AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71305

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71305.t1 MTR_3g082690 97.368 494 13 0 1 494 4 497 0.0 995
MS.gene71305.t1 MTR_6g023320 28.846 312 195 9 62 351 65 371 2.49e-26 112
MS.gene71305.t1 MTR_4g082305 27.451 459 288 19 40 475 37 473 3.23e-26 111
MS.gene71305.t1 MTR_1g115980 31.102 254 159 9 93 343 64 304 2.07e-22 99.0
MS.gene71305.t1 MTR_1g115980 31.102 254 159 9 93 343 64 304 2.60e-22 99.4
MS.gene71305.t1 MTR_1g115980 31.102 254 159 9 93 343 64 304 2.63e-22 99.4
MS.gene71305.t1 MTR_1g115980 31.102 254 159 9 93 343 64 304 2.86e-22 99.8
MS.gene71305.t1 MTR_1g115980 31.102 254 159 9 93 343 64 304 2.96e-22 99.8
MS.gene71305.t1 MTR_1g115980 31.102 254 159 9 93 343 64 304 3.11e-22 98.6
MS.gene71305.t1 MTR_4g128240 23.381 278 205 7 57 330 231 504 9.08e-18 86.7
MS.gene71305.t1 MTR_4g082305 31.579 228 140 9 40 265 37 250 5.74e-17 82.8
MS.gene71305.t1 MTR_1g077040 22.330 309 187 8 66 327 8 310 2.33e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71305.t1 AT3G07670 72.581 496 121 4 14 494 9 504 0.0 722
MS.gene71305.t1 AT3G07670 79.235 366 76 0 129 494 1 366 0.0 596
MS.gene71305.t1 AT5G14260 28.797 316 198 8 62 355 78 388 6.92e-30 121
MS.gene71305.t1 AT5G14260 28.797 316 198 8 62 355 78 388 1.89e-29 121
MS.gene71305.t1 AT5G14260 28.797 316 198 8 62 355 78 388 1.89e-29 121
MS.gene71305.t1 AT5G14260 28.797 316 198 8 62 355 78 388 1.89e-29 121
MS.gene71305.t1 AT1G14030 27.123 424 274 19 62 471 47 449 9.64e-25 107
MS.gene71305.t1 AT3G55080 29.091 330 192 13 30 343 11 314 2.32e-24 106
MS.gene71305.t1 AT3G55080 30.242 248 146 9 105 343 1 230 1.30e-21 97.1
MS.gene71305.t1 AT3G55080 30.242 248 146 9 105 343 1 230 1.30e-21 97.1
MS.gene71305.t1 AT3G55080 29.439 214 127 8 139 343 1 199 2.72e-18 86.7
MS.gene71305.t1 AT3G55080 29.224 219 126 9 139 343 1 204 2.72e-17 83.6
MS.gene71305.t1 AT2G18850 26.224 286 168 10 62 326 148 411 1.87e-16 82.4
MS.gene71305.t1 AT2G18850 26.224 286 168 10 62 326 148 411 2.10e-16 82.4

Find 113 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGAAGAAATCAGGGTATT+TGG 0.193374 3.2:-71637049 None:intergenic
GAAAGGACTAATAATGTTAT+TGG 0.198637 3.2:+71636843 MS.gene71305:CDS
AAAGGCTTGAAAATCTTTAA+TGG 0.210155 3.2:+71638685 MS.gene71305:CDS
TGGTTGGCCATTGGAGTTAA+TGG 0.222279 3.2:+71638055 MS.gene71305:CDS
TGAAAATCTTTAATGGGTTC+TGG 0.228182 3.2:+71638692 MS.gene71305:CDS
GTCTTCTGTTGAGTTGTTTC+GGG 0.232871 3.2:-71638466 None:intergenic
TTAGAACTGTTGAAGAAATA+TGG 0.237492 3.2:+71637915 MS.gene71305:CDS
CAGTTCTAACTTCTCCTTAT+AGG 0.242836 3.2:-71637901 None:intergenic
TTGAAGAAATATGGATTATC+AGG 0.251255 3.2:+71637924 MS.gene71305:CDS
AATGCTTGCTCCTCTATTTC+AGG 0.265403 3.2:-71638256 None:intergenic
AACCATACTCACTTCTTTAC+TGG 0.272010 3.2:+71635030 MS.gene71305:CDS
TGTGATGTAATTACCTCTTC+AGG 0.272230 3.2:-71637069 None:intergenic
TTCAATACTTCACCAGCTTC+CGG 0.274096 3.2:-71634900 None:intergenic
AAATAAAACTACCTCGAAAA+AGG 0.280033 3.2:+71638222 MS.gene71305:CDS
TTGTTGCTTTGAAGAATATT+AGG 0.281922 3.2:+71634251 MS.gene71305:CDS
TGAGACTAGCTTCACTTATA+AGG 0.286121 3.2:-71634962 None:intergenic
GTAGGTTCGGTTGCCCTCTA+TGG 0.292815 3.2:+71637362 MS.gene71305:intron
CTTGGATTCGTGCCCTCCTT+TGG 0.311412 3.2:-71637834 None:intergenic
ACAACCATGGTTGAAGCTTC+AGG 0.313304 3.2:+71633968 None:intergenic
AGTCTTCTGTTGAGTTGTTT+CGG 0.314214 3.2:-71638467 None:intergenic
ACACAGGTGTTTATTTCATA+TGG 0.317932 3.2:+71637768 MS.gene71305:intron
ACTTGGAAGCTTCACAGATT+AGG 0.329419 3.2:+71636808 MS.gene71305:CDS
ACCTCTTCAGGGAAGAAATC+AGG 0.336812 3.2:-71637057 None:intergenic
ATGAGGACTGGTGAATTAAA+AGG 0.337001 3.2:+71638667 MS.gene71305:CDS
AAGGAAGAGTTTACAGAATC+AGG 0.341934 3.2:-71634319 None:intergenic
CTTGGAAGCTTCACAGATTA+GGG 0.342197 3.2:+71636809 MS.gene71305:CDS
CTCTGCAACCTCATCATTGA+TGG 0.347009 3.2:+71634099 MS.gene71305:CDS
AAGGCTTGAAAATCTTTAAT+GGG 0.349585 3.2:+71638686 MS.gene71305:CDS
CAGATGGTTCAGTTATATAT+CGG 0.353139 3.2:+71634995 MS.gene71305:CDS
TACCTGCTCACCTGGTTGAT+AGG 0.356905 3.2:-71637579 None:intergenic
GAAAGAATGCATTGGTTCCT+TGG 0.361542 3.2:+71637388 MS.gene71305:CDS
ATTCATCTTCTCTTGAGAAA+TGG 0.363962 3.2:+71634161 MS.gene71305:CDS
AAAATACAACAAGTTCTTAC+AGG 0.366598 3.2:+71638315 MS.gene71305:CDS
GGCCAACCAGTAATCCTTAT+AGG 0.372376 3.2:-71638041 None:intergenic
GGTAAGTGGATCGCTAGATT+TGG 0.375776 3.2:+71638433 MS.gene71305:intron
TCAATACTTCACCAGCTTCC+GGG 0.387137 3.2:-71634899 None:intergenic
GAAATCCGATGAGTCCTATA+AGG 0.391559 3.2:+71637887 MS.gene71305:CDS
ATTGATGGAAACTATTCCTT+GGG 0.394039 3.2:+71634114 MS.gene71305:CDS
TCAGGAGTGATGACAAGTTC+AGG 0.394221 3.2:-71634301 None:intergenic
ATTCACAAAACAACACATCT+TGG 0.404622 3.2:+71634043 MS.gene71305:CDS
TACCAGTAAAGAAGTGAGTA+TGG 0.407176 3.2:-71635032 None:intergenic
GGGGAGCTTCTGTTATCATA+TGG 0.410226 3.2:+71637804 MS.gene71305:CDS
TGAATTGTTTGGTTAAAAGT+AGG 0.419376 3.2:-71634025 None:intergenic
CATTGATGGAAACTATTCCT+TGG 0.421613 3.2:+71634113 MS.gene71305:CDS
TCTCCAGATACAATGATATG+AGG 0.424444 3.2:+71637013 MS.gene71305:intron
AAAGAATGCATTGGTTCCTT+GGG 0.460470 3.2:+71637389 MS.gene71305:CDS
ACCAACATCAACTTTATCAA+TGG 0.460731 3.2:-71634218 None:intergenic
GTTGCAAGCAATGGCCAATC+CGG 0.468126 3.2:-71634936 None:intergenic
CAACCATGGTTGAAGCTTCA+GGG 0.470871 3.2:+71633969 None:intergenic
GAGTGGAGCTGCCCGGAAGC+TGG 0.475490 3.2:+71634888 MS.gene71305:CDS
GAGAAATGGTTGTCTCAGTC+AGG 0.477317 3.2:+71634175 MS.gene71305:CDS
AAGGATTACTGGTTGGCCAT+TGG 0.479274 3.2:+71638046 MS.gene71305:CDS
AGCAGAACTAGATCGCTACT+TGG 0.487105 3.2:+71636791 MS.gene71305:CDS
TCCCTATCAACCAGGTGAGC+AGG 0.488328 3.2:+71637577 MS.gene71305:CDS
CTTGAGATATCCTGAAATAG+AGG 0.493097 3.2:+71638246 MS.gene71305:CDS
GATTATGATAAATCGTCAAA+GGG 0.494942 3.2:+71637533 MS.gene71305:CDS
GAGTCCTTCAAATGGTCATT+CGG 0.496702 3.2:+71637175 MS.gene71305:CDS
TTCCTATAAGGATTACTGGT+TGG 0.499844 3.2:+71638039 MS.gene71305:CDS
CCCTGATTTCTTCCCTGAAG+AGG 0.501319 3.2:+71637056 MS.gene71305:CDS
AAAAGAATTCAGTTCCGGAT+TGG 0.504572 3.2:+71634922 MS.gene71305:CDS
ACCTGCTCACCTGGTTGATA+GGG 0.506098 3.2:-71637578 None:intergenic
GGATTATGATAAATCGTCAA+AGG 0.508301 3.2:+71637532 MS.gene71305:CDS
CGATATATAACTGAACCATC+TGG 0.510053 3.2:-71634994 None:intergenic
TGCATTCTTTCCATCCATAG+AGG 0.513905 3.2:-71637376 None:intergenic
GTGATGTAATTACCTCTTCA+GGG 0.518826 3.2:-71637068 None:intergenic
GAAGAAGACTGAGGGATATG+AGG 0.527158 3.2:+71638650 MS.gene71305:CDS
AATGCCGAATGACCATTTGA+AGG 0.527488 3.2:-71637179 None:intergenic
ATCATATGGATTTGTTCCAA+AGG 0.534845 3.2:+71637818 MS.gene71305:CDS
TTTATGATTACCTGCTCACC+TGG 0.538716 3.2:-71637587 None:intergenic
AGGAATAAGAGTGGTGGTGT+TGG 0.543116 3.2:-71634005 None:intergenic
CCTCTTCAGGGAAGAAATCA+GGG 0.543445 3.2:-71637056 None:intergenic
TTGATCGATCCACAGGTAAG+TGG 0.549849 3.2:+71638419 MS.gene71305:intron
GTTCGGTTGCCCTCTATGGA+TGG 0.550112 3.2:+71637366 MS.gene71305:CDS
AAAGTTGATGTTGGTGAGAG+AGG 0.560244 3.2:+71634226 MS.gene71305:CDS
TTATTAGGAGTGGAGCTGCC+CGG 0.560448 3.2:+71634881 MS.gene71305:intron
GACAACTCAACTGAATCACT+TGG 0.561180 3.2:-71637852 None:intergenic
TTCTGGAATCGTTTCCAATG+AGG 0.561253 3.2:+71638709 MS.gene71305:CDS
TCCATTGATAAAGTTGATGT+TGG 0.569634 3.2:+71634217 MS.gene71305:CDS
TCAACATCGAGTCCTTCAAA+TGG 0.570581 3.2:+71637167 MS.gene71305:CDS
TATGGATTTGTTCCAAAGGA+GGG 0.574263 3.2:+71637822 MS.gene71305:CDS
TCAATGGACATCTTCTGAGA+AGG 0.574688 3.2:-71634202 None:intergenic
GCATAAGCCATTAACTCCAA+TGG 0.580262 3.2:-71638062 None:intergenic
ATAAGGTAAGTTGCAAGCAA+TGG 0.582668 3.2:-71634945 None:intergenic
CTCCAGATACAATGATATGA+GGG 0.583933 3.2:+71637014 MS.gene71305:intron
GTCTCATGAAATCTTCCAGA+TGG 0.584762 3.2:+71634979 MS.gene71305:CDS
AGACTGAGGGATATGAGGAC+TGG 0.586138 3.2:+71638655 MS.gene71305:CDS
ATATGGATTTGTTCCAAAGG+AGG 0.589672 3.2:+71637821 MS.gene71305:CDS
GCATTCTTTCCATCCATAGA+GGG 0.590910 3.2:-71637375 None:intergenic
CTTCTCCTTATAGGACTCAT+CGG 0.591036 3.2:-71637892 None:intergenic
GTTAAAAGTAGGAATAAGAG+TGG 0.593264 3.2:-71634014 None:intergenic
TGAAGAAATATGGATTATCA+GGG 0.595613 3.2:+71637925 MS.gene71305:CDS
AATAGTTTCCATCAATGATG+AGG 0.598821 3.2:-71634107 None:intergenic
CTTTCTAAAGCAGCTAGCCG+TGG 0.603623 3.2:+71638490 MS.gene71305:CDS
GCTTTGAAGAATATTAGGAA+AGG 0.605109 3.2:+71634256 MS.gene71305:CDS
TTAGGGAGAGAGCAATTGAA+AGG 0.606641 3.2:+71636826 MS.gene71305:CDS
CATCCCTGAAGCTTCAACCA+TGG 0.608019 3.2:-71633972 None:intergenic
TATGGATGGAAAGAATGCAT+TGG 0.613912 3.2:+71637380 MS.gene71305:CDS
GTTAGTCCTTCAAGCATGAG+AGG 0.621487 3.2:+71638095 MS.gene71305:CDS
CATGAGAGGAAAATTTGAAG+AGG 0.626190 3.2:+71638109 MS.gene71305:CDS
GATATTGCGAAGAAGACTGA+GGG 0.640825 3.2:+71638642 MS.gene71305:intron
TATGATGAATCATAGTTGTG+AGG 0.641745 3.2:+71637416 MS.gene71305:CDS
TGATTCATCATATCTGCCCA+AGG 0.643752 3.2:-71637405 None:intergenic
ACTTGTGTAATAGCGAGCGC+AGG 0.651320 3.2:+71638513 MS.gene71305:CDS
AGAAGTGAGTATGGTTGACG+AGG 0.657046 3.2:-71635023 None:intergenic
GAATCATTCTCACATCCCCA+AGG 0.662703 3.2:-71634130 None:intergenic
ACGGATCGTCCCTATCAACC+AGG 0.664539 3.2:+71637569 MS.gene71305:CDS
AAAAGTAGGAATAAGAGTGG+TGG 0.668503 3.2:-71634011 None:intergenic
TCTTCTGTTGAGTTGTTTCG+GGG 0.672386 3.2:-71638465 None:intergenic
AGATATTGCGAAGAAGACTG+AGG 0.673237 3.2:+71638641 MS.gene71305:intron
TTGATGGAAACTATTCCTTG+GGG 0.675898 3.2:+71634115 MS.gene71305:CDS
AAAGGGAATTGTCTTTACGA+CGG 0.683033 3.2:+71637550 MS.gene71305:CDS
GGAGTGATGACAAGTTCAGG+AGG 0.684706 3.2:-71634298 None:intergenic
CTCGCTATTACACAAGTCCA+CGG 0.710247 3.2:-71638507 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAAAAAAAAAACTAAAA+AGG - chr3.2:71635921-71635940 None:intergenic 10.0%
!! ATTGAATTAATAAACTAAAA+TGG - chr3.2:71634673-71634692 None:intergenic 10.0%
!! TATTGAAATTATAGTTTAAA+AGG - chr3.2:71635970-71635989 None:intergenic 10.0%
!! ATAACATTTCTCATAAAAAA+AGG + chr3.2:71636717-71636736 MS.gene71305:intron 15.0%
!! ATTTCAATAGAAAAAACTAA+AGG + chr3.2:71635981-71636000 MS.gene71305:intron 15.0%
!! TAACATTTCTCATAAAAAAA+GGG + chr3.2:71636718-71636737 MS.gene71305:intron 15.0%
!! TCTAGAAAATTATTAAGATT+TGG + chr3.2:71636570-71636589 MS.gene71305:intron 15.0%
!!! ATTATTTTGTGTGTTTATAT+TGG + chr3.2:71635081-71635100 MS.gene71305:intron 15.0%
!!! ATTTGTTAAATTAGATACAT+AGG + chr3.2:71637620-71637639 MS.gene71305:intron 15.0%
!!! TATTTAATTTCTACTTACAA+AGG + chr3.2:71638577-71638596 MS.gene71305:intron 15.0%
!!! TCTAATATATTTTTTGTCAT+TGG + chr3.2:71637490-71637509 MS.gene71305:intron 15.0%
!!! TTATTTTGTGTGTTTATATT+GGG + chr3.2:71635082-71635101 MS.gene71305:intron 15.0%
!!! TTCGGTTTTTTTTTTTTTTT+TGG - chr3.2:71635406-71635425 None:intergenic 15.0%
!!! TTTAAAAGGCTTTTTTTTTT+TGG - chr3.2:71635956-71635975 None:intergenic 15.0%
!!! TTTTTTTTTTGGTAACAAAA+GGG - chr3.2:71635945-71635964 None:intergenic 15.0%
!!! TTTTTTTTTTTGGTAACAAA+AGG - chr3.2:71635946-71635965 None:intergenic 15.0%
!! AAAAAATCTGCAGAAATATT+AGG - chr3.2:71636892-71636911 None:intergenic 20.0%
!! AAATATTAGGTACAAATGAT+CGG - chr3.2:71636879-71636898 None:intergenic 20.0%
!! ACGTAAATAGTAGTTATAAA+CGG - chr3.2:71636254-71636273 None:intergenic 20.0%
!! ATGAAAGAAATAAACTGTAT+AGG - chr3.2:71636760-71636779 None:intergenic 20.0%
!! GAACATATAATTCATGATAT+TGG + chr3.2:71637333-71637352 MS.gene71305:intron 20.0%
!! GAATTAATAAACTAAAATGG+TGG - chr3.2:71634670-71634689 None:intergenic 20.0%
!! TAATGATTTCAAAAGCAATT+TGG + chr3.2:71638354-71638373 MS.gene71305:intron 20.0%
!! TCATATGGAAAAAAATCAAA+CGG + chr3.2:71637783-71637802 MS.gene71305:CDS 20.0%
!! TTATATAAGTATTATGCTGT+CGG + chr3.2:71634733-71634752 MS.gene71305:intron 20.0%
!!! AATATTTCTGCAGATTTTTT+AGG + chr3.2:71636892-71636911 MS.gene71305:intron 20.0%
!!! ACTTGTTTGATTTAATCTAT+TGG + chr3.2:71634443-71634462 MS.gene71305:intron 20.0%
!!! ATATTTTTTGTCATTGGATT+AGG + chr3.2:71637496-71637515 MS.gene71305:intron 20.0%
!!! TATTTTACAATAATTCACCA+GGG + chr3.2:71635207-71635226 MS.gene71305:intron 20.0%
!!! TTATACTTGCTATTTTCTTT+TGG + chr3.2:71636008-71636027 MS.gene71305:intron 20.0%
!!! TTTTATTTTATTTTGACCCA+CGG - chr3.2:71636531-71636550 None:intergenic 20.0%
! AAAAAGGAACCTGTATTAAA+AGG - chr3.2:71635503-71635522 None:intergenic 25.0%
! AAAATACAACAAGTTCTTAC+AGG + chr3.2:71638315-71638334 MS.gene71305:CDS 25.0%
! AAAGGCTTGAAAATCTTTAA+TGG + chr3.2:71638685-71638704 MS.gene71305:CDS 25.0%
! AAATAAAACTACCTCGAAAA+AGG + chr3.2:71638222-71638241 MS.gene71305:CDS 25.0%
! AAGATGAAATAGTACCAATA+CGG + chr3.2:71636655-71636674 MS.gene71305:intron 25.0%
! AAGGCTTGAAAATCTTTAAT+GGG + chr3.2:71638686-71638705 MS.gene71305:CDS 25.0%
! AATAATGTTATTGGAACGTA+TGG + chr3.2:71636852-71636871 MS.gene71305:intron 25.0%
! AATCAACAACTATTTGACAA+CGG + chr3.2:71636217-71636236 MS.gene71305:intron 25.0%
! AATTAAGAGGAAGAAATTAG+TGG - chr3.2:71636112-71636131 None:intergenic 25.0%
! AATTTGCATTTCATTTACCA+AGG - chr3.2:71637662-71637681 None:intergenic 25.0%
! ACAAATAAAGAGAAGAAGAA+AGG - chr3.2:71634341-71634360 None:intergenic 25.0%
! ATATCCAAATCAAGTTTAGA+AGG - chr3.2:71634820-71634839 None:intergenic 25.0%
! ATATGGAAAAAAATCAAACG+GGG + chr3.2:71637785-71637804 MS.gene71305:CDS 25.0%
! ATGTTATGTTGACAACTTTA+TGG - chr3.2:71636704-71636723 None:intergenic 25.0%
! ATTAAGAGGAAGAAATTAGT+GGG - chr3.2:71636111-71636130 None:intergenic 25.0%
! ATTGAAAAAGAATTCAGTTC+CGG + chr3.2:71634917-71634936 MS.gene71305:CDS 25.0%
! CAAATATGGAAATTTAGTCA+TGG + chr3.2:71635691-71635710 MS.gene71305:intron 25.0%
! CATATGGAAAAAAATCAAAC+GGG + chr3.2:71637784-71637803 MS.gene71305:CDS 25.0%
! GAAAGGACTAATAATGTTAT+TGG + chr3.2:71636843-71636862 MS.gene71305:CDS 25.0%
! GATTATGATAAATCGTCAAA+GGG + chr3.2:71637533-71637552 MS.gene71305:CDS 25.0%
! GTAACAAGTTTAATCATGAA+AGG - chr3.2:71637980-71637999 None:intergenic 25.0%
! TAATTTATGGAAACAGCTTA+TGG + chr3.2:71634491-71634510 MS.gene71305:intron 25.0%
! TCAATAGAAAAAACTAAAGG+TGG + chr3.2:71635984-71636003 MS.gene71305:intron 25.0%
! TGAATTGTTTGGTTAAAAGT+AGG - chr3.2:71634028-71634047 None:intergenic 25.0%
! TGAGACTATGAGATAATTTA+TGG + chr3.2:71634478-71634497 MS.gene71305:intron 25.0%
! TGCTAGTTATTGAAAAACAT+GGG - chr3.2:71636979-71636998 None:intergenic 25.0%
! TGTTTCATATTTGAGAGAAA+TGG + chr3.2:71637300-71637319 MS.gene71305:intron 25.0%
! TTAGAACTGTTGAAGAAATA+TGG + chr3.2:71637915-71637934 MS.gene71305:CDS 25.0%
! TTGAATGTTCATCACAAATA+TGG + chr3.2:71635677-71635696 MS.gene71305:intron 25.0%
! TTGCTAGTTATTGAAAAACA+TGG - chr3.2:71636980-71636999 None:intergenic 25.0%
! TTTCTTGTATCAAATTACAC+AGG + chr3.2:71637752-71637771 MS.gene71305:intron 25.0%
!! ATCTGAATCTGTTATTTGTA+TGG + chr3.2:71637133-71637152 MS.gene71305:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr3.2:71634617-71634636 MS.gene71305:intron 25.0%
!! CAGTTTATTTCTTTCATTTC+AGG + chr3.2:71636763-71636782 MS.gene71305:intron 25.0%
!! CTATTTTACAATAATTCACC+AGG + chr3.2:71635206-71635225 MS.gene71305:intron 25.0%
!! TATAACAAGCCTTTTAATAC+AGG + chr3.2:71635491-71635510 MS.gene71305:intron 25.0%
!! TGAAGAAATATGGATTATCA+GGG + chr3.2:71637925-71637944 MS.gene71305:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr3.2:71634618-71634637 MS.gene71305:intron 25.0%
!! TTGAAGAAATATGGATTATC+AGG + chr3.2:71637924-71637943 MS.gene71305:CDS 25.0%
!! TTTCTTCTTCTCTTTATTTG+TGG + chr3.2:71634340-71634359 MS.gene71305:intron 25.0%
!!! ATTAAGCATCAATTTTAGCA+TGG - chr3.2:71634791-71634810 None:intergenic 25.0%
!!! TGGTGTTTATGATTTTGTTT+GGG + chr3.2:71634849-71634868 MS.gene71305:intron 25.0%
!!! TTGTTGCTTTGAAGAATATT+AGG + chr3.2:71634251-71634270 MS.gene71305:CDS 25.0%
!!! TTTATTTTATTTTGACCCAC+GGG - chr3.2:71636530-71636549 None:intergenic 25.0%
AAGAAATCAATTGCAGTTTG+TGG - chr3.2:71637732-71637751 None:intergenic 30.0%
AATAGTTTCCATCAATGATG+AGG - chr3.2:71634110-71634129 None:intergenic 30.0%
AATATAAGCCCATCCTAAAA+TGG + chr3.2:71635433-71635452 MS.gene71305:intron 30.0%
AATTTCTGAACAAAGCTTCT+TGG - chr3.2:71634696-71634715 None:intergenic 30.0%
ACACAGGTGTTTATTTCATA+TGG + chr3.2:71637768-71637787 MS.gene71305:intron 30.0%
ACCAACATCAACTTTATCAA+TGG - chr3.2:71634221-71634240 None:intergenic 30.0%
ATTCACAAAACAACACATCT+TGG + chr3.2:71634043-71634062 MS.gene71305:CDS 30.0%
ATTCATCTTCTCTTGAGAAA+TGG + chr3.2:71634161-71634180 MS.gene71305:CDS 30.0%
ATTGATGGAAACTATTCCTT+GGG + chr3.2:71634114-71634133 MS.gene71305:CDS 30.0%
ATTGTATCTGGAGAACAAAT+GGG - chr3.2:71637007-71637026 None:intergenic 30.0%
CAGATGGTTCAGTTATATAT+CGG + chr3.2:71634995-71635014 MS.gene71305:CDS 30.0%
CCAAGCAAAAAAATCTTCAA+TGG + chr3.2:71636138-71636157 MS.gene71305:intron 30.0%
CGACAAACCTATCAAAATAA+GGG + chr3.2:71636394-71636413 MS.gene71305:intron 30.0%
GAATTCACAAAGATAGTAAG+TGG - chr3.2:71638139-71638158 None:intergenic 30.0%
GGATTATGATAAATCGTCAA+AGG + chr3.2:71637532-71637551 MS.gene71305:CDS 30.0%
GTAATTACATCACATTGAAC+AGG + chr3.2:71637078-71637097 MS.gene71305:intron 30.0%
GTGTTTATATTGGGAAGAAT+TGG + chr3.2:71635091-71635110 MS.gene71305:intron 30.0%
GTTAAAAGTAGGAATAAGAG+TGG - chr3.2:71634017-71634036 None:intergenic 30.0%
TAACCAAATGTGTGATTCTT+TGG + chr3.2:71638178-71638197 MS.gene71305:intron 30.0%
TATGATGAATCATAGTTGTG+AGG + chr3.2:71637416-71637435 MS.gene71305:CDS 30.0%
TCAACCTTCTAAACTTGATT+TGG + chr3.2:71634813-71634832 MS.gene71305:intron 30.0%
! AATGAAAAAGTGTGTCTCTT+AGG + chr3.2:71636465-71636484 MS.gene71305:intron 30.0%
! ATCATATGGATTTGTTCCAA+AGG + chr3.2:71637818-71637837 MS.gene71305:CDS 30.0%
! CTGGTGTTTATGATTTTGTT+TGG + chr3.2:71634848-71634867 MS.gene71305:intron 30.0%
! GATGAACATTCAAATCCTTT+TGG - chr3.2:71635670-71635689 None:intergenic 30.0%
! TGTTTTCCTATAAGGATTAC+TGG + chr3.2:71638035-71638054 MS.gene71305:CDS 30.0%
!! AAACTTGTTCTTTTCTATCC+AGG - chr3.2:71636340-71636359 None:intergenic 30.0%
!! ACTTTTGTACCATTTTAGGA+TGG - chr3.2:71635445-71635464 None:intergenic 30.0%
!! ATAGCTTTGAAAACAGCTTA+TGG + chr3.2:71634416-71634435 MS.gene71305:intron 30.0%
!! CTTCACTTTTGTACCATTTT+AGG - chr3.2:71635449-71635468 None:intergenic 30.0%
!! CTTTAGAGTCATAAACACTT+TGG - chr3.2:71637697-71637716 None:intergenic 30.0%
!! GCTTTGAAGAATATTAGGAA+AGG + chr3.2:71634256-71634275 MS.gene71305:CDS 30.0%
!! GGTGTTTATGATTTTGTTTG+GGG + chr3.2:71634850-71634869 MS.gene71305:intron 30.0%
!! TATTAGAGTTCAACTTGTTG+AGG - chr3.2:71637477-71637496 None:intergenic 30.0%
!! TCCATTGATAAAGTTGATGT+TGG + chr3.2:71634217-71634236 MS.gene71305:CDS 30.0%
!! TGAAAATCTTTAATGGGTTC+TGG + chr3.2:71638692-71638711 MS.gene71305:CDS 30.0%
!! TGATTTTGTTTGGGGTATTT+TGG + chr3.2:71634858-71634877 MS.gene71305:intron 30.0%
!!! AACTTGCTAGGGATTTTATT+TGG - chr3.2:71637452-71637471 None:intergenic 30.0%
!!! AGCTGATTTTCTAGCTAAAA+AGG + chr3.2:71635784-71635803 MS.gene71305:intron 30.0%
!!! ATTCACCAGGGTTTTAAAAA+AGG + chr3.2:71635219-71635238 MS.gene71305:intron 30.0%
!!! CCATTGAAGATTTTTTTGCT+TGG - chr3.2:71636141-71636160 None:intergenic 30.0%
!!! CTTTTGTACCATTTTAGGAT+GGG - chr3.2:71635444-71635463 None:intergenic 30.0%
!!! GCTGATTTTCTAGCTAAAAA+GGG + chr3.2:71635785-71635804 MS.gene71305:intron 30.0%
!!! GTGTTGTTTTGTGAATTGTT+TGG - chr3.2:71634039-71634058 None:intergenic 30.0%
!!! TTTGGGGTATTTTGGTTATT+AGG + chr3.2:71634866-71634885 MS.gene71305:intron 30.0%
!!! TTTTTTGTCATTGGATTAGG+TGG + chr3.2:71637499-71637518 MS.gene71305:intron 30.0%
!!! TTTTTTTGGAGTGACATTCA+GGG - chr3.2:71635392-71635411 None:intergenic 30.0%
!!! TTTTTTTTGGAGTGACATTC+AGG - chr3.2:71635393-71635412 None:intergenic 30.0%
AAAAGAATTCAGTTCCGGAT+TGG + chr3.2:71634922-71634941 MS.gene71305:CDS 35.0%
AAAAGGATCGAAGTAACAGT+TGG + chr3.2:71635236-71635255 MS.gene71305:intron 35.0%
AAAAGTAGGAATAAGAGTGG+TGG - chr3.2:71634014-71634033 None:intergenic 35.0%
AAAGGGAATTGTCTTTACGA+CGG + chr3.2:71637550-71637569 MS.gene71305:CDS 35.0%
AACCATACTCACTTCTTTAC+TGG + chr3.2:71635030-71635049 MS.gene71305:CDS 35.0%
AACCCTCATATCATTGTATC+TGG - chr3.2:71637019-71637038 None:intergenic 35.0%
AACTAAAAAGGACCCATACT+AGG - chr3.2:71635909-71635928 None:intergenic 35.0%
AAGGAAGAGTTTACAGAATC+AGG - chr3.2:71634322-71634341 None:intergenic 35.0%
ACCAATACGGTATCTTTAGA+CGG + chr3.2:71636668-71636687 MS.gene71305:intron 35.0%
ACCTATCAAAATAAGGGTTC+CGG + chr3.2:71636400-71636419 MS.gene71305:intron 35.0%
ACTAAAAAGGACCCATACTA+GGG - chr3.2:71635908-71635927 None:intergenic 35.0%
AGCGACAAACTTGTGAAAAT+AGG + chr3.2:71636363-71636382 MS.gene71305:intron 35.0%
ATAAACCCAAAATCTCAGCA+TGG - chr3.2:71635565-71635584 None:intergenic 35.0%
ATAAGGTAAGTTGCAAGCAA+TGG - chr3.2:71634948-71634967 None:intergenic 35.0%
ATGAATCATAGTTGTGAGGT+AGG + chr3.2:71637420-71637439 MS.gene71305:intron 35.0%
CAGGTAATCATAAACTCAGA+TGG + chr3.2:71637596-71637615 MS.gene71305:intron 35.0%
CATGAGAGGAAAATTTGAAG+AGG + chr3.2:71638109-71638128 MS.gene71305:CDS 35.0%
CATTGATGGAAACTATTCCT+TGG + chr3.2:71634113-71634132 MS.gene71305:CDS 35.0%
CATTGTATCTGGAGAACAAA+TGG - chr3.2:71637008-71637027 None:intergenic 35.0%
CGATATATAACTGAACCATC+TGG - chr3.2:71634997-71635016 None:intergenic 35.0%
CTATCTATGCACTATGCTTA+TGG - chr3.2:71634522-71634541 None:intergenic 35.0%
CTCCAGATACAATGATATGA+GGG + chr3.2:71637014-71637033 MS.gene71305:intron 35.0%
CTTATGCATGCTTATGCTAT+AGG + chr3.2:71634588-71634607 MS.gene71305:intron 35.0%
CTTGAGATATCCTGAAATAG+AGG + chr3.2:71638246-71638265 MS.gene71305:CDS 35.0%
GAAAGAAATAACAAACCCGT+GGG + chr3.2:71636512-71636531 MS.gene71305:intron 35.0%
GATAAGACAGTTAAGTACCT+TGG + chr3.2:71637642-71637661 MS.gene71305:intron 35.0%
GATTTGGATATCTTGTGTTC+TGG + chr3.2:71634829-71634848 MS.gene71305:intron 35.0%
GCGACAAACCTATCAAAATA+AGG + chr3.2:71636393-71636412 MS.gene71305:intron 35.0%
GCGACAAACTTGTGAAAATA+GGG + chr3.2:71636364-71636383 MS.gene71305:intron 35.0%
GGGCTTATATTAGTGACATT+CGG - chr3.2:71635424-71635443 None:intergenic 35.0%
GTGATGTAATTACCTCTTCA+GGG - chr3.2:71637071-71637090 None:intergenic 35.0%
TACCAGTAAAGAAGTGAGTA+TGG - chr3.2:71635035-71635054 None:intergenic 35.0%
TATAGGAAAACACTGAGATC+TGG - chr3.2:71638027-71638046 None:intergenic 35.0%
TATGGATGGAAAGAATGCAT+TGG + chr3.2:71637380-71637399 MS.gene71305:CDS 35.0%
TCAAATGGAAACAAACAGCT+AGG - chr3.2:71638403-71638422 None:intergenic 35.0%
TCCAAAGAAACCATGCAAAA+AGG - chr3.2:71635519-71635538 None:intergenic 35.0%
TCTCCAGATACAATGATATG+AGG + chr3.2:71637013-71637032 MS.gene71305:intron 35.0%
TCTTGTACGGATATAGATGA+AGG - chr3.2:71636047-71636066 None:intergenic 35.0%
TGAAAGAAATAACAAACCCG+TGG + chr3.2:71636511-71636530 MS.gene71305:intron 35.0%
TGAATCATAGTTGTGAGGTA+GGG + chr3.2:71637421-71637440 MS.gene71305:intron 35.0%
TGCTTGGAACTGAAATTAAG+AGG - chr3.2:71636125-71636144 None:intergenic 35.0%
TGTCCAAAGAATCACACATT+TGG - chr3.2:71638184-71638203 None:intergenic 35.0%
TGTGATGTAATTACCTCTTC+AGG - chr3.2:71637072-71637091 None:intergenic 35.0%
TTCCTATAAGGATTACTGGT+TGG + chr3.2:71638039-71638058 MS.gene71305:CDS 35.0%
TTGATGGAAACTATTCCTTG+GGG + chr3.2:71634115-71634134 MS.gene71305:CDS 35.0%
! AAATGCTTTGTTACCTTGCT+AGG + chr3.2:71635156-71635175 MS.gene71305:intron 35.0%
! AATACAGGTTCCTTTTTGCA+TGG + chr3.2:71635506-71635525 MS.gene71305:intron 35.0%
! AATGCTTTGTTACCTTGCTA+GGG + chr3.2:71635157-71635176 MS.gene71305:intron 35.0%
! AATTTTCCTCTCATGCTTGA+AGG - chr3.2:71638104-71638123 None:intergenic 35.0%
! AGTCTTCTGTTGAGTTGTTT+CGG - chr3.2:71638470-71638489 None:intergenic 35.0%
! ATATGGATTTGTTCCAAAGG+AGG + chr3.2:71637821-71637840 MS.gene71305:CDS 35.0%
! ATGAGGACTGGTGAATTAAA+AGG + chr3.2:71638667-71638686 MS.gene71305:CDS 35.0%
! CAAGAAAGCACAGTAGATTA+AGG - chr3.2:71636946-71636965 None:intergenic 35.0%
! CAGTTCTAACTTCTCCTTAT+AGG - chr3.2:71637904-71637923 None:intergenic 35.0%
! CATTCAAATCCTTTTGGATG+AGG - chr3.2:71635664-71635683 None:intergenic 35.0%
! CGAGATTTTCTCTCAATTTC+TGG - chr3.2:71636432-71636451 None:intergenic 35.0%
! CTGTTATTTGTATGGCTTTC+AGG + chr3.2:71637141-71637160 MS.gene71305:intron 35.0%
! GATCTCAGTGTTTTCCTATA+AGG + chr3.2:71638027-71638046 MS.gene71305:intron 35.0%
! TATGGATTTGTTCCAAAGGA+GGG + chr3.2:71637822-71637841 MS.gene71305:CDS 35.0%
! TCCTTTTTGCATGGTTTCTT+TGG + chr3.2:71635515-71635534 MS.gene71305:intron 35.0%
!! AAAGAATGCATTGGTTCCTT+GGG + chr3.2:71637389-71637408 MS.gene71305:CDS 35.0%
!! ATATCTCAAGTCCTTTTTCG+AGG - chr3.2:71638236-71638255 None:intergenic 35.0%
!! ATTAGCTGTTTCTCTGATGT+AGG - chr3.2:71636632-71636651 None:intergenic 35.0%
!! GATTTTCTCTCAATTTCTGG+TGG - chr3.2:71636429-71636448 None:intergenic 35.0%
!! TGAGACTAGCTTCACTTATA+AGG - chr3.2:71634965-71634984 None:intergenic 35.0%
!! TTGTTGAGGAAAACTTGCTA+GGG - chr3.2:71637463-71637482 None:intergenic 35.0%
!!! CGAGGTAGTTTTATTTGATG+CGG - chr3.2:71638218-71638237 None:intergenic 35.0%
!!! GAGATTTTGGGTTTATACCA+TGG + chr3.2:71635569-71635588 MS.gene71305:intron 35.0%
!!! GGTATTTTGGTTATTAGGAG+TGG + chr3.2:71634871-71634890 MS.gene71305:intron 35.0%
!!! TCGATCCTTTTTTAAAACCC+TGG - chr3.2:71635227-71635246 None:intergenic 35.0%
AACACCTTCTTCGTAGAGAT+TGG + chr3.2:71635720-71635739 MS.gene71305:intron 40.0%
AAGAGGATAGAGGTCATATC+AGG - chr3.2:71635854-71635873 None:intergenic 40.0%
AATGCCGAATGACCATTTGA+AGG - chr3.2:71637182-71637201 None:intergenic 40.0%
AATGCTTGCTCCTCTATTTC+AGG - chr3.2:71638259-71638278 None:intergenic 40.0%
ACAACAAGTTCTTACAGGCA+AGG + chr3.2:71638320-71638339 MS.gene71305:intron 40.0%
ACACCTTCTTCGTAGAGATT+GGG + chr3.2:71635721-71635740 MS.gene71305:intron 40.0%
ACCGTCTAAAGATACCGTAT+TGG - chr3.2:71636672-71636691 None:intergenic 40.0%
ACTTGGAAGCTTCACAGATT+AGG + chr3.2:71636808-71636827 MS.gene71305:CDS 40.0%
AGAGAAACACCTCTCTTGTA+CGG - chr3.2:71636060-71636079 None:intergenic 40.0%
AGATATTGCGAAGAAGACTG+AGG + chr3.2:71638641-71638660 MS.gene71305:intron 40.0%
CATCTATATCCGTACAAGAG+AGG + chr3.2:71636048-71636067 MS.gene71305:intron 40.0%
CTGCATTCTCTGCAATATCA+AGG - chr3.2:71635274-71635293 None:intergenic 40.0%
CTTCTCCTTATAGGACTCAT+CGG - chr3.2:71637895-71637914 None:intergenic 40.0%
CTTGGAAGCTTCACAGATTA+GGG + chr3.2:71636809-71636828 MS.gene71305:CDS 40.0%
GAAATCCGATGAGTCCTATA+AGG + chr3.2:71637887-71637906 MS.gene71305:CDS 40.0%
GACAACTCAACTGAATCACT+TGG - chr3.2:71637855-71637874 None:intergenic 40.0%
GAGTCATAAACACTTTGGCA+AGG - chr3.2:71637692-71637711 None:intergenic 40.0%
GAGTCCTTCAAATGGTCATT+CGG + chr3.2:71637175-71637194 MS.gene71305:CDS 40.0%
GATATTGCGAAGAAGACTGA+GGG + chr3.2:71638642-71638661 MS.gene71305:intron 40.0%
GCATAAGCCATTAACTCCAA+TGG - chr3.2:71638065-71638084 None:intergenic 40.0%
GCATTCTTTCCATCCATAGA+GGG - chr3.2:71637378-71637397 None:intergenic 40.0%
GGATACTGGATTTAAGCATG+TGG + chr3.2:71635607-71635626 MS.gene71305:intron 40.0%
GTCTCATGAAATCTTCCAGA+TGG + chr3.2:71634979-71634998 MS.gene71305:CDS 40.0%
TCAACATCGAGTCCTTCAAA+TGG + chr3.2:71637167-71637186 MS.gene71305:CDS 40.0%
TCGTCACATAACTGTCTATG+AGG - chr3.2:71634644-71634663 None:intergenic 40.0%
TGATTCATCATATCTGCCCA+AGG - chr3.2:71637408-71637427 None:intergenic 40.0%
TGCATTCTTTCCATCCATAG+AGG - chr3.2:71637379-71637398 None:intergenic 40.0%
TGTGTGATTCTTTGGACAGA+TGG + chr3.2:71638186-71638205 MS.gene71305:intron 40.0%
TGTTGTTGACCTCATCCAAA+AGG + chr3.2:71635652-71635671 MS.gene71305:intron 40.0%
TTACCTGTGGATCGATCAAA+TGG - chr3.2:71638418-71638437 None:intergenic 40.0%
TTACGACATACTTTGCGTGA+GGG + chr3.2:71635752-71635771 MS.gene71305:intron 40.0%
TTACGTGACTATGAGAGAGA+GGG + chr3.2:71636268-71636287 MS.gene71305:intron 40.0%
TTAGGGAGAGAGCAATTGAA+AGG + chr3.2:71636826-71636845 MS.gene71305:CDS 40.0%
TTCAATACTTCACCAGCTTC+CGG - chr3.2:71634903-71634922 None:intergenic 40.0%
TTGAAGTTGTGTTGGGATAC+TGG + chr3.2:71635593-71635612 MS.gene71305:intron 40.0%
TTTACGACATACTTTGCGTG+AGG + chr3.2:71635751-71635770 MS.gene71305:intron 40.0%
TTTACGTGACTATGAGAGAG+AGG + chr3.2:71636267-71636286 MS.gene71305:intron 40.0%
TTTATGATTACCTGCTCACC+TGG - chr3.2:71637590-71637609 None:intergenic 40.0%
TTTCCATTTGATCGATCCAC+AGG + chr3.2:71638412-71638431 MS.gene71305:intron 40.0%
! ACCATGGTTTGAAGTTGTGT+TGG + chr3.2:71635585-71635604 MS.gene71305:intron 40.0%
! AGGGAAGAAATCAGGGTATT+TGG - chr3.2:71637052-71637071 None:intergenic 40.0%
! AGTTTGTTCGACCCTAGTAT+GGG + chr3.2:71635894-71635913 MS.gene71305:intron 40.0%
! ATCCTCCATGCTGAGATTTT+GGG + chr3.2:71635557-71635576 MS.gene71305:intron 40.0%
! CCATGGTTTGAAGTTGTGTT+GGG + chr3.2:71635586-71635605 MS.gene71305:intron 40.0%
! CTTGTTGAGGAAAACTTGCT+AGG - chr3.2:71637464-71637483 None:intergenic 40.0%
! GTCTTCTGTTGAGTTGTTTC+GGG - chr3.2:71638469-71638488 None:intergenic 40.0%
! TCAATGGACATCTTCTGAGA+AGG - chr3.2:71634205-71634224 None:intergenic 40.0%
! TCTTCTGTTGAGTTGTTTCG+GGG - chr3.2:71638468-71638487 None:intergenic 40.0%
!! AAAGTTGATGTTGGTGAGAG+AGG + chr3.2:71634226-71634245 MS.gene71305:CDS 40.0%
!! GAAAGAATGCATTGGTTCCT+TGG + chr3.2:71637388-71637407 MS.gene71305:CDS 40.0%
!! TCTCAATTTCTGGTGGATTC+CGG - chr3.2:71636422-71636441 None:intergenic 40.0%
!!! GGATTAGGTGGAGACTTTTT+TGG + chr3.2:71637511-71637530 MS.gene71305:intron 40.0%
!!! GGTAGTTTTATTTGATGCGG+CGG - chr3.2:71638215-71638234 None:intergenic 40.0%
!!! TCCGGAACCCTTATTTTGAT+AGG - chr3.2:71636404-71636423 None:intergenic 40.0%
AACCCAAAATCTCAGCATGG+AGG - chr3.2:71635562-71635581 None:intergenic 45.0%
ACCTCTTCAGGGAAGAAATC+AGG - chr3.2:71637060-71637079 None:intergenic 45.0%
AGAAGTGAGTATGGTTGACG+AGG - chr3.2:71635026-71635045 None:intergenic 45.0%
AGCAGAACTAGATCGCTACT+TGG + chr3.2:71636791-71636810 MS.gene71305:CDS 45.0%
AGGATAGAGGTCATATCAGG+AGG - chr3.2:71635851-71635870 None:intergenic 45.0%
ATATTGGCACCGTGTAGGTT+CGG + chr3.2:71637349-71637368 MS.gene71305:intron 45.0%
ATCCTCTTAGCAGATGCCAT+GGG + chr3.2:71635866-71635885 MS.gene71305:intron 45.0%
ATCTCACATTCTCCCTAGCA+AGG - chr3.2:71635172-71635191 None:intergenic 45.0%
CCCAACACAACTTCAAACCA+TGG - chr3.2:71635589-71635608 None:intergenic 45.0%
CCTCTTCAGGGAAGAAATCA+GGG - chr3.2:71637059-71637078 None:intergenic 45.0%
CTCGCTATTACACAAGTCCA+CGG - chr3.2:71638510-71638529 None:intergenic 45.0%
CTCTGCAACCTCATCATTGA+TGG + chr3.2:71634099-71634118 MS.gene71305:CDS 45.0%
GAAGAAGACTGAGGGATATG+AGG + chr3.2:71638650-71638669 MS.gene71305:CDS 45.0%
GAATCATTCTCACATCCCCA+AGG - chr3.2:71634133-71634152 None:intergenic 45.0%
GAGAAATGGTTGTCTCAGTC+AGG + chr3.2:71634175-71634194 MS.gene71305:CDS 45.0%
GATAGAGGTCATATCAGGAG+GGG - chr3.2:71635849-71635868 None:intergenic 45.0%
GCAGAGAATGCAGTCAAATG+TGG + chr3.2:71635281-71635300 MS.gene71305:intron 45.0%
GGATAGAGGTCATATCAGGA+GGG - chr3.2:71635850-71635869 None:intergenic 45.0%
GGCCAACCAGTAATCCTTAT+AGG - chr3.2:71638044-71638063 None:intergenic 45.0%
GGGGAGCTTCTGTTATCATA+TGG + chr3.2:71637804-71637823 MS.gene71305:CDS 45.0%
GGTAAGTGGATCGCTAGATT+TGG + chr3.2:71638433-71638452 MS.gene71305:intron 45.0%
GTTAGTCCTTCAAGCATGAG+AGG + chr3.2:71638095-71638114 MS.gene71305:CDS 45.0%
TATCCTCTTAGCAGATGCCA+TGG + chr3.2:71635865-71635884 MS.gene71305:intron 45.0%
TCAATACTTCACCAGCTTCC+GGG - chr3.2:71634902-71634921 None:intergenic 45.0%
TCAGGAGTGATGACAAGTTC+AGG - chr3.2:71634304-71634323 None:intergenic 45.0%
TCATGATATTGGCACCGTGT+AGG + chr3.2:71637344-71637363 MS.gene71305:intron 45.0%
TCGAACAAACTCAACACCCA+TGG - chr3.2:71635885-71635904 None:intergenic 45.0%
TTGATCGATCCACAGGTAAG+TGG + chr3.2:71638419-71638438 MS.gene71305:intron 45.0%
! AAAAGTATGTGACCGCGATC+TGG - chr3.2:71635361-71635380 None:intergenic 45.0%
! AAGGATTACTGGTTGGCCAT+TGG + chr3.2:71638046-71638065 MS.gene71305:CDS 45.0%
! AGGAATAAGAGTGGTGGTGT+TGG - chr3.2:71634008-71634027 None:intergenic 45.0%
! CATCCTCCATGCTGAGATTT+TGG + chr3.2:71635556-71635575 MS.gene71305:intron 45.0%
! GAGTTTGTTCGACCCTAGTA+TGG + chr3.2:71635893-71635912 MS.gene71305:intron 45.0%
! TGGTTGGCCATTGGAGTTAA+TGG + chr3.2:71638055-71638074 MS.gene71305:CDS 45.0%
!! AGCTGTTTCTCTGATGTAGG+AGG - chr3.2:71636629-71636648 None:intergenic 45.0%
!! GCTAAAAAGGGTGCTCTTAG+TGG + chr3.2:71635797-71635816 MS.gene71305:intron 45.0%
!! GCTGTTTCTCTGATGTAGGA+GGG - chr3.2:71636628-71636647 None:intergenic 45.0%
ACTGTCTATGAGGCCCTGTT+TGG - chr3.2:71634634-71634653 None:intergenic 50.0%
ACTTGTGTAATAGCGAGCGC+AGG + chr3.2:71638513-71638532 MS.gene71305:CDS 50.0%
AGACTGAGGGATATGAGGAC+TGG + chr3.2:71638655-71638674 MS.gene71305:CDS 50.0%
ATCTCAGCATGGAGGATGCA+AGG - chr3.2:71635554-71635573 None:intergenic 50.0%
CCACCCAATCTCTACGAAGA+AGG - chr3.2:71635727-71635746 None:intergenic 50.0%
CCCTGATTTCTTCCCTGAAG+AGG + chr3.2:71637056-71637075 MS.gene71305:CDS 50.0%
CCTTCTTCGTAGAGATTGGG+TGG + chr3.2:71635724-71635743 MS.gene71305:intron 50.0%
GCGATCTGGCTGAGACAAAA+CGG - chr3.2:71635347-71635366 None:intergenic 50.0%
GGAGAGAGAATGACGCAGTA+CGG + chr3.2:71636289-71636308 MS.gene71305:intron 50.0%
GGAGTGATGACAAGTTCAGG+AGG - chr3.2:71634301-71634320 None:intergenic 50.0%
GGCATCTGCTAAGAGGATAG+AGG - chr3.2:71635864-71635883 None:intergenic 50.0%
GTCAAATGTGGCCTCAATCG+CGG + chr3.2:71635293-71635312 MS.gene71305:intron 50.0%
GTTGCAAGCAATGGCCAATC+CGG - chr3.2:71634939-71634958 None:intergenic 50.0%
TACCTGCTCACCTGGTTGAT+AGG - chr3.2:71637582-71637601 None:intergenic 50.0%
TCTAGCGATCCACTTACCTG+TGG - chr3.2:71638431-71638450 None:intergenic 50.0%
TTATTAGGAGTGGAGCTGCC+CGG + chr3.2:71634881-71634900 MS.gene71305:intron 50.0%
! ACCTGCTCACCTGGTTGATA+GGG - chr3.2:71637581-71637600 None:intergenic 50.0%
! GTTTTGTCTCAGCCAGATCG+CGG + chr3.2:71635346-71635365 MS.gene71305:intron 50.0%
!! CTTTCTAAAGCAGCTAGCCG+TGG + chr3.2:71638490-71638509 MS.gene71305:CDS 50.0%
ACGGATCGTCCCTATCAACC+AGG + chr3.2:71637569-71637588 MS.gene71305:CDS 55.0%
AGAGGGCAACCGAACCTACA+CGG - chr3.2:71637361-71637380 None:intergenic 55.0%
CACCCATGGCATCTGCTAAG+AGG - chr3.2:71635871-71635890 None:intergenic 55.0%
CTTGGATTCGTGCCCTCCTT+TGG - chr3.2:71637837-71637856 None:intergenic 55.0%
GTTCGGTTGCCCTCTATGGA+TGG + chr3.2:71637366-71637385 MS.gene71305:CDS 55.0%
TCCCTATCAACCAGGTGAGC+AGG + chr3.2:71637577-71637596 MS.gene71305:CDS 55.0%
TCGCGCATGGTGAGTCAATC+TGG + chr3.2:71637208-71637227 MS.gene71305:intron 55.0%
! ATGACGCAGTACGGAAGCGT+AGG + chr3.2:71636298-71636317 MS.gene71305:intron 55.0%
! CGGCATTCTTTTCTCGCGCA+TGG + chr3.2:71637195-71637214 MS.gene71305:CDS 55.0%
! GGGTTAGCAAGCGCTAAACC+TGG + chr3.2:71636319-71636338 MS.gene71305:intron 55.0%
! GTAGGTTCGGTTGCCCTCTA+TGG + chr3.2:71637362-71637381 MS.gene71305:intron 55.0%
! TGACGCAGTACGGAAGCGTA+GGG + chr3.2:71636299-71636318 MS.gene71305:intron 55.0%
GCCTCAATCGCGGTCAGCTG+CGG + chr3.2:71635303-71635322 MS.gene71305:intron 65.0%
GAGTGGAGCTGCCCGGAAGC+TGG + chr3.2:71634888-71634907 MS.gene71305:CDS 70.0%
GCCGCAGCTGACCGCGATTG+AGG - chr3.2:71635307-71635326 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 71633974 71638729 71633974 ID=MS.gene71305
chr3.2 mRNA 71633974 71638729 71633974 ID=MS.gene71305.t1;Parent=MS.gene71305
chr3.2 exon 71633974 71634327 71633974 ID=MS.gene71305.t1.exon1;Parent=MS.gene71305.t1
chr3.2 CDS 71633974 71634327 71633974 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71634888 71635051 71634888 ID=MS.gene71305.t1.exon2;Parent=MS.gene71305.t1
chr3.2 CDS 71634888 71635051 71634888 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71636785 71636868 71636785 ID=MS.gene71305.t1.exon3;Parent=MS.gene71305.t1
chr3.2 CDS 71636785 71636868 71636785 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71637020 71637077 71637020 ID=MS.gene71305.t1.exon4;Parent=MS.gene71305.t1
chr3.2 CDS 71637020 71637077 71637020 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71637163 71637216 71637163 ID=MS.gene71305.t1.exon5;Parent=MS.gene71305.t1
chr3.2 CDS 71637163 71637216 71637163 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71637366 71637437 71637366 ID=MS.gene71305.t1.exon6;Parent=MS.gene71305.t1
chr3.2 CDS 71637366 71637437 71637366 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71637518 71637598 71637518 ID=MS.gene71305.t1.exon7;Parent=MS.gene71305.t1
chr3.2 CDS 71637518 71637598 71637518 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71637774 71637946 71637774 ID=MS.gene71305.t1.exon8;Parent=MS.gene71305.t1
chr3.2 CDS 71637774 71637946 71637774 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71638028 71638130 71638028 ID=MS.gene71305.t1.exon9;Parent=MS.gene71305.t1
chr3.2 CDS 71638028 71638130 71638028 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71638205 71638336 71638205 ID=MS.gene71305.t1.exon10;Parent=MS.gene71305.t1
chr3.2 CDS 71638205 71638336 71638205 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71638434 71638556 71638434 ID=MS.gene71305.t1.exon11;Parent=MS.gene71305.t1
chr3.2 CDS 71638434 71638556 71638434 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
chr3.2 exon 71638643 71638729 71638643 ID=MS.gene71305.t1.exon12;Parent=MS.gene71305.t1
chr3.2 CDS 71638643 71638729 71638643 ID=cds.MS.gene71305.t1;Parent=MS.gene71305.t1
Gene Sequence

>MS.gene71305

ATGGTTGAAGCTTCAGGGATGATGATGTTCACCAACACCACCACTCTTATTCCTACTTTTAACCAAACAATTCACAAAACAACACATCTTGGATTCTCACGTAGAAACAATGCTCATTTTTCACTCTCTGCAACCTCATCATTGATGGAAACTATTCCTTGGGGATGTGAGAATGATTCAATTGAAAATTCATCTTCTCTTGAGAAATGGTTGTCTCAGTCAGGTCTTCCTTCTCAGAAGATGTCCATTGATAAAGTTGATGTTGGTGAGAGAGGACTTGTTGCTTTGAAGAATATTAGGAAAGGAGAGAAGCTTCTTTTTGTTCCTCCTGAACTTGTCATCACTCCTGATTCTGTAAACTCTTCCTTTCTTCTTCTCTTTATTTGTGGAAACAACTTGTGACATGTTTATATAAGTTTATTTTCGTAAGCTCTTCAAGAAGATAGCTTTGAAAACAGCTTATGGATTGACTTGTTTGATTTAATCTATTGGCATAAACACTTTTGAGACTATGAGATAATTTATGGAAACAGCTTATGGTATGTCCATAAGCATAGTGCATAGATAGATTATGAAAACGATTTGACTTTGTTATATCTTTTGTATAGAAATAGCTTATGCATGCTTATGCTATAGGCACTTAATTAAGTTGTTTATCCAAACAGGGCCTCATAGACAGTTATGTGACGATCACCACCATTTTAGTTTATTAATTCAATCCAAGAAGCTTTGTTCAGAAATTAGAATAATACAAGCAAATTATATAAGTATTATGCTGTCGGTATCAACACTCGACAACATTGCTTTATTCAATCCATGCTAAAATTGATGCTTAATGATCAACCTTCTAAACTTGATTTGGATATCTTGTGTTCTGGTGTTTATGATTTTGTTTGGGGTATTTTGGTTATTAGGAGTGGAGCTGCCCGGAAGCTGGTGAAGTATTGAAAAAGAATTCAGTTCCGGATTGGCCATTGCTTGCAACTTACCTTATAAGTGAAGCTAGTCTCATGAAATCTTCCAGATGGTTCAGTTATATATCGGCTTTACCTCGTCAACCATACTCACTTCTTTACTGGTACTTGAATTCAATTGCTCTTATCATGAATTATTTTGTGTGTTTATATTGGGAAGAATTGGAGAAGTGAGTATTGATGAGCAAGAAATTAAAATTAGTAGTTGAAATGCTTTGTTACCTTGCTAGGGAGAATGTGAGATAAATCAAATTGAGACTATTTTACAATAATTCACCAGGGTTTTAAAAAAGGATCGAAGTAACAGTTGGCTGCATCACGATCCTTGATATTGCAGAGAATGCAGTCAAATGTGGCCTCAATCGCGGTCAGCTGCGGCTTCAACAACAACAAAAACCGTTTTGTCTCAGCCAGATCGCGGTCACATACTTTTATTTAAATCCCTGAATGTCACTCCAAAAAAAAAAAAAAAACCGAATGTCACTAATATAAGCCCATCCTAAAATGGTACAAAAGTGAAGACAAAATTAAAATATCTCACGTTATAACAAGCCTTTTAATACAGGTTCCTTTTTGCATGGTTTCTTTGGAAAAATTAGTAGACCTTGCATCCTCCATGCTGAGATTTTGGGTTTATACCATGGTTTGAAGTTGTGTTGGGATACTGGATTTAAGCATGTGGTGTGTCTCTCTGATTCAACTATTGTTGTTGACCTCATCCAAAAGGATTTGAATGTTCATCACAAATATGGAAATTTAGTCATGGCTATTAAACACCTTCTTCGTAGAGATTGGGTGGTTAGTTTACGACATACTTTGCGTGAGGGTAACGCTGCAGCTGATTTTCTAGCTAAAAAGGGTGCTCTTAGTGGTAGTAGCTTTGTTATTTTGAATGAAGCCCCTCCTGATATGACCTCTATCCTCTTAGCAGATGCCATGGGTGTTGAGTTTGTTCGACCCTAGTATGGGTCCTTTTTAGTTTTTTTTTTTTCTTCCCTTTTGTTACCAAAAAAAAAAAGCCTTTTAAACTATAATTTCAATAGAAAAAACTAAAGGTGGTTTATACTTGCTATTTTCTTTTGGTTACTTTTCATTTCCTTCATCTATATCCGTACAAGAGAGGTGTTTCTCTTTTTGTTCTCTGATTTCTCAATTTCATTCCCACTAATTTCTTCCTCTTAATTTCAGTTCCAAGCAAAAAAATCTTCAATGGACTTTACTTCTTCATTCTGTCAATGAAAAAAGAGCAATGTTATTTGAACGTCTAAAAATCAACAACTATTTGACAACGGTATAAAATACACCGTTTATAACTACTATTTACGTGACTATGAGAGAGAGGGAGAGAGAATGACGCAGTACGGAAGCGTAGGGTTAGCAAGCGCTAAACCTGGATAGAAAAGAACAAGTTTGCAAGCGACAAACTTGTGAAAATAGGGTTGCAAGCGACAAACCTATCAAAATAAGGGTTCCGGAATCCACCAGAAATTGAGAGAAAATCTCGAATATTATTAATGAATGAAAAAGTGTGTCTCTTAGGCTACATAAGTTCTGCTTATATAGTGAAAGAAATAACAAACCCGTGGGTCAAAATAAAATAAAACGTAATAATAATAGAAAGTTCTAGAAAATTATTAAGATTTGGTTAAAATAAAATACTATAAAATTCTAAGAAAGCCCTCCTACATCAGAGAAACAGCTAATTAAAAGATGAAATAGTACCAATACGGTATCTTTAGACGGTGTTAGACAACCATAAAGTTGTCAACATAACATTTCTCATAAAAAAAGGGTCTTTCTCAAAATTTTCCTATACAGTTTATTTCTTTCATTTCAGGTCACAAGCAGAACTAGATCGCTACTTGGAAGCTTCACAGATTAGGGAGAGAGCAATTGAAAGGACTAATAATGTTATTGGAACGTATGGACCGATCATTTGTACCTAATATTTCTGCAGATTTTTTAGGCAGTTCATTTCTCTTTTTTAGTATAATGCCTTAATCTACTGTGCTTTCTTGATTGAATAATCCCATGTTTTTCAATAACTAGCAAACTTCCCATTTGTTCTCCAGATACAATGATATGAGGGTTAGAATATTTTCCAAATACCCTGATTTCTTCCCTGAAGAGGTAATTACATCACATTGAACAGGATGAGAATGTAGTTTCAGAAAGTTCGTAGTGAATCTGAATCTGTTATTTGTATGGCTTTCAGGTGTTCAACATCGAGTCCTTCAAATGGTCATTCGGCATTCTTTTCTCGCGCATGGTGAGTCAATCTGGTAGATAAAATGAAACAAAATTATATTCTGTTATTTTTCAATCATTTCATTCAACAAGACTTAGTTTTGCTGTTTCATATTTGAGAGAAATGGCTGATTGTCAGAACATATAATTCATGATATTGGCACCGTGTAGGTTCGGTTGCCCTCTATGGATGGAAAGAATGCATTGGTTCCTTGGGCAGATATGATGAATCATAGTTGTGAGGTAGGGTCTTTCCAAATAAAATCCCTAGCAAGTTTTCCTCAACAAGTTGAACTCTAATATATTTTTTGTCATTGGATTAGGTGGAGACTTTTTTGGATTATGATAAATCGTCAAAGGGAATTGTCTTTACGACGGATCGTCCCTATCAACCAGGTGAGCAGGTAATCATAAACTCAGATGGAATTTGTTAAATTAGATACATAGGATAAGACAGTTAAGTACCTTGGTAAATGAAATGCAAATTCGTTGCACCTTGCCAAAGTGTTTATGACTCTAAAGTTAGCAATATTACCACAAACTGCAATTGATTTCTTTTTCTTGTATCAAATTACACAGGTGTTTATTTCATATGGAAAAAAATCAAACGGGGAGCTTCTGTTATCATATGGATTTGTTCCAAAGGAGGGCACGAATCCAAGTGATTCAGTTGAGTTGTCACTGTCACTCAAGAAATCCGATGAGTCCTATAAGGAGAAGTTAGAACTGTTGAAGAAATATGGATTATCAGGGCGAGTACCTAAGTTTTCATAGTTATTATACCTTTCATGATTAAACTTGTTACTAACTTGTTTGTTCTATTCTTTTTCCAGATCTCAGTGTTTTCCTATAAGGATTACTGGTTGGCCATTGGAGTTAATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCATGAGAGGAAAATTTGAAGAGGTATGCCACTTACTATCTTTGTGAATTCTTTCTTCGAATATGTCGTATAACCAAATGTGTGATTCTTTGGACAGATGGCTGCCGCCGCATCAAATAAAACTACCTCGAAAAAGGACTTGAGATATCCTGAAATAGAGGAGCAAGCATTGCAATTTATACTAGACAGTTGTGAATCTAGTATCTCAAAATACAACAAGTTCTTACAGGCAAGGAAACACTTTAATAATGATTTCAAAAGCAATTTGGTAATCTCTAGCTAGCGAGCTAATCCTAGCTGTTTGTTTCCATTTGATCGATCCACAGGTAAGTGGATCGCTAGATTTGGATGTGACTTCCCCGAAACAACTCAACAGAAGACTCTTTCTAAAGCAGCTAGCCGTGGACTTGTGTAATAGCGAGCGCAGGATATTGTTTCGTGCTCAATATGTAAGATTATAAAAGCACGTTATTTAATTTCTACTTACAAAGGTTGCTTGTCACTAAAGCTAACTCACTTTGAATATTAATTGCAGATATTGCGAAGAAGACTGAGGGATATGAGGACTGGTGAATTAAAAGGCTTGAAAATCTTTAATGGGTTCTGGAATCGTTTCCAATGA
Protein sequence

>MS.gene71305.t1

MVEASGMMMFTNTTTLIPTFNQTIHKTTHLGFSRRNNAHFSLSATSSLMETIPWGCENDSIENSSSLEKWLSQSGLPSQKMSIDKVDVGERGLVALKNIRKGEKLLFVPPELVITPDSEWSCPEAGEVLKKNSVPDWPLLATYLISEASLMKSSRWFSYISALPRQPYSLLYWSQAELDRYLEASQIRERAIERTNNVIGTYNDMRVRIFSKYPDFFPEEVFNIESFKWSFGILFSRMVRLPSMDGKNALVPWADMMNHSCEVETFLDYDKSSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGTNPSDSVELSLSLKKSDESYKEKLELLKKYGLSGSQCFPIRITGWPLELMAYAYLAVSPSSMRGKFEEMAAAASNKTTSKKDLRYPEIEEQALQFILDSCESSISKYNKFLQVSGSLDLDVTSPKQLNRRLFLKQLAVDLCNSERRILFRAQYILRRRLRDMRTGELKGLKIFNGFWNRFQ