Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06324.t1 | XP_013461634.1 | 94.1 | 456 | 26 | 1 | 1 | 456 | 1 | 455 | 1.80E-218 | 768.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06324.t1 | Q9FGN8 | 40.9 | 193 | 97 | 2 | 117 | 292 | 304 | 496 | 2.2e-31 | 138.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06324.t1 | A0A072V0W9 | 94.1 | 456 | 26 | 1 | 1 | 456 | 1 | 455 | 1.3e-218 | 768.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene06324 | 0.848158 | 7.33E-60 | -1.69E-46 |
| MS.gene049178 | MS.gene06324 | 0.837147 | 6.17E-57 | -1.69E-46 |
| MS.gene049208 | MS.gene06324 | 0.909535 | 5.12E-82 | -1.69E-46 |
| MS.gene049264 | MS.gene06324 | 0.805603 | 1.23E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene06324 | 0.807831 | 4.17E-50 | -1.69E-46 |
| MS.gene049368 | MS.gene06324 | 0.829461 | 5.08E-55 | -1.69E-46 |
| MS.gene049786 | MS.gene06324 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene050253 | MS.gene06324 | 0.803078 | 4.14E-49 | -1.69E-46 |
| MS.gene050386 | MS.gene06324 | 0.802309 | 5.96E-49 | -1.69E-46 |
| MS.gene050439 | MS.gene06324 | 0.839978 | 1.15E-57 | -1.69E-46 |
| MS.gene050556 | MS.gene06324 | 0.805146 | 1.54E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene06324 | 0.811513 | 6.74E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene06324 | 0.81376 | 2.17E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene06324 | 0.831256 | 1.85E-55 | -1.69E-46 |
| MS.gene051343 | MS.gene06324 | 0.827703 | 1.35E-54 | -1.69E-46 |
| MS.gene051676 | MS.gene06324 | 0.840889 | 6.63E-58 | -1.69E-46 |
| MS.gene051700 | MS.gene06324 | 0.809731 | 1.64E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene06324 | 0.868308 | 7.19E-66 | -1.69E-46 |
| MS.gene052307 | MS.gene06324 | 0.820309 | 7.34E-53 | -1.69E-46 |
| MS.gene052335 | MS.gene06324 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene052342 | MS.gene06324 | 0.805771 | 1.14E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene06324 | 0.816676 | 4.89E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene06324 | 0.845801 | 3.24E-59 | -1.69E-46 |
| MS.gene052932 | MS.gene06324 | 0.814678 | 1.36E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene06324 | 0.816454 | 5.48E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene06324 | 0.801889 | 7.28E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene06324 | 0.803279 | 3.76E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene06324 | 0.820776 | 5.74E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene06324 | 0.805681 | 1.19E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene06324 | 0.81586 | 7.45E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene06324 | 0.832715 | 8.07E-56 | -1.69E-46 |
| MS.gene055311 | MS.gene06324 | 0.962436 | 7.09E-121 | -1.69E-46 |
| MS.gene055313 | MS.gene06324 | 0.987409 | 3.74E-170 | -1.69E-46 |
| MS.gene055314 | MS.gene06324 | 0.947131 | 1.22E-105 | -1.69E-46 |
| MS.gene055469 | MS.gene06324 | 0.810537 | 1.10E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene06324 | 0.858731 | 6.74E-63 | -1.69E-46 |
| MS.gene055603 | MS.gene06324 | 0.815321 | 9.81E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene06324 | 0.808691 | 2.73E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene06324 | 0.854811 | 9.60E-62 | -1.69E-46 |
| MS.gene056181 | MS.gene06324 | 0.851897 | 6.58E-61 | -1.69E-46 |
| MS.gene056308 | MS.gene06324 | 0.811551 | 6.62E-51 | -1.69E-46 |
| MS.gene056390 | MS.gene06324 | 0.833909 | 4.07E-56 | -1.69E-46 |
| MS.gene056403 | MS.gene06324 | 0.808214 | 3.46E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene06324 | 0.802675 | 5.01E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene06324 | 0.815327 | 9.78E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene06324 | 0.833447 | 5.31E-56 | -1.69E-46 |
| MS.gene057360 | MS.gene06324 | 0.853245 | 2.71E-61 | -1.69E-46 |
| MS.gene057915 | MS.gene06324 | 0.832669 | 8.28E-56 | -1.69E-46 |
| MS.gene058289 | MS.gene06324 | 0.805742 | 1.15E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene06324 | 0.822038 | 2.93E-53 | -1.69E-46 |
| MS.gene058639 | MS.gene06324 | 0.836052 | 1.17E-56 | -1.69E-46 |
| MS.gene058758 | MS.gene06324 | 0.827547 | 1.47E-54 | -1.69E-46 |
| MS.gene058852 | MS.gene06324 | 0.805672 | 1.19E-49 | -1.69E-46 |
| MS.gene059144 | MS.gene06324 | 0.81823 | 2.18E-52 | -1.69E-46 |
| MS.gene059170 | MS.gene06324 | 0.802746 | 4.85E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene06324 | 0.837222 | 5.90E-57 | -1.69E-46 |
| MS.gene059227 | MS.gene06324 | 0.806883 | 6.63E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene06324 | 0.80748 | 4.95E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene06324 | 0.805489 | 1.30E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene06324 | 0.832867 | 7.40E-56 | -1.69E-46 |
| MS.gene059965 | MS.gene06324 | 0.828948 | 6.77E-55 | -1.69E-46 |
| MS.gene06010 | MS.gene06324 | 0.826637 | 2.43E-54 | -1.69E-46 |
| MS.gene060127 | MS.gene06324 | 0.800973 | 1.12E-48 | -1.69E-46 |
| MS.gene060191 | MS.gene06324 | 0.809933 | 1.48E-50 | -1.69E-46 |
| MS.gene060296 | MS.gene06324 | 0.803886 | 2.81E-49 | -1.69E-46 |
| MS.gene060380 | MS.gene06324 | 0.801717 | 7.89E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene06324 | 0.813965 | 1.96E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene06324 | 0.807982 | 3.87E-50 | -1.69E-46 |
| MS.gene060869 | MS.gene06324 | 0.837982 | 3.77E-57 | -1.69E-46 |
| MS.gene060870 | MS.gene06324 | 0.835733 | 1.41E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene06324 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene06324 | 0.814784 | 1.29E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06324.t1 | MTR_3g097570 | 97.149 | 456 | 12 | 1 | 1 | 456 | 1 | 455 | 0.0 | 915 |
| MS.gene06324.t1 | MTR_8g446550 | 42.654 | 211 | 111 | 2 | 107 | 316 | 321 | 522 | 8.17e-45 | 166 |
| MS.gene06324.t1 | MTR_7g105920 | 46.354 | 192 | 95 | 4 | 108 | 292 | 265 | 455 | 2.54e-43 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06324.t1 | AT5G23610 | 37.736 | 371 | 199 | 6 | 108 | 452 | 124 | 488 | 3.95e-77 | 249 |
| MS.gene06324.t1 | AT5G23610 | 37.634 | 372 | 199 | 6 | 108 | 452 | 124 | 489 | 5.58e-77 | 249 |
| MS.gene06324.t1 | AT5G51330 | 43.842 | 203 | 97 | 2 | 107 | 292 | 290 | 492 | 4.61e-45 | 166 |
| MS.gene06324.t1 | AT5G51330 | 43.842 | 203 | 97 | 2 | 107 | 292 | 294 | 496 | 5.16e-45 | 166 |
Find 132 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTGCAGGAGATGTTTA+TGG | 0.210272 | 3.1:+77756528 | MS.gene06324:intron |
| CAACTCGTTGATAATGTTTC+AGG | 0.243745 | 3.1:+77756426 | MS.gene06324:CDS |
| TTACTATCTGGAAAATATAT+TGG | 0.261036 | 3.1:-77754786 | None:intergenic |
| AAGTTCAGTACTTCTTCATT+TGG | 0.283704 | 3.1:-77755470 | None:intergenic |
| CTTAGTACAGGTCGGGTTAT+TGG | 0.284312 | 3.1:-77755162 | None:intergenic |
| CGTAAATACATCGGTGATAC+TGG | 0.287030 | 3.1:+77755195 | MS.gene06324:CDS |
| TCCCTCCAGGTGCCACTTTA+CGG | 0.303889 | 3.1:-77755248 | None:intergenic |
| GTTCAACCCTGACGGAATTA+TGG | 0.307173 | 3.1:+77755290 | MS.gene06324:CDS |
| CAGTATCACCGATGTATTTA+CGG | 0.324775 | 3.1:-77755194 | None:intergenic |
| GATGACGTCCGCGAGGAGGC+TGG | 0.343634 | 3.1:+77755339 | MS.gene06324:CDS |
| CATCGTCAACAGGCATTCAT+TGG | 0.346643 | 3.1:+77754678 | MS.gene06324:CDS |
| TGAAGTGGAGCAACATCTTA+TGG | 0.347796 | 3.1:+77755937 | MS.gene06324:CDS |
| GTATATTAACAGGGCAAGTA+TGG | 0.358640 | 3.1:+77755893 | MS.gene06324:intron |
| GGATACCACCATCCACTGTT+AGG | 0.358688 | 3.1:+77755379 | MS.gene06324:CDS |
| TTAACAGTTGTAGAAGAATC+TGG | 0.359007 | 3.1:-77756385 | None:intergenic |
| TCTTCATTGAGTGGCTGAAT+TGG | 0.364573 | 3.1:-77756160 | None:intergenic |
| CCGTCATCCTGAGTATTGTC+TGG | 0.369164 | 3.1:-77756058 | None:intergenic |
| GGTTGATCCTCTTGCATTGT+GGG | 0.373824 | 3.1:-77756352 | None:intergenic |
| GTGGATGGTGGTATCCAATA+GGG | 0.379280 | 3.1:-77755372 | None:intergenic |
| TTAGTACAGGTCGGGTTATT+GGG | 0.379451 | 3.1:-77755161 | None:intergenic |
| CTGGGGTTGATGACCCCTAT+TGG | 0.380387 | 3.1:+77755358 | MS.gene06324:CDS |
| AGTTCAGTACTTCTTCATTT+GGG | 0.387011 | 3.1:-77755469 | None:intergenic |
| GGCCATCCGTGCCCCTTGTC+AGG | 0.402712 | 3.1:+77755401 | MS.gene06324:CDS |
| GGATTCTTTGAAGAATTTGC+AGG | 0.406927 | 3.1:+77755771 | MS.gene06324:CDS |
| GAAGAATCTGGGGTGACATT+AGG | 0.411888 | 3.1:-77756373 | None:intergenic |
| GATGTATCAAACACTGTATA+TGG | 0.414656 | 3.1:+77756592 | MS.gene06324:CDS |
| ATTCAAATGGAAAGAAAAGA+TGG | 0.422345 | 3.1:+77756555 | MS.gene06324:CDS |
| CGTCAGGGTTGAACCATCTT+CGG | 0.426408 | 3.1:-77755281 | None:intergenic |
| AGTGGATGGTGGTATCCAAT+AGG | 0.428009 | 3.1:-77755373 | None:intergenic |
| AGTATGGTGAGTTCGCGATA+TGG | 0.430148 | 3.1:+77755909 | MS.gene06324:CDS |
| GAGAAAGAAGCATGACAGTA+AGG | 0.439317 | 3.1:+77754956 | MS.gene06324:CDS |
| GAAACTGCTTAAAATAGAAA+TGG | 0.441793 | 3.1:+77755446 | MS.gene06324:CDS |
| AGGATGACGGATTGGCAACT+TGG | 0.448641 | 3.1:+77756071 | MS.gene06324:CDS |
| TGTTTATGGATTTATTCAAA+TGG | 0.448971 | 3.1:+77756542 | MS.gene06324:CDS |
| AGCTGCAGGGATGGATAGGT+GGG | 0.450023 | 3.1:+77754650 | None:intergenic |
| CGGAATTATGGAGTATTGGT+TGG | 0.461416 | 3.1:+77755302 | MS.gene06324:CDS |
| TTTGGATAGCAGAGATATGC+AGG | 0.462744 | 3.1:+77755554 | MS.gene06324:intron |
| CTGACGGAATTATGGAGTAT+TGG | 0.463406 | 3.1:+77755298 | MS.gene06324:CDS |
| GTGGGAGGTGCTGAAGGCAG+AGG | 0.464284 | 3.1:+77755122 | MS.gene06324:CDS |
| ATGACGTCCGCGAGGAGGCT+GGG | 0.464713 | 3.1:+77755340 | MS.gene06324:CDS |
| CAATACTCCATAATTCCGTC+AGG | 0.466213 | 3.1:-77755297 | None:intergenic |
| CTAAAAGTGGTGCACTCTCT+TGG | 0.466483 | 3.1:-77755992 | None:intergenic |
| CAACCGCCTAACTGAAATCA+TGG | 0.467995 | 3.1:+77755750 | MS.gene06324:CDS |
| GTGGGGTGTTCATCGTCAAC+AGG | 0.476341 | 3.1:+77754668 | MS.gene06324:CDS |
| ACCTCAATAAGCTGACCATA+AGG | 0.476397 | 3.1:-77754891 | None:intergenic |
| AGTATCACCGATGTATTTAC+GGG | 0.476913 | 3.1:-77755193 | None:intergenic |
| GAGCTGCAGGGATGGATAGG+TGG | 0.485530 | 3.1:+77754649 | None:intergenic |
| AAGAATCCATGATTTCAGTT+AGG | 0.487830 | 3.1:-77755756 | None:intergenic |
| TGGGAGGTGCTGAAGGCAGA+GGG | 0.492323 | 3.1:+77755123 | MS.gene06324:CDS |
| TAACAGTTGTAGAAGAATCT+GGG | 0.496287 | 3.1:-77756384 | None:intergenic |
| AGCTGATCTTAGTACAGGTC+GGG | 0.496477 | 3.1:-77755169 | None:intergenic |
| AGCATGACAGTAAGGATAGA+TGG | 0.497539 | 3.1:+77754964 | MS.gene06324:CDS |
| GGACTGATCGGTTCCGAAGA+TGG | 0.500965 | 3.1:+77755268 | MS.gene06324:CDS |
| GCCTTATGGTCAGCTTATTG+AGG | 0.505640 | 3.1:+77754890 | MS.gene06324:CDS |
| TGACGTCCGCGAGGAGGCTG+GGG | 0.505696 | 3.1:+77755341 | MS.gene06324:CDS |
| AGGTTGATCCTCTTGCATTG+TGG | 0.510835 | 3.1:-77756353 | None:intergenic |
| TTGGTTGGAGAGGGCTGACT+TGG | 0.513352 | 3.1:+77755317 | MS.gene06324:CDS |
| ATCCTGACAAGGGGCACGGA+TGG | 0.514234 | 3.1:-77755403 | None:intergenic |
| TTAGTCAGTTCTTCATTGAG+TGG | 0.514458 | 3.1:-77756169 | None:intergenic |
| GAGGTGAAAGAGGAGTATGC+TGG | 0.516120 | 3.1:+77754909 | MS.gene06324:CDS |
| GAAGAATCAGCATCCTGACA+AGG | 0.520021 | 3.1:-77755414 | None:intergenic |
| TTAGAGCTGCAGGGATGGAT+AGG | 0.521038 | 3.1:+77754646 | None:intergenic |
| GTCAACAGGCATTCATTGGT+TGG | 0.523113 | 3.1:+77754682 | MS.gene06324:CDS |
| TTCTGTTACTAGGAAGGAAG+AGG | 0.524484 | 3.1:+77754722 | MS.gene06324:CDS |
| GACGGATTGGCAACTTGGAT+AGG | 0.527728 | 3.1:+77756076 | MS.gene06324:CDS |
| CTGAATTGGCATGCCTGAGT+AGG | 0.528503 | 3.1:-77756146 | None:intergenic |
| TTCTACAACTGTTAATTCAA+AGG | 0.528922 | 3.1:+77756393 | MS.gene06324:CDS |
| GGTCAATGTGCTTCAGTAAG+TGG | 0.534563 | 3.1:-77755227 | None:intergenic |
| CGGGCAGCTGATCTTAGTAC+AGG | 0.536563 | 3.1:-77755174 | None:intergenic |
| GAAGCTTAGAGAGGTGAAAG+AGG | 0.537563 | 3.1:+77754866 | MS.gene06324:CDS |
| TTGAAATAATAGTCATGTTG+AGG | 0.537928 | 3.1:+77756321 | MS.gene06324:intron |
| CAGCTGATCTTAGTACAGGT+CGG | 0.541011 | 3.1:-77755170 | None:intergenic |
| ACGGATTGGCAACTTGGATA+GGG | 0.541184 | 3.1:+77756077 | MS.gene06324:CDS |
| AAGCATGTGGGAGGTGCTGA+AGG | 0.543073 | 3.1:+77755116 | MS.gene06324:CDS |
| TTTCTTGAAGATCCCTACTC+AGG | 0.547860 | 3.1:+77756133 | MS.gene06324:CDS |
| TCACCTCTCTAAGCTGACTA+AGG | 0.547878 | 3.1:-77754827 | None:intergenic |
| AAAGATGGAGCAGCAGCTGT+TGG | 0.548685 | 3.1:+77756570 | MS.gene06324:CDS |
| TTCTGAAGGAGGACTAAAAG+TGG | 0.548840 | 3.1:-77756005 | None:intergenic |
| GATACCACCATCCACTGTTA+GGG | 0.550025 | 3.1:+77755380 | MS.gene06324:CDS |
| GAAAACTGAAAGTAACATGA+TGG | 0.552332 | 3.1:+77755599 | MS.gene06324:CDS |
| GGAGGTGCTGAAGGCAGAGG+GGG | 0.552568 | 3.1:+77755125 | MS.gene06324:CDS |
| TATGGAGTATTGGTTGGAGA+GGG | 0.553818 | 3.1:+77755308 | MS.gene06324:CDS |
| AGGTGAAAGAGGAGTATGCT+GGG | 0.555325 | 3.1:+77754910 | MS.gene06324:CDS |
| CGGAACCGATCAGTCCCTCC+AGG | 0.556285 | 3.1:-77755261 | None:intergenic |
| CTCTAAGCTGACTAAGGCTG+AGG | 0.562519 | 3.1:-77754821 | None:intergenic |
| GCAGGAGCTCATTGCCCAGA+AGG | 0.562853 | 3.1:+77755572 | MS.gene06324:CDS |
| AAGAACTGACTAACAAGAAG+AGG | 0.565105 | 3.1:+77756179 | MS.gene06324:CDS |
| GAAGCACATTGACCGTAAAG+TGG | 0.570384 | 3.1:+77755236 | MS.gene06324:CDS |
| TGAATTGGCATGCCTGAGTA+GGG | 0.572022 | 3.1:-77756145 | None:intergenic |
| CGCGATATGGAAAACTGAAG+TGG | 0.573314 | 3.1:+77755922 | MS.gene06324:CDS |
| TCAGCTTATTGAGGTGAAAG+AGG | 0.574832 | 3.1:+77754899 | MS.gene06324:CDS |
| AATCCATGATTTCAGTTAGG+CGG | 0.575656 | 3.1:-77755753 | None:intergenic |
| TGGCACCTGGAGGGACTGAT+CGG | 0.577271 | 3.1:+77755256 | MS.gene06324:CDS |
| CGTCATCCTGAGTATTGTCT+GGG | 0.578265 | 3.1:-77756057 | None:intergenic |
| CGAAGATGGTTCAACCCTGA+CGG | 0.579824 | 3.1:+77755282 | MS.gene06324:CDS |
| TACTAGGAAGGAAGAGGACT+CGG | 0.580045 | 3.1:+77754728 | MS.gene06324:CDS |
| CTTGGATGACGTCCGCGAGG+AGG | 0.584682 | 3.1:+77755335 | MS.gene06324:CDS |
| CAGCATCCTGACAAGGGGCA+CGG | 0.588448 | 3.1:-77755407 | None:intergenic |
| CAATACTCAGGATGACGGAT+TGG | 0.588917 | 3.1:+77756063 | MS.gene06324:CDS |
| CGGATGGCCCTAACAGTGGA+TGG | 0.589422 | 3.1:-77755387 | None:intergenic |
| CTTGCAAGGAACTTATGAAG+TGG | 0.591648 | 3.1:+77755713 | MS.gene06324:CDS |
| TCTTCAAGAAAACACTCTTG+TGG | 0.592785 | 3.1:-77756121 | None:intergenic |
| TCTTCCTTCCTAGTAACAGA+AGG | 0.594292 | 3.1:-77754720 | None:intergenic |
| TTATGGAGTATTGGTTGGAG+AGG | 0.594798 | 3.1:+77755307 | MS.gene06324:CDS |
| ACCGTAAAGTGGCACCTGGA+GGG | 0.600671 | 3.1:+77755247 | MS.gene06324:CDS |
| GAGGTGAAAGAGGAGCCTTA+TGG | 0.602537 | 3.1:+77754876 | MS.gene06324:CDS |
| AGGATAGATGGTCAAGCGAG+AGG | 0.602598 | 3.1:+77754976 | MS.gene06324:CDS |
| CAGCCTTAGTCAGCTTAGAG+AGG | 0.603304 | 3.1:+77754824 | MS.gene06324:CDS |
| CACTAACCCAGACAATACTC+AGG | 0.613204 | 3.1:+77756051 | MS.gene06324:CDS |
| AAGAATCAGCATCCTGACAA+GGG | 0.613306 | 3.1:-77755413 | None:intergenic |
| GGCACGGATGGCCCTAACAG+TGG | 0.626312 | 3.1:-77755391 | None:intergenic |
| ATTGACCGTAAAGTGGCACC+TGG | 0.626391 | 3.1:+77755243 | MS.gene06324:CDS |
| GCTGATACCCACAATGCAAG+AGG | 0.632260 | 3.1:+77756345 | MS.gene06324:CDS |
| ACTCTAATGTAGGTACAAGT+CGG | 0.634040 | 3.1:+77755086 | MS.gene06324:intron |
| CCAGACAATACTCAGGATGA+CGG | 0.639358 | 3.1:+77756058 | MS.gene06324:CDS |
| AACAGTTGTAGAAGAATCTG+GGG | 0.639407 | 3.1:-77756383 | None:intergenic |
| TGGATGGTGGTATCCAATAG+GGG | 0.643639 | 3.1:-77755371 | None:intergenic |
| AGTCGGCTGAACAAAGCATG+TGG | 0.643899 | 3.1:+77755103 | MS.gene06324:CDS |
| GTCGGCTGAACAAAGCATGT+GGG | 0.649689 | 3.1:+77755104 | MS.gene06324:CDS |
| GTCTTGTGAGAAGCTTAGAG+AGG | 0.651620 | 3.1:+77754857 | MS.gene06324:CDS |
| GGCTGAACAAAGCATGTGGG+AGG | 0.654214 | 3.1:+77755107 | MS.gene06324:CDS |
| AACTGAAAGTAACATGATGG+AGG | 0.656525 | 3.1:+77755602 | MS.gene06324:CDS |
| TCAGCTGCCCGTAAATACAT+CGG | 0.660244 | 3.1:+77755186 | MS.gene06324:CDS |
| CATCAACCCCAGCCTCCTCG+CGG | 0.661718 | 3.1:-77755347 | None:intergenic |
| AGAATCAGCATCCTGACAAG+GGG | 0.662008 | 3.1:-77755412 | None:intergenic |
| GGGAGGTGCTGAAGGCAGAG+GGG | 0.662463 | 3.1:+77755124 | MS.gene06324:CDS |
| GACCGTAAAGTGGCACCTGG+AGG | 0.665408 | 3.1:+77755246 | MS.gene06324:CDS |
| AATACTCCATAATTCCGTCA+GGG | 0.681790 | 3.1:-77755296 | None:intergenic |
| TCAATGGCAGAAGACTTGCA+AGG | 0.688837 | 3.1:+77755699 | MS.gene06324:intron |
| GCTGCAGGGATGGATAGGTG+GGG | 0.693071 | 3.1:+77754651 | None:intergenic |
| ATGGCCCTAACAGTGGATGG+TGG | 0.700088 | 3.1:-77755384 | None:intergenic |
| TGACTTGGATGACGTCCGCG+AGG | 0.712793 | 3.1:+77755332 | MS.gene06324:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCCTAATAATTTTATT+TGG | + | chr3.1:77755536-77755555 | MS.gene06324:intron | 10.0% |
| !! | ATTAACTCTATATAATTACT+TGG | - | chr3.1:77755061-77755080 | None:intergenic | 15.0% |
| !! | GTATATATTCAAGATTTAAT+GGG | + | chr3.1:77755793-77755812 | MS.gene06324:intron | 15.0% |
| !!! | TGAATGCTTTAATATTTTAA+TGG | + | chr3.1:77755632-77755651 | MS.gene06324:intron | 15.0% |
| !! | AATAGATCATGAATATAAGA+AGG | - | chr3.1:77756505-77756524 | None:intergenic | 20.0% |
| !! | GCTATCCAAATAAAATTATT+AGG | - | chr3.1:77755544-77755563 | None:intergenic | 20.0% |
| !! | GGTATATATTCAAGATTTAA+TGG | + | chr3.1:77755792-77755811 | MS.gene06324:intron | 20.0% |
| !! | TGTTTATGGATTTATTCAAA+TGG | + | chr3.1:77756542-77756561 | MS.gene06324:CDS | 20.0% |
| !! | TTACTATCTGGAAAATATAT+TGG | - | chr3.1:77754789-77754808 | None:intergenic | 20.0% |
| !!! | AAATTAACTTTTTTCCTTCT+TGG | - | chr3.1:77756277-77756296 | None:intergenic | 20.0% |
| ! | AACTCTATATAATTACTTGG+TGG | - | chr3.1:77755058-77755077 | None:intergenic | 25.0% |
| ! | ATTCAAATGGAAAGAAAAGA+TGG | + | chr3.1:77756555-77756574 | MS.gene06324:CDS | 25.0% |
| ! | CAACATGACTATTATTTCAA+AGG | - | chr3.1:77756321-77756340 | None:intergenic | 25.0% |
| ! | GAAACTGCTTAAAATAGAAA+TGG | + | chr3.1:77755446-77755465 | MS.gene06324:CDS | 25.0% |
| ! | TGCTTTATGTTGAATTTCAA+TGG | + | chr3.1:77755683-77755702 | MS.gene06324:intron | 25.0% |
| ! | TTCTACAACTGTTAATTCAA+AGG | + | chr3.1:77756393-77756412 | MS.gene06324:CDS | 25.0% |
| ! | TTGAAATAATAGTCATGTTG+AGG | + | chr3.1:77756321-77756340 | MS.gene06324:intron | 25.0% |
| !! | ATTTTCCAGATAGTAAGAAA+AGG | + | chr3.1:77754793-77754812 | MS.gene06324:CDS | 25.0% |
| !!! | TGATCTATTATTTTTCTTGC+AGG | + | chr3.1:77756516-77756535 | MS.gene06324:intron | 25.0% |
| AAGAATCCATGATTTCAGTT+AGG | - | chr3.1:77755759-77755778 | None:intergenic | 30.0% | |
| AAGGAAAAAATGGGAATAAG+TGG | - | chr3.1:77756476-77756495 | None:intergenic | 30.0% | |
| AAGTTCAGTACTTCTTCATT+TGG | - | chr3.1:77755473-77755492 | None:intergenic | 30.0% | |
| AGATCATGAATATAAGAAGG+TGG | - | chr3.1:77756502-77756521 | None:intergenic | 30.0% | |
| AGTTCAGTACTTCTTCATTT+GGG | - | chr3.1:77755472-77755491 | None:intergenic | 30.0% | |
| CCTGTTAATATACAGAACTA+CGG | - | chr3.1:77755886-77755905 | None:intergenic | 30.0% | |
| CTTCAGAAAAATGGAAAGAT+TGG | + | chr3.1:77756020-77756039 | MS.gene06324:CDS | 30.0% | |
| GAAAACTGAAAGTAACATGA+TGG | + | chr3.1:77755599-77755618 | MS.gene06324:CDS | 30.0% | |
| GATGTATCAAACACTGTATA+TGG | + | chr3.1:77756592-77756611 | MS.gene06324:CDS | 30.0% | |
| GGAGAAATCAAACAAACAAA+AGG | - | chr3.1:77755842-77755861 | None:intergenic | 30.0% | |
| TAACAGTTGTAGAAGAATCT+GGG | - | chr3.1:77756387-77756406 | None:intergenic | 30.0% | |
| TAAGTCAGATATCACATAAG+TGG | - | chr3.1:77755863-77755882 | None:intergenic | 30.0% | |
| TTAACAGTTGTAGAAGAATC+TGG | - | chr3.1:77756388-77756407 | None:intergenic | 30.0% | |
| TTAATCATGCACTCTAATGT+AGG | + | chr3.1:77755076-77755095 | MS.gene06324:intron | 30.0% | |
| ! | CGTAGTTCTGTATATTAACA+GGG | + | chr3.1:77755884-77755903 | MS.gene06324:intron | 30.0% |
| ! | TTCAGTTTTCTTTTCCTTCT+GGG | - | chr3.1:77755589-77755608 | None:intergenic | 30.0% |
| ! | TTTCAGTTTTCTTTTCCTTC+TGG | - | chr3.1:77755590-77755609 | None:intergenic | 30.0% |
| !! | CAATCTTTCCATTTTTCTGA+AGG | - | chr3.1:77756022-77756041 | None:intergenic | 30.0% |
| AACAGTTGTAGAAGAATCTG+GGG | - | chr3.1:77756386-77756405 | None:intergenic | 35.0% | |
| AACTGAAAGTAACATGATGG+AGG | + | chr3.1:77755602-77755621 | MS.gene06324:CDS | 35.0% | |
| AAGAACTGACTAACAAGAAG+AGG | + | chr3.1:77756179-77756198 | MS.gene06324:CDS | 35.0% | |
| AAGGTGGTAGAAGGAAAAAA+TGG | - | chr3.1:77756486-77756505 | None:intergenic | 35.0% | |
| AATACTCCATAATTCCGTCA+GGG | - | chr3.1:77755299-77755318 | None:intergenic | 35.0% | |
| AATCCATGATTTCAGTTAGG+CGG | - | chr3.1:77755756-77755775 | None:intergenic | 35.0% | |
| ACTCTAATGTAGGTACAAGT+CGG | + | chr3.1:77755086-77755105 | MS.gene06324:intron | 35.0% | |
| AGGTGGTAGAAGGAAAAAAT+GGG | - | chr3.1:77756485-77756504 | None:intergenic | 35.0% | |
| AGTATCACCGATGTATTTAC+GGG | - | chr3.1:77755196-77755215 | None:intergenic | 35.0% | |
| CAGTATCACCGATGTATTTA+CGG | - | chr3.1:77755197-77755216 | None:intergenic | 35.0% | |
| GAATATAAGAAGGTGGTAGA+AGG | - | chr3.1:77756495-77756514 | None:intergenic | 35.0% | |
| GTATATTAACAGGGCAAGTA+TGG | + | chr3.1:77755893-77755912 | MS.gene06324:intron | 35.0% | |
| TCTTCAAGAAAACACTCTTG+TGG | - | chr3.1:77756124-77756143 | None:intergenic | 35.0% | |
| TTAGTCAGTTCTTCATTGAG+TGG | - | chr3.1:77756172-77756191 | None:intergenic | 35.0% | |
| TTAGTCCTCCTTCAGAAAAA+TGG | + | chr3.1:77756011-77756030 | MS.gene06324:CDS | 35.0% | |
| TTTCTTGCAGGAGATGTTTA+TGG | + | chr3.1:77756528-77756547 | MS.gene06324:intron | 35.0% | |
| ! | CCGTAGTTCTGTATATTAAC+AGG | + | chr3.1:77755883-77755902 | MS.gene06324:intron | 35.0% |
| ! | GGATTCTTTGAAGAATTTGC+AGG | + | chr3.1:77755771-77755790 | MS.gene06324:CDS | 35.0% |
| ! | GTTCTTTTCCTTCTGTTACT+AGG | + | chr3.1:77754712-77754731 | MS.gene06324:CDS | 35.0% |
| ! | TTTTCCTTCTGTTACTAGGA+AGG | + | chr3.1:77754716-77754735 | MS.gene06324:CDS | 35.0% |
| !! | CAACTCGTTGATAATGTTTC+AGG | + | chr3.1:77756426-77756445 | MS.gene06324:CDS | 35.0% |
| !! | TCTTTCCATTTTTCTGAAGG+AGG | - | chr3.1:77756019-77756038 | None:intergenic | 35.0% |
| AAGAATCAGCATCCTGACAA+GGG | - | chr3.1:77755416-77755435 | None:intergenic | 40.0% | |
| ACCTCAATAAGCTGACCATA+AGG | - | chr3.1:77754894-77754913 | None:intergenic | 40.0% | |
| AGCATGACAGTAAGGATAGA+TGG | + | chr3.1:77754964-77754983 | MS.gene06324:CDS | 40.0% | |
| CAATACTCCATAATTCCGTC+AGG | - | chr3.1:77755300-77755319 | None:intergenic | 40.0% | |
| CGTAAATACATCGGTGATAC+TGG | + | chr3.1:77755195-77755214 | MS.gene06324:CDS | 40.0% | |
| CTGACGGAATTATGGAGTAT+TGG | + | chr3.1:77755298-77755317 | MS.gene06324:CDS | 40.0% | |
| CTTGCAAGGAACTTATGAAG+TGG | + | chr3.1:77755713-77755732 | MS.gene06324:CDS | 40.0% | |
| TCAGCTTATTGAGGTGAAAG+AGG | + | chr3.1:77754899-77754918 | MS.gene06324:CDS | 40.0% | |
| TCTTCATTGAGTGGCTGAAT+TGG | - | chr3.1:77756163-77756182 | None:intergenic | 40.0% | |
| TCTTCCTTCCTAGTAACAGA+AGG | - | chr3.1:77754723-77754742 | None:intergenic | 40.0% | |
| TGAAGTGGAGCAACATCTTA+TGG | + | chr3.1:77755937-77755956 | MS.gene06324:CDS | 40.0% | |
| TTAGTACAGGTCGGGTTATT+GGG | - | chr3.1:77755164-77755183 | None:intergenic | 40.0% | |
| TTCTGTTACTAGGAAGGAAG+AGG | + | chr3.1:77754722-77754741 | MS.gene06324:CDS | 40.0% | |
| TTTCTTGAAGATCCCTACTC+AGG | + | chr3.1:77756133-77756152 | MS.gene06324:CDS | 40.0% | |
| TTTGGATAGCAGAGATATGC+AGG | + | chr3.1:77755554-77755573 | MS.gene06324:intron | 40.0% | |
| ! | CGCTTCCTTTTCTTACTATC+TGG | - | chr3.1:77754801-77754820 | None:intergenic | 40.0% |
| ! | GAGAAAGAAGCATGACAGTA+AGG | + | chr3.1:77754956-77754975 | MS.gene06324:CDS | 40.0% |
| ! | TTCTGAAGGAGGACTAAAAG+TGG | - | chr3.1:77756008-77756027 | None:intergenic | 40.0% |
| !! | CGGAATTATGGAGTATTGGT+TGG | + | chr3.1:77755302-77755321 | MS.gene06324:CDS | 40.0% |
| !! | TATGGAGTATTGGTTGGAGA+GGG | + | chr3.1:77755308-77755327 | MS.gene06324:CDS | 40.0% |
| !! | TTATGGAGTATTGGTTGGAG+AGG | + | chr3.1:77755307-77755326 | MS.gene06324:CDS | 40.0% |
| AGAATCAGCATCCTGACAAG+GGG | - | chr3.1:77755415-77755434 | None:intergenic | 45.0% | |
| AGATGTGCGTGCATGTTTGA+GGG | - | chr3.1:77756237-77756256 | None:intergenic | 45.0% | |
| AGCTGATCTTAGTACAGGTC+GGG | - | chr3.1:77755172-77755191 | None:intergenic | 45.0% | |
| AGTATGGTGAGTTCGCGATA+TGG | + | chr3.1:77755909-77755928 | MS.gene06324:CDS | 45.0% | |
| CAACCGCCTAACTGAAATCA+TGG | + | chr3.1:77755750-77755769 | MS.gene06324:CDS | 45.0% | |
| CACTAACCCAGACAATACTC+AGG | + | chr3.1:77756051-77756070 | MS.gene06324:CDS | 45.0% | |
| CAGCTGATCTTAGTACAGGT+CGG | - | chr3.1:77755173-77755192 | None:intergenic | 45.0% | |
| CATCGTCAACAGGCATTCAT+TGG | + | chr3.1:77754678-77754697 | MS.gene06324:CDS | 45.0% | |
| CCAGACAATACTCAGGATGA+CGG | + | chr3.1:77756058-77756077 | MS.gene06324:CDS | 45.0% | |
| CGCGATATGGAAAACTGAAG+TGG | + | chr3.1:77755922-77755941 | MS.gene06324:CDS | 45.0% | |
| CTAAAAGTGGTGCACTCTCT+TGG | - | chr3.1:77755995-77756014 | None:intergenic | 45.0% | |
| CTTAGTACAGGTCGGGTTAT+TGG | - | chr3.1:77755165-77755184 | None:intergenic | 45.0% | |
| GAAGAATCAGCATCCTGACA+AGG | - | chr3.1:77755417-77755436 | None:intergenic | 45.0% | |
| GAAGCACATTGACCGTAAAG+TGG | + | chr3.1:77755236-77755255 | MS.gene06324:CDS | 45.0% | |
| GAAGCTTAGAGAGGTGAAAG+AGG | + | chr3.1:77754866-77754885 | MS.gene06324:CDS | 45.0% | |
| GATACCACCATCCACTGTTA+GGG | + | chr3.1:77755380-77755399 | MS.gene06324:CDS | 45.0% | |
| GCCTTATGGTCAGCTTATTG+AGG | + | chr3.1:77754890-77754909 | MS.gene06324:CDS | 45.0% | |
| GGTCAATGTGCTTCAGTAAG+TGG | - | chr3.1:77755230-77755249 | None:intergenic | 45.0% | |
| GGTTGATCCTCTTGCATTGT+GGG | - | chr3.1:77756355-77756374 | None:intergenic | 45.0% | |
| GTCAACAGGCATTCATTGGT+TGG | + | chr3.1:77754682-77754701 | MS.gene06324:CDS | 45.0% | |
| GTCTTGTGAGAAGCTTAGAG+AGG | + | chr3.1:77754857-77754876 | MS.gene06324:CDS | 45.0% | |
| GTTCAACCCTGACGGAATTA+TGG | + | chr3.1:77755290-77755309 | MS.gene06324:CDS | 45.0% | |
| TACTAGGAAGGAAGAGGACT+CGG | + | chr3.1:77754728-77754747 | MS.gene06324:CDS | 45.0% | |
| TCAATGGCAGAAGACTTGCA+AGG | + | chr3.1:77755699-77755718 | MS.gene06324:intron | 45.0% | |
| TCACCTCTCTAAGCTGACTA+AGG | - | chr3.1:77754830-77754849 | None:intergenic | 45.0% | |
| TCAGCTGCCCGTAAATACAT+CGG | + | chr3.1:77755186-77755205 | MS.gene06324:CDS | 45.0% | |
| TGAATTGGCATGCCTGAGTA+GGG | - | chr3.1:77756148-77756167 | None:intergenic | 45.0% | |
| TGGAGGTGGAAAAACCAAGA+AGG | + | chr3.1:77756260-77756279 | MS.gene06324:intron | 45.0% | |
| ! | AGGTGAAAGAGGAGTATGCT+GGG | + | chr3.1:77754910-77754929 | MS.gene06324:CDS | 45.0% |
| ! | AGGTTGATCCTCTTGCATTG+TGG | - | chr3.1:77756356-77756375 | None:intergenic | 45.0% |
| ! | AGTGGATGGTGGTATCCAAT+AGG | - | chr3.1:77755376-77755395 | None:intergenic | 45.0% |
| ! | CGTCATCCTGAGTATTGTCT+GGG | - | chr3.1:77756060-77756079 | None:intergenic | 45.0% |
| ! | GAAGAATCTGGGGTGACATT+AGG | - | chr3.1:77756376-77756395 | None:intergenic | 45.0% |
| ! | GTGGATGGTGGTATCCAATA+GGG | - | chr3.1:77755375-77755394 | None:intergenic | 45.0% |
| ! | TGGATGGTGGTATCCAATAG+GGG | - | chr3.1:77755374-77755393 | None:intergenic | 45.0% |
| !! | ACGGATTGGCAACTTGGATA+GGG | + | chr3.1:77756077-77756096 | MS.gene06324:CDS | 45.0% |
| !! | CAATACTCAGGATGACGGAT+TGG | + | chr3.1:77756063-77756082 | MS.gene06324:CDS | 45.0% |
| !! | TCTTGGTTTTTCCACCTCCA+AGG | - | chr3.1:77756260-77756279 | None:intergenic | 45.0% |
| !!! | AATATCAAAATAATATTTTA+TGG | + | chr3.1:77755501-77755520 | MS.gene06324:intron | 5.0% |
| AAAGATGGAGCAGCAGCTGT+TGG | + | chr3.1:77756570-77756589 | MS.gene06324:CDS | 50.0% | |
| AACATGCACGCACATCTCCT+TGG | + | chr3.1:77756240-77756259 | MS.gene06324:intron | 50.0% | |
| AGGATAGATGGTCAAGCGAG+AGG | + | chr3.1:77754976-77754995 | MS.gene06324:CDS | 50.0% | |
| AGTCGGCTGAACAAAGCATG+TGG | + | chr3.1:77755103-77755122 | MS.gene06324:CDS | 50.0% | |
| ATTGACCGTAAAGTGGCACC+TGG | + | chr3.1:77755243-77755262 | MS.gene06324:CDS | 50.0% | |
| CAGCCTTAGTCAGCTTAGAG+AGG | + | chr3.1:77754824-77754843 | MS.gene06324:CDS | 50.0% | |
| CGAAGATGGTTCAACCCTGA+CGG | + | chr3.1:77755282-77755301 | MS.gene06324:CDS | 50.0% | |
| CGTCAGGGTTGAACCATCTT+CGG | - | chr3.1:77755284-77755303 | None:intergenic | 50.0% | |
| CTCTAAGCTGACTAAGGCTG+AGG | - | chr3.1:77754824-77754843 | None:intergenic | 50.0% | |
| CTGAATTGGCATGCCTGAGT+AGG | - | chr3.1:77756149-77756168 | None:intergenic | 50.0% | |
| GAGATGTGCGTGCATGTTTG+AGG | - | chr3.1:77756238-77756257 | None:intergenic | 50.0% | |
| GAGGTGAAAGAGGAGCCTTA+TGG | + | chr3.1:77754876-77754895 | MS.gene06324:CDS | 50.0% | |
| GCTGATACCCACAATGCAAG+AGG | + | chr3.1:77756345-77756364 | MS.gene06324:CDS | 50.0% | |
| GGATACCACCATCCACTGTT+AGG | + | chr3.1:77755379-77755398 | MS.gene06324:CDS | 50.0% | |
| GTCGGCTGAACAAAGCATGT+GGG | + | chr3.1:77755104-77755123 | MS.gene06324:CDS | 50.0% | |
| TGCGTGCATGTTTGAGGGTT+TGG | - | chr3.1:77756232-77756251 | None:intergenic | 50.0% | |
| ! | CCGTCATCCTGAGTATTGTC+TGG | - | chr3.1:77756061-77756080 | None:intergenic | 50.0% |
| ! | GAGGTGAAAGAGGAGTATGC+TGG | + | chr3.1:77754909-77754928 | MS.gene06324:CDS | 50.0% |
| !! | AGGATGACGGATTGGCAACT+TGG | + | chr3.1:77756071-77756090 | MS.gene06324:CDS | 50.0% |
| !! | GACGGATTGGCAACTTGGAT+AGG | + | chr3.1:77756076-77756095 | MS.gene06324:CDS | 50.0% |
| ACCGTAAAGTGGCACCTGGA+GGG | + | chr3.1:77755247-77755266 | MS.gene06324:CDS | 55.0% | |
| ATGCACGCACATCTCCTTGG+AGG | + | chr3.1:77756243-77756262 | MS.gene06324:intron | 55.0% | |
| ATGGCCCTAACAGTGGATGG+TGG | - | chr3.1:77755387-77755406 | None:intergenic | 55.0% | |
| CGGGCAGCTGATCTTAGTAC+AGG | - | chr3.1:77755177-77755196 | None:intergenic | 55.0% | |
| GGCTGAACAAAGCATGTGGG+AGG | + | chr3.1:77755107-77755126 | MS.gene06324:CDS | 55.0% | |
| TTGGTTGGAGAGGGCTGACT+TGG | + | chr3.1:77755317-77755336 | MS.gene06324:CDS | 55.0% | |
| ! | GGACTGATCGGTTCCGAAGA+TGG | + | chr3.1:77755268-77755287 | MS.gene06324:CDS | 55.0% |
| ! | GTGGGGTGTTCATCGTCAAC+AGG | + | chr3.1:77754668-77754687 | MS.gene06324:CDS | 55.0% |
| !! | AAGCATGTGGGAGGTGCTGA+AGG | + | chr3.1:77755116-77755135 | MS.gene06324:CDS | 55.0% |
| !! | CTGGGGTTGATGACCCCTAT+TGG | + | chr3.1:77755358-77755377 | MS.gene06324:CDS | 55.0% |
| !! | TCCCTCCAGGTGCCACTTTA+CGG | - | chr3.1:77755251-77755270 | None:intergenic | 55.0% |
| CACGCACATCTCCTTGGAGG+TGG | + | chr3.1:77756246-77756265 | MS.gene06324:intron | 60.0% | |
| CAGCATCCTGACAAGGGGCA+CGG | - | chr3.1:77755410-77755429 | None:intergenic | 60.0% | |
| CGGATGGCCCTAACAGTGGA+TGG | - | chr3.1:77755390-77755409 | None:intergenic | 60.0% | |
| GACCGTAAAGTGGCACCTGG+AGG | + | chr3.1:77755246-77755265 | MS.gene06324:CDS | 60.0% | |
| GCAGGAGCTCATTGCCCAGA+AGG | + | chr3.1:77755572-77755591 | MS.gene06324:CDS | 60.0% | |
| TGGCACCTGGAGGGACTGAT+CGG | + | chr3.1:77755256-77755275 | MS.gene06324:CDS | 60.0% | |
| ! | ATCCTGACAAGGGGCACGGA+TGG | - | chr3.1:77755406-77755425 | None:intergenic | 60.0% |
| ! | TGACTTGGATGACGTCCGCG+AGG | + | chr3.1:77755332-77755351 | MS.gene06324:CDS | 60.0% |
| !! | TGGGAGGTGCTGAAGGCAGA+GGG | + | chr3.1:77755123-77755142 | MS.gene06324:CDS | 60.0% |
| ATGACGTCCGCGAGGAGGCT+GGG | + | chr3.1:77755340-77755359 | MS.gene06324:CDS | 65.0% | |
| CATCAACCCCAGCCTCCTCG+CGG | - | chr3.1:77755350-77755369 | None:intergenic | 65.0% | |
| CGGAACCGATCAGTCCCTCC+AGG | - | chr3.1:77755264-77755283 | None:intergenic | 65.0% | |
| CTTGGATGACGTCCGCGAGG+AGG | + | chr3.1:77755335-77755354 | MS.gene06324:CDS | 65.0% | |
| GGCACGGATGGCCCTAACAG+TGG | - | chr3.1:77755394-77755413 | None:intergenic | 65.0% | |
| !! | GGAGGTGCTGAAGGCAGAGG+GGG | + | chr3.1:77755125-77755144 | MS.gene06324:CDS | 65.0% |
| !! | GGGAGGTGCTGAAGGCAGAG+GGG | + | chr3.1:77755124-77755143 | MS.gene06324:CDS | 65.0% |
| !! | GTGGGAGGTGCTGAAGGCAG+AGG | + | chr3.1:77755122-77755141 | MS.gene06324:CDS | 65.0% |
| GATGACGTCCGCGAGGAGGC+TGG | + | chr3.1:77755339-77755358 | MS.gene06324:CDS | 70.0% | |
| GGCCATCCGTGCCCCTTGTC+AGG | + | chr3.1:77755401-77755420 | MS.gene06324:CDS | 70.0% | |
| TGACGTCCGCGAGGAGGCTG+GGG | + | chr3.1:77755341-77755360 | MS.gene06324:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 77754660 | 77756633 | 77754660 | ID=MS.gene06324 |
| chr3.1 | mRNA | 77754660 | 77756633 | 77754660 | ID=MS.gene06324.t1;Parent=MS.gene06324 |
| chr3.1 | exon | 77754660 | 77754997 | 77754660 | ID=MS.gene06324.t1.exon1;Parent=MS.gene06324.t1 |
| chr3.1 | CDS | 77754660 | 77754997 | 77754660 | ID=cds.MS.gene06324.t1;Parent=MS.gene06324.t1 |
| chr3.1 | exon | 77755098 | 77755481 | 77755098 | ID=MS.gene06324.t1.exon2;Parent=MS.gene06324.t1 |
| chr3.1 | CDS | 77755098 | 77755481 | 77755098 | ID=cds.MS.gene06324.t1;Parent=MS.gene06324.t1 |
| chr3.1 | exon | 77755566 | 77755623 | 77755566 | ID=MS.gene06324.t1.exon3;Parent=MS.gene06324.t1 |
| chr3.1 | CDS | 77755566 | 77755623 | 77755566 | ID=cds.MS.gene06324.t1;Parent=MS.gene06324.t1 |
| chr3.1 | exon | 77755709 | 77755792 | 77755709 | ID=MS.gene06324.t1.exon4;Parent=MS.gene06324.t1 |
| chr3.1 | CDS | 77755709 | 77755792 | 77755709 | ID=cds.MS.gene06324.t1;Parent=MS.gene06324.t1 |
| chr3.1 | exon | 77755905 | 77756200 | 77755905 | ID=MS.gene06324.t1.exon5;Parent=MS.gene06324.t1 |
| chr3.1 | CDS | 77755905 | 77756200 | 77755905 | ID=cds.MS.gene06324.t1;Parent=MS.gene06324.t1 |
| chr3.1 | exon | 77756333 | 77756447 | 77756333 | ID=MS.gene06324.t1.exon6;Parent=MS.gene06324.t1 |
| chr3.1 | CDS | 77756333 | 77756447 | 77756333 | ID=cds.MS.gene06324.t1;Parent=MS.gene06324.t1 |
| chr3.1 | exon | 77756538 | 77756633 | 77756538 | ID=MS.gene06324.t1.exon7;Parent=MS.gene06324.t1 |
| chr3.1 | CDS | 77756538 | 77756633 | 77756538 | ID=cds.MS.gene06324.t1;Parent=MS.gene06324.t1 |
| Gene Sequence |
| Protein sequence |
