Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061806.t1 | XP_013446772.1 | 86 | 286 | 30 | 2 | 1 | 276 | 1 | 286 | 8.40E-119 | 436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061806.t1 | A0A072TTF9 | 86.0 | 286 | 30 | 2 | 1 | 276 | 1 | 286 | 6.0e-119 | 436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene061806 | 0.821933 | 3.10E-53 | -1.69E-46 |
| MS.gene049151 | MS.gene061806 | 0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene061806 | 0.809713 | 1.65E-50 | -1.69E-46 |
| MS.gene049233 | MS.gene061806 | 0.802885 | 4.54E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene061806 | 0.827088 | 1.90E-54 | -1.69E-46 |
| MS.gene049297 | MS.gene061806 | 0.846661 | 1.89E-59 | -1.69E-46 |
| MS.gene049378 | MS.gene061806 | 0.829822 | 4.15E-55 | -1.69E-46 |
| MS.gene049389 | MS.gene061806 | 0.800946 | 1.14E-48 | -1.69E-46 |
| MS.gene049599 | MS.gene061806 | -0.817307 | 3.53E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene061806 | 0.891252 | 4.71E-74 | -1.69E-46 |
| MS.gene049910 | MS.gene061806 | 0.834502 | 2.89E-56 | -1.69E-46 |
| MS.gene049915 | MS.gene061806 | 0.825754 | 3.94E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene061806 | 0.810962 | 8.88E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene061806 | 0.845047 | 5.18E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene061806 | 0.844539 | 7.10E-59 | -1.69E-46 |
| MS.gene050228 | MS.gene061806 | 0.843098 | 1.73E-58 | -1.69E-46 |
| MS.gene050301 | MS.gene061806 | 0.873879 | 1.04E-67 | -1.69E-46 |
| MS.gene050319 | MS.gene061806 | -0.806923 | 6.50E-50 | -1.69E-46 |
| MS.gene050330 | MS.gene061806 | -0.82536 | 4.89E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene061806 | 0.804739 | 1.87E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene061806 | 0.844402 | 7.73E-59 | -1.69E-46 |
| MS.gene050623 | MS.gene061806 | -0.850463 | 1.67E-60 | -1.69E-46 |
| MS.gene050642 | MS.gene061806 | 0.862074 | 6.56E-64 | -1.69E-46 |
| MS.gene050820 | MS.gene061806 | 0.811869 | 5.64E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene061806 | -0.86636 | 3.02E-65 | -1.69E-46 |
| MS.gene051471 | MS.gene061806 | 0.817749 | 2.81E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene061806 | 0.80567 | 1.19E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene061806 | 0.851732 | 7.33E-61 | -1.69E-46 |
| MS.gene051663 | MS.gene061806 | 0.841573 | 4.38E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene061806 | 0.855494 | 6.08E-62 | -1.69E-46 |
| MS.gene051983 | MS.gene061806 | 0.860792 | 1.61E-63 | -1.69E-46 |
| MS.gene052077 | MS.gene061806 | 0.816282 | 5.99E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene061806 | 0.833213 | 6.07E-56 | -1.69E-46 |
| MS.gene052176 | MS.gene061806 | 0.828946 | 6.78E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene061806 | 0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene061806 | 0.838011 | 3.70E-57 | -1.69E-46 |
| MS.gene052207 | MS.gene061806 | 0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene052302 | MS.gene061806 | 0.806503 | 7.97E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene061806 | -0.8532 | 2.80E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene061806 | 0.833963 | 3.94E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene061806 | 0.812338 | 4.46E-51 | -1.69E-46 |
| MS.gene052600 | MS.gene061806 | 0.813276 | 2.78E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene061806 | 0.808169 | 3.53E-50 | -1.69E-46 |
| MS.gene053559 | MS.gene061806 | 0.837787 | 4.23E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene061806 | 0.906245 | 1.82E-80 | -1.69E-46 |
| MS.gene053907 | MS.gene061806 | 0.809529 | 1.81E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene061806 | 0.811375 | 7.23E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene061806 | 0.857573 | 1.49E-62 | -1.69E-46 |
| MS.gene054542 | MS.gene061806 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene061806 | 0.895046 | 1.39E-75 | -1.69E-46 |
| MS.gene054942 | MS.gene061806 | 0.861657 | 8.79E-64 | -1.69E-46 |
| MS.gene054983 | MS.gene061806 | 0.839117 | 1.92E-57 | -1.69E-46 |
| MS.gene055277 | MS.gene061806 | 0.806523 | 7.90E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene061806 | 0.808195 | 3.49E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene061806 | 0.877669 | 5.22E-69 | -1.69E-46 |
| MS.gene055428 | MS.gene061806 | 0.862106 | 6.41E-64 | -1.69E-46 |
| MS.gene05553 | MS.gene061806 | 0.80401 | 2.65E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene061806 | 0.828533 | 8.53E-55 | -1.69E-46 |
| MS.gene055859 | MS.gene061806 | 0.83287 | 7.39E-56 | -1.69E-46 |
| MS.gene056069 | MS.gene061806 | -0.815021 | 1.14E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene061806 | 0.821572 | 3.76E-53 | -1.69E-46 |
| MS.gene056875 | MS.gene061806 | 0.828409 | 9.14E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene061806 | 0.860563 | 1.89E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene061806 | 0.80106 | 1.08E-48 | -1.69E-46 |
| MS.gene057121 | MS.gene061806 | 0.861717 | 8.43E-64 | -1.69E-46 |
| MS.gene057245 | MS.gene061806 | 0.82591 | 3.62E-54 | -1.69E-46 |
| MS.gene057260 | MS.gene061806 | 0.823779 | 1.15E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene061806 | 0.827949 | 1.18E-54 | -1.69E-46 |
| MS.gene057448 | MS.gene061806 | 0.826018 | 3.42E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene061806 | 0.83434 | 3.17E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene061806 | 0.820093 | 8.23E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene061806 | 0.873596 | 1.30E-67 | -1.69E-46 |
| MS.gene058082 | MS.gene061806 | 0.804353 | 2.25E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene061806 | 0.861348 | 1.09E-63 | -1.69E-46 |
| MS.gene058142 | MS.gene061806 | 0.862443 | 5.05E-64 | -1.69E-46 |
| MS.gene058276 | MS.gene061806 | 0.810779 | 9.73E-51 | -1.69E-46 |
| MS.gene058435 | MS.gene061806 | 0.800355 | 1.50E-48 | -1.69E-46 |
| MS.gene058661 | MS.gene061806 | -0.809219 | 2.11E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene061806 | 0.838581 | 2.64E-57 | -1.69E-46 |
| MS.gene058749 | MS.gene061806 | 0.826356 | 2.84E-54 | -1.69E-46 |
| MS.gene058833 | MS.gene061806 | 0.858539 | 7.69E-63 | -1.69E-46 |
| MS.gene058845 | MS.gene061806 | 0.834591 | 2.74E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene061806 | 0.837979 | 3.78E-57 | -1.69E-46 |
| MS.gene059285 | MS.gene061806 | 0.847197 | 1.35E-59 | -1.69E-46 |
| MS.gene059518 | MS.gene061806 | 0.844573 | 6.95E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene061806 | 0.852052 | 5.95E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene061806 | 0.801968 | 7.01E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene061806 | 0.802304 | 5.98E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene061806 | 0.893967 | 3.84E-75 | -1.69E-46 |
| MS.gene059894 | MS.gene061806 | 0.863537 | 2.32E-64 | -1.69E-46 |
| MS.gene059899 | MS.gene061806 | 0.878807 | 2.08E-69 | -1.69E-46 |
| MS.gene060084 | MS.gene061806 | 0.811143 | 8.11E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene061806 | 0.800741 | 1.25E-48 | -1.69E-46 |
| MS.gene060476 | MS.gene061806 | 0.809154 | 2.18E-50 | -1.69E-46 |
| MS.gene060480 | MS.gene061806 | 0.817316 | 3.51E-52 | -1.69E-46 |
| MS.gene060495 | MS.gene061806 | 0.801585 | 8.40E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene061806 | 0.849481 | 3.15E-60 | -1.69E-46 |
| MS.gene061051 | MS.gene061806 | -0.807516 | 4.87E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene061806 | -0.802507 | 5.43E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061806.t1 | MTR_8g089995 | 85.467 | 289 | 26 | 2 | 1 | 276 | 1 | 286 | 1.40e-152 | 429 |
| MS.gene061806.t1 | MTR_8g089995 | 84.647 | 241 | 21 | 2 | 1 | 228 | 1 | 238 | 3.62e-118 | 340 |
| MS.gene061806.t1 | MTR_3g086990 | 48.148 | 243 | 107 | 5 | 30 | 261 | 30 | 264 | 5.59e-52 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061806.t1 | AT5G65250 | 56.522 | 184 | 75 | 2 | 66 | 249 | 93 | 271 | 1.13e-56 | 185 |
Find 81 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTAGGCAGCTTGAGAAAT+TGG | 0.177372 | 4.3:-10441703 | MS.gene061806:CDS |
| AGCCCTGCAATCAGACATTT+TGG | 0.237492 | 4.3:-10439808 | MS.gene061806:CDS |
| CCGTGTTCTTCACTAGTTTC+AGG | 0.242419 | 4.3:+10439264 | None:intergenic |
| TTTGCAGAGAATTGAGAAAT+TGG | 0.262448 | 4.3:-10441766 | MS.gene061806:CDS |
| GTAGTAATTACCTCAGTTAT+AGG | 0.273196 | 4.3:+10441642 | None:intergenic |
| GGAAAGGAAGGAATCAAAAT+TGG | 0.279238 | 4.3:+10442010 | None:intergenic |
| GGCTAATGCTCTTGCGGCCT+CGG | 0.289526 | 4.3:+10439827 | None:intergenic |
| GAACGGTGGGGTTTCTGTTT+CGG | 0.293881 | 4.3:-10441799 | MS.gene061806:CDS |
| CCGTCGCCGTGACTGCAATT+TGG | 0.295008 | 4.3:-10441941 | MS.gene061806:CDS |
| AGAGTAATGCGACGGTTGTT+AGG | 0.336551 | 4.3:-10441731 | MS.gene061806:CDS |
| AGCTTGAGAAATTGGGGATT+AGG | 0.351998 | 4.3:-10441695 | MS.gene061806:CDS |
| TCTAGGCAGCTTGAGAAATT+GGG | 0.354881 | 4.3:-10441702 | MS.gene061806:CDS |
| TCTCCAAAATGTCTGATTGC+AGG | 0.356336 | 4.3:+10439805 | None:intergenic |
| AGGTTCCTTCAAACCCTTCC+TGG | 0.363702 | 4.3:+10441662 | None:intergenic |
| GAATGAGGAGTTGAAGAAAA+AGG | 0.364028 | 4.3:+10442164 | None:intergenic |
| TGGGGTTTCTGTTTCGGAGG+TGG | 0.403058 | 4.3:-10441793 | MS.gene061806:CDS |
| TTGAATGAAGACTGCAGCTC+TGG | 0.409148 | 4.3:-10439862 | MS.gene061806:intron |
| TGGAAAGTGGTTTGAGGCTG+AGG | 0.435164 | 4.3:+10442108 | None:intergenic |
| GAATCTCAATGCGGTAAATC+AGG | 0.435977 | 4.3:-10439214 | MS.gene061806:CDS |
| AGAGAAGAGCGGAGAGTTCG+AGG | 0.448141 | 4.3:+10441985 | None:intergenic |
| GAGTAATGCGACGGTTGTTA+GGG | 0.448272 | 4.3:-10441730 | MS.gene061806:CDS |
| GACGGAAATTTGAGATCGGC+GGG | 0.467109 | 4.3:+10442040 | None:intergenic |
| GCAGAGAATTGAGAAATTGG+AGG | 0.472739 | 4.3:-10441763 | MS.gene061806:CDS |
| GGAAGTGAAACGGTGGGGTG+TGG | 0.478399 | 4.3:+10442088 | None:intergenic |
| TTGCGAAGGCAGGTAAGCTA+TGG | 0.479688 | 4.3:-10439296 | MS.gene061806:CDS |
| AGTGGTTTGAGGCTGAGGAT+TGG | 0.483125 | 4.3:+10442113 | None:intergenic |
| GAAGGAATCAAAATTGGAAT+CGG | 0.487467 | 4.3:+10442016 | None:intergenic |
| AAACGGTGGGGTGTGGAAAG+TGG | 0.487596 | 4.3:+10442095 | None:intergenic |
| AGAGGACGTAAGAGTGAATG+AGG | 0.489716 | 4.3:+10442149 | None:intergenic |
| CGGTGATTAGGAGAAGGAAA+TGG | 0.490410 | 4.3:-10441836 | MS.gene061806:CDS |
| GGATTAGGTTTCGTGTTACC+AGG | 0.498013 | 4.3:-10441680 | MS.gene061806:CDS |
| ATTCTTGCAATTGCGAAGGC+AGG | 0.502036 | 4.3:-10439306 | MS.gene061806:CDS |
| CGGAGAGTTCGAGGAAGGAA+AGG | 0.506937 | 4.3:+10441994 | None:intergenic |
| GAGAATTGAGAAATTGGAGG+AGG | 0.507588 | 4.3:-10441760 | MS.gene061806:CDS |
| TGTTACCAGGAAGGGTTTGA+AGG | 0.509421 | 4.3:-10441667 | MS.gene061806:CDS |
| GGAGTTGGAGTGGACGGTGT+AGG | 0.511955 | 4.3:+10442067 | None:intergenic |
| CGTGACTGCAATTTGGAAGA+AGG | 0.512903 | 4.3:-10441934 | MS.gene061806:CDS |
| ATTGGAGTATTGAGATGAAG+AGG | 0.520273 | 4.3:+10442131 | None:intergenic |
| CTCCAAAATGTCTGATTGCA+GGG | 0.525218 | 4.3:+10439806 | None:intergenic |
| CGGAAATTTGAGATCGGCGG+GGG | 0.525952 | 4.3:+10442042 | None:intergenic |
| ACTTTCATTTCAGGATTACA+AGG | 0.527608 | 4.3:-10438874 | MS.gene061806:intron |
| ATCAAAATTGGAATCGGCGA+CGG | 0.530085 | 4.3:+10442022 | None:intergenic |
| CTTCTTCCAAATTGCAGTCA+CGG | 0.532215 | 4.3:+10441935 | None:intergenic |
| GGGGAAGGAGTTGGAGTGGA+CGG | 0.535310 | 4.3:+10442061 | None:intergenic |
| CTAGGCAGCTTGAGAAATTG+GGG | 0.538326 | 4.3:-10441701 | MS.gene061806:CDS |
| CGGTGGGGTTTCTGTTTCGG+AGG | 0.539820 | 4.3:-10441796 | MS.gene061806:CDS |
| AGGTTTCGTGTTACCAGGAA+GGG | 0.543976 | 4.3:-10441675 | MS.gene061806:CDS |
| GAGAGACGGTGTTGAACGGT+GGG | 0.546933 | 4.3:-10441812 | MS.gene061806:CDS |
| GAGAAGGAAATGGAGAGAGA+CGG | 0.562581 | 4.3:-10441826 | MS.gene061806:CDS |
| TTTGAAGGAACCTATAACTG+AGG | 0.565016 | 4.3:-10441652 | MS.gene061806:intron |
| AAGAGCGGAGAGTTCGAGGA+AGG | 0.566579 | 4.3:+10441989 | None:intergenic |
| TAGGTTTCGTGTTACCAGGA+AGG | 0.568467 | 4.3:-10441676 | MS.gene061806:CDS |
| GAGTTCGAGGAAGGAAAGGA+AGG | 0.569587 | 4.3:+10441998 | None:intergenic |
| AATGCGTGAAATGGTGATGA+TGG | 0.584311 | 4.3:+10442189 | None:intergenic |
| TGGAGAGAGACGGTGTTGAA+CGG | 0.589136 | 4.3:-10441816 | MS.gene061806:CDS |
| GGACGGTGTAGGAAGTGAAA+CGG | 0.592277 | 4.3:+10442078 | None:intergenic |
| TGCGAAGGCAGGTAAGCTAT+GGG | 0.592521 | 4.3:-10439295 | MS.gene061806:CDS |
| AAGGAGTTATATCTTGCTAT+CGG | 0.595941 | 4.3:-10441915 | MS.gene061806:CDS |
| CGACGGAAATTTGAGATCGG+CGG | 0.599042 | 4.3:+10442039 | None:intergenic |
| CTGGTGCGGTGATTAGGAGA+AGG | 0.610719 | 4.3:-10441842 | MS.gene061806:CDS |
| GGTGTAGGAAGTGAAACGGT+GGG | 0.613998 | 4.3:+10442082 | None:intergenic |
| CGGCGACGGAAATTTGAGAT+CGG | 0.614058 | 4.3:+10442036 | None:intergenic |
| CCAAATTGCAGTCACGGCGA+CGG | 0.616365 | 4.3:+10441941 | None:intergenic |
| GGGGTGTGGAAAGTGGTTTG+AGG | 0.618981 | 4.3:+10442102 | None:intergenic |
| TTGCAGGGCTAATGCTCTTG+CGG | 0.622054 | 4.3:+10439821 | None:intergenic |
| GGATTTGAAGAGTAATGCGA+CGG | 0.629644 | 4.3:-10441739 | MS.gene061806:CDS |
| GACGGTGAAAGATACGATGA+GGG | 0.637410 | 4.3:+10441959 | None:intergenic |
| CGACGGTGAAAGATACGATG+AGG | 0.643423 | 4.3:+10441958 | None:intergenic |
| TCTCATTCTTGCAATTGCGA+AGG | 0.648334 | 4.3:-10439310 | MS.gene061806:CDS |
| AGAGAGACGGTGTTGAACGG+TGG | 0.648405 | 4.3:-10441813 | MS.gene061806:CDS |
| CGGTGTAGGAAGTGAAACGG+TGG | 0.657647 | 4.3:+10442081 | None:intergenic |
| TCTCAATGCGGTAAATCAGG+AGG | 0.687985 | 4.3:-10439211 | MS.gene061806:intron |
| AGAGACGGTGTTGAACGGTG+GGG | 0.693868 | 4.3:-10441811 | MS.gene061806:CDS |
| TCGGTAACAGAGTTGCTCCG+TGG | 0.696566 | 4.3:-10441896 | MS.gene061806:CDS |
| CCTGAAACTAGTGAAGAACA+CGG | 0.696745 | 4.3:-10439264 | MS.gene061806:CDS |
| GATGAGGGAAGAGAGAAGAG+CGG | 0.709448 | 4.3:+10441974 | None:intergenic |
| CAGATGAATATGCATTGGTG+TGG | 0.711307 | 4.3:-10438794 | MS.gene061806:CDS |
| TCTGGCACAGAAGAATTCCG+AGG | 0.724089 | 4.3:-10439844 | MS.gene061806:CDS |
| CTCAGCTGCGAATCTCAATG+CGG | 0.734213 | 4.3:-10439223 | MS.gene061806:CDS |
| GTGTAGGAAGTGAAACGGTG+GGG | 0.736083 | 4.3:+10442083 | None:intergenic |
| ACGGAAATTTGAGATCGGCG+GGG | 0.740613 | 4.3:+10442041 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTTTTTTTTTTTTTGA+GGG | - | chr4.3:10439825-10439844 | MS.gene061806:CDS | 10.0% |
| !!! | TTCTTTTTTTTTTTTTTTTG+AGG | - | chr4.3:10439824-10439843 | MS.gene061806:CDS | 10.0% |
| !! | ACATTTCATAATAAACTTTA+TGG | + | chr4.3:10439430-10439449 | None:intergenic | 15.0% |
| !! | TATAAGCAATAATATCATAA+TGG | - | chr4.3:10439933-10439952 | MS.gene061806:intron | 15.0% |
| !! | TATTCTATCTAATATTCAAT+AGG | + | chr4.3:10439671-10439690 | None:intergenic | 15.0% |
| !! | TATTGAATATTAGATAGAAT+AGG | - | chr4.3:10439670-10439689 | MS.gene061806:intron | 15.0% |
| !! | AATGATTACACATTTACTAA+GGG | - | chr4.3:10441951-10441970 | MS.gene061806:CDS | 20.0% |
| !! | TAATGATTACACATTTACTA+AGG | - | chr4.3:10441950-10441969 | MS.gene061806:CDS | 20.0% |
| !!! | AGTTTGTTATTGAACTTTAA+AGG | - | chr4.3:10441313-10441332 | MS.gene061806:intron | 20.0% |
| !!! | ATTTTGTTATTTGAACAAGT+CGG | + | chr4.3:10439741-10439760 | None:intergenic | 20.0% |
| !!! | TTAAAGGTAACATTATTTTG+TGG | - | chr4.3:10441329-10441348 | MS.gene061806:intron | 20.0% |
| !!! | TTTAGTATAGTTTTTACCAA+TGG | - | chr4.3:10439639-10439658 | MS.gene061806:intron | 20.0% |
| ! | AAAAACAGATGAATATGCAT+TGG | - | chr4.3:10442186-10442205 | MS.gene061806:CDS | 25.0% |
| ! | AGAGTTTAAGTAACATTGAA+GGG | + | chr4.3:10441255-10441274 | None:intergenic | 25.0% |
| ! | ATTATAAAGACGAAAACTGT+TGG | + | chr4.3:10439496-10439515 | None:intergenic | 25.0% |
| ! | TAGAGTTTAAGTAACATTGA+AGG | + | chr4.3:10441256-10441275 | None:intergenic | 25.0% |
| ! | TCAAATATTCTAGCAATGTT+AGG | - | chr4.3:10439957-10439976 | MS.gene061806:intron | 25.0% |
| ! | TGTTCATTTACTTTCATTTC+AGG | - | chr4.3:10442102-10442121 | MS.gene061806:CDS | 25.0% |
| ! | TTCCTAAAAACATAAGCTTA+TGG | - | chr4.3:10440156-10440175 | MS.gene061806:intron | 25.0% |
| ! | TTTATGTGCCAATAAAATTC+TGG | + | chr4.3:10441930-10441949 | None:intergenic | 25.0% |
| !! | ATCCATAAGCTTATGTTTTT+AGG | + | chr4.3:10440161-10440180 | None:intergenic | 25.0% |
| !! | TTTTTGTTACAGCAAAACTA+AGG | + | chr4.3:10442171-10442190 | None:intergenic | 25.0% |
| !!! | TATCTTTGAAACAAAGTATG+AGG | - | chr4.3:10440692-10440711 | MS.gene061806:intron | 25.0% |
| !!! | TTACTAGTGTTTTTAGCTTA+AGG | + | chr4.3:10440427-10440446 | None:intergenic | 25.0% |
| AAACTGGAATACTAGATTCA+TGG | + | chr4.3:10441512-10441531 | None:intergenic | 30.0% | |
| ACTGTTGGAATATATTCAAG+AGG | + | chr4.3:10439481-10439500 | None:intergenic | 30.0% | |
| ACTTTCATTTCAGGATTACA+AGG | - | chr4.3:10442111-10442130 | MS.gene061806:CDS | 30.0% | |
| GAAAACCATCAAATTACAGA+GGG | - | chr4.3:10441829-10441848 | MS.gene061806:CDS | 30.0% | |
| GAAGGAATCAAAATTGGAAT+CGG | + | chr4.3:10438972-10438991 | None:intergenic | 30.0% | |
| GTAGTAATTACCTCAGTTAT+AGG | + | chr4.3:10439346-10439365 | None:intergenic | 30.0% | |
| TTAAGGTTCATAACCAATCT+TGG | - | chr4.3:10439992-10440011 | MS.gene061806:intron | 30.0% | |
| TTCCAGTAATATGAATTCCT+CGG | + | chr4.3:10440887-10440906 | None:intergenic | 30.0% | |
| TTTAACCCAAGCTTCAAATT+TGG | + | chr4.3:10441804-10441823 | None:intergenic | 30.0% | |
| TTTGCAGAGAATTGAGAAAT+TGG | - | chr4.3:10439219-10439238 | MS.gene061806:CDS | 30.0% | |
| ! | AAGGAGTTATATCTTGCTAT+CGG | - | chr4.3:10439070-10439089 | MS.gene061806:intron | 30.0% |
| ! | ACCAGATTGAGTCAATTTTT+AGG | + | chr4.3:10440808-10440827 | None:intergenic | 30.0% |
| ! | ATTCAATAGGTCTTTTCCAT+TGG | + | chr4.3:10439658-10439677 | None:intergenic | 30.0% |
| ! | CAAAGTAGCCAGAATTTTAT+TGG | - | chr4.3:10441919-10441938 | MS.gene061806:CDS | 30.0% |
| ! | CCAGATTGAGTCAATTTTTA+GGG | + | chr4.3:10440807-10440826 | None:intergenic | 30.0% |
| ! | TTAGGTTGCTGACAAAATTA+AGG | - | chr4.3:10439975-10439994 | MS.gene061806:intron | 30.0% |
| !! | TCATTAACATTTTGAGTGTC+TGG | - | chr4.3:10441023-10441042 | MS.gene061806:intron | 30.0% |
| AAAAAGGTGAATGCGTGAAA+TGG | + | chr4.3:10438808-10438827 | None:intergenic | 35.0% | |
| AAAATCTCTAGTCTGACGTA+TGG | + | chr4.3:10441539-10441558 | None:intergenic | 35.0% | |
| AAATCTCTAGTCTGACGTAT+GGG | + | chr4.3:10441538-10441557 | None:intergenic | 35.0% | |
| AATAGAGTCTGGCACTTTAT+TGG | - | chr4.3:10440322-10440341 | MS.gene061806:intron | 35.0% | |
| ACCAAAAACAACAAACTCCA+CGG | + | chr4.3:10439109-10439128 | None:intergenic | 35.0% | |
| ACTAACCTCAAACTGCTATA+GGG | - | chr4.3:10440299-10440318 | MS.gene061806:intron | 35.0% | |
| AGGTCAGAAAACAATGAAAC+TGG | - | chr4.3:10440727-10440746 | MS.gene061806:intron | 35.0% | |
| ATCGAAGATTGATTGAAAGC+CGG | + | chr4.3:10440264-10440283 | None:intergenic | 35.0% | |
| ATTGCAACCAGAAGTAGTTA+GGG | - | chr4.3:10440062-10440081 | MS.gene061806:intron | 35.0% | |
| CAAAGTATGAGGTTTCAAGA+AGG | - | chr4.3:10440703-10440722 | MS.gene061806:intron | 35.0% | |
| GAATGAGGAGTTGAAGAAAA+AGG | + | chr4.3:10438824-10438843 | None:intergenic | 35.0% | |
| GGAAAACCATCAAATTACAG+AGG | - | chr4.3:10441828-10441847 | MS.gene061806:CDS | 35.0% | |
| GGAAAGGAAGGAATCAAAAT+TGG | + | chr4.3:10438978-10438997 | None:intergenic | 35.0% | |
| GGAAGAAAAAAACAGGAATG+TGG | - | chr4.3:10440496-10440515 | MS.gene061806:intron | 35.0% | |
| GGTCAGAAAACAATGAAACT+GGG | - | chr4.3:10440728-10440747 | MS.gene061806:intron | 35.0% | |
| GGTTGCAATCTAGGTTATTT+AGG | + | chr4.3:10440051-10440070 | None:intergenic | 35.0% | |
| GTCAGAAAACAATGAAACTG+GGG | - | chr4.3:10440729-10440748 | MS.gene061806:intron | 35.0% | |
| TGGTGTTTGATCATTCATGT+AGG | - | chr4.3:10441630-10441649 | MS.gene061806:intron | 35.0% | |
| TGTATTCATGTGTTCGTCAT+TGG | - | chr4.3:10440114-10440133 | MS.gene061806:intron | 35.0% | |
| TTACTCAACGAGTCAATTCA+AGG | - | chr4.3:10442010-10442029 | MS.gene061806:CDS | 35.0% | |
| TTCATCCCTCTGTAATTTGA+TGG | + | chr4.3:10441837-10441856 | None:intergenic | 35.0% | |
| TTGAAGCTTGGGTTAAACTA+AGG | - | chr4.3:10441807-10441826 | MS.gene061806:CDS | 35.0% | |
| TTTGAAGGAACCTATAACTG+AGG | - | chr4.3:10439333-10439352 | MS.gene061806:CDS | 35.0% | |
| ! | ACTTTGACTTTGTGTGTAGA+TGG | + | chr4.3:10441905-10441924 | None:intergenic | 35.0% |
| ! | ATATGTGCTGAGAGTTTGTT+GGG | - | chr4.3:10439791-10439810 | MS.gene061806:CDS | 35.0% |
| ! | CCCTAAAAATTGACTCAATC+TGG | - | chr4.3:10440804-10440823 | MS.gene061806:intron | 35.0% |
| ! | TCGAGTTTGACTTATCTTGA+TGG | - | chr4.3:10441610-10441629 | MS.gene061806:intron | 35.0% |
| ! | TGCAAGAAAATGCAGGTTTT+GGG | - | chr4.3:10440645-10440664 | MS.gene061806:intron | 35.0% |
| ! | TTGCAAGAAAATGCAGGTTT+TGG | - | chr4.3:10440644-10440663 | MS.gene061806:intron | 35.0% |
| !! | ATTGGAGTATTGAGATGAAG+AGG | + | chr4.3:10438857-10438876 | None:intergenic | 35.0% |
| !! | TCTGGTTCTGTGGTAAATTT+CGG | - | chr4.3:10442054-10442073 | MS.gene061806:CDS | 35.0% |
| !! | TTTTTGAGGGAGAGTTTGTT+GGG | - | chr4.3:10439838-10439857 | MS.gene061806:CDS | 35.0% |
| !!! | AGTTTGTTGTTTTTGGTGGT+TGG | - | chr4.3:10439112-10439131 | MS.gene061806:intron | 35.0% |
| !!! | TTTTTTGAGGGAGAGTTTGT+TGG | - | chr4.3:10439837-10439856 | MS.gene061806:CDS | 35.0% |
| AACCCAAGCTTCAAATTTGG+TGG | + | chr4.3:10441801-10441820 | None:intergenic | 40.0% | |
| AACCCCTGATATGAGTAGAT+TGG | - | chr4.3:10440220-10440239 | MS.gene061806:intron | 40.0% | |
| ACAGAAGACTTAGAACACAG+CGG | - | chr4.3:10440474-10440493 | MS.gene061806:intron | 40.0% | |
| ACAGTACAGGATCTACATCT+CGG | + | chr4.3:10440856-10440875 | None:intergenic | 40.0% | |
| AGCTCCAATCTACTCATATC+AGG | + | chr4.3:10440227-10440246 | None:intergenic | 40.0% | |
| AGCTTGAGAAATTGGGGATT+AGG | - | chr4.3:10439290-10439309 | MS.gene061806:CDS | 40.0% | |
| ATCAAAATTGGAATCGGCGA+CGG | + | chr4.3:10438966-10438985 | None:intergenic | 40.0% | |
| ATGAGCTTGCAAGAAAATGC+AGG | - | chr4.3:10440638-10440657 | MS.gene061806:intron | 40.0% | |
| CACATCATTGTGTTGTGTGT+GGG | + | chr4.3:10441452-10441471 | None:intergenic | 40.0% | |
| CAGTAATATGAATTCCTCGG+AGG | + | chr4.3:10440884-10440903 | None:intergenic | 40.0% | |
| CCTGAAACTAGTGAAGAACA+CGG | - | chr4.3:10441721-10441740 | MS.gene061806:CDS | 40.0% | |
| CGAACACATGAATACACACT+TGG | + | chr4.3:10440110-10440129 | None:intergenic | 40.0% | |
| CTAATTCCCCTAACTACTTC+TGG | + | chr4.3:10440072-10440091 | None:intergenic | 40.0% | |
| CTATTCCCTATAGCAGTTTG+AGG | + | chr4.3:10440307-10440326 | None:intergenic | 40.0% | |
| CTCCAAAATGTCTGATTGCA+GGG | + | chr4.3:10441182-10441201 | None:intergenic | 40.0% | |
| CTCCAATCTACTCATATCAG+GGG | + | chr4.3:10440225-10440244 | None:intergenic | 40.0% | |
| CTCCGAGGAATTCATATTAC+TGG | - | chr4.3:10440882-10440901 | MS.gene061806:intron | 40.0% | |
| CTTCTTCCAAATTGCAGTCA+CGG | + | chr4.3:10439053-10439072 | None:intergenic | 40.0% | |
| GAATCTCAATGCGGTAAATC+AGG | - | chr4.3:10441771-10441790 | MS.gene061806:CDS | 40.0% | |
| GACTAACCTCAAACTGCTAT+AGG | - | chr4.3:10440298-10440317 | MS.gene061806:intron | 40.0% | |
| GAGAATTGAGAAATTGGAGG+AGG | - | chr4.3:10439225-10439244 | MS.gene061806:CDS | 40.0% | |
| GATATGTGCTGAGAGTTTGT+TGG | - | chr4.3:10439790-10439809 | MS.gene061806:CDS | 40.0% | |
| GATTGCAACCAGAAGTAGTT+AGG | - | chr4.3:10440061-10440080 | MS.gene061806:intron | 40.0% | |
| GCAGAGAATTGAGAAATTGG+AGG | - | chr4.3:10439222-10439241 | MS.gene061806:CDS | 40.0% | |
| GCTCCAATCTACTCATATCA+GGG | + | chr4.3:10440226-10440245 | None:intergenic | 40.0% | |
| GGAATACTAGATTCATGGTC+TGG | + | chr4.3:10441507-10441526 | None:intergenic | 40.0% | |
| GGATTTGAAGAGTAATGCGA+CGG | - | chr4.3:10439246-10439265 | MS.gene061806:CDS | 40.0% | |
| GTATGAGGTTTCAAGAAGGA+AGG | - | chr4.3:10440707-10440726 | MS.gene061806:intron | 40.0% | |
| GTGGAATCTGAGCAAAAGAT+AGG | - | chr4.3:10440515-10440534 | MS.gene061806:intron | 40.0% | |
| TCAACGAGTCAATTCAAGGA+GGG | - | chr4.3:10442014-10442033 | MS.gene061806:CDS | 40.0% | |
| TCACATCATTGTGTTGTGTG+TGG | + | chr4.3:10441453-10441472 | None:intergenic | 40.0% | |
| TCGAAGATTGATTGAAAGCC+GGG | + | chr4.3:10440263-10440282 | None:intergenic | 40.0% | |
| TCTAGGCAGCTTGAGAAATT+GGG | - | chr4.3:10439283-10439302 | MS.gene061806:CDS | 40.0% | |
| TCTCATTCTTGCAATTGCGA+AGG | - | chr4.3:10441675-10441694 | MS.gene061806:CDS | 40.0% | |
| TCTCCAAAATGTCTGATTGC+AGG | + | chr4.3:10441183-10441202 | None:intergenic | 40.0% | |
| TCTGACGTATGGGTTTAAAC+TGG | + | chr4.3:10441528-10441547 | None:intergenic | 40.0% | |
| TTGCAACCAGAAGTAGTTAG+GGG | - | chr4.3:10440063-10440082 | MS.gene061806:intron | 40.0% | |
| ! | AAAGGTTTTGCTAGCAATGC+AGG | - | chr4.3:10441222-10441241 | MS.gene061806:intron | 40.0% |
| ! | AATGCGTGAAATGGTGATGA+TGG | + | chr4.3:10438799-10438818 | None:intergenic | 40.0% |
| ! | AATTGACTCAATCTGGTTGC+AGG | - | chr4.3:10440811-10440830 | MS.gene061806:intron | 40.0% |
| ! | ACTACTTCTGGTTGCAATCT+AGG | + | chr4.3:10440060-10440079 | None:intergenic | 40.0% |
| ! | AGTGGCTGCTTTCATGAAAT+GGG | + | chr4.3:10440770-10440789 | None:intergenic | 40.0% |
| ! | CAGATGAATATGCATTGGTG+TGG | - | chr4.3:10442191-10442210 | MS.gene061806:CDS | 40.0% |
| ! | GTCCACCAAATTTGAAGCTT+GGG | - | chr4.3:10441796-10441815 | MS.gene061806:CDS | 40.0% |
| ! | TAGTGGCTGCTTTCATGAAA+TGG | + | chr4.3:10440771-10440790 | None:intergenic | 40.0% |
| ! | TTTTTCCCCATCTGTATCCA+CGG | + | chr4.3:10441990-10442009 | None:intergenic | 40.0% |
| !! | AACACTTTAGCTCTCATGTG+CGG | - | chr4.3:10441369-10441388 | MS.gene061806:intron | 40.0% |
| !! | CATATCAGGGGTTAGTTTAG+AGG | + | chr4.3:10440213-10440232 | None:intergenic | 40.0% |
| !! | CATTTTGAGTGTCTGGTTGA+AGG | - | chr4.3:10441030-10441049 | MS.gene061806:intron | 40.0% |
| !! | CTGGTTCTGTGGTAAATTTC+GGG | - | chr4.3:10442055-10442074 | MS.gene061806:CDS | 40.0% |
| !! | GCAATCAGACATTTTGGAGA+AGG | - | chr4.3:10441183-10441202 | MS.gene061806:intron | 40.0% |
| !! | GTTTTGGGTGGAAATGACAT+TGG | - | chr4.3:10440660-10440679 | MS.gene061806:intron | 40.0% |
| !!! | AAGAAAATGCAGGTTTTGGG+TGG | - | chr4.3:10440648-10440667 | MS.gene061806:intron | 40.0% |
| !!! | GTGGAGTTTGTTGTTTTTGG+TGG | - | chr4.3:10439108-10439127 | MS.gene061806:intron | 40.0% |
| !!! | TCCGTGGAGTTTGTTGTTTT+TGG | - | chr4.3:10439105-10439124 | MS.gene061806:intron | 40.0% |
| AAGTTTCCCGTGGATACAGA+TGG | - | chr4.3:10441980-10441999 | MS.gene061806:CDS | 45.0% | |
| AGAGGACGTAAGAGTGAATG+AGG | + | chr4.3:10438839-10438858 | None:intergenic | 45.0% | |
| AGAGTAATGCGACGGTTGTT+AGG | - | chr4.3:10439254-10439273 | MS.gene061806:CDS | 45.0% | |
| AGGGAGATTCACAGTTGTAG+TGG | + | chr4.3:10440788-10440807 | None:intergenic | 45.0% | |
| AGGTTTCGTGTTACCAGGAA+GGG | - | chr4.3:10439310-10439329 | MS.gene061806:CDS | 45.0% | |
| AGTTTCCCGTGGATACAGAT+GGG | - | chr4.3:10441981-10442000 | MS.gene061806:CDS | 45.0% | |
| ATTCTTGCAATTGCGAAGGC+AGG | - | chr4.3:10441679-10441698 | MS.gene061806:CDS | 45.0% | |
| ATTGTGTTGTGTGTGGGTGT+GGG | + | chr4.3:10441446-10441465 | None:intergenic | 45.0% | |
| CAACGAGTCAATTCAAGGAG+GGG | - | chr4.3:10442015-10442034 | MS.gene061806:CDS | 45.0% | |
| CACAGCGGGAAGAAAAAAAC+AGG | - | chr4.3:10440489-10440508 | MS.gene061806:intron | 45.0% | |
| CAGAAGACTTAGAACACAGC+GGG | - | chr4.3:10440475-10440494 | MS.gene061806:intron | 45.0% | |
| CGGTGATTAGGAGAAGGAAA+TGG | - | chr4.3:10439149-10439168 | MS.gene061806:intron | 45.0% | |
| CGTGACTGCAATTTGGAAGA+AGG | - | chr4.3:10439051-10439070 | MS.gene061806:intron | 45.0% | |
| CTAGGCAGCTTGAGAAATTG+GGG | - | chr4.3:10439284-10439303 | MS.gene061806:CDS | 45.0% | |
| CTCAACGAGTCAATTCAAGG+AGG | - | chr4.3:10442013-10442032 | MS.gene061806:CDS | 45.0% | |
| CTGCTATAGGGAATAGAGTC+TGG | - | chr4.3:10440311-10440330 | MS.gene061806:intron | 45.0% | |
| GACGGTGAAAGATACGATGA+GGG | + | chr4.3:10439029-10439048 | None:intergenic | 45.0% | |
| GAGAAGGAAATGGAGAGAGA+CGG | - | chr4.3:10439159-10439178 | MS.gene061806:intron | 45.0% | |
| GAGCTTGAAATGCTAATGCC+CGG | - | chr4.3:10440242-10440261 | MS.gene061806:intron | 45.0% | |
| GAGTAATGCGACGGTTGTTA+GGG | - | chr4.3:10439255-10439274 | MS.gene061806:CDS | 45.0% | |
| GGAGAATTGTCTGAACTCTC+TGG | - | chr4.3:10442036-10442055 | MS.gene061806:CDS | 45.0% | |
| GGATTAGGTTTCGTGTTACC+AGG | - | chr4.3:10439305-10439324 | MS.gene061806:CDS | 45.0% | |
| GTCTAGGCAGCTTGAGAAAT+TGG | - | chr4.3:10439282-10439301 | MS.gene061806:CDS | 45.0% | |
| TAGGTTTCGTGTTACCAGGA+AGG | - | chr4.3:10439309-10439328 | MS.gene061806:CDS | 45.0% | |
| TCTCAATGCGGTAAATCAGG+AGG | - | chr4.3:10441774-10441793 | MS.gene061806:CDS | 45.0% | |
| TGTTACCAGGAAGGGTTTGA+AGG | - | chr4.3:10439318-10439337 | MS.gene061806:CDS | 45.0% | |
| TTGAATGAAGACTGCAGCTC+TGG | - | chr4.3:10441123-10441142 | MS.gene061806:intron | 45.0% | |
| ! | AGCCCTGCAATCAGACATTT+TGG | - | chr4.3:10441177-10441196 | MS.gene061806:intron | 45.0% |
| ! | CCGTGTTCTTCACTAGTTTC+AGG | + | chr4.3:10441724-10441743 | None:intergenic | 45.0% |
| ! | GGTCCACCAAATTTGAAGCT+TGG | - | chr4.3:10441795-10441814 | MS.gene061806:CDS | 45.0% |
| ! | GTGGCTGCTTTCATGAAATG+GGG | + | chr4.3:10440769-10440788 | None:intergenic | 45.0% |
| ! | TGGCTGCTTTCATGAAATGG+GGG | + | chr4.3:10440768-10440787 | None:intergenic | 45.0% |
| ! | TTTTCCCCATCTGTATCCAC+GGG | + | chr4.3:10441989-10442008 | None:intergenic | 45.0% |
| !! | ACATTTTGGAGAAGGAGCTG+GGG | - | chr4.3:10441191-10441210 | MS.gene061806:intron | 45.0% |
| !! | AGACATTTTGGAGAAGGAGC+TGG | - | chr4.3:10441189-10441208 | MS.gene061806:intron | 45.0% |
| !! | CGGTTGTTAGGGTTTTGTCT+AGG | - | chr4.3:10439266-10439285 | MS.gene061806:CDS | 45.0% |
| !! | GACATTTTGGAGAAGGAGCT+GGG | - | chr4.3:10441190-10441209 | MS.gene061806:intron | 45.0% |
| !! | TTTTGACTGGTGCGGTGATT+AGG | - | chr4.3:10439137-10439156 | MS.gene061806:intron | 45.0% |
| !!! | TTGGTGGTTGGTGTTTTGAC+TGG | - | chr4.3:10439124-10439143 | MS.gene061806:intron | 45.0% |
| ACCAATCTTGGCAGCTCTAC+AGG | - | chr4.3:10440004-10440023 | MS.gene061806:intron | 50.0% | |
| AGGTTCCTTCAAACCCTTCC+TGG | + | chr4.3:10439326-10439345 | None:intergenic | 50.0% | |
| CATTGTGTTGTGTGTGGGTG+TGG | + | chr4.3:10441447-10441466 | None:intergenic | 50.0% | |
| CGACGGTGAAAGATACGATG+AGG | + | chr4.3:10439030-10439049 | None:intergenic | 50.0% | |
| CTCAGCTGCGAATCTCAATG+CGG | - | chr4.3:10441762-10441781 | MS.gene061806:CDS | 50.0% | |
| CTGTATCCACGGGAAACTTG+AGG | + | chr4.3:10441979-10441998 | None:intergenic | 50.0% | |
| GAACGGTGGGGTTTCTGTTT+CGG | - | chr4.3:10439186-10439205 | MS.gene061806:intron | 50.0% | |
| GAGTTCGAGGAAGGAAAGGA+AGG | + | chr4.3:10438990-10439009 | None:intergenic | 50.0% | |
| GATGAGGGAAGAGAGAAGAG+CGG | + | chr4.3:10439014-10439033 | None:intergenic | 50.0% | |
| GGACGGTGTAGGAAGTGAAA+CGG | + | chr4.3:10438910-10438929 | None:intergenic | 50.0% | |
| GGTGTAGGAAGTGAAACGGT+GGG | + | chr4.3:10438906-10438925 | None:intergenic | 50.0% | |
| GTGTAGGAAGTGAAACGGTG+GGG | + | chr4.3:10438905-10438924 | None:intergenic | 50.0% | |
| GTTTCCCGTGGATACAGATG+GGG | - | chr4.3:10441982-10442001 | MS.gene061806:CDS | 50.0% | |
| TCCTGTAGAGCTGCCAAGAT+TGG | + | chr4.3:10440008-10440027 | None:intergenic | 50.0% | |
| TCTGGCACAGAAGAATTCCG+AGG | - | chr4.3:10441141-10441160 | MS.gene061806:intron | 50.0% | |
| TGCGAAGGCAGGTAAGCTAT+GGG | - | chr4.3:10441690-10441709 | MS.gene061806:CDS | 50.0% | |
| TTGCAGGGCTAATGCTCTTG+CGG | + | chr4.3:10441167-10441186 | None:intergenic | 50.0% | |
| TTGCGAAGGCAGGTAAGCTA+TGG | - | chr4.3:10441689-10441708 | MS.gene061806:CDS | 50.0% | |
| ! | ACGGAAATTTGAGATCGGCG+GGG | + | chr4.3:10438947-10438966 | None:intergenic | 50.0% |
| ! | AGTGGTTTGAGGCTGAGGAT+TGG | + | chr4.3:10438875-10438894 | None:intergenic | 50.0% |
| ! | CGACGGAAATTTGAGATCGG+CGG | + | chr4.3:10438949-10438968 | None:intergenic | 50.0% |
| ! | CGGCGACGGAAATTTGAGAT+CGG | + | chr4.3:10438952-10438971 | None:intergenic | 50.0% |
| ! | GACGGAAATTTGAGATCGGC+GGG | + | chr4.3:10438948-10438967 | None:intergenic | 50.0% |
| ! | TGGAAAGTGGTTTGAGGCTG+AGG | + | chr4.3:10438880-10438899 | None:intergenic | 50.0% |
| ! | TGGAGAGAGACGGTGTTGAA+CGG | - | chr4.3:10439169-10439188 | MS.gene061806:intron | 50.0% |
| !! | CATTTTGGAGAAGGAGCTGG+GGG | - | chr4.3:10441192-10441211 | MS.gene061806:intron | 50.0% |
| !! | GTCTGAACTCTCTGGTTCTG+TGG | - | chr4.3:10442044-10442063 | MS.gene061806:CDS | 50.0% |
| !!! | GGTTGGTGTTTTGACTGGTG+CGG | - | chr4.3:10439129-10439148 | MS.gene061806:intron | 50.0% |
| AAACGGTGGGGTGTGGAAAG+TGG | + | chr4.3:10438893-10438912 | None:intergenic | 55.0% | |
| AAGAGCGGAGAGTTCGAGGA+AGG | + | chr4.3:10438999-10439018 | None:intergenic | 55.0% | |
| AGAGAAGAGCGGAGAGTTCG+AGG | + | chr4.3:10439003-10439022 | None:intergenic | 55.0% | |
| CCAAATTGCAGTCACGGCGA+CGG | + | chr4.3:10439047-10439066 | None:intergenic | 55.0% | |
| CGGAGAGTTCGAGGAAGGAA+AGG | + | chr4.3:10438994-10439013 | None:intergenic | 55.0% | |
| CGGTGTAGGAAGTGAAACGG+TGG | + | chr4.3:10438907-10438926 | None:intergenic | 55.0% | |
| CTCGGAGGACACTACAGTAC+AGG | + | chr4.3:10440869-10440888 | None:intergenic | 55.0% | |
| CTGGTGCGGTGATTAGGAGA+AGG | - | chr4.3:10439143-10439162 | MS.gene061806:intron | 55.0% | |
| CTGTACTGTAGTGTCCTCCG+AGG | - | chr4.3:10440867-10440886 | MS.gene061806:intron | 55.0% | |
| GGAGCTGGGGGAAGTTCAAA+AGG | - | chr4.3:10441204-10441223 | MS.gene061806:intron | 55.0% | |
| GGGGTGTGGAAAGTGGTTTG+AGG | + | chr4.3:10438886-10438905 | None:intergenic | 55.0% | |
| TCGGTAACAGAGTTGCTCCG+TGG | - | chr4.3:10439089-10439108 | MS.gene061806:intron | 55.0% | |
| TGGGGTTTCTGTTTCGGAGG+TGG | - | chr4.3:10439192-10439211 | MS.gene061806:intron | 55.0% | |
| ! | AATTTGAGATCGGCGGGGGA+AGG | + | chr4.3:10438942-10438961 | None:intergenic | 55.0% |
| ! | AGAGACGGTGTTGAACGGTG+GGG | - | chr4.3:10439174-10439193 | MS.gene061806:intron | 55.0% |
| ! | AGAGAGACGGTGTTGAACGG+TGG | - | chr4.3:10439172-10439191 | MS.gene061806:intron | 55.0% |
| ! | CGGAAATTTGAGATCGGCGG+GGG | + | chr4.3:10438946-10438965 | None:intergenic | 55.0% |
| ! | GAGAGACGGTGTTGAACGGT+GGG | - | chr4.3:10439173-10439192 | MS.gene061806:intron | 55.0% |
| AGGGAGCCTCAAGTTTCCCG+TGG | - | chr4.3:10441970-10441989 | MS.gene061806:CDS | 60.0% | |
| CCGTCGCCGTGACTGCAATT+TGG | - | chr4.3:10439044-10439063 | MS.gene061806:intron | 60.0% | |
| CGGTGGGGTTTCTGTTTCGG+AGG | - | chr4.3:10439189-10439208 | MS.gene061806:intron | 60.0% | |
| GGAAGTGAAACGGTGGGGTG+TGG | + | chr4.3:10438900-10438919 | None:intergenic | 60.0% | |
| GGAGTTGGAGTGGACGGTGT+AGG | + | chr4.3:10438921-10438940 | None:intergenic | 60.0% | |
| GGCTAATGCTCTTGCGGCCT+CGG | + | chr4.3:10441161-10441180 | None:intergenic | 60.0% | |
| GGGGAAGGAGTTGGAGTGGA+CGG | + | chr4.3:10438927-10438946 | None:intergenic | 60.0% | |
| AGATCGGCGGGGGAAGGAGT+TGG | + | chr4.3:10438936-10438955 | None:intergenic | 65.0% | |
| GGGTGTGGGTGTGCGTAGGT+GGG | + | chr4.3:10441432-10441451 | None:intergenic | 65.0% | |
| GTGTGGGTGTGGGTGTGCGT+AGG | + | chr4.3:10441436-10441455 | None:intergenic | 65.0% | |
| TGGGTGTGGGTGTGCGTAGG+TGG | + | chr4.3:10441433-10441452 | None:intergenic | 65.0% | |
| GGCGGGGGAAGGAGTTGGAG+TGG | + | chr4.3:10438931-10438950 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 10438782 | 10442225 | 10438782 | ID=MS.gene061806 |
| chr4.3 | mRNA | 10438782 | 10442225 | 10438782 | ID=MS.gene061806.t1;Parent=MS.gene061806 |
| chr4.3 | exon | 10441653 | 10442225 | 10441653 | ID=MS.gene061806.t1.exon1;Parent=MS.gene061806.t1 |
| chr4.3 | CDS | 10441653 | 10442225 | 10441653 | ID=cds.MS.gene061806.t1;Parent=MS.gene061806.t1 |
| chr4.3 | exon | 10439764 | 10439874 | 10439764 | ID=MS.gene061806.t1.exon2;Parent=MS.gene061806.t1 |
| chr4.3 | CDS | 10439764 | 10439874 | 10439764 | ID=cds.MS.gene061806.t1;Parent=MS.gene061806.t1 |
| chr4.3 | exon | 10439212 | 10439355 | 10439212 | ID=MS.gene061806.t1.exon3;Parent=MS.gene061806.t1 |
| chr4.3 | CDS | 10439212 | 10439355 | 10439212 | ID=cds.MS.gene061806.t1;Parent=MS.gene061806.t1 |
| chr4.3 | exon | 10438782 | 10438883 | 10438782 | ID=MS.gene061806.t1.exon4;Parent=MS.gene061806.t1 |
| chr4.3 | CDS | 10438782 | 10438883 | 10438782 | ID=cds.MS.gene061806.t1;Parent=MS.gene061806.t1 |
| Gene Sequence |
| Protein sequence |
