4.2 | exon | 31859720 | 31859736 | 31859720 | ID=MS.gene83179.t1.exon2;Parent=MS.gene83179.t1 |
| chr4.2 | CDS | 31859720 | 31859736 | 31859720 | ID=cds.MS.gene83179.t1;Parent=MS.gene83179.t1 |
| chr4.2 | exon | 31858887 | 31859149 | 31858887 | ID=MS.gene83179.t1.exon3;Parent=MS.gene83179.t1 |
| chr4.2 | CDS | 31858887 | 31859149 | 31858887 | ID=cds.MS.gene83179.t1;Parent=MS.gene83179.t1 |
| chr4.2 | exon | 31858527 | 31858644 | 31858527 | ID=MS.gene83179.t1.exon4;Parent=MS.gene83179.t1 |
| chr4.2 | CDS | 31858527 | 31858644 | 31858527 | ID=cds.MS.gene83179.t1;Parent=MS.gene83179.t1 |
| chr4.2 | exon | 31857483 | 31857691 | 31857483 | ID=MS.gene83179.t1.exon5;Parent=MS.gene83179.t1 |
| chr4.2 | CDS | 31857483 | 31857691 | 31857483 | ID=cds.MS.gene83179.t1;Parent=MS.gene83179.t1 |
| chr4.2 | exon | 31856183 | 31856621 | 31856183 | ID=MS.gene83179.t1.exon6;Parent=MS.gene83179.t1 |
| chr4.2 | CDS | 31856183 | 31856621 | 31856183 | ID=cds.MS.gene83179.t1;Parent=MS.gene83179.t1 |
| Gene Sequence |
| Protein sequence |
