Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92749.t1 | XP_003604081.1 | 96.7 | 419 | 6 | 2 | 1 | 411 | 154 | 572 | 1.40E-217 | 765.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92749.t1 | O22056 | 73.1 | 375 | 100 | 1 | 37 | 411 | 197 | 570 | 8.8e-149 | 528.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92749.t1 | G7J988 | 96.7 | 419 | 6 | 2 | 1 | 411 | 154 | 572 | 9.8e-218 | 765.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92749 | 0.848212 | 7.08E-60 | -1.69E-46 |
| MS.gene049173 | MS.gene92749 | 0.810132 | 1.34E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene92749 | 0.842084 | 3.21E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene92749 | 0.822658 | 2.11E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene92749 | 0.837892 | 3.98E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene92749 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene92749 | 0.867808 | 1.04E-65 | -1.69E-46 |
| MS.gene049427 | MS.gene92749 | 0.922906 | 5.34E-89 | -1.69E-46 |
| MS.gene049491 | MS.gene92749 | 0.841884 | 3.63E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene92749 | 0.834251 | 3.34E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene92749 | 0.892285 | 1.83E-74 | -1.69E-46 |
| MS.gene049627 | MS.gene92749 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene049661 | MS.gene92749 | 0.854815 | 9.57E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene92749 | 0.847182 | 1.36E-59 | -1.69E-46 |
| MS.gene049760 | MS.gene92749 | 0.849481 | 3.15E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene92749 | 0.858437 | 8.25E-63 | -1.69E-46 |
| MS.gene050076 | MS.gene92749 | 0.880791 | 4.10E-70 | -1.69E-46 |
| MS.gene050099 | MS.gene92749 | 0.821449 | 4.01E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene92749 | 0.863438 | 2.49E-64 | -1.69E-46 |
| MS.gene050165 | MS.gene92749 | 0.836444 | 9.32E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene92749 | 0.86695 | 1.96E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene92749 | 0.844164 | 8.96E-59 | -1.69E-46 |
| MS.gene050397 | MS.gene92749 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene92749 | 0.879056 | 1.70E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene92749 | 0.805998 | 1.02E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene92749 | 0.824689 | 7.05E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene92749 | 0.827181 | 1.80E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene92749 | 0.812058 | 5.13E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene92749 | 0.827726 | 1.33E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene92749 | 0.928057 | 4.94E-92 | -1.69E-46 |
| MS.gene050770 | MS.gene92749 | 0.931736 | 2.43E-94 | -1.69E-46 |
| MS.gene050772 | MS.gene92749 | 0.850268 | 1.90E-60 | -1.69E-46 |
| MS.gene050781 | MS.gene92749 | 0.829014 | 6.52E-55 | -1.69E-46 |
| MS.gene050783 | MS.gene92749 | 0.883496 | 4.27E-71 | -1.69E-46 |
| MS.gene050812 | MS.gene92749 | 0.869849 | 2.27E-66 | -1.69E-46 |
| MS.gene050950 | MS.gene92749 | 0.824074 | 9.83E-54 | -1.69E-46 |
| MS.gene05100 | MS.gene92749 | 0.867433 | 1.37E-65 | -1.69E-46 |
| MS.gene05101 | MS.gene92749 | 0.909162 | 7.72E-82 | -1.69E-46 |
| MS.gene05105 | MS.gene92749 | 0.850485 | 1.65E-60 | -1.69E-46 |
| MS.gene051228 | MS.gene92749 | 0.842567 | 2.39E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene92749 | 0.852827 | 3.57E-61 | -1.69E-46 |
| MS.gene051471 | MS.gene92749 | 0.878765 | 2.16E-69 | -1.69E-46 |
| MS.gene051582 | MS.gene92749 | 0.809452 | 1.88E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene92749 | 0.867627 | 1.19E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene92749 | 0.814133 | 1.80E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene92749 | 0.83838 | 2.98E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene92749 | 0.829782 | 4.25E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene92749 | 0.8394 | 1.62E-57 | -1.69E-46 |
| MS.gene051877 | MS.gene92749 | 0.825101 | 5.63E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene92749 | 0.867777 | 1.07E-65 | -1.69E-46 |
| MS.gene052188 | MS.gene92749 | 0.827496 | 1.52E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene92749 | 0.876185 | 1.71E-68 | -1.69E-46 |
| MS.gene052290 | MS.gene92749 | 0.876085 | 1.85E-68 | -1.69E-46 |
| MS.gene052310 | MS.gene92749 | 0.883433 | 4.50E-71 | -1.69E-46 |
| MS.gene052322 | MS.gene92749 | 0.847823 | 9.06E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene92749 | 0.892337 | 1.74E-74 | -1.69E-46 |
| MS.gene052379 | MS.gene92749 | 0.872713 | 2.57E-67 | -1.69E-46 |
| MS.gene052421 | MS.gene92749 | 0.844173 | 8.90E-59 | -1.69E-46 |
| MS.gene052481 | MS.gene92749 | 0.826923 | 2.08E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene92749 | 0.828821 | 7.26E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene92749 | 0.825899 | 3.64E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene92749 | 0.831994 | 1.22E-55 | -1.69E-46 |
| MS.gene052670 | MS.gene92749 | 0.825234 | 5.24E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene92749 | 0.872387 | 3.31E-67 | -1.69E-46 |
| MS.gene053103 | MS.gene92749 | 0.860032 | 2.74E-63 | -1.69E-46 |
| MS.gene053104 | MS.gene92749 | 0.853622 | 2.12E-61 | -1.69E-46 |
| MS.gene053107 | MS.gene92749 | 0.867877 | 9.90E-66 | -1.69E-46 |
| MS.gene053207 | MS.gene92749 | 0.85014 | 2.06E-60 | -1.69E-46 |
| MS.gene053209 | MS.gene92749 | 0.836077 | 1.16E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene92749 | 0.855335 | 6.76E-62 | -1.69E-46 |
| MS.gene053286 | MS.gene92749 | 0.8439 | 1.05E-58 | -1.69E-46 |
| MS.gene053322 | MS.gene92749 | 0.925094 | 2.92E-90 | -1.69E-46 |
| MS.gene053574 | MS.gene92749 | 0.814212 | 1.73E-51 | -1.69E-46 |
| MS.gene053579 | MS.gene92749 | 0.809901 | 1.50E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene92749 | 0.837153 | 6.15E-57 | -1.69E-46 |
| MS.gene053813 | MS.gene92749 | 0.803198 | 3.91E-49 | -1.69E-46 |
| MS.gene053915 | MS.gene92749 | 0.813466 | 2.52E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene92749 | 0.854724 | 1.02E-61 | -1.69E-46 |
| MS.gene054376 | MS.gene92749 | 0.923149 | 3.88E-89 | -1.69E-46 |
| MS.gene054408 | MS.gene92749 | 0.809066 | 2.27E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene92749 | 0.849161 | 3.86E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene92749 | 0.829245 | 5.73E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene92749 | 0.862005 | 6.88E-64 | -1.69E-46 |
| MS.gene054802 | MS.gene92749 | 0.913867 | 3.74E-84 | -1.69E-46 |
| MS.gene054803 | MS.gene92749 | 0.917274 | 6.48E-86 | -1.69E-46 |
| MS.gene054804 | MS.gene92749 | 0.916727 | 1.26E-85 | -1.69E-46 |
| MS.gene054955 | MS.gene92749 | 0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene05505 | MS.gene92749 | 0.846474 | 2.12E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene92749 | 0.826983 | 2.01E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene92749 | 0.824457 | 7.99E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene92749 | 0.859818 | 3.18E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene92749 | 0.870828 | 1.09E-66 | -1.69E-46 |
| MS.gene055362 | MS.gene92749 | 0.811205 | 7.87E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene92749 | 0.85872 | 6.79E-63 | -1.69E-46 |
| MS.gene055397 | MS.gene92749 | 0.913857 | 3.78E-84 | -1.69E-46 |
| MS.gene055412 | MS.gene92749 | 0.88776 | 1.08E-72 | -1.69E-46 |
| MS.gene055422 | MS.gene92749 | 0.842664 | 2.25E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene92749 | 0.839306 | 1.71E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene92749 | 0.915643 | 4.61E-85 | -1.69E-46 |
| MS.gene055502 | MS.gene92749 | 0.809307 | 2.02E-50 | -1.69E-46 |
| MS.gene055605 | MS.gene92749 | 0.801579 | 8.43E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene92749 | 0.827655 | 1.39E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene92749 | 0.817741 | 2.82E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene92749 | 0.871218 | 8.08E-67 | -1.69E-46 |
| MS.gene055722 | MS.gene92749 | 0.849529 | 3.05E-60 | -1.69E-46 |
| MS.gene055896 | MS.gene92749 | 0.859806 | 3.21E-63 | -1.69E-46 |
| MS.gene05592 | MS.gene92749 | 0.852757 | 3.74E-61 | -1.69E-46 |
| MS.gene055930 | MS.gene92749 | 0.808394 | 3.16E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene92749 | 0.806835 | 6.78E-50 | -1.69E-46 |
| MS.gene05602 | MS.gene92749 | 0.801466 | 8.89E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene92749 | 0.851664 | 7.66E-61 | -1.69E-46 |
| MS.gene056191 | MS.gene92749 | 0.808511 | 2.99E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene92749 | 0.856373 | 3.36E-62 | -1.69E-46 |
| MS.gene056407 | MS.gene92749 | 0.84567 | 3.51E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene92749 | 0.838016 | 3.69E-57 | -1.69E-46 |
| MS.gene056449 | MS.gene92749 | 0.817006 | 4.12E-52 | -1.69E-46 |
| MS.gene056452 | MS.gene92749 | 0.846189 | 2.54E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene92749 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene92749 | 0.860912 | 1.48E-63 | -1.69E-46 |
| MS.gene056612 | MS.gene92749 | 0.818048 | 2.40E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene92749 | 0.826136 | 3.20E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene92749 | 0.848663 | 5.31E-60 | -1.69E-46 |
| MS.gene056897 | MS.gene92749 | 0.855029 | 8.30E-62 | -1.69E-46 |
| MS.gene056903 | MS.gene92749 | 0.811212 | 7.84E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene92749 | 0.915559 | 5.10E-85 | -1.69E-46 |
| MS.gene05702 | MS.gene92749 | 0.815519 | 8.87E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene92749 | 0.856517 | 3.05E-62 | -1.69E-46 |
| MS.gene057124 | MS.gene92749 | 0.80145 | 8.95E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene92749 | 0.922882 | 5.51E-89 | -1.69E-46 |
| MS.gene057146 | MS.gene92749 | 0.891938 | 2.51E-74 | -1.69E-46 |
| MS.gene057246 | MS.gene92749 | 0.806202 | 9.22E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene92749 | 0.851894 | 6.59E-61 | -1.69E-46 |
| MS.gene057331 | MS.gene92749 | 0.836089 | 1.15E-56 | -1.69E-46 |
| MS.gene05733 | MS.gene92749 | 0.818594 | 1.81E-52 | -1.69E-46 |
| MS.gene05735 | MS.gene92749 | 0.802721 | 4.90E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene92749 | 0.875284 | 3.48E-68 | -1.69E-46 |
| MS.gene057775 | MS.gene92749 | 0.809486 | 1.85E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene92749 | 0.823319 | 1.48E-53 | -1.69E-46 |
| MS.gene058006 | MS.gene92749 | 0.811336 | 7.37E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene92749 | 0.864279 | 1.36E-64 | -1.69E-46 |
| MS.gene058082 | MS.gene92749 | 0.819437 | 1.16E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene92749 | 0.816748 | 4.71E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene92749 | 0.801517 | 8.67E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene92749 | 0.85636 | 3.39E-62 | -1.69E-46 |
| MS.gene058276 | MS.gene92749 | 0.805268 | 1.45E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene92749 | 0.903468 | 3.36E-79 | -1.69E-46 |
| MS.gene058323 | MS.gene92749 | 0.852829 | 3.57E-61 | -1.69E-46 |
| MS.gene058365 | MS.gene92749 | 0.822622 | 2.15E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene92749 | 0.838413 | 2.92E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene92749 | 0.821479 | 3.95E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene92749 | 0.916082 | 2.73E-85 | -1.69E-46 |
| MS.gene058723 | MS.gene92749 | 0.820553 | 6.46E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene92749 | 0.808778 | 2.62E-50 | -1.69E-46 |
| MS.gene058787 | MS.gene92749 | 0.829533 | 4.88E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene92749 | 0.839523 | 1.51E-57 | -1.69E-46 |
| MS.gene058993 | MS.gene92749 | 0.848847 | 4.72E-60 | -1.69E-46 |
| MS.gene059029 | MS.gene92749 | 0.865004 | 8.09E-65 | -1.69E-46 |
| MS.gene05907 | MS.gene92749 | 0.824273 | 8.82E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene92749 | 0.85294 | 3.32E-61 | -1.69E-46 |
| MS.gene059342 | MS.gene92749 | 0.800007 | 1.76E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene92749 | 0.841757 | 3.91E-58 | -1.69E-46 |
| MS.gene059518 | MS.gene92749 | 0.802745 | 4.85E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene92749 | 0.903546 | 3.10E-79 | -1.69E-46 |
| MS.gene059597 | MS.gene92749 | 0.848397 | 6.29E-60 | -1.69E-46 |
| MS.gene05959 | MS.gene92749 | 0.835432 | 1.68E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene92749 | 0.869568 | 2.81E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene92749 | 0.822697 | 2.06E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene92749 | 0.881306 | 2.68E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene92749 | 0.881323 | 2.64E-70 | -1.69E-46 |
| MS.gene059695 | MS.gene92749 | 0.883045 | 6.26E-71 | -1.69E-46 |
| MS.gene059708 | MS.gene92749 | 0.812067 | 5.11E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene92749 | 0.834995 | 2.17E-56 | -1.69E-46 |
| MS.gene059858 | MS.gene92749 | 0.852794 | 3.65E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene92749 | 0.829309 | 5.53E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene92749 | 0.842145 | 3.09E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene92749 | 0.948221 | 1.45E-106 | -1.69E-46 |
| MS.gene060193 | MS.gene92749 | 0.826317 | 2.90E-54 | -1.69E-46 |
| MS.gene060356 | MS.gene92749 | 0.820495 | 6.66E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene92749 | 0.805136 | 1.54E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene92749 | 0.819341 | 1.22E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene92749 | 0.82079 | 5.69E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene92749 | 0.869354 | 3.30E-66 | -1.69E-46 |
| MS.gene060818 | MS.gene92749 | 0.859511 | 3.93E-63 | -1.69E-46 |
| MS.gene060837 | MS.gene92749 | 0.802996 | 4.30E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene92749 | 0.827797 | 1.28E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene92749 | 0.847666 | 1.00E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene92749 | 0.839753 | 1.31E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene92749 | 0.801882 | 7.30E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene92749 | -0.826798 | 2.23E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene92749 | 0.878012 | 3.96E-69 | -1.69E-46 |
| MS.gene061171 | MS.gene92749 | 0.830289 | 3.19E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene92749 | 0.934217 | 5.68E-96 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92749.t1 | MTR_3g118290 | 96.659 | 419 | 6 | 2 | 1 | 411 | 154 | 572 | 0.0 | 827 |
| MS.gene92749.t1 | MTR_7g101840 | 36.565 | 361 | 224 | 1 | 53 | 408 | 192 | 552 | 6.50e-77 | 249 |
| MS.gene92749.t1 | MTR_1g063850 | 36.388 | 371 | 229 | 3 | 44 | 408 | 187 | 556 | 6.97e-75 | 243 |
| MS.gene92749.t1 | MTR_1g007370 | 31.398 | 379 | 240 | 5 | 39 | 409 | 181 | 547 | 1.35e-60 | 206 |
| MS.gene92749.t1 | MTR_3g033420 | 37.131 | 237 | 149 | 0 | 174 | 410 | 167 | 403 | 9.21e-48 | 168 |
| MS.gene92749.t1 | MTR_0172s0030 | 31.475 | 305 | 199 | 6 | 113 | 410 | 201 | 502 | 3.51e-43 | 158 |
| MS.gene92749.t1 | MTR_3g090900 | 28.824 | 340 | 226 | 7 | 85 | 410 | 177 | 514 | 2.36e-33 | 131 |
| MS.gene92749.t1 | MTR_1g007370 | 29.545 | 220 | 142 | 3 | 39 | 251 | 181 | 394 | 1.37e-29 | 119 |
| MS.gene92749.t1 | MTR_3g090900 | 25.556 | 270 | 185 | 6 | 54 | 308 | 145 | 413 | 4.49e-19 | 89.4 |
| MS.gene92749.t1 | MTR_3g033150 | 29.801 | 151 | 106 | 0 | 260 | 410 | 4 | 154 | 3.86e-16 | 75.9 |
| MS.gene92749.t1 | MTR_3g090900 | 28.022 | 182 | 116 | 6 | 85 | 252 | 177 | 357 | 3.28e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92749.t1 | AT1G08540 | 74.033 | 362 | 94 | 0 | 50 | 411 | 209 | 570 | 0.0 | 565 |
| MS.gene92749.t1 | AT2G36990 | 37.640 | 356 | 221 | 1 | 53 | 408 | 188 | 542 | 2.20e-79 | 255 |
| MS.gene92749.t1 | AT3G53920 | 34.405 | 311 | 198 | 2 | 100 | 409 | 264 | 569 | 1.91e-62 | 211 |
| MS.gene92749.t1 | AT5G13730 | 33.882 | 304 | 188 | 2 | 113 | 411 | 122 | 417 | 9.60e-54 | 184 |
| MS.gene92749.t1 | AT1G64860 | 29.775 | 356 | 228 | 9 | 63 | 410 | 159 | 500 | 6.08e-39 | 146 |
| MS.gene92749.t1 | AT5G24120 | 30.233 | 301 | 205 | 3 | 113 | 410 | 219 | 517 | 2.15e-38 | 145 |
| MS.gene92749.t1 | AT5G24120 | 30.233 | 301 | 205 | 3 | 113 | 410 | 219 | 517 | 2.15e-38 | 145 |
| MS.gene92749.t1 | AT5G24120 | 30.233 | 301 | 205 | 3 | 113 | 410 | 219 | 517 | 2.15e-38 | 145 |
| MS.gene92749.t1 | AT1G64860 | 29.677 | 310 | 197 | 8 | 63 | 364 | 159 | 455 | 3.29e-31 | 125 |
| MS.gene92749.t1 | AT3G53920 | 32.895 | 152 | 97 | 1 | 100 | 251 | 264 | 410 | 2.01e-28 | 115 |
Find 95 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGAGATCTGGGAGCTTT+TGG | 0.189205 | 3.1:+92959532 | None:intergenic |
| GCCAGAAGAGTCAGAGCTTC+TGG | 0.195456 | 3.1:-92961661 | MS.gene92749:CDS |
| CTAAGAAAACGTTTGAATTA+TGG | 0.201254 | 3.1:-92960757 | MS.gene92749:CDS |
| TCTTCGGCTGTTTCAGCTTC+AGG | 0.261013 | 3.1:+92959360 | None:intergenic |
| GAGAGAAACAGGTGATTAAA+TGG | 0.275402 | 3.1:-92959275 | MS.gene92749:CDS |
| ATCAGTTGCTAAGAATTATC+AGG | 0.278584 | 3.1:-92960686 | MS.gene92749:CDS |
| CCCAGAAGCTCTGACTCTTC+TGG | 0.279014 | 3.1:+92961660 | None:intergenic |
| AAACAGTTGTACAGTGAAAA+TGG | 0.280971 | 3.1:-92959631 | MS.gene92749:CDS |
| AACTTTCTGTTCTAGAGATC+TGG | 0.306670 | 3.1:+92959522 | None:intergenic |
| CATTAAGCAGTTCATGAAAA+AGG | 0.308002 | 3.1:-92959331 | MS.gene92749:CDS |
| CAGGTGATTAAATGGAGATT+TGG | 0.320492 | 3.1:-92959267 | MS.gene92749:CDS |
| GAAGAAGTTGCCGAAGCAAC+TGG | 0.327598 | 3.1:-92959592 | MS.gene92749:CDS |
| AGAGAAGTATGATGCTTCTA+AGG | 0.329199 | 3.1:-92960260 | MS.gene92749:CDS |
| TTCAGAGAACTTAATTTCTT+CGG | 0.359443 | 3.1:+92961498 | None:intergenic |
| CCAGCCCACATTTGCTCAAT+GGG | 0.361480 | 3.1:-92960809 | MS.gene92749:CDS |
| TTAAAGTCATCCTCTTGGTT+GGG | 0.376197 | 3.1:+92961769 | None:intergenic |
| GCTAAGAATTATCAGGGATC+TGG | 0.378393 | 3.1:-92960679 | MS.gene92749:CDS |
| TGAAGACACTGCAAGAGATT+GGG | 0.385412 | 3.1:-92959227 | MS.gene92749:CDS |
| TCGGCAACTTCTTCATCGTC+AGG | 0.396141 | 3.1:+92959601 | None:intergenic |
| ATGAAGACACTGCAAGAGAT+TGG | 0.396405 | 3.1:-92959228 | MS.gene92749:CDS |
| GCTCAATGGGCTACAATAGC+AGG | 0.397208 | 3.1:-92960796 | MS.gene92749:CDS |
| AGTTCTCAACCTATGCTCAT+TGG | 0.407789 | 3.1:-92960231 | MS.gene92749:CDS |
| TGAAGATGTTCCATTATATC+TGG | 0.410021 | 3.1:+92961799 | None:intergenic |
| TTAATCACCTGTTTCTCTCT+AGG | 0.411679 | 3.1:+92959279 | None:intergenic |
| TCTCAATCCTAGAGAGAAAC+AGG | 0.412404 | 3.1:-92959286 | MS.gene92749:CDS |
| GCCAGCCCACATTTGCTCAA+TGG | 0.421203 | 3.1:-92960810 | MS.gene92749:CDS |
| CCAGAAGAGTCAGAGCTTCT+GGG | 0.422406 | 3.1:-92961660 | MS.gene92749:CDS |
| AAAGGACCTGGAAAAGGTAT+TGG | 0.433707 | 3.1:-92959313 | MS.gene92749:CDS |
| CATCGACAGCCCAGTTGCTT+CGG | 0.435866 | 3.1:+92959582 | None:intergenic |
| GGCAATGGATACAGCATCTT+CGG | 0.444268 | 3.1:+92961837 | None:intergenic |
| CTGCTTAATGAGCTGTTCTT+CGG | 0.445939 | 3.1:+92959344 | None:intergenic |
| TGCTCATTGGTGGATTAAAC+AGG | 0.447444 | 3.1:-92960218 | MS.gene92749:CDS |
| ACCAGCAGGACCAGATATAA+TGG | 0.448188 | 3.1:-92961809 | MS.gene92749:CDS |
| GGTGGTGGAACCAGACTTGA+AGG | 0.448899 | 3.1:+92961615 | None:intergenic |
| TGGGATGAGTCTGCAAGATC+TGG | 0.448927 | 3.1:-92960659 | MS.gene92749:CDS |
| GCTTAACAGTTCCACATGGT+GGG | 0.453802 | 3.1:-92959682 | MS.gene92749:intron |
| GAGAACTTAATTTCTTCGGA+TGG | 0.458689 | 3.1:+92961502 | None:intergenic |
| GGAAATGATGGGTGTAAGTA+GGG | 0.462570 | 3.1:-92959205 | MS.gene92749:CDS |
| TAAGTTCTCTGAAGGAATAC+AGG | 0.465978 | 3.1:-92961488 | MS.gene92749:intron |
| GGGAAATGATGGGTGTAAGT+AGG | 0.467729 | 3.1:-92959206 | MS.gene92749:CDS |
| CTTGAAGGAGACGATGTTTG+TGG | 0.468675 | 3.1:+92961630 | None:intergenic |
| TCCATTATATCTGGTCCTGC+TGG | 0.469713 | 3.1:+92961808 | None:intergenic |
| GGATGCCGCGGGCTTGTAAG+AGG | 0.472869 | 3.1:-92960286 | MS.gene92749:CDS |
| TCCTGCTGGTCCAGTGGCAA+TGG | 0.473175 | 3.1:+92961822 | None:intergenic |
| AGATCTCTAGAACAGAAAGT+TGG | 0.474573 | 3.1:-92959520 | MS.gene92749:CDS |
| AACATCGTCTCCTTCAAGTC+TGG | 0.484299 | 3.1:-92961625 | MS.gene92749:CDS |
| ATTAAAGTCATCCTCTTGGT+TGG | 0.488896 | 3.1:+92961768 | None:intergenic |
| CTAAGAATTATCAGGGATCT+GGG | 0.490714 | 3.1:-92960678 | MS.gene92749:CDS |
| GATCTCTAGAACAGAAAGTT+GGG | 0.490872 | 3.1:-92959519 | MS.gene92749:CDS |
| GGCTTAACAGTTCCACATGG+TGG | 0.491941 | 3.1:-92959683 | MS.gene92749:intron |
| ACTTTCTGTTCTAGAGATCT+GGG | 0.492366 | 3.1:+92959523 | None:intergenic |
| GCAAGAGATTGGGGAAATGA+TGG | 0.494350 | 3.1:-92959217 | MS.gene92749:CDS |
| TCTCAACCTATGCTCATTGG+TGG | 0.502003 | 3.1:-92960228 | MS.gene92749:CDS |
| GGTGGATTAAACAGGCAGTT+CGG | 0.505718 | 3.1:-92960210 | MS.gene92749:CDS |
| TCCATTGCCACTGGACCAGC+AGG | 0.505748 | 3.1:-92961823 | MS.gene92749:CDS |
| TAAAGTCATCCTCTTGGTTG+GGG | 0.508635 | 3.1:+92961770 | None:intergenic |
| AAAATACTGCTGCAAATGCT+TGG | 0.508949 | 3.1:+92959125 | None:intergenic |
| TGGAGATTTGGTATGGATGA+TGG | 0.516643 | 3.1:-92959255 | MS.gene92749:CDS |
| CATCATTAAAGTCATCCTCT+TGG | 0.522501 | 3.1:+92961764 | None:intergenic |
| ATCTGGTCCTGCTGGTCCAG+TGG | 0.527770 | 3.1:+92961816 | None:intergenic |
| CCCATTGAGCAAATGTGGGC+TGG | 0.527803 | 3.1:+92960809 | None:intergenic |
| GTTGTTCTTAAGTAACGCAA+TGG | 0.530950 | 3.1:+92961550 | None:intergenic |
| TCAAGTCTGGTTCCACCACC+AGG | 0.536953 | 3.1:-92961612 | MS.gene92749:CDS |
| GATTAAATGGAGATTTGGTA+TGG | 0.540033 | 3.1:-92959262 | MS.gene92749:CDS |
| CTTAACAGTTCCACATGGTG+GGG | 0.543723 | 3.1:-92959681 | MS.gene92749:intron |
| AGACTGAAAGTTTAAGACTC+TGG | 0.548233 | 3.1:+92959491 | None:intergenic |
| TGTAGCCCATTGAGCAAATG+TGG | 0.551130 | 3.1:+92960804 | None:intergenic |
| GAAGAAATTAAGTTCTCTGA+AGG | 0.563158 | 3.1:-92961496 | MS.gene92749:CDS |
| GAAGACACTGCAAGAGATTG+GGG | 0.566948 | 3.1:-92959226 | MS.gene92749:CDS |
| CTCAATGGGCTACAATAGCA+GGG | 0.569497 | 3.1:-92960795 | MS.gene92749:CDS |
| GAGAAGTATGATGCTTCTAA+GGG | 0.570079 | 3.1:-92960259 | MS.gene92749:CDS |
| CAACTGGGCTGTCGATGAAG+AGG | 0.570194 | 3.1:-92959576 | MS.gene92749:CDS |
| AAGAGTCAGAGCTTCTGGGA+AGG | 0.580062 | 3.1:-92961656 | MS.gene92749:CDS |
| GATGCTGTATCCATTGCCAC+TGG | 0.580093 | 3.1:-92961832 | MS.gene92749:CDS |
| ACTAGTATAGATGCAAGATC+CGG | 0.582105 | 3.1:-92961703 | MS.gene92749:CDS |
| TTTAATCCACCAATGAGCAT+AGG | 0.584506 | 3.1:+92960222 | None:intergenic |
| AATCACTTTCTGTTCAGTCA+AGG | 0.588234 | 3.1:-92960186 | MS.gene92749:CDS |
| GAGTCTGCAAGATCTGGTCC+AGG | 0.588401 | 3.1:-92960653 | MS.gene92749:intron |
| GGTTACAGGAAGGATGCCGC+GGG | 0.590724 | 3.1:-92960297 | MS.gene92749:intron |
| CGAGGAACTTGAAGATGTAG+AGG | 0.592036 | 3.1:-92961740 | MS.gene92749:CDS |
| TTAACAGTTCCACATGGTGG+GGG | 0.603234 | 3.1:-92959680 | MS.gene92749:intron |
| AAGAAGTTGCCGAAGCAACT+GGG | 0.609388 | 3.1:-92959591 | MS.gene92749:CDS |
| TCAGTTGCTAAGAATTATCA+GGG | 0.610615 | 3.1:-92960685 | MS.gene92749:CDS |
| GGGTTACAGGAAGGATGCCG+CGG | 0.612454 | 3.1:-92960298 | MS.gene92749:intron |
| CAAGAGATTGGGGAAATGAT+GGG | 0.622941 | 3.1:-92959216 | MS.gene92749:CDS |
| GATTTGGTATGGATGATGGA+AGG | 0.625281 | 3.1:-92959251 | MS.gene92749:CDS |
| GGATGACTTTAATGATGTCG+AGG | 0.634731 | 3.1:-92961758 | MS.gene92749:CDS |
| TCACATTAGCCCCAACCAAG+AGG | 0.641102 | 3.1:-92961779 | MS.gene92749:CDS |
| GAACAACAACTAGAACTACA+AGG | 0.641229 | 3.1:-92961534 | MS.gene92749:CDS |
| AAAGCGTGTTCGTACACAAG+AGG | 0.653089 | 3.1:-92961587 | MS.gene92749:CDS |
| GGCAACTTACAAAGTGAAGG+AGG | 0.666025 | 3.1:-92959659 | MS.gene92749:CDS |
| CTGCACCTCTTACAAGCCCG+CGG | 0.671463 | 3.1:+92960281 | None:intergenic |
| TTTGGCTTAACAGTTCCACA+TGG | 0.676694 | 3.1:-92959686 | MS.gene92749:intron |
| TCAATGGGCTACAATAGCAG+GGG | 0.712751 | 3.1:-92960794 | MS.gene92749:CDS |
| GTAGCCCATTGAGCAAATGT+GGG | 0.718383 | 3.1:+92960805 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATATAACGATAAATATT+GGG | + | chr3.1:92959744-92959763 | None:intergenic | 15.0% |
| !!! | ATGACAAATTTTAAAACTAT+AGG | - | chr3.1:92960423-92960442 | MS.gene92749:intron | 15.0% |
| !! | GAAAGAATATTAATAGTGAA+AGG | - | chr3.1:92959890-92959909 | MS.gene92749:intron | 20.0% |
| !! | GAAGATATAACGATAAATAT+TGG | + | chr3.1:92959745-92959764 | None:intergenic | 20.0% |
| !!! | AGACTTTTTTGCAATATTTT+TGG | - | chr3.1:92961259-92961278 | MS.gene92749:intron | 20.0% |
| !!! | ATAATTCAAACGTTTTCTTA+GGG | + | chr3.1:92960207-92960226 | None:intergenic | 20.0% |
| !!! | ATATAATTTGAAATATGCAC+TGG | - | chr3.1:92960397-92960416 | MS.gene92749:intron | 20.0% |
| !!! | TATAATTTGAAATATGCACT+GGG | - | chr3.1:92960398-92960417 | MS.gene92749:intron | 20.0% |
| !!! | TATTCATTTTTCTGATACAT+TGG | - | chr3.1:92961548-92961567 | MS.gene92749:CDS | 20.0% |
| ! | AACACATCTTAAATCAAAAG+AGG | - | chr3.1:92960487-92960506 | MS.gene92749:intron | 25.0% |
| ! | AAGATAAAGATAATACTCAC+TGG | + | chr3.1:92960815-92960834 | None:intergenic | 25.0% |
| ! | AATGAAAATATTTCCATGCA+TGG | + | chr3.1:92960855-92960874 | None:intergenic | 25.0% |
| ! | ATAGTTAAATGGTTGATTAC+TGG | + | chr3.1:92960637-92960656 | None:intergenic | 25.0% |
| ! | ATCAACTGAATTATCAATCT+AGG | - | chr3.1:92959951-92959970 | MS.gene92749:intron | 25.0% |
| ! | CACAAATTTGAACAAGATTA+GGG | + | chr3.1:92961500-92961519 | None:intergenic | 25.0% |
| ! | CTAAGAAAACGTTTGAATTA+TGG | - | chr3.1:92960206-92960225 | MS.gene92749:CDS | 25.0% |
| ! | TATGAGATCCTGAATTATAT+TGG | + | chr3.1:92960090-92960109 | None:intergenic | 25.0% |
| ! | TCAGAAAAATGAATATCACA+TGG | + | chr3.1:92961543-92961562 | None:intergenic | 25.0% |
| ! | TTCAGAGAACTTAATTTCTT+CGG | + | chr3.1:92959468-92959487 | None:intergenic | 25.0% |
| !! | AAAGCTTGTTTAGAACAATA+TGG | - | chr3.1:92959663-92959682 | MS.gene92749:CDS | 25.0% |
| !! | CAATATTTTGCTAGAAAGTA+CGG | - | chr3.1:92960349-92960368 | MS.gene92749:intron | 25.0% |
| !! | CATAATTCAAACGTTTTCTT+AGG | + | chr3.1:92960208-92960227 | None:intergenic | 25.0% |
| !! | TTGGCAATTTTCAAATAAAC+AGG | + | chr3.1:92960879-92960898 | None:intergenic | 25.0% |
| !! | TTTCTAGCAAAATATTGTAC+AGG | + | chr3.1:92960346-92960365 | None:intergenic | 25.0% |
| !!! | ACCATTTAACTATTTTTCGT+TGG | - | chr3.1:92960644-92960663 | MS.gene92749:intron | 25.0% |
| !!! | AGACTTTTGTTATAAAACCT+AGG | + | chr3.1:92959529-92959548 | None:intergenic | 25.0% |
| !!! | CCATTTAACTATTTTTCGTT+GGG | - | chr3.1:92960645-92960664 | MS.gene92749:intron | 25.0% |
| AAACAGTTGTACAGTGAAAA+TGG | - | chr3.1:92961332-92961351 | MS.gene92749:intron | 30.0% | |
| ACTATCTATAAAGTGGTACA+CGG | - | chr3.1:92961196-92961215 | MS.gene92749:intron | 30.0% | |
| ATAACAAAAGTCTACTATCG+CGG | - | chr3.1:92959536-92959555 | MS.gene92749:CDS | 30.0% | |
| ATAACTGTTCATTTGATCAC+AGG | - | chr3.1:92959868-92959887 | MS.gene92749:intron | 30.0% | |
| ATCAGTTGCTAAGAATTATC+AGG | - | chr3.1:92960277-92960296 | MS.gene92749:CDS | 30.0% | |
| CATGTTGAATATCACAAGAA+TGG | + | chr3.1:92960577-92960596 | None:intergenic | 30.0% | |
| CATTAAGCAGTTCATGAAAA+AGG | - | chr3.1:92961632-92961651 | MS.gene92749:CDS | 30.0% | |
| CATTCTTGTGATATTCAACA+TGG | - | chr3.1:92960575-92960594 | MS.gene92749:intron | 30.0% | |
| CCCAACGAAAAATAGTTAAA+TGG | + | chr3.1:92960648-92960667 | None:intergenic | 30.0% | |
| CGATAAATATTGGGTGATTT+AGG | + | chr3.1:92959735-92959754 | None:intergenic | 30.0% | |
| GAAGAAATTAAGTTCTCTGA+AGG | - | chr3.1:92959467-92959486 | MS.gene92749:intron | 30.0% | |
| GCACAAATTTGAACAAGATT+AGG | + | chr3.1:92961501-92961520 | None:intergenic | 30.0% | |
| TCAGTTGCTAAGAATTATCA+GGG | - | chr3.1:92960278-92960297 | MS.gene92749:CDS | 30.0% | |
| TCGTTGAACAATCATCAATT+AGG | - | chr3.1:92961068-92961087 | MS.gene92749:intron | 30.0% | |
| TGAAGATGTTCCATTATATC+TGG | + | chr3.1:92959167-92959186 | None:intergenic | 30.0% | |
| TTTCAAATTATATCCGTGTG+TGG | + | chr3.1:92960390-92960409 | None:intergenic | 30.0% | |
| ! | AAATTGAGTCATGTGCTTTT+AGG | - | chr3.1:92961793-92961812 | MS.gene92749:CDS | 30.0% |
| ! | CTCTATGAGCTTCTATTTTA+CGG | + | chr3.1:92960927-92960946 | None:intergenic | 30.0% |
| ! | GATTAAATGGAGATTTGGTA+TGG | - | chr3.1:92961701-92961720 | MS.gene92749:CDS | 30.0% |
| ! | TGTAACATTCTTTCCTTTTC+TGG | + | chr3.1:92959837-92959856 | None:intergenic | 30.0% |
| !! | ATGTTGGTTCAACAAAAACA+AGG | - | chr3.1:92960991-92961010 | MS.gene92749:intron | 30.0% |
| !! | TATAAAACCTAGGTTCTAAG+TGG | + | chr3.1:92959519-92959538 | None:intergenic | 30.0% |
| AAAATACTGCTGCAAATGCT+TGG | + | chr3.1:92961841-92961860 | None:intergenic | 35.0% | |
| AAAGCTCGAAAAACTTCAAG+AGG | - | chr3.1:92960109-92960128 | MS.gene92749:intron | 35.0% | |
| AATCACTTTCTGTTCAGTCA+AGG | - | chr3.1:92960777-92960796 | MS.gene92749:CDS | 35.0% | |
| AATTATATTGGCAGGAGAAG+AGG | + | chr3.1:92960078-92960097 | None:intergenic | 35.0% | |
| ACCACTTTATAGATAGTCCA+CGG | + | chr3.1:92961193-92961212 | None:intergenic | 35.0% | |
| ACTAGTATAGATGCAAGATC+CGG | - | chr3.1:92959260-92959279 | MS.gene92749:CDS | 35.0% | |
| AGATCCTGAATTATATTGGC+AGG | + | chr3.1:92960086-92960105 | None:intergenic | 35.0% | |
| ATATATCTCAGTGCCAGAAA+AGG | - | chr3.1:92959821-92959840 | MS.gene92749:intron | 35.0% | |
| ATGATTGTTCAACGAGAACA+GGG | + | chr3.1:92961063-92961082 | None:intergenic | 35.0% | |
| ATTAAAGTCATCCTCTTGGT+TGG | + | chr3.1:92959198-92959217 | None:intergenic | 35.0% | |
| CAGGTGATTAAATGGAGATT+TGG | - | chr3.1:92961696-92961715 | MS.gene92749:CDS | 35.0% | |
| CATCATTAAAGTCATCCTCT+TGG | + | chr3.1:92959202-92959221 | None:intergenic | 35.0% | |
| CTAAGAATTATCAGGGATCT+GGG | - | chr3.1:92960285-92960304 | MS.gene92749:CDS | 35.0% | |
| CTTGTTCAAATTTGTGCTTC+AGG | - | chr3.1:92961504-92961523 | MS.gene92749:CDS | 35.0% | |
| GAACAACAACTAGAACTACA+AGG | - | chr3.1:92959429-92959448 | MS.gene92749:intron | 35.0% | |
| GAGAACTTAATTTCTTCGGA+TGG | + | chr3.1:92959464-92959483 | None:intergenic | 35.0% | |
| GAGAGAAACAGGTGATTAAA+TGG | - | chr3.1:92961688-92961707 | MS.gene92749:CDS | 35.0% | |
| GTTGTTCTTAAGTAACGCAA+TGG | + | chr3.1:92959416-92959435 | None:intergenic | 35.0% | |
| TATTTCTTTCTGACCATGCA+TGG | - | chr3.1:92960839-92960858 | MS.gene92749:CDS | 35.0% | |
| TGTACAGGTGAAAATATACC+TGG | + | chr3.1:92960331-92960350 | None:intergenic | 35.0% | |
| TTAAAGTCATCCTCTTGGTT+GGG | + | chr3.1:92959197-92959216 | None:intergenic | 35.0% | |
| TTAGTATGAGTCATTGCACT+TGG | - | chr3.1:92960526-92960545 | MS.gene92749:intron | 35.0% | |
| TTCTCCTGCCAATATAATTC+AGG | - | chr3.1:92960079-92960098 | MS.gene92749:intron | 35.0% | |
| TTGTTGAACCAACATCAATC+AGG | + | chr3.1:92960986-92961005 | None:intergenic | 35.0% | |
| TTTAATCCACCAATGAGCAT+AGG | + | chr3.1:92960744-92960763 | None:intergenic | 35.0% | |
| ! | AGAAGTCATTGTTGGAGTTT+TGG | + | chr3.1:92960898-92960917 | None:intergenic | 35.0% |
| ! | AGACTGAAAGTTTAAGACTC+TGG | + | chr3.1:92961475-92961494 | None:intergenic | 35.0% |
| ! | AGAGAAGTATGATGCTTCTA+AGG | - | chr3.1:92960703-92960722 | MS.gene92749:CDS | 35.0% |
| ! | ATCAAGAGCATATGAGAGAA+TGG | + | chr3.1:92959700-92959719 | None:intergenic | 35.0% |
| ! | GAGAAGTATGATGCTTCTAA+GGG | - | chr3.1:92960704-92960723 | MS.gene92749:CDS | 35.0% |
| ! | TAAGTTCTCTGAAGGAATAC+AGG | - | chr3.1:92959475-92959494 | MS.gene92749:intron | 35.0% |
| ! | TAGAAAGTACGGACACTAAA+GGG | - | chr3.1:92960360-92960379 | MS.gene92749:intron | 35.0% |
| ! | TGAGCTTCTATTTTACGGAA+TGG | + | chr3.1:92960922-92960941 | None:intergenic | 35.0% |
| ! | TTAATCACCTGTTTCTCTCT+AGG | + | chr3.1:92961687-92961706 | None:intergenic | 35.0% |
| !! | AACTTTCTGTTCTAGAGATC+TGG | + | chr3.1:92961444-92961463 | None:intergenic | 35.0% |
| !! | ACTATTTTTCGTTGGGTTAC+AGG | - | chr3.1:92960652-92960671 | MS.gene92749:intron | 35.0% |
| !! | ACTTTCTGTTCTAGAGATCT+GGG | + | chr3.1:92961443-92961462 | None:intergenic | 35.0% |
| !! | AGATCTCTAGAACAGAAAGT+TGG | - | chr3.1:92961443-92961462 | MS.gene92749:intron | 35.0% |
| !! | GATCTCTAGAACAGAAAGTT+GGG | - | chr3.1:92961444-92961463 | MS.gene92749:intron | 35.0% |
| !!! | TTCTGGCTTTTCTTTCTGTT+TGG | + | chr3.1:92959289-92959308 | None:intergenic | 35.0% |
| AAGAACTGCAGTCTCAATGT+TGG | + | chr3.1:92959588-92959607 | None:intergenic | 40.0% | |
| AAGAGTCCACACTTCTTCAA+TGG | - | chr3.1:92960609-92960628 | MS.gene92749:intron | 40.0% | |
| ACAATCAACGAATGTTGACG+CGG | + | chr3.1:92961143-92961162 | None:intergenic | 40.0% | |
| AGTTCTCAACCTATGCTCAT+TGG | - | chr3.1:92960732-92960751 | MS.gene92749:CDS | 40.0% | |
| ATAAGTACACCAATTCACCG+TGG | - | chr3.1:92961173-92961192 | MS.gene92749:intron | 40.0% | |
| ATAGATAGTCCACGGTGAAT+TGG | + | chr3.1:92961185-92961204 | None:intergenic | 40.0% | |
| ATGAAGACACTGCAAGAGAT+TGG | - | chr3.1:92961735-92961754 | MS.gene92749:CDS | 40.0% | |
| CAAGAGATTGGGGAAATGAT+GGG | - | chr3.1:92961747-92961766 | MS.gene92749:CDS | 40.0% | |
| CATGAAAAAGGACCTGGAAA+AGG | - | chr3.1:92961644-92961663 | MS.gene92749:CDS | 40.0% | |
| CTGCTTAATGAGCTGTTCTT+CGG | + | chr3.1:92961622-92961641 | None:intergenic | 40.0% | |
| GACATTGACCTGATTGATGT+TGG | - | chr3.1:92960975-92960994 | MS.gene92749:intron | 40.0% | |
| GATGATTGTTCAACGAGAAC+AGG | + | chr3.1:92961064-92961083 | None:intergenic | 40.0% | |
| GCTAAGAATTATCAGGGATC+TGG | - | chr3.1:92960284-92960303 | MS.gene92749:CDS | 40.0% | |
| GGAGAAGAGGCAAATGAATT+AGG | + | chr3.1:92960065-92960084 | None:intergenic | 40.0% | |
| GGATGACTTTAATGATGTCG+AGG | - | chr3.1:92959205-92959224 | MS.gene92749:CDS | 40.0% | |
| TAAAGTCATCCTCTTGGTTG+GGG | + | chr3.1:92959196-92959215 | None:intergenic | 40.0% | |
| TACCACAATCGTTAGTGTGA+CGG | - | chr3.1:92959633-92959652 | MS.gene92749:CDS | 40.0% | |
| TCTCAATCCTAGAGAGAAAC+AGG | - | chr3.1:92961677-92961696 | MS.gene92749:CDS | 40.0% | |
| TGAAGACACTGCAAGAGATT+GGG | - | chr3.1:92961736-92961755 | MS.gene92749:CDS | 40.0% | |
| TGATTGTTCAACGAGAACAG+GGG | + | chr3.1:92961062-92961081 | None:intergenic | 40.0% | |
| TGCATTACCACTTAGAACCT+AGG | - | chr3.1:92959509-92959528 | MS.gene92749:CDS | 40.0% | |
| ! | AAAGGACCTGGAAAAGGTAT+TGG | - | chr3.1:92961650-92961669 | MS.gene92749:CDS | 40.0% |
| ! | ACCGTGGACTATCTATAAAG+TGG | - | chr3.1:92961189-92961208 | MS.gene92749:intron | 40.0% |
| ! | AGAAAGTACGGACACTAAAG+GGG | - | chr3.1:92960361-92960380 | MS.gene92749:intron | 40.0% |
| ! | CTAGAAAGTACGGACACTAA+AGG | - | chr3.1:92960359-92960378 | MS.gene92749:intron | 40.0% |
| ! | TGGAGATTTGGTATGGATGA+TGG | - | chr3.1:92961708-92961727 | MS.gene92749:CDS | 40.0% |
| ! | TGGCTTTTCTTTCTGTTTGG+CGG | + | chr3.1:92959286-92959305 | None:intergenic | 40.0% |
| ! | TTTGGCTTAACAGTTCCACA+TGG | - | chr3.1:92961277-92961296 | MS.gene92749:intron | 40.0% |
| ! | TTTTTCGTTGGGTTACAGGA+AGG | - | chr3.1:92960656-92960675 | MS.gene92749:CDS | 40.0% |
| !! | GATTTGGTATGGATGATGGA+AGG | - | chr3.1:92961712-92961731 | MS.gene92749:CDS | 40.0% |
| !! | GGAAATGATGGGTGTAAGTA+GGG | - | chr3.1:92961758-92961777 | MS.gene92749:CDS | 40.0% |
| !! | TGCTCATTGGTGGATTAAAC+AGG | - | chr3.1:92960745-92960764 | MS.gene92749:CDS | 40.0% |
| AAAGCGTGTTCGTACACAAG+AGG | - | chr3.1:92959376-92959395 | MS.gene92749:CDS | 45.0% | |
| AACATCGTCTCCTTCAAGTC+TGG | - | chr3.1:92959338-92959357 | MS.gene92749:CDS | 45.0% | |
| AAGAAGTTGCCGAAGCAACT+GGG | - | chr3.1:92961372-92961391 | MS.gene92749:intron | 45.0% | |
| ACCAGCAGGACCAGATATAA+TGG | - | chr3.1:92959154-92959173 | MS.gene92749:CDS | 45.0% | |
| ATTGTTCAACGAGAACAGGG+GGG | + | chr3.1:92961060-92961079 | None:intergenic | 45.0% | |
| CGAGGAACTTGAAGATGTAG+AGG | - | chr3.1:92959223-92959242 | MS.gene92749:CDS | 45.0% | |
| CTGGAACCATTGAAGAAGTG+TGG | + | chr3.1:92960618-92960637 | None:intergenic | 45.0% | |
| CTTAACAGTTCCACATGGTG+GGG | - | chr3.1:92961282-92961301 | MS.gene92749:intron | 45.0% | |
| CTTGAAGGAGACGATGTTTG+TGG | + | chr3.1:92959336-92959355 | None:intergenic | 45.0% | |
| GAAGACACTGCAAGAGATTG+GGG | - | chr3.1:92961737-92961756 | MS.gene92749:CDS | 45.0% | |
| GACCTTGCAGAAAAATGTGG+CGG | - | chr3.1:92960131-92960150 | MS.gene92749:intron | 45.0% | |
| GAGGACCTTGCAGAAAAATG+TGG | - | chr3.1:92960128-92960147 | MS.gene92749:intron | 45.0% | |
| GATTGTTCAACGAGAACAGG+GGG | + | chr3.1:92961061-92961080 | None:intergenic | 45.0% | |
| GCAAGAGATTGGGGAAATGA+TGG | - | chr3.1:92961746-92961765 | MS.gene92749:CDS | 45.0% | |
| GCAGTTCATGAAAAAGGACC+TGG | - | chr3.1:92961638-92961657 | MS.gene92749:CDS | 45.0% | |
| GCTTAACAGTTCCACATGGT+GGG | - | chr3.1:92961281-92961300 | MS.gene92749:intron | 45.0% | |
| GGAATGGCAGAAGTCATTGT+TGG | + | chr3.1:92960906-92960925 | None:intergenic | 45.0% | |
| GGCAACTTACAAAGTGAAGG+AGG | - | chr3.1:92961304-92961323 | MS.gene92749:intron | 45.0% | |
| GGCAATGGATACAGCATCTT+CGG | + | chr3.1:92959129-92959148 | None:intergenic | 45.0% | |
| GTAGCCCATTGAGCAAATGT+GGG | + | chr3.1:92960161-92960180 | None:intergenic | 45.0% | |
| TCCATTATATCTGGTCCTGC+TGG | + | chr3.1:92959158-92959177 | None:intergenic | 45.0% | |
| TCTCAACCTATGCTCATTGG+TGG | - | chr3.1:92960735-92960754 | MS.gene92749:CDS | 45.0% | |
| TGTAGCCCATTGAGCAAATG+TGG | + | chr3.1:92960162-92960181 | None:intergenic | 45.0% | |
| TTAACAGTTCCACATGGTGG+GGG | - | chr3.1:92961283-92961302 | MS.gene92749:intron | 45.0% | |
| ! | AGACCATGAGCTTCTTTTGG+GGG | - | chr3.1:92961117-92961136 | MS.gene92749:intron | 45.0% |
| ! | AGGAGACCATGAGCTTCTTT+TGG | - | chr3.1:92961114-92961133 | MS.gene92749:intron | 45.0% |
| ! | CTAGAGATCTGGGAGCTTTT+GGG | + | chr3.1:92961433-92961452 | None:intergenic | 45.0% |
| ! | GAAAGTACGGACACTAAAGG+GGG | - | chr3.1:92960362-92960381 | MS.gene92749:intron | 45.0% |
| ! | GACTGTCCAATACCTTTTCC+AGG | + | chr3.1:92961659-92961678 | None:intergenic | 45.0% |
| ! | GAGACCATGAGCTTCTTTTG+GGG | - | chr3.1:92961116-92961135 | MS.gene92749:intron | 45.0% |
| ! | GGAGACCATGAGCTTCTTTT+GGG | - | chr3.1:92961115-92961134 | MS.gene92749:intron | 45.0% |
| ! | TAGAGATCTGGGAGCTTTTG+GGG | + | chr3.1:92961432-92961451 | None:intergenic | 45.0% |
| ! | TCTAGAGATCTGGGAGCTTT+TGG | + | chr3.1:92961434-92961453 | None:intergenic | 45.0% |
| ! | TTTTCTTTCTGTTTGGCGGC+CGG | + | chr3.1:92959282-92959301 | None:intergenic | 45.0% |
| !! | CTCAATGGGCTACAATAGCA+GGG | - | chr3.1:92960168-92960187 | MS.gene92749:intron | 45.0% |
| !! | GGGAAATGATGGGTGTAAGT+AGG | - | chr3.1:92961757-92961776 | MS.gene92749:CDS | 45.0% |
| !! | GGTGGATTAAACAGGCAGTT+CGG | - | chr3.1:92960753-92960772 | MS.gene92749:CDS | 45.0% |
| !! | TCAATGGGCTACAATAGCAG+GGG | - | chr3.1:92960169-92960188 | MS.gene92749:intron | 45.0% |
| !!! | TGTACGAACACGCTTTTTCC+TGG | + | chr3.1:92959372-92959391 | None:intergenic | 45.0% |
| AATGAGGATGAGGAGGACTG+CGG | + | chr3.1:92960950-92960969 | None:intergenic | 50.0% | |
| AGGTCAATGTCCCACCAATG+AGG | + | chr3.1:92960966-92960985 | None:intergenic | 50.0% | |
| AGTCTACTATCGCGGCATCA+TGG | - | chr3.1:92959544-92959563 | MS.gene92749:CDS | 50.0% | |
| ATGTCCCACCAATGAGGATG+AGG | + | chr3.1:92960960-92960979 | None:intergenic | 50.0% | |
| ATTGGTGTGCGTTTCTGACC+AGG | - | chr3.1:92961566-92961585 | MS.gene92749:CDS | 50.0% | |
| CAGGATCAGCAAGTACTTCC+TGG | + | chr3.1:92961587-92961606 | None:intergenic | 50.0% | |
| CCAGAAGAGTCAGAGCTTCT+GGG | - | chr3.1:92959303-92959322 | MS.gene92749:CDS | 50.0% | |
| CCAGCCCACATTTGCTCAAT+GGG | - | chr3.1:92960154-92960173 | MS.gene92749:intron | 50.0% | |
| GAAGAAGTTGCCGAAGCAAC+TGG | - | chr3.1:92961371-92961390 | MS.gene92749:intron | 50.0% | |
| GATGCTGTATCCATTGCCAC+TGG | - | chr3.1:92959131-92959150 | MS.gene92749:CDS | 50.0% | |
| GGCTTAACAGTTCCACATGG+TGG | - | chr3.1:92961280-92961299 | MS.gene92749:intron | 50.0% | |
| GGGGGCAACTTACAAAGTGA+AGG | - | chr3.1:92961301-92961320 | MS.gene92749:intron | 50.0% | |
| TCACATTAGCCCCAACCAAG+AGG | - | chr3.1:92959184-92959203 | MS.gene92749:CDS | 50.0% | |
| TCCTCCTCATCCTCATTGGT+GGG | - | chr3.1:92960953-92960972 | MS.gene92749:intron | 50.0% | |
| TCGGCAACTTCTTCATCGTC+AGG | + | chr3.1:92961365-92961384 | None:intergenic | 50.0% | |
| TGCCGTCACACTAACGATTG+TGG | + | chr3.1:92959638-92959657 | None:intergenic | 50.0% | |
| TGGGATGAGTCTGCAAGATC+TGG | - | chr3.1:92960304-92960323 | MS.gene92749:intron | 50.0% | |
| ! | AAGAGTCAGAGCTTCTGGGA+AGG | - | chr3.1:92959307-92959326 | MS.gene92749:CDS | 50.0% |
| ! | TCTTCGGCTGTTTCAGCTTC+AGG | + | chr3.1:92961606-92961625 | None:intergenic | 50.0% |
| !! | GCTCAATGGGCTACAATAGC+AGG | - | chr3.1:92960167-92960186 | MS.gene92749:intron | 50.0% |
| !!! | AACACGCTTTTTCCTGGTGG+TGG | + | chr3.1:92959366-92959385 | None:intergenic | 50.0% |
| !!! | ACGAACACGCTTTTTCCTGG+TGG | + | chr3.1:92959369-92959388 | None:intergenic | 50.0% |
| !!! | TGGGAGCTTTTGGGGTCAAA+AGG | + | chr3.1:92961424-92961443 | None:intergenic | 50.0% |
| AGGTCACCATCTCAGTCGTG+CGG | - | chr3.1:92961088-92961107 | MS.gene92749:intron | 55.0% | |
| CAACTGGGCTGTCGATGAAG+AGG | - | chr3.1:92961387-92961406 | MS.gene92749:intron | 55.0% | |
| CATCGACAGCCCAGTTGCTT+CGG | + | chr3.1:92961384-92961403 | None:intergenic | 55.0% | |
| CCCATTGAGCAAATGTGGGC+TGG | + | chr3.1:92960157-92960176 | None:intergenic | 55.0% | |
| GAGTCTGCAAGATCTGGTCC+AGG | - | chr3.1:92960310-92960329 | MS.gene92749:intron | 55.0% | |
| GCAGTCCTCCTCATCCTCAT+TGG | - | chr3.1:92960949-92960968 | MS.gene92749:intron | 55.0% | |
| GCCAGAAGAGTCAGAGCTTC+TGG | - | chr3.1:92959302-92959321 | MS.gene92749:CDS | 55.0% | |
| GCCAGCCCACATTTGCTCAA+TGG | - | chr3.1:92960153-92960172 | MS.gene92749:intron | 55.0% | |
| GTCCTCCTCATCCTCATTGG+TGG | - | chr3.1:92960952-92960971 | MS.gene92749:intron | 55.0% | |
| TCCCACCAATGAGGATGAGG+AGG | + | chr3.1:92960957-92960976 | None:intergenic | 55.0% | |
| TGTAAGTTGCCCCCACCATG+TGG | + | chr3.1:92961295-92961314 | None:intergenic | 55.0% | |
| ! | CCCAGAAGCTCTGACTCTTC+TGG | + | chr3.1:92959306-92959325 | None:intergenic | 55.0% |
| ! | GGCCGCCACATTTTTCTGCA+AGG | + | chr3.1:92960136-92960155 | None:intergenic | 55.0% |
| ! | TCAAGTCTGGTTCCACCACC+AGG | - | chr3.1:92959351-92959370 | MS.gene92749:CDS | 55.0% |
| !! | ACTAAAGGGGGCACCACACA+CGG | - | chr3.1:92960374-92960393 | MS.gene92749:intron | 55.0% |
| !! | GGTGGTGGAACCAGACTTGA+AGG | + | chr3.1:92959351-92959370 | None:intergenic | 55.0% |
| ATCTGGTCCTGCTGGTCCAG+TGG | + | chr3.1:92959150-92959169 | None:intergenic | 60.0% | |
| CCATCTCAGTCGTGCGGATG+AGG | - | chr3.1:92961094-92961113 | MS.gene92749:intron | 60.0% | |
| CCTCATCCGCACGACTGAGA+TGG | + | chr3.1:92961097-92961116 | None:intergenic | 60.0% | |
| CGGCCCCCAAAAGAAGCTCA+TGG | + | chr3.1:92961123-92961142 | None:intergenic | 60.0% | |
| CTGCACCTCTTACAAGCCCG+CGG | + | chr3.1:92960685-92960704 | None:intergenic | 60.0% | |
| GGGTTACAGGAAGGATGCCG+CGG | - | chr3.1:92960665-92960684 | MS.gene92749:CDS | 60.0% | |
| GGTTACAGGAAGGATGCCGC+GGG | - | chr3.1:92960666-92960685 | MS.gene92749:CDS | 60.0% | |
| TCCATTGCCACTGGACCAGC+AGG | - | chr3.1:92959140-92959159 | MS.gene92749:CDS | 60.0% | |
| TCCTGCTGGTCCAGTGGCAA+TGG | + | chr3.1:92959144-92959163 | None:intergenic | 60.0% | |
| GGATGCCGCGGGCTTGTAAG+AGG | - | chr3.1:92960677-92960696 | MS.gene92749:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 92959116 | 92961869 | 92959116 | ID=MS.gene92749 |
| chr3.1 | mRNA | 92959116 | 92961869 | 92959116 | ID=MS.gene92749.t1;Parent=MS.gene92749 |
| chr3.1 | exon | 92961489 | 92961869 | 92961489 | ID=MS.gene92749.t1.exon1;Parent=MS.gene92749.t1 |
| chr3.1 | CDS | 92961489 | 92961869 | 92961489 | ID=cds.MS.gene92749.t1;Parent=MS.gene92749.t1 |
| chr3.1 | exon | 92960654 | 92960884 | 92960654 | ID=MS.gene92749.t1.exon2;Parent=MS.gene92749.t1 |
| chr3.1 | CDS | 92960654 | 92960884 | 92960654 | ID=cds.MS.gene92749.t1;Parent=MS.gene92749.t1 |
| chr3.1 | exon | 92960171 | 92960311 | 92960171 | ID=MS.gene92749.t1.exon3;Parent=MS.gene92749.t1 |
| chr3.1 | CDS | 92960171 | 92960311 | 92960171 | ID=cds.MS.gene92749.t1;Parent=MS.gene92749.t1 |
| chr3.1 | exon | 92959495 | 92959695 | 92959495 | ID=MS.gene92749.t1.exon4;Parent=MS.gene92749.t1 |
| chr3.1 | CDS | 92959495 | 92959695 | 92959495 | ID=cds.MS.gene92749.t1;Parent=MS.gene92749.t1 |
| chr3.1 | exon | 92959116 | 92959397 | 92959116 | ID=MS.gene92749.t1.exon5;Parent=MS.gene92749.t1 |
| chr3.1 | CDS | 92959116 | 92959397 | 92959116 | ID=cds.MS.gene92749.t1;Parent=MS.gene92749.t1 |
| Gene Sequence |
| Protein sequence |
