Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062117.t1 | XP_013463630.1 | 99.5 | 566 | 2 | 1 | 1 | 565 | 1 | 566 | 9.10E-305 | 1055.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062117.t1 | O48713 | 65.0 | 571 | 172 | 7 | 1 | 547 | 1 | 567 | 2.2e-190 | 666.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062117.t1 | A0A072VHN3 | 99.5 | 566 | 2 | 1 | 1 | 565 | 1 | 566 | 6.5e-305 | 1055.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene062117 | 0.816989 | 4.16E-52 | -1.69E-46 |
| MS.gene04920 | MS.gene062117 | 0.801566 | 8.48E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene062117 | 0.824387 | 8.30E-54 | -1.69E-46 |
| MS.gene049368 | MS.gene062117 | 0.809875 | 1.52E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene062117 | 0.824398 | 8.25E-54 | -1.69E-46 |
| MS.gene050084 | MS.gene062117 | 0.851127 | 1.09E-60 | -1.69E-46 |
| MS.gene050085 | MS.gene062117 | 0.877832 | 4.58E-69 | -1.69E-46 |
| MS.gene050114 | MS.gene062117 | 0.81212 | 4.97E-51 | -1.69E-46 |
| MS.gene050317 | MS.gene062117 | 0.82396 | 1.05E-53 | -1.69E-46 |
| MS.gene050359 | MS.gene062117 | 0.846029 | 2.81E-59 | -1.69E-46 |
| MS.gene050384 | MS.gene062117 | 0.841388 | 4.90E-58 | -1.69E-46 |
| MS.gene050386 | MS.gene062117 | 0.852816 | 3.60E-61 | -1.69E-46 |
| MS.gene050414 | MS.gene062117 | 0.800696 | 1.28E-48 | -1.69E-46 |
| MS.gene050551 | MS.gene062117 | 0.824707 | 6.98E-54 | -1.69E-46 |
| MS.gene050646 | MS.gene062117 | 0.837871 | 4.02E-57 | -1.69E-46 |
| MS.gene050654 | MS.gene062117 | 0.877941 | 4.20E-69 | -1.69E-46 |
| MS.gene050689 | MS.gene062117 | 0.846391 | 2.24E-59 | -1.69E-46 |
| MS.gene050838 | MS.gene062117 | 0.838186 | 3.34E-57 | -1.69E-46 |
| MS.gene050931 | MS.gene062117 | 0.81551 | 8.91E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene062117 | 0.844114 | 9.24E-59 | -1.69E-46 |
| MS.gene051003 | MS.gene062117 | 0.867368 | 1.44E-65 | -1.69E-46 |
| MS.gene051184 | MS.gene062117 | 0.807605 | 4.66E-50 | -1.69E-46 |
| MS.gene051233 | MS.gene062117 | 0.831204 | 1.91E-55 | -1.69E-46 |
| MS.gene051234 | MS.gene062117 | 0.836537 | 8.83E-57 | -1.69E-46 |
| MS.gene051343 | MS.gene062117 | 0.858597 | 7.39E-63 | -1.69E-46 |
| MS.gene051381 | MS.gene062117 | 0.854494 | 1.19E-61 | -1.69E-46 |
| MS.gene051382 | MS.gene062117 | 0.815663 | 8.24E-52 | -1.69E-46 |
| MS.gene051856 | MS.gene062117 | 0.811599 | 6.46E-51 | -1.69E-46 |
| MS.gene05188 | MS.gene062117 | 0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene062117 | 0.828151 | 1.05E-54 | -1.69E-46 |
| MS.gene052072 | MS.gene062117 | 0.847375 | 1.20E-59 | -1.69E-46 |
| MS.gene052242 | MS.gene062117 | -0.806876 | 6.65E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene062117 | 0.839806 | 1.27E-57 | -1.69E-46 |
| MS.gene052335 | MS.gene062117 | 0.820489 | 6.68E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene062117 | 0.837014 | 6.67E-57 | -1.69E-46 |
| MS.gene052434 | MS.gene062117 | 0.848476 | 5.98E-60 | -1.69E-46 |
| MS.gene052518 | MS.gene062117 | 0.802297 | 6.00E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene062117 | 0.822475 | 2.32E-53 | -1.69E-46 |
| MS.gene052932 | MS.gene062117 | 0.804731 | 1.88E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene062117 | 0.803739 | 3.02E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene062117 | 0.876215 | 1.67E-68 | -1.69E-46 |
| MS.gene053079 | MS.gene062117 | 0.827054 | 1.93E-54 | -1.69E-46 |
| MS.gene053456 | MS.gene062117 | 0.810606 | 1.06E-50 | -1.69E-46 |
| MS.gene053564 | MS.gene062117 | 0.821375 | 4.17E-53 | -1.69E-46 |
| MS.gene053726 | MS.gene062117 | 0.834811 | 2.42E-56 | -1.69E-46 |
| MS.gene054004 | MS.gene062117 | 0.83364 | 4.75E-56 | -1.69E-46 |
| MS.gene054823 | MS.gene062117 | 0.817456 | 3.27E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene062117 | 0.809436 | 1.89E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene062117 | 0.819193 | 1.32E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene062117 | 0.842643 | 2.28E-58 | -1.69E-46 |
| MS.gene055864 | MS.gene062117 | 0.80842 | 3.12E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene062117 | 0.832205 | 1.08E-55 | -1.69E-46 |
| MS.gene056097 | MS.gene062117 | 0.886012 | 4.95E-72 | -1.69E-46 |
| MS.gene056181 | MS.gene062117 | 0.873348 | 1.58E-67 | -1.69E-46 |
| MS.gene056578 | MS.gene062117 | 0.815865 | 7.43E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene062117 | 0.801974 | 6.99E-49 | -1.69E-46 |
| MS.gene056786 | MS.gene062117 | 0.81839 | 2.01E-52 | -1.69E-46 |
| MS.gene056787 | MS.gene062117 | 0.869396 | 3.19E-66 | -1.69E-46 |
| MS.gene056831 | MS.gene062117 | 0.84048 | 8.48E-58 | -1.69E-46 |
| MS.gene056849 | MS.gene062117 | 0.835288 | 1.83E-56 | -1.69E-46 |
| MS.gene056986 | MS.gene062117 | 0.804294 | 2.31E-49 | -1.69E-46 |
| MS.gene056992 | MS.gene062117 | 0.816938 | 4.27E-52 | -1.69E-46 |
| MS.gene057055 | MS.gene062117 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene057234 | MS.gene062117 | 0.801117 | 1.05E-48 | -1.69E-46 |
| MS.gene057622 | MS.gene062117 | 0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene062117 | 0.83296 | 7.02E-56 | -1.69E-46 |
| MS.gene057999 | MS.gene062117 | 0.810846 | 9.41E-51 | -1.69E-46 |
| MS.gene058054 | MS.gene062117 | 0.848282 | 6.77E-60 | -1.69E-46 |
| MS.gene058055 | MS.gene062117 | 0.817443 | 3.29E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene062117 | 0.8495 | 3.11E-60 | -1.69E-46 |
| MS.gene058429 | MS.gene062117 | 0.80608 | 9.79E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene062117 | 0.800601 | 1.33E-48 | -1.69E-46 |
| MS.gene058646 | MS.gene062117 | 0.820215 | 7.71E-53 | -1.69E-46 |
| MS.gene058654 | MS.gene062117 | 0.813565 | 2.40E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene062117 | 0.827795 | 1.28E-54 | -1.69E-46 |
| MS.gene059007 | MS.gene062117 | 0.857921 | 1.17E-62 | -1.69E-46 |
| MS.gene059050 | MS.gene062117 | 0.826212 | 3.07E-54 | -1.69E-46 |
| MS.gene059146 | MS.gene062117 | 0.888959 | 3.72E-73 | -1.69E-46 |
| MS.gene059360 | MS.gene062117 | 0.807722 | 4.40E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene062117 | 0.807038 | 6.14E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene062117 | 0.833394 | 5.47E-56 | -1.69E-46 |
| MS.gene06011 | MS.gene062117 | 0.824928 | 6.19E-54 | -1.69E-46 |
| MS.gene060296 | MS.gene062117 | 0.821059 | 4.94E-53 | -1.69E-46 |
| MS.gene060563 | MS.gene062117 | 0.81621 | 6.22E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene062117 | 0.83731 | 5.61E-57 | -1.69E-46 |
| MS.gene060870 | MS.gene062117 | 0.803812 | 2.92E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene062117 | 0.807965 | 3.91E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene062117 | 0.838982 | 2.08E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene062117 | 0.827743 | 1.32E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene062117 | 0.838804 | 2.31E-57 | -1.69E-46 |
| MS.gene061006 | MS.gene062117 | 0.812657 | 3.80E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene062117 | 0.819916 | 9.04E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062117.t1 | MTR_2g044200 | 99.470 | 566 | 2 | 1 | 1 | 565 | 1 | 566 | 0.0 | 1152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062117.t1 | AT2G26460 | 70.246 | 568 | 147 | 8 | 1 | 547 | 1 | 567 | 0.0 | 738 |
Find 157 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCTCCCATATCCATTT+TGG | 0.164347 | 2.3:+45751978 | None:intergenic |
| CCTGAACCTGAACCTGTTTA+TGG | 0.175752 | 2.3:-45754042 | MS.gene062117:CDS |
| TACCTTCGTCTTGGTTCTTC+TGG | 0.197431 | 2.3:-45754755 | MS.gene062117:CDS |
| TGATTCTCTCTTGAAATAAT+AGG | 0.201096 | 2.3:+45754210 | None:intergenic |
| GTGGAATATTTACATCTTCT+TGG | 0.231956 | 2.3:+45752208 | None:intergenic |
| CTGTGCGGATTGACACTTTC+TGG | 0.246037 | 2.3:+45756584 | None:intergenic |
| TCTCTATATTTCGGCAATTC+TGG | 0.267583 | 2.3:+45758994 | None:intergenic |
| GAGCATACACATTTGGTTAA+AGG | 0.269058 | 2.3:-45756820 | MS.gene062117:CDS |
| AATGACATTCATTTATAATA+TGG | 0.274261 | 2.3:-45756357 | MS.gene062117:intron |
| GAGGAGAAGGATCGAGGTTT+AGG | 0.285126 | 2.3:-45752162 | MS.gene062117:CDS |
| TAACTCTCTGAGATGAAATT+AGG | 0.295433 | 2.3:+45752072 | None:intergenic |
| GCAAATCATTGTTGAGCTTC+TGG | 0.297273 | 2.3:+45751379 | None:intergenic |
| TGACTTGTCCAAAATGGATA+TGG | 0.298003 | 2.3:-45751986 | MS.gene062117:CDS |
| TGACACTTTCTGGTCTTCCT+TGG | 0.305203 | 2.3:+45756594 | None:intergenic |
| TTAGCTCGATCTCTATATTT+CGG | 0.308153 | 2.3:+45758985 | None:intergenic |
| TACACATTTGGTTAAAGGTT+TGG | 0.319904 | 2.3:-45756815 | MS.gene062117:CDS |
| CATACTCGAACCTTCTTTCC+AGG | 0.320100 | 2.3:+45751273 | None:intergenic |
| AGTTCAGTTTGTTCATAATC+AGG | 0.323683 | 2.3:+45758940 | None:intergenic |
| GACACTTTCTGGTCTTCCTT+GGG | 0.330504 | 2.3:+45756595 | None:intergenic |
| CCAAACTGGAATGCAGCTTT+TGG | 0.334758 | 2.3:+45751447 | None:intergenic |
| CCATAAACAGGTTCAGGTTC+AGG | 0.339144 | 2.3:+45754042 | None:intergenic |
| TGAAGCTGACTTGTCCAAAA+TGG | 0.345502 | 2.3:-45751992 | MS.gene062117:CDS |
| TGCTTCCTTCTGCTCGTTGT+AGG | 0.345545 | 2.3:+45751473 | None:intergenic |
| CATCTCATTTGTCTTGCTAA+TGG | 0.353248 | 2.3:+45756394 | None:intergenic |
| CAAAGGGCCGACTTCATAGA+TGG | 0.366170 | 2.3:-45751524 | MS.gene062117:CDS |
| GGTCCTAAAGAAGAAGAAAA+AGG | 0.371342 | 2.3:-45754729 | MS.gene062117:CDS |
| ATGGTTACAGTTAATGTTGA+TGG | 0.372672 | 2.3:-45754812 | MS.gene062117:CDS |
| CTCCTGGTACCGTTGATATC+AGG | 0.375252 | 2.3:-45758897 | MS.gene062117:intron |
| TCCCCATCGTCCCCAGCATC+TGG | 0.379838 | 2.3:+45756751 | None:intergenic |
| GAAACTTACTTGCGGCGAAT+TGG | 0.381042 | 2.3:+45759144 | None:intergenic |
| CCAAAAGCTGCATTCCAGTT+TGG | 0.383098 | 2.3:-45751447 | MS.gene062117:CDS |
| TTCGGCAATTCTGGTTCCTC+TGG | 0.388090 | 2.3:+45759003 | None:intergenic |
| TTTCATGCTGTTGCTCCTCC+TGG | 0.401020 | 2.3:-45758913 | MS.gene062117:CDS |
| CTTGCATCTTCACACCAAAC+TGG | 0.402836 | 2.3:+45751433 | None:intergenic |
| GATTATGAACAAACTGAACT+TGG | 0.412329 | 2.3:-45758937 | MS.gene062117:CDS |
| ATAGGACCATAAACAGGTTC+AGG | 0.412746 | 2.3:+45754036 | None:intergenic |
| GAGATTAAGAAGCCAGATGC+TGG | 0.428922 | 2.3:-45756763 | MS.gene062117:CDS |
| CGAACCTTCTTTCCAGGGGT+TGG | 0.435893 | 2.3:+45751279 | None:intergenic |
| GATAAGGAAGGTGGCGGTGA+AGG | 0.441150 | 2.3:-45751321 | MS.gene062117:CDS |
| AAGCCAGTTGTTCAGCATAC+TGG | 0.444944 | 2.3:+45752274 | None:intergenic |
| TGATGTGGAGCATACACATT+TGG | 0.448131 | 2.3:-45756827 | MS.gene062117:CDS |
| GTACCAGTATGCTGAACAAC+TGG | 0.454424 | 2.3:-45752277 | MS.gene062117:CDS |
| ATGTCTTCAGAGACAGGACT+TGG | 0.455543 | 2.3:+45754111 | None:intergenic |
| TTCTTCATGGGAGGTGGAGG+TGG | 0.457659 | 2.3:+45754237 | None:intergenic |
| GATGCTGGGGACGATGGGGA+TGG | 0.459699 | 2.3:-45756748 | MS.gene062117:CDS |
| TCGTCTTGGTTCTTCTGGAA+AGG | 0.460660 | 2.3:-45754750 | MS.gene062117:CDS |
| TCTTCCATGTCTTCAGAGAC+AGG | 0.467650 | 2.3:+45754105 | None:intergenic |
| TATGATGATGAGCCAACCCC+TGG | 0.471163 | 2.3:-45751291 | MS.gene062117:CDS |
| AGCCAGATGCTGGGGACGAT+GGG | 0.480317 | 2.3:-45756753 | MS.gene062117:CDS |
| TGGTCCTATCCCACCTGTGA+TGG | 0.486491 | 2.3:-45754022 | MS.gene062117:CDS |
| GATACTCTCAAGAAAGAAGA+TGG | 0.487462 | 2.3:-45751343 | MS.gene062117:CDS |
| AGAATATAACCGTGAGGTAG+TGG | 0.487882 | 2.3:-45752025 | MS.gene062117:CDS |
| GGTACTCCTGCCATTCCCCT+TGG | 0.494602 | 2.3:+45752295 | None:intergenic |
| AGGTGTTAACTATGAGATAC+CGG | 0.495908 | 2.3:-45754139 | MS.gene062117:CDS |
| GTCATAAAGCGTGGATCTTG+TGG | 0.496618 | 2.3:+45752189 | None:intergenic |
| AAGCCAGATGCTGGGGACGA+TGG | 0.497861 | 2.3:-45756754 | MS.gene062117:CDS |
| TGCCATCCTTGATCCATCAC+AGG | 0.501132 | 2.3:+45754009 | None:intergenic |
| ATCCCACCTGTGATGGATCA+AGG | 0.501278 | 2.3:-45754015 | MS.gene062117:CDS |
| CTCAAGAAAGAAGATGGATA+AGG | 0.502536 | 2.3:-45751337 | MS.gene062117:CDS |
| ATATCTTCAGCAAAATATGC+AGG | 0.503384 | 2.3:-45752241 | MS.gene062117:CDS |
| TTACTACGGTGCAAGGTCGT+TGG | 0.503521 | 2.3:+45754945 | None:intergenic |
| ATGCTGGGGACGATGGGGAT+GGG | 0.504232 | 2.3:-45756747 | MS.gene062117:CDS |
| AGTTACTCTGAATGTTACCC+TGG | 0.505676 | 2.3:-45752054 | MS.gene062117:CDS |
| GGAGGTGGAGGTGGAAGGAT+AGG | 0.506939 | 2.3:+45754246 | None:intergenic |
| TGATCCATCACAGGTGGGAT+AGG | 0.507281 | 2.3:+45754018 | None:intergenic |
| GGATCACAAACCTCGGGCAC+TGG | 0.512302 | 2.3:+45754912 | None:intergenic |
| TCAGGTTCAGCGAAATATTG+AGG | 0.516893 | 2.3:+45754060 | None:intergenic |
| TGGCTACCAAGGGGAATGGC+AGG | 0.520971 | 2.3:-45752301 | MS.gene062117:CDS |
| CTGGCAAAGGTTGAAGGTGT+GGG | 0.521083 | 2.3:-45754294 | MS.gene062117:CDS |
| TCTTCTTCTCTAGCAACAGC+TGG | 0.522582 | 2.3:+45754183 | None:intergenic |
| GATAAGCTGGCAAAGGTTGA+AGG | 0.524590 | 2.3:-45754300 | MS.gene062117:CDS |
| GACTTGTCCAAAATGGATAT+GGG | 0.526193 | 2.3:-45751985 | MS.gene062117:CDS |
| AGATCGAGCTAAAGAACGTA+GGG | 0.526893 | 2.3:-45758974 | MS.gene062117:CDS |
| AAGGAAGGTGGCGGTGAAGG+TGG | 0.527665 | 2.3:-45751318 | MS.gene062117:CDS |
| GGTGGGATAGGACCATAAAC+AGG | 0.531676 | 2.3:+45754030 | None:intergenic |
| CGGTTATATTCTTGATACCC+AGG | 0.533605 | 2.3:+45752036 | None:intergenic |
| GCCATGGTTGGTGGCTACCA+AGG | 0.539002 | 2.3:-45752312 | MS.gene062117:CDS |
| AGATTAAGAAGCCAGATGCT+GGG | 0.539905 | 2.3:-45756762 | MS.gene062117:CDS |
| TGAGCCAACCCCTGGAAAGA+AGG | 0.542377 | 2.3:-45751283 | MS.gene062117:CDS |
| ATTATTTCAAGAGAGAATCA+AGG | 0.545022 | 2.3:-45754207 | MS.gene062117:CDS |
| CCAAAATGGATATGGGAGGA+AGG | 0.547579 | 2.3:-45751978 | MS.gene062117:CDS |
| ATAATGTCATACCTTCGTCT+TGG | 0.547711 | 2.3:-45754764 | MS.gene062117:CDS |
| TCATGGGAGGTGGAGGTGGA+AGG | 0.550072 | 2.3:+45754241 | None:intergenic |
| ATATGACAAAGAGGATAAGC+TGG | 0.550265 | 2.3:-45754313 | MS.gene062117:CDS |
| TGTCTTCAGAGACAGGACTT+GGG | 0.551378 | 2.3:+45754112 | None:intergenic |
| CCATGGTTGGTGGCTACCAA+GGG | 0.553628 | 2.3:-45752311 | MS.gene062117:CDS |
| TGTGTATTCTGACAGGCAAA+GGG | 0.556756 | 2.3:-45751540 | MS.gene062117:intron |
| ACTTCAACAGCTGAGGGAGA+AGG | 0.558098 | 2.3:-45752112 | MS.gene062117:CDS |
| AAGTCCTGTCTCTGAAGACA+TGG | 0.563492 | 2.3:-45754109 | MS.gene062117:CDS |
| TACTCGAACCTTCTTTCCAG+GGG | 0.565097 | 2.3:+45751275 | None:intergenic |
| TTTGCTGAAGATATTGATCA+GGG | 0.565710 | 2.3:+45752250 | None:intergenic |
| ATACTCGAACCTTCTTTCCA+GGG | 0.566395 | 2.3:+45751274 | None:intergenic |
| GGATCAAGGATGGCAAGAAA+CGG | 0.567612 | 2.3:-45754001 | MS.gene062117:intron |
| TTTGTCTTGCTAATGGTCTG+TGG | 0.567962 | 2.3:+45756401 | None:intergenic |
| GTCTTCAGAGACAGGACTTG+GGG | 0.568105 | 2.3:+45754113 | None:intergenic |
| GCTGGCAAAGGTTGAAGGTG+TGG | 0.569940 | 2.3:-45754295 | MS.gene062117:CDS |
| ATTGTATTGTTCAGGTGATG+TGG | 0.570568 | 2.3:-45756842 | MS.gene062117:intron |
| CAAACACAAGCCATGGTTGG+TGG | 0.574657 | 2.3:-45752321 | MS.gene062117:CDS |
| AATCCGCACAGCAGTTGCTA+AGG | 0.575449 | 2.3:-45756572 | MS.gene062117:intron |
| TAAATGAATGTCATTCGACC+AGG | 0.575559 | 2.3:+45756365 | None:intergenic |
| TACCTGATATCAACGGTACC+AGG | 0.576314 | 2.3:+45758895 | None:intergenic |
| AAAGGGCCGACTTCATAGAT+GGG | 0.576501 | 2.3:-45751523 | MS.gene062117:CDS |
| CGGGAGACTTCAACAGCTGA+GGG | 0.578563 | 2.3:-45752118 | MS.gene062117:CDS |
| AGCTGATTGTCCAGTGCCCG+AGG | 0.580835 | 2.3:-45754922 | MS.gene062117:intron |
| CTTTATGACTCAAGAGGAGA+AGG | 0.582067 | 2.3:-45752175 | MS.gene062117:CDS |
| CCCTTGGTAGCCACCAACCA+TGG | 0.585931 | 2.3:+45752311 | None:intergenic |
| TTGGTGGCTACCAAGGGGAA+TGG | 0.588510 | 2.3:-45752305 | MS.gene062117:CDS |
| TATTTCAGTCAGTTTATCAG+TGG | 0.592096 | 2.3:-45756433 | MS.gene062117:intron |
| AAGAAGATGGATAAGGAAGG+TGG | 0.594397 | 2.3:-45751330 | MS.gene062117:CDS |
| ACGATGGGGATGGGAAACCC+AGG | 0.594664 | 2.3:-45756738 | MS.gene062117:intron |
| CAAAATCCCATCTATGAAGT+CGG | 0.595159 | 2.3:+45751517 | None:intergenic |
| ATCAGCTTTACTACGGTGCA+AGG | 0.597060 | 2.3:+45754938 | None:intergenic |
| CATCCTTGATCCATCACAGG+TGG | 0.597102 | 2.3:+45754012 | None:intergenic |
| CACCTGTGATGGATCAAGGA+TGG | 0.598804 | 2.3:-45754011 | MS.gene062117:CDS |
| ACGGGAGACTTCAACAGCTG+AGG | 0.600542 | 2.3:-45752119 | MS.gene062117:CDS |
| ACAAATGAGATGTTCCTCCC+TGG | 0.600907 | 2.3:-45756383 | MS.gene062117:CDS |
| CAAAATGGATATGGGAGGAA+GGG | 0.601295 | 2.3:-45751977 | MS.gene062117:intron |
| TCCTCTTGAGTCATAAAGCG+TGG | 0.603489 | 2.3:+45752180 | None:intergenic |
| GGCTACCTACAACGAGCAGA+AGG | 0.613721 | 2.3:-45751478 | MS.gene062117:CDS |
| CTGGACAATCAGCTTTACTA+CGG | 0.614232 | 2.3:+45754931 | None:intergenic |
| GGTTATATTCTTGATACCCA+GGG | 0.614330 | 2.3:+45752037 | None:intergenic |
| GATTAAGAAGCCAGATGCTG+GGG | 0.617123 | 2.3:-45756761 | MS.gene062117:CDS |
| CAAAGAGGATAAGCTGGCAA+AGG | 0.619590 | 2.3:-45754307 | MS.gene062117:CDS |
| GTTACTCTGAATGTTACCCT+GGG | 0.620215 | 2.3:-45752053 | MS.gene062117:CDS |
| GCCAGATGCTGGGGACGATG+GGG | 0.623496 | 2.3:-45756752 | MS.gene062117:CDS |
| TCCACGCTTTATGACTCAAG+AGG | 0.627565 | 2.3:-45752181 | MS.gene062117:CDS |
| GAGATCGAGCTAAAGAACGT+AGG | 0.631640 | 2.3:-45758975 | MS.gene062117:CDS |
| TGTTTAATCTGGTAGGAGAG+CGG | 0.633269 | 2.3:-45754984 | MS.gene062117:intron |
| AGGTCGTTGGAATATCATGA+TGG | 0.636236 | 2.3:+45754958 | None:intergenic |
| TATCTTCAGCAAAATATGCA+GGG | 0.636784 | 2.3:-45752240 | MS.gene062117:CDS |
| AGAAAGAAGATGGATAAGGA+AGG | 0.638817 | 2.3:-45751333 | MS.gene062117:CDS |
| GAAAACCAGAAAGCAAAACA+AGG | 0.641590 | 2.3:-45751403 | MS.gene062117:CDS |
| ATCCTTGATCCATCACAGGT+GGG | 0.641778 | 2.3:+45754013 | None:intergenic |
| ACTCAAGAGGAGAAGGATCG+AGG | 0.649454 | 2.3:-45752168 | MS.gene062117:CDS |
| TGGCAAAGGTTGAAGGTGTG+GGG | 0.651053 | 2.3:-45754293 | MS.gene062117:CDS |
| CATCACTGTCCACTACCTCA+CGG | 0.651738 | 2.3:+45752016 | None:intergenic |
| AAGATGGATAAGGAAGGTGG+CGG | 0.660086 | 2.3:-45751327 | MS.gene062117:CDS |
| GAAACTTTACCTGATATCAA+CGG | 0.665174 | 2.3:+45758888 | None:intergenic |
| TTGTCCAAAATGGATATGGG+AGG | 0.666128 | 2.3:-45751982 | MS.gene062117:CDS |
| TTTGGTGTGAAGATGCAAGA+TGG | 0.667200 | 2.3:-45751429 | MS.gene062117:CDS |
| TGGTAATGGATATGACAAAG+AGG | 0.672903 | 2.3:-45754322 | MS.gene062117:CDS |
| GTGTGAAGATGCAAGATGGT+CGG | 0.674279 | 2.3:-45751425 | MS.gene062117:CDS |
| TCTTCAGAGACAGGACTTGG+GGG | 0.681769 | 2.3:+45754114 | None:intergenic |
| ATTGAGAAGAGCAAGTACCT+CGG | 0.682783 | 2.3:-45758760 | MS.gene062117:CDS |
| GAACCTTAGCAACTGCTGTG+CGG | 0.684421 | 2.3:+45756569 | None:intergenic |
| ATGCAAACACAAGCCATGGT+TGG | 0.685017 | 2.3:-45752324 | MS.gene062117:CDS |
| AAATGAATGTCATTCGACCA+GGG | 0.685498 | 2.3:+45756366 | None:intergenic |
| TGTAATGCAAACACAAGCCA+TGG | 0.686530 | 2.3:-45752328 | MS.gene062117:CDS |
| GGTGTTAACTATGAGATACC+GGG | 0.692727 | 2.3:-45754138 | MS.gene062117:CDS |
| CATGGTTGGTGGCTACCAAG+GGG | 0.707037 | 2.3:-45752310 | MS.gene062117:CDS |
| TTCCAGAAGAACCAAGACGA+AGG | 0.720529 | 2.3:+45754753 | None:intergenic |
| GAGAAGAGCAAGTACCTCGG+AGG | 0.728646 | 2.3:-45758757 | MS.gene062117:intron |
| CTGATATCAACGGTACCAGG+AGG | 0.732385 | 2.3:+45758898 | None:intergenic |
| GTACAGGGAAGAGAAACCAG+AGG | 0.733333 | 2.3:-45759019 | MS.gene062117:intron |
| AAGTACAAGACGAACCTCCG+AGG | 0.739210 | 2.3:+45758743 | None:intergenic |
| GTATCAAGAATATAACCGTG+AGG | 0.769653 | 2.3:-45752031 | MS.gene062117:CDS |
| TGAATGTCATTCGACCAGGG+AGG | 0.782114 | 2.3:+45756369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 45751272 | 45759199 | 45751272 | ID=MS.gene062117 |
| chr2.3 | mRNA | 45751272 | 45759199 | 45751272 | ID=MS.gene062117.t1;Parent=MS.gene062117 |
| chr2.3 | exon | 45759153 | 45759199 | 45759153 | ID=MS.gene062117.t1.exon1;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45759153 | 45759199 | 45759153 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45758898 | 45759035 | 45758898 | ID=MS.gene062117.t1.exon2;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45758898 | 45759035 | 45758898 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45758758 | 45758807 | 45758758 | ID=MS.gene062117.t1.exon3;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45758758 | 45758807 | 45758758 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45756739 | 45756850 | 45756739 | ID=MS.gene062117.t1.exon4;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45756739 | 45756850 | 45756739 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45756573 | 45756621 | 45756573 | ID=MS.gene062117.t1.exon5;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45756573 | 45756621 | 45756573 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45756358 | 45756447 | 45756358 | ID=MS.gene062117.t1.exon6;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45756358 | 45756447 | 45756358 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45754923 | 45754991 | 45754923 | ID=MS.gene062117.t1.exon7;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45754923 | 45754991 | 45754923 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45754714 | 45754837 | 45754714 | ID=MS.gene062117.t1.exon8;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45754714 | 45754837 | 45754714 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45754002 | 45754360 | 45754002 | ID=MS.gene062117.t1.exon9;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45754002 | 45754360 | 45754002 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45751978 | 45752361 | 45751978 | ID=MS.gene062117.t1.exon10;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45751978 | 45752361 | 45751978 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| chr2.3 | exon | 45751272 | 45751547 | 45751272 | ID=MS.gene062117.t1.exon11;Parent=MS.gene062117.t1 |
| chr2.3 | CDS | 45751272 | 45751547 | 45751272 | ID=cds.MS.gene062117.t1;Parent=MS.gene062117.t1 |
| Gene Sequence |
| Protein sequence |
