Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065793.t1 | XP_024637973.1 | 96.2 | 365 | 14 | 0 | 32 | 396 | 173 | 537 | 2.40E-171 | 612.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065793.t1 | A0A396IBW1 | 96.2 | 365 | 14 | 0 | 32 | 396 | 173 | 537 | 1.7e-171 | 612.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene065793 | 0.801079 | 1.07E-48 | -1.69E-46 |
MS.gene049207 | MS.gene065793 | 0.808041 | 3.76E-50 | -1.69E-46 |
MS.gene049254 | MS.gene065793 | 0.801474 | 8.85E-49 | -1.69E-46 |
MS.gene049404 | MS.gene065793 | 0.812284 | 4.58E-51 | -1.69E-46 |
MS.gene049666 | MS.gene065793 | 0.813175 | 2.92E-51 | -1.69E-46 |
MS.gene049821 | MS.gene065793 | 0.833588 | 4.89E-56 | -1.69E-46 |
MS.gene049824 | MS.gene065793 | 0.850796 | 1.35E-60 | -1.69E-46 |
MS.gene049825 | MS.gene065793 | 0.835212 | 1.91E-56 | -1.69E-46 |
MS.gene049873 | MS.gene065793 | 0.851877 | 6.66E-61 | -1.69E-46 |
MS.gene050559 | MS.gene065793 | 0.813838 | 2.09E-51 | -1.69E-46 |
MS.gene050561 | MS.gene065793 | 0.800585 | 1.35E-48 | -1.69E-46 |
MS.gene050689 | MS.gene065793 | 0.813851 | 2.08E-51 | -1.69E-46 |
MS.gene051198 | MS.gene065793 | 0.806741 | 7.10E-50 | -1.69E-46 |
MS.gene051279 | MS.gene065793 | 0.800203 | 1.61E-48 | -1.69E-46 |
MS.gene051363 | MS.gene065793 | 0.841839 | 3.73E-58 | -1.69E-46 |
MS.gene051365 | MS.gene065793 | 0.81499 | 1.16E-51 | -1.69E-46 |
MS.gene051744 | MS.gene065793 | 0.810668 | 1.03E-50 | -1.69E-46 |
MS.gene051957 | MS.gene065793 | 0.802471 | 5.52E-49 | -1.69E-46 |
MS.gene051975 | MS.gene065793 | 0.80425 | 2.36E-49 | -1.69E-46 |
MS.gene052208 | MS.gene065793 | 0.809443 | 1.89E-50 | -1.69E-46 |
MS.gene052519 | MS.gene065793 | 0.81951 | 1.12E-52 | -1.69E-46 |
MS.gene052582 | MS.gene065793 | 0.819566 | 1.09E-52 | -1.69E-46 |
MS.gene052584 | MS.gene065793 | 0.840996 | 6.21E-58 | -1.69E-46 |
MS.gene052773 | MS.gene065793 | 0.803152 | 4.00E-49 | -1.69E-46 |
MS.gene053079 | MS.gene065793 | 0.801659 | 8.11E-49 | -1.69E-46 |
MS.gene053080 | MS.gene065793 | 0.865486 | 5.70E-65 | -1.69E-46 |
MS.gene05308 | MS.gene065793 | 0.809658 | 1.70E-50 | -1.69E-46 |
MS.gene053122 | MS.gene065793 | 0.82159 | 3.72E-53 | -1.69E-46 |
MS.gene053195 | MS.gene065793 | 0.80627 | 8.93E-50 | -1.69E-46 |
MS.gene053226 | MS.gene065793 | 0.864612 | 1.07E-64 | -1.69E-46 |
MS.gene053542 | MS.gene065793 | 0.800488 | 1.41E-48 | -1.69E-46 |
MS.gene053599 | MS.gene065793 | 0.816466 | 5.45E-52 | -1.69E-46 |
MS.gene05364 | MS.gene065793 | 0.849414 | 3.28E-60 | -1.69E-46 |
MS.gene053931 | MS.gene065793 | 0.81128 | 7.58E-51 | -1.69E-46 |
MS.gene053995 | MS.gene065793 | 0.829331 | 5.46E-55 | -1.69E-46 |
MS.gene054651 | MS.gene065793 | 0.857907 | 1.19E-62 | -1.69E-46 |
MS.gene05517 | MS.gene065793 | 0.802127 | 6.50E-49 | -1.69E-46 |
MS.gene055222 | MS.gene065793 | 0.80009 | 1.70E-48 | -1.69E-46 |
MS.gene05548 | MS.gene065793 | 0.809558 | 1.78E-50 | -1.69E-46 |
MS.gene055555 | MS.gene065793 | 0.804209 | 2.41E-49 | -1.69E-46 |
MS.gene055586 | MS.gene065793 | 0.810282 | 1.25E-50 | -1.69E-46 |
MS.gene055694 | MS.gene065793 | 0.826427 | 2.73E-54 | -1.69E-46 |
MS.gene055778 | MS.gene065793 | 0.817003 | 4.13E-52 | -1.69E-46 |
MS.gene055808 | MS.gene065793 | 0.836745 | 7.82E-57 | -1.69E-46 |
MS.gene055841 | MS.gene065793 | 0.82959 | 4.73E-55 | -1.69E-46 |
MS.gene056050 | MS.gene065793 | 0.801385 | 9.23E-49 | -1.69E-46 |
MS.gene056091 | MS.gene065793 | 0.802301 | 5.99E-49 | -1.69E-46 |
MS.gene056215 | MS.gene065793 | 0.819452 | 1.15E-52 | -1.69E-46 |
MS.gene056366 | MS.gene065793 | 0.803155 | 3.99E-49 | -1.69E-46 |
MS.gene056776 | MS.gene065793 | 0.809307 | 2.02E-50 | -1.69E-46 |
MS.gene05686 | MS.gene065793 | 0.831516 | 1.60E-55 | -1.69E-46 |
MS.gene05689 | MS.gene065793 | 0.809678 | 1.68E-50 | -1.69E-46 |
MS.gene057027 | MS.gene065793 | 0.815856 | 7.46E-52 | -1.69E-46 |
MS.gene057060 | MS.gene065793 | 0.820635 | 6.18E-53 | -1.69E-46 |
MS.gene057102 | MS.gene065793 | 0.800012 | 1.76E-48 | -1.69E-46 |
MS.gene057208 | MS.gene065793 | 0.826481 | 2.65E-54 | -1.69E-46 |
MS.gene057555 | MS.gene065793 | 0.801839 | 7.45E-49 | -1.69E-46 |
MS.gene057693 | MS.gene065793 | 0.810299 | 1.24E-50 | -1.69E-46 |
MS.gene057705 | MS.gene065793 | 0.829457 | 5.09E-55 | -1.69E-46 |
MS.gene058008 | MS.gene065793 | 0.819262 | 1.27E-52 | -1.69E-46 |
MS.gene058009 | MS.gene065793 | 0.828111 | 1.08E-54 | -1.69E-46 |
MS.gene058037 | MS.gene065793 | 0.820611 | 6.26E-53 | -1.69E-46 |
MS.gene058126 | MS.gene065793 | 0.819733 | 9.95E-53 | -1.69E-46 |
MS.gene058625 | MS.gene065793 | 0.829097 | 6.23E-55 | -1.69E-46 |
MS.gene058781 | MS.gene065793 | 0.82454 | 7.64E-54 | -1.69E-46 |
MS.gene058783 | MS.gene065793 | 0.841482 | 4.63E-58 | -1.69E-46 |
MS.gene058979 | MS.gene065793 | 0.832446 | 9.41E-56 | -1.69E-46 |
MS.gene059317 | MS.gene065793 | 0.807768 | 4.30E-50 | -1.69E-46 |
MS.gene05953 | MS.gene065793 | 0.802628 | 5.13E-49 | -1.69E-46 |
MS.gene05954 | MS.gene065793 | 0.841103 | 5.82E-58 | -1.69E-46 |
MS.gene059625 | MS.gene065793 | 0.813902 | 2.02E-51 | -1.69E-46 |
MS.gene05978 | MS.gene065793 | 0.845632 | 3.60E-59 | -1.69E-46 |
MS.gene059842 | MS.gene065793 | 0.80428 | 2.33E-49 | -1.69E-46 |
MS.gene059935 | MS.gene065793 | 0.835196 | 1.93E-56 | -1.69E-46 |
MS.gene060365 | MS.gene065793 | 0.834543 | 2.82E-56 | -1.69E-46 |
MS.gene060429 | MS.gene065793 | 0.842095 | 3.19E-58 | -1.69E-46 |
MS.gene060521 | MS.gene065793 | 0.806728 | 7.14E-50 | -1.69E-46 |
MS.gene060587 | MS.gene065793 | 0.813749 | 2.19E-51 | -1.69E-46 |
MS.gene060935 | MS.gene065793 | 0.840898 | 6.59E-58 | -1.69E-46 |
MS.gene060937 | MS.gene065793 | 0.820584 | 6.35E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065793.t1 | MTR_2g436140 | 45.161 | 93 | 49 | 1 | 35 | 127 | 47 | 137 | 3.83e-18 | 87.0 |
MS.gene065793.t1 | MTR_7g060170 | 50.000 | 82 | 39 | 1 | 214 | 295 | 6 | 85 | 3.85e-18 | 80.1 |
MS.gene065793.t1 | MTR_7g074083 | 49.275 | 69 | 35 | 0 | 205 | 273 | 24 | 92 | 1.74e-16 | 76.3 |
MS.gene065793.t1 | MTR_5g086820 | 55.556 | 54 | 24 | 0 | 220 | 273 | 39 | 92 | 1.04e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 184 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATCTCCTGCATCCCGTTC+TGG | 0.201986 | 4.4:-32832618 | None:intergenic |
CAAAGAATCATCAAGCTAAA+AGG | 0.225169 | 4.4:+32833556 | MS.gene065793:CDS |
CAAAGAATCATCAAGCTAAA+AGG | 0.225169 | 4.4:+32833847 | MS.gene065793:CDS |
CAAAGCAACATCATGCTAAA+AGG | 0.228413 | 4.4:+32833412 | MS.gene065793:CDS |
CTTTCAGCTTGATGATTCTT+TGG | 0.237633 | 4.4:-32833699 | None:intergenic |
CAAAGCAGCGTCAAGCTAAA+AGG | 0.248224 | 4.4:+32833343 | MS.gene065793:CDS |
GACGAAGACAATTTGTTAGA+TGG | 0.302419 | 4.4:+32833597 | MS.gene065793:CDS |
TTGACTAGAGATCTTTATAA+AGG | 0.315435 | 4.4:-32832182 | None:intergenic |
CGCCATCCAGTCACACTTCC+AGG | 0.326768 | 4.4:+32831851 | MS.gene065793:CDS |
GAATATTGGTGGAAGTTGTT+TGG | 0.327898 | 4.4:+32831915 | MS.gene065793:CDS |
TGAGTTTGTTAGTGGAGTTC+AGG | 0.329607 | 4.4:+32831214 | MS.gene065793:CDS |
CTTTCAGCTTGATGATGCTT+TGG | 0.336556 | 4.4:-32833273 | None:intergenic |
GTGCTGCGGCAGCCTCTTTA+CGG | 0.338605 | 4.4:-32832825 | None:intergenic |
AATATTGGTGGAAGTTGTTT+GGG | 0.347492 | 4.4:+32831916 | MS.gene065793:CDS |
AAAGAATCATCAAGCTAAAA+GGG | 0.374571 | 4.4:+32833557 | MS.gene065793:CDS |
AAAGAATCATCAAGCTAAAA+GGG | 0.374571 | 4.4:+32833848 | MS.gene065793:CDS |
GAAACAACATTATCAGCATT+TGG | 0.377989 | 4.4:+32832909 | MS.gene065793:CDS |
CAATATTCCCTTACATCCTC+TGG | 0.378318 | 4.4:-32831900 | None:intergenic |
TATCTCCTGCATCCCGTTCT+GGG | 0.384815 | 4.4:-32832617 | None:intergenic |
AAGGAGGTACAAACACAAAA+TGG | 0.387875 | 4.4:+32832586 | MS.gene065793:CDS |
GAAAGAAACATCTAGCTCTA+AGG | 0.395879 | 4.4:+32833127 | MS.gene065793:CDS |
AACGGGATGCAGGAGATAGA+TGG | 0.396181 | 4.4:+32832622 | MS.gene065793:CDS |
GGAGGCTGCTGCAGCACGTC+AGG | 0.396719 | 4.4:+32832852 | MS.gene065793:CDS |
CAGAGGATGTAAGGGAATAT+TGG | 0.403849 | 4.4:+32831901 | MS.gene065793:CDS |
TGATCACACCCACCACTATA+AGG | 0.408691 | 4.4:-32832772 | None:intergenic |
AAGAGTCGAGGTCGGTGTTA+TGG | 0.410049 | 4.4:+32832685 | MS.gene065793:CDS |
GTGAGACCCCAGAGGATGTA+AGG | 0.413212 | 4.4:+32831892 | MS.gene065793:CDS |
AGAGGCTGCCGCAGCACATC+AGG | 0.413600 | 4.4:+32832831 | MS.gene065793:CDS |
TCCAGGGTCCTTTCTATCGC+TGG | 0.416171 | 4.4:+32831868 | MS.gene065793:CDS |
GTTTCGACTCAGCTGCCTCC+TGG | 0.416729 | 4.4:-32832891 | None:intergenic |
ATAAAAGGAAGTCTGGCAAT+TGG | 0.418430 | 4.4:+32832428 | MS.gene065793:CDS |
TGCTTTGGTAAGACCCCGTC+TGG | 0.419898 | 4.4:-32833468 | None:intergenic |
TTAATGCAGGCTCAAGAACT+TGG | 0.423789 | 4.4:+32832367 | MS.gene065793:intron |
GGAGGCAGCCACAGCACGCC+AGG | 0.425194 | 4.4:+32832873 | MS.gene065793:CDS |
TGCTTTGGTAAAACCCCATC+TGG | 0.426446 | 4.4:-32833759 | None:intergenic |
CGCAGGGGACGCCAATCAGC+AGG | 0.428309 | 4.4:+32833015 | MS.gene065793:CDS |
ATGGTAAGGCCTCCCAGAAC+GGG | 0.431393 | 4.4:+32832605 | MS.gene065793:CDS |
CTCTTTACGGACTGCATCAA+TGG | 0.432826 | 4.4:-32832812 | None:intergenic |
GCTTGGGATCCTCGTGATCA+TGG | 0.433534 | 4.4:+32832019 | MS.gene065793:CDS |
TTGAACTATGAGTTTGTTAG+TGG | 0.434300 | 4.4:+32831206 | None:intergenic |
AAAGAATCATCAAGCTGAAA+GGG | 0.439093 | 4.4:+32833701 | MS.gene065793:CDS |
AAAGCAACATCATGCTAAAA+GGG | 0.442573 | 4.4:+32833413 | MS.gene065793:CDS |
AAAGCAGCGTCAAGCTAAAA+GGG | 0.443246 | 4.4:+32833344 | MS.gene065793:CDS |
GCCACCCATAAAAGGAAGTC+TGG | 0.448504 | 4.4:+32832421 | MS.gene065793:CDS |
TAAAAGGAAGTCTGGCAATT+GGG | 0.451077 | 4.4:+32832429 | MS.gene065793:CDS |
GCTCTAGAGCGCCAATCAGC+AGG | 0.461373 | 4.4:+32832967 | MS.gene065793:CDS |
CAGACTTTGCTTTAAACCTC+CGG | 0.461416 | 4.4:+32832713 | MS.gene065793:CDS |
CTCTCAAAAGTGAGGAAGAA+GGG | 0.464033 | 4.4:+32832094 | MS.gene065793:CDS |
ACGGTAATGACGACGGCGAC+GGG | 0.464069 | 4.4:-32833919 | None:intergenic |
GCAGCAGCAGGCGCCGCGCT+AGG | 0.466466 | 4.4:-32831819 | None:intergenic |
GAAGGGTCTTAATGCCCATT+GGG | 0.467273 | 4.4:+32832150 | MS.gene065793:CDS |
TTCGCTGACTCAGGAGTCTC+GGG | 0.469281 | 4.4:+32832747 | MS.gene065793:CDS |
ACGAAGACAATTTGTTAGAT+GGG | 0.469400 | 4.4:+32833598 | MS.gene065793:CDS |
CATCCTCACTATGATAATGA+TGG | 0.471233 | 4.4:+32833654 | MS.gene065793:CDS |
AAAGCATCATCAAGCTGAAA+GGG | 0.476885 | 4.4:+32833275 | MS.gene065793:CDS |
GCGTGTTTAATCGCAGCAGC+AGG | 0.479484 | 4.4:-32831831 | None:intergenic |
GTCTCACTCCAGCGATAGAA+AGG | 0.483175 | 4.4:-32831876 | None:intergenic |
GGCTGCTGCAGCACGTCAGG+AGG | 0.484517 | 4.4:+32832855 | MS.gene065793:CDS |
AGTTCAGGAGTTTATTAAGA+AGG | 0.488470 | 4.4:+32831229 | MS.gene065793:CDS |
CTATGATGATGAGGATTCGC+TGG | 0.489767 | 4.4:+32833239 | MS.gene065793:CDS |
CTTCGCTGACTCAGGAGTCT+CGG | 0.490441 | 4.4:+32832746 | MS.gene065793:CDS |
TAATGACGACGGCGACGGGC+TGG | 0.491841 | 4.4:-32833915 | None:intergenic |
GGCCTCCCAGAACGGGATGC+AGG | 0.492623 | 4.4:+32832612 | MS.gene065793:CDS |
AGAAGGGGACGAGACCTCAT+TGG | 0.497085 | 4.4:+32832110 | MS.gene065793:CDS |
GAGCCTTGCGGCCTGTGGTG+TGG | 0.498769 | 4.4:-32832243 | None:intergenic |
ATTGGATATGTGAAGAGGCT+TGG | 0.499061 | 4.4:+32832128 | MS.gene065793:CDS |
GGAAGGGTCTTAATGCCCAT+TGG | 0.502764 | 4.4:+32832149 | MS.gene065793:CDS |
AAGGACCCTGGAAGTGTGAC+TGG | 0.505631 | 4.4:-32831857 | None:intergenic |
CAAGTGTGAGTCAAGCTCGC+AGG | 0.505729 | 4.4:+32832998 | MS.gene065793:CDS |
CAAGTGCGAGTCAAGCTCGC+AGG | 0.505729 | 4.4:+32833046 | MS.gene065793:CDS |
GCCTTTACACGAATTACGAT+TGG | 0.507806 | 4.4:-32832212 | None:intergenic |
AGCTGCCTCCTGGCGTGCTG+TGG | 0.510431 | 4.4:-32832881 | None:intergenic |
GATATGTGAAGAGGCTTGGA+AGG | 0.511244 | 4.4:+32832132 | MS.gene065793:CDS |
ATCCTCACTATGATAATGAT+GGG | 0.512412 | 4.4:+32833655 | MS.gene065793:CDS |
CAAAGAATCATCAAGCTGAA+AGG | 0.512957 | 4.4:+32833700 | MS.gene065793:CDS |
AATATTCCCTTACATCCTCT+GGG | 0.513122 | 4.4:-32831899 | None:intergenic |
CTAGATGTTTCTTTCTTCGA+CGG | 0.513717 | 4.4:-32833119 | None:intergenic |
TTGTGAAAGCACCTGCTGAT+TGG | 0.515650 | 4.4:-32833026 | None:intergenic |
CTAAGAACTCGTCTAGTGAA+TGG | 0.521135 | 4.4:-32833092 | None:intergenic |
ACCAATCGTAATTCGTGTAA+AGG | 0.522365 | 4.4:+32832211 | MS.gene065793:CDS |
AAAGGCTTCACCCTCCCAAT+GGG | 0.525570 | 4.4:-32832164 | None:intergenic |
TGGTGTAACTTCGCTGACTC+AGG | 0.525580 | 4.4:+32832738 | MS.gene065793:CDS |
ACGGGATGCAGGAGATAGAT+GGG | 0.528666 | 4.4:+32832623 | MS.gene065793:CDS |
AAGTGTGAGTCAAGCTCGCA+GGG | 0.528888 | 4.4:+32832999 | MS.gene065793:CDS |
ATGATGACGATTTGCCAGAC+GGG | 0.529560 | 4.4:+32833454 | MS.gene065793:CDS |
CAAAGCATCATCAAGCTGAA+AGG | 0.530065 | 4.4:+32833274 | MS.gene065793:CDS |
GCGAATCCTCGTCATTATCA+TGG | 0.530875 | 4.4:-32833518 | None:intergenic |
TAAGACCTCGTCTAGTGAAT+CGG | 0.531398 | 4.4:-32833892 | None:intergenic |
ACGATGACGATTTGCCAGAT+GGG | 0.532630 | 4.4:+32833745 | MS.gene065793:CDS |
TTGTGAAAGCACCTGCTGAT+TGG | 0.534635 | 4.4:-32832978 | None:intergenic |
AAGTGCGAGTCAAGCTCGCA+GGG | 0.535151 | 4.4:+32833047 | MS.gene065793:CDS |
CTTGGGATCCTCGTGATCAT+GGG | 0.539317 | 4.4:+32832020 | MS.gene065793:CDS |
TAAAGGCTTCACCCTCCCAA+TGG | 0.540341 | 4.4:-32832165 | None:intergenic |
AGGATGTAAGGGAATATTGG+TGG | 0.540950 | 4.4:+32831904 | MS.gene065793:CDS |
GAAACTTGAATTGTGGAAAG+AGG | 0.542708 | 4.4:+32832651 | MS.gene065793:CDS |
TACGGTAATGACGACGGCGA+CGG | 0.544466 | 4.4:-32833920 | None:intergenic |
GGCGGAGCAGTCCACACCAC+AGG | 0.552096 | 4.4:+32832232 | MS.gene065793:CDS |
CGATGACGATTTGCCAGATG+GGG | 0.554351 | 4.4:+32833746 | MS.gene065793:CDS |
ACACACTTGCACATTGCACA+TGG | 0.554386 | 4.4:-32831296 | None:intergenic |
CTCGGGAACCTTATAGTGGT+GGG | 0.556218 | 4.4:+32832764 | MS.gene065793:CDS |
TCTCGGGAACCTTATAGTGG+TGG | 0.557452 | 4.4:+32832763 | MS.gene065793:CDS |
GCTCTCAAAAGTGAGGAAGA+AGG | 0.557493 | 4.4:+32832093 | MS.gene065793:CDS |
CATTGATGCAGTCCGTAAAG+AGG | 0.559031 | 4.4:+32832813 | MS.gene065793:CDS |
TAATGCAGGCTCAAGAACTT+GGG | 0.559518 | 4.4:+32832368 | MS.gene065793:intron |
CGAAGACAATTTGTTAGATG+GGG | 0.565203 | 4.4:+32833599 | MS.gene065793:CDS |
GGGTCTTAATGCCCATTGGG+AGG | 0.566029 | 4.4:+32832153 | MS.gene065793:CDS |
GGCTGCCGCAGCACATCAGG+AGG | 0.566647 | 4.4:+32832834 | MS.gene065793:CDS |
GAGTCTCGGGAACCTTATAG+TGG | 0.570097 | 4.4:+32832760 | MS.gene065793:CDS |
GAATTGTGGAAAGAGGTTGC+TGG | 0.573145 | 4.4:+32832658 | MS.gene065793:CDS |
GGCAGCCACAGCACGCCAGG+AGG | 0.574306 | 4.4:+32832876 | MS.gene065793:CDS |
AATGGTAAGGCCTCCCAGAA+CGG | 0.574382 | 4.4:+32832604 | MS.gene065793:CDS |
GACGATGACGATTTGCCAGA+TGG | 0.574633 | 4.4:+32833744 | MS.gene065793:CDS |
TGATGAGGATTCACTAGATG+AGG | 0.576767 | 4.4:+32833314 | MS.gene065793:CDS |
ATCAAAACCAAACTCAACTA+CGG | 0.579654 | 4.4:-32833938 | None:intergenic |
GGTACAAACACAAAATGGTA+AGG | 0.583099 | 4.4:+32832591 | MS.gene065793:CDS |
CCGCAAGGCTCATGTTGATG+TGG | 0.585666 | 4.4:+32832255 | MS.gene065793:CDS |
AGCAGCCTCCTGATGTGCTG+CGG | 0.589638 | 4.4:-32832839 | None:intergenic |
GAATCGGTGTCATCATAAAG+AGG | 0.589843 | 4.4:-32833876 | None:intergenic |
TGAGACCCCAGAGGATGTAA+GGG | 0.590171 | 4.4:+32831893 | MS.gene065793:CDS |
TCAAGAACTTGGGCGGTCTG+TGG | 0.591187 | 4.4:+32832378 | MS.gene065793:CDS |
GGAGTTTATTAAGAAGGCCA+AGG | 0.597232 | 4.4:+32831235 | MS.gene065793:CDS |
TTGTAGGTGGGCTCCTAGCG+CGG | 0.605332 | 4.4:+32831806 | MS.gene065793:intron |
AACATGAGCCTTGCGGCCTG+TGG | 0.606679 | 4.4:-32832248 | None:intergenic |
ACAATATCACGATCGTCTGA+AGG | 0.608845 | 4.4:+32832567 | MS.gene065793:CDS |
AGTCCACACCACAGGCCGCA+AGG | 0.611297 | 4.4:+32832240 | MS.gene065793:CDS |
GGGCGACGAAACTTGAATTG+TGG | 0.613873 | 4.4:+32832644 | MS.gene065793:CDS |
ACATCCTCGCTACGATGATG+AGG | 0.614505 | 4.4:+32833299 | MS.gene065793:CDS |
ATATTGGTGGAAGTTGTTTG+GGG | 0.616097 | 4.4:+32831917 | MS.gene065793:CDS |
TGTTGATGTGGCACTTAGCA+TGG | 0.616336 | 4.4:+32832267 | MS.gene065793:CDS |
ACATTATCACTATGATGATG+AGG | 0.618914 | 4.4:+32833230 | MS.gene065793:CDS |
TTACATATGTTGTTTGAGAG+CGG | 0.620785 | 4.4:-32832459 | None:intergenic |
GGTCTTAATGCCCATTGGGA+GGG | 0.621508 | 4.4:+32832154 | MS.gene065793:CDS |
CAGATATGCTCTCAAAAGTG+AGG | 0.622705 | 4.4:+32832086 | MS.gene065793:CDS |
ACCTCATTGGATATGTGAAG+AGG | 0.624423 | 4.4:+32832123 | MS.gene065793:CDS |
TCCTCGTCATTATCATGGTG+AGG | 0.625583 | 4.4:-32833513 | None:intergenic |
GATGATGACGATTTGCCAGA+CGG | 0.628419 | 4.4:+32833453 | MS.gene065793:CDS |
GCCATCCAGTCACACTTCCA+GGG | 0.630208 | 4.4:+32831852 | MS.gene065793:CDS |
TCCTCATCATTATCATAGTG+AGG | 0.630997 | 4.4:-32833804 | None:intergenic |
TTGATATACCCATGATCACG+AGG | 0.631630 | 4.4:-32832028 | None:intergenic |
TGATGAGGATTCGCTACATG+AGG | 0.633190 | 4.4:+32833818 | MS.gene065793:CDS |
GCCTCTTCACATATCCAATG+AGG | 0.635189 | 4.4:-32832124 | None:intergenic |
TGATCATGCTATGCATCTAG+AGG | 0.639265 | 4.4:+32832789 | MS.gene065793:CDS |
TCCCCATCATTATCATAGTG+AGG | 0.639323 | 4.4:-32833657 | None:intergenic |
AAGAATCATCAAGCTGAAAG+GGG | 0.641028 | 4.4:+32833702 | MS.gene065793:CDS |
TCCAGCGATAGAAAGGACCC+TGG | 0.641874 | 4.4:-32831869 | None:intergenic |
AAGCAACATCATGCTAAAAG+GGG | 0.645171 | 4.4:+32833414 | MS.gene065793:CDS |
ACAACATTATCAGCATTTGG+AGG | 0.645179 | 4.4:+32832912 | MS.gene065793:CDS |
AAGCATCATCAAGCTGAAAG+GGG | 0.649585 | 4.4:+32833276 | MS.gene065793:CDS |
ACCCTGGAAGTGTGACTGGA+TGG | 0.650411 | 4.4:-32831853 | None:intergenic |
TCCTCACTATGATAATGATG+AGG | 0.654946 | 4.4:+32833803 | MS.gene065793:CDS |
CCACATCAACATGAGCCTTG+CGG | 0.654991 | 4.4:-32832255 | None:intergenic |
CTCAACTACGGTAATGACGA+CGG | 0.657330 | 4.4:-32833926 | None:intergenic |
ATATGTGAAGAGGCTTGGAA+GGG | 0.657558 | 4.4:+32832133 | MS.gene065793:CDS |
TGCAGGCTCAAGAACTTGGG+CGG | 0.659117 | 4.4:+32832371 | MS.gene065793:intron |
TTGTGGAAAGAGGTTGCTGG+TGG | 0.660274 | 4.4:+32832661 | MS.gene065793:CDS |
AAGAATCATCAAGCTAAAAG+GGG | 0.661347 | 4.4:+32833558 | MS.gene065793:CDS |
AAGAATCATCAAGCTAAAAG+GGG | 0.661347 | 4.4:+32833849 | MS.gene065793:CDS |
TCGTCATCATCGTCATAGTG+AGG | 0.664947 | 4.4:-32833441 | None:intergenic |
CTGGTGGAAAGAGTCGAGGT+CGG | 0.666255 | 4.4:+32832677 | MS.gene065793:CDS |
TCTCAAAAGTGAGGAAGAAG+GGG | 0.667382 | 4.4:+32832095 | MS.gene065793:CDS |
TGACGAGGATTCGCTACATG+AGG | 0.668713 | 4.4:+32833527 | MS.gene065793:CDS |
AAGCAGCGTCAAGCTAAAAG+GGG | 0.671751 | 4.4:+32833345 | MS.gene065793:CDS |
TTGTCTTCGTCATCATAGTG+AGG | 0.672385 | 4.4:-32833585 | None:intergenic |
CGACGACGACTCTCTAGATG+AGG | 0.674837 | 4.4:+32833383 | MS.gene065793:CDS |
TCCTCACTATGATAATGATG+GGG | 0.674907 | 4.4:+32833656 | MS.gene065793:CDS |
GCGAAGTTACACCACGCCGG+AGG | 0.675552 | 4.4:-32832729 | None:intergenic |
CTCCTGCATCCCGTTCTGGG+AGG | 0.677042 | 4.4:-32832614 | None:intergenic |
CGGGATGCAGGAGATAGATG+GGG | 0.677483 | 4.4:+32832624 | MS.gene065793:CDS |
GTTGCTGGTGGAAAGAGTCG+AGG | 0.681260 | 4.4:+32832673 | MS.gene065793:CDS |
AATCGTAATTCGTGTAAAGG+CGG | 0.682791 | 4.4:+32832214 | MS.gene065793:CDS |
TCATCGTCATCATCATAGTG+AGG | 0.683389 | 4.4:-32833729 | None:intergenic |
GAATGGTCATCATCATAGCG+AGG | 0.683926 | 4.4:-32833075 | None:intergenic |
ATATCACGATCGTCTGAAGG+AGG | 0.686760 | 4.4:+32832570 | MS.gene065793:CDS |
TCCTCACCATGATAATGACG+AGG | 0.694396 | 4.4:+32833512 | MS.gene065793:CDS |
GAATCCTCATCATCGTAGCG+AGG | 0.696997 | 4.4:-32833303 | None:intergenic |
AGTGCGAGTCAAGCTCGCAG+GGG | 0.697262 | 4.4:+32833048 | MS.gene065793:CDS |
TTTGCTTTAAACCTCCGGCG+TGG | 0.698945 | 4.4:+32832718 | MS.gene065793:CDS |
TGATGACGATTTGCCAGACG+GGG | 0.703928 | 4.4:+32833455 | MS.gene065793:CDS |
TGACACCGATTCACTAGACG+AGG | 0.704444 | 4.4:+32833887 | MS.gene065793:CDS |
AGTGTGAGTCAAGCTCGCAG+GGG | 0.725594 | 4.4:+32833000 | MS.gene065793:CDS |
ATATTCCCTTACATCCTCTG+GGG | 0.728189 | 4.4:-32831898 | None:intergenic |
TGATGGGGATTCGTTACACG+AGG | 0.732844 | 4.4:+32833671 | MS.gene065793:CDS |
TCAGCGAAGTTACACCACGC+CGG | 0.737989 | 4.4:-32832732 | None:intergenic |
TCGCTGGAGTGAGACCCCAG+AGG | 0.762521 | 4.4:+32831884 | MS.gene065793:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAATATAAAAAATATAA+GGG | - | chr4.4:32832493-32832512 | None:intergenic | 0.0% |
!! | TATATAATATAAAAAATATA+AGG | - | chr4.4:32832494-32832513 | None:intergenic | 0.0% |
!!! | GTTGTTTTTTAATTTAATGC+AGG | + | chr4.4:32832354-32832373 | MS.gene065793:intron | 20.0% |
!!! | TGATATTGTTTCTAGAAAAA+AGG | - | chr4.4:32832556-32832575 | None:intergenic | 20.0% |
! | AAACAACATATGTAAGTTGT+TGG | + | chr4.4:32832467-32832486 | MS.gene065793:intron | 25.0% |
! | AAAGAATCATCAAGCTAAAA+GGG | + | chr4.4:32833557-32833576 | MS.gene065793:CDS | 25.0% |
! | CTCTTGAACAAAATGATATT+AGG | + | chr4.4:32832522-32832541 | MS.gene065793:intron | 25.0% |
! | TAACTAGTTATCGTTATGTA+GGG | - | chr4.4:32831976-32831995 | None:intergenic | 25.0% |
! | TTGACTAGAGATCTTTATAA+AGG | - | chr4.4:32832185-32832204 | None:intergenic | 25.0% |
! | TTGAGCAAAATATTTGTCTA+GGG | + | chr4.4:32831408-32831427 | MS.gene065793:intron | 25.0% |
!!! | ACTAGTTAGATTCCTTTTTT+AGG | + | chr4.4:32831988-32832007 | MS.gene065793:intron | 25.0% |
!!! | ATTTAGTTTGGACTTTTTGT+AGG | + | chr4.4:32831790-32831809 | MS.gene065793:intron | 25.0% |
AAAAAGACGTTTCAAACAAG+AGG | + | chr4.4:32832049-32832068 | MS.gene065793:CDS | 30.0% | |
AAAACTCATTTGTACAAGAG+TGG | + | chr4.4:32831344-32831363 | MS.gene065793:intron | 30.0% | |
AAACTCATTTGTACAAGAGT+GGG | + | chr4.4:32831345-32831364 | MS.gene065793:intron | 30.0% | |
AAAGAATCATCAAGCTGAAA+GGG | + | chr4.4:32833701-32833720 | MS.gene065793:CDS | 30.0% | |
AAAGCAACATCATGCTAAAA+GGG | + | chr4.4:32833413-32833432 | MS.gene065793:CDS | 30.0% | |
AACTAGTTATCGTTATGTAG+GGG | - | chr4.4:32831975-32831994 | None:intergenic | 30.0% | |
AAGAATCATCAAGCTAAAAG+GGG | + | chr4.4:32833558-32833577 | MS.gene065793:CDS | 30.0% | |
AAGCAATCTTGTCCTAAAAA+AGG | - | chr4.4:32832003-32832022 | None:intergenic | 30.0% | |
AATATTGGTGGAAGTTGTTT+GGG | + | chr4.4:32831916-32831935 | MS.gene065793:CDS | 30.0% | |
AGTTCAGGAGTTTATTAAGA+AGG | + | chr4.4:32831229-32831248 | MS.gene065793:CDS | 30.0% | |
CAAAGAATCATCAAGCTAAA+AGG | + | chr4.4:32833556-32833575 | MS.gene065793:CDS | 30.0% | |
CTAACTAGTTATCGTTATGT+AGG | - | chr4.4:32831977-32831996 | None:intergenic | 30.0% | |
CTTGAGCAAAATATTTGTCT+AGG | + | chr4.4:32831407-32831426 | MS.gene065793:intron | 30.0% | |
GAAACAACATTATCAGCATT+TGG | + | chr4.4:32832909-32832928 | MS.gene065793:CDS | 30.0% | |
TGGGTTTCAACTAAACTATA+TGG | + | chr4.4:32831364-32831383 | MS.gene065793:intron | 30.0% | |
TTCAACTAAACTATATGGTC+TGG | + | chr4.4:32831369-32831388 | MS.gene065793:intron | 30.0% | |
! | ACATTATCACTATGATGATG+AGG | + | chr4.4:32833230-32833249 | MS.gene065793:CDS | 30.0% |
! | ATCCTCACTATGATAATGAT+GGG | + | chr4.4:32833655-32833674 | MS.gene065793:CDS | 30.0% |
! | TTACATATGTTGTTTGAGAG+CGG | - | chr4.4:32832462-32832481 | None:intergenic | 30.0% |
! | TTGATGGTTGACATTTAGTT+TGG | + | chr4.4:32831778-32831797 | MS.gene065793:intron | 30.0% |
!! | ACGAAGACAATTTGTTAGAT+GGG | + | chr4.4:32833598-32833617 | MS.gene065793:CDS | 30.0% |
!!! | CTTTTAGCTTGATGATTCTT+TGG | - | chr4.4:32833558-32833577 | None:intergenic | 30.0% |
!!! | TTTTTAGGACAAGATTGCTT+GGG | + | chr4.4:32832003-32832022 | MS.gene065793:intron | 30.0% |
!!! | TTTTTTAGGACAAGATTGCT+TGG | + | chr4.4:32832002-32832021 | MS.gene065793:intron | 30.0% |
AAAGTCTTTAACTCCAAGAG+AGG | + | chr4.4:32831319-32831338 | MS.gene065793:intron | 35.0% | |
AAGAATCATCAAGCTGAAAG+GGG | + | chr4.4:32833702-32833721 | MS.gene065793:CDS | 35.0% | |
AAGCAACATCATGCTAAAAG+GGG | + | chr4.4:32833414-32833433 | MS.gene065793:CDS | 35.0% | |
AATATTCCCTTACATCCTCT+GGG | - | chr4.4:32831902-32831921 | None:intergenic | 35.0% | |
AATCGTAATTCGTGTAAAGG+CGG | + | chr4.4:32832214-32832233 | MS.gene065793:CDS | 35.0% | |
ACAACATTATCAGCATTTGG+AGG | + | chr4.4:32832912-32832931 | MS.gene065793:CDS | 35.0% | |
ACCAATCGTAATTCGTGTAA+AGG | + | chr4.4:32832211-32832230 | MS.gene065793:CDS | 35.0% | |
ATAAAAGGAAGTCTGGCAAT+TGG | + | chr4.4:32832428-32832447 | MS.gene065793:CDS | 35.0% | |
ATATTGGTGGAAGTTGTTTG+GGG | + | chr4.4:32831917-32831936 | MS.gene065793:CDS | 35.0% | |
ATCGAATAGCAGTAGACATA+TGG | + | chr4.4:32831436-32831455 | MS.gene065793:intron | 35.0% | |
CAAAGAATCATCAAGCTGAA+AGG | + | chr4.4:32833700-32833719 | MS.gene065793:CDS | 35.0% | |
CAAAGCAACATCATGCTAAA+AGG | + | chr4.4:32833412-32833431 | MS.gene065793:CDS | 35.0% | |
CTAGATGTTTCTTTCTTCGA+CGG | - | chr4.4:32833122-32833141 | None:intergenic | 35.0% | |
GAAACTTGAATTGTGGAAAG+AGG | + | chr4.4:32832651-32832670 | MS.gene065793:CDS | 35.0% | |
GAATATTGGTGGAAGTTGTT+TGG | + | chr4.4:32831915-32831934 | MS.gene065793:CDS | 35.0% | |
GGTACAAACACAAAATGGTA+AGG | + | chr4.4:32832591-32832610 | MS.gene065793:CDS | 35.0% | |
TAAAAGGAAGTCTGGCAATT+GGG | + | chr4.4:32832429-32832448 | MS.gene065793:CDS | 35.0% | |
TCCTCATCATTATCATAGTG+AGG | - | chr4.4:32833807-32833826 | None:intergenic | 35.0% | |
TTTCTCTCAGACAAAAAGCA+GGG | - | chr4.4:32831266-32831285 | None:intergenic | 35.0% | |
! | AAAGCATCATCAAGCTGAAA+GGG | + | chr4.4:32833275-32833294 | MS.gene065793:CDS | 35.0% |
! | AAATGAGTTTTCACCTCTCT+TGG | - | chr4.4:32831335-32831354 | None:intergenic | 35.0% |
! | AAGGAGGTACAAACACAAAA+TGG | + | chr4.4:32832586-32832605 | MS.gene065793:CDS | 35.0% |
! | AATTGCCAGACTTCCTTTTA+TGG | - | chr4.4:32832429-32832448 | None:intergenic | 35.0% |
! | AGTTTGGACTTTTTGTAGGT+GGG | + | chr4.4:32831794-32831813 | MS.gene065793:intron | 35.0% |
! | ATTGCCAGACTTCCTTTTAT+GGG | - | chr4.4:32832428-32832447 | None:intergenic | 35.0% |
! | CATCCTCACTATGATAATGA+TGG | + | chr4.4:32833654-32833673 | MS.gene065793:CDS | 35.0% |
! | CTTTCAGCTTGATGATTCTT+TGG | - | chr4.4:32833702-32833721 | None:intergenic | 35.0% |
! | TAGTTTGGACTTTTTGTAGG+TGG | + | chr4.4:32831793-32831812 | MS.gene065793:intron | 35.0% |
! | TCCTCACTATGATAATGATG+AGG | + | chr4.4:32833656-32833675 | MS.gene065793:CDS | 35.0% |
! | TCCTCACTATGATAATGATG+GGG | + | chr4.4:32833656-32833675 | MS.gene065793:CDS | 35.0% |
! | TCTTGTGAGCTTGATGTTTT+TGG | - | chr4.4:32833209-32833228 | None:intergenic | 35.0% |
!! | CGAAGACAATTTGTTAGATG+GGG | + | chr4.4:32833599-32833618 | MS.gene065793:CDS | 35.0% |
!! | CTTTTAGCATGATGTTGCTT+TGG | - | chr4.4:32833414-32833433 | None:intergenic | 35.0% |
!! | CTTTTGAGAGCATATCTGAA+AGG | - | chr4.4:32832084-32832103 | None:intergenic | 35.0% |
!! | GAAAGAAACATCTAGCTCTA+AGG | + | chr4.4:32833127-32833146 | MS.gene065793:CDS | 35.0% |
!! | GACGAAGACAATTTGTTAGA+TGG | + | chr4.4:32833597-32833616 | MS.gene065793:CDS | 35.0% |
!! | TCTGAAACTTGGAGAGTTTT+GGG | - | chr4.4:32831614-32831633 | None:intergenic | 35.0% |
!! | TCTTTTTAGCCACCCATAAA+AGG | + | chr4.4:32832413-32832432 | MS.gene065793:CDS | 35.0% |
!!! | TTTTTAGCTTGACGTTGCTT+TGG | - | chr4.4:32833777-32833796 | None:intergenic | 35.0% |
!!! | TTTTTAGCTTGAGGTTGCTT+TGG | - | chr4.4:32833630-32833649 | None:intergenic | 35.0% |
!!! | TTTTTAGCTTGTCGTTGCTT+TGG | - | chr4.4:32833486-32833505 | None:intergenic | 35.0% |
AAAGCAGCGTCAAGCTAAAA+GGG | + | chr4.4:32833344-32833363 | MS.gene065793:CDS | 40.0% | |
AAGCATCATCAAGCTGAAAG+GGG | + | chr4.4:32833276-32833295 | MS.gene065793:CDS | 40.0% | |
ACAATATCACGATCGTCTGA+AGG | + | chr4.4:32832567-32832586 | MS.gene065793:CDS | 40.0% | |
ACCTCATTGGATATGTGAAG+AGG | + | chr4.4:32832123-32832142 | MS.gene065793:CDS | 40.0% | |
AGCAACGACAAGCTAAAAAG+CGG | + | chr4.4:32833487-32833506 | MS.gene065793:CDS | 40.0% | |
AGGATGTAAGGGAATATTGG+TGG | + | chr4.4:32831904-32831923 | MS.gene065793:CDS | 40.0% | |
ATAACTTACCCTAGACCACA+GGG | - | chr4.4:32831671-32831690 | None:intergenic | 40.0% | |
ATATGTGAAGAGGCTTGGAA+GGG | + | chr4.4:32832133-32832152 | MS.gene065793:CDS | 40.0% | |
ATATTCCCTTACATCCTCTG+GGG | - | chr4.4:32831901-32831920 | None:intergenic | 40.0% | |
ATTGGATATGTGAAGAGGCT+TGG | + | chr4.4:32832128-32832147 | MS.gene065793:CDS | 40.0% | |
CAATATTCCCTTACATCCTC+TGG | - | chr4.4:32831903-32831922 | None:intergenic | 40.0% | |
CAGAGGATGTAAGGGAATAT+TGG | + | chr4.4:32831901-32831920 | MS.gene065793:CDS | 40.0% | |
CAGATATGCTCTCAAAAGTG+AGG | + | chr4.4:32832086-32832105 | MS.gene065793:CDS | 40.0% | |
CTAAGAACTCGTCTAGTGAA+TGG | - | chr4.4:32833095-32833114 | None:intergenic | 40.0% | |
CTCTCAAAAGTGAGGAAGAA+GGG | + | chr4.4:32832094-32832113 | MS.gene065793:CDS | 40.0% | |
CTGATGGGAAGGTTCTTATA+CGG | + | chr4.4:32831645-32831664 | MS.gene065793:intron | 40.0% | |
CTTTCTCTCAGACAAAAAGC+AGG | - | chr4.4:32831267-32831286 | None:intergenic | 40.0% | |
GAATAGCAGTAGACATATGG+AGG | + | chr4.4:32831439-32831458 | MS.gene065793:intron | 40.0% | |
GCCTTTACACGAATTACGAT+TGG | - | chr4.4:32832215-32832234 | None:intergenic | 40.0% | |
GGAGTTTATTAAGAAGGCCA+AGG | + | chr4.4:32831235-32831254 | MS.gene065793:CDS | 40.0% | |
TAAGACCTCGTCTAGTGAAT+CGG | - | chr4.4:32833895-32833914 | None:intergenic | 40.0% | |
TAATGCAGGCTCAAGAACTT+GGG | + | chr4.4:32832368-32832387 | MS.gene065793:intron | 40.0% | |
TATAACTTACCCTAGACCAC+AGG | - | chr4.4:32831672-32831691 | None:intergenic | 40.0% | |
TCATACAGAGGATTCAGAAG+AGG | + | chr4.4:32831580-32831599 | MS.gene065793:intron | 40.0% | |
TCATATGGAGGAATCAGAAG+AGG | + | chr4.4:32831520-32831539 | MS.gene065793:intron | 40.0% | |
TCATCGTCATCATCATAGTG+AGG | - | chr4.4:32833732-32833751 | None:intergenic | 40.0% | |
TCCCCATCATTATCATAGTG+AGG | - | chr4.4:32833660-32833679 | None:intergenic | 40.0% | |
TCCTCCATATGAGGAACTTT+GGG | - | chr4.4:32831512-32831531 | None:intergenic | 40.0% | |
TCTCAAAAGTGAGGAAGAAG+GGG | + | chr4.4:32832095-32832114 | MS.gene065793:CDS | 40.0% | |
TCTTCTGAATCCTCTGTATG+AGG | - | chr4.4:32831581-32831600 | None:intergenic | 40.0% | |
TCTTCTGATTCCTCCATATG+AGG | - | chr4.4:32831521-32831540 | None:intergenic | 40.0% | |
TGATCATGCTATGCATCTAG+AGG | + | chr4.4:32832789-32832808 | MS.gene065793:CDS | 40.0% | |
TGATGAGGATTCACTAGATG+AGG | + | chr4.4:32833314-32833333 | MS.gene065793:CDS | 40.0% | |
TTAATGCAGGCTCAAGAACT+TGG | + | chr4.4:32832367-32832386 | MS.gene065793:intron | 40.0% | |
TTCCTCCATATGAGGAACTT+TGG | - | chr4.4:32831513-32831532 | None:intergenic | 40.0% | |
TTGATATACCCATGATCACG+AGG | - | chr4.4:32832031-32832050 | None:intergenic | 40.0% | |
TTGTCTTCGTCATCATAGTG+AGG | - | chr4.4:32833588-32833607 | None:intergenic | 40.0% | |
! | ACCTCCATATGTGGAGTTTT+GGG | - | chr4.4:32831473-32831492 | None:intergenic | 40.0% |
! | ATCCTCTGTATGAGGAGTTT+TGG | - | chr4.4:32831573-32831592 | None:intergenic | 40.0% |
! | CAAAGCATCATCAAGCTGAA+AGG | + | chr4.4:32833274-32833293 | MS.gene065793:CDS | 40.0% |
! | CAGACTTTGCTTTAAACCTC+CGG | + | chr4.4:32832713-32832732 | MS.gene065793:CDS | 40.0% |
! | CATTCTGCTTGTCTGAAACT+TGG | - | chr4.4:32831625-32831644 | None:intergenic | 40.0% |
! | TCCTCTGTATGAGGAGTTTT+GGG | - | chr4.4:32831572-32831591 | None:intergenic | 40.0% |
!! | CTTTCAGCTTGATGATGCTT+TGG | - | chr4.4:32833276-32833295 | None:intergenic | 40.0% |
!! | GAATCGGTGTCATCATAAAG+AGG | - | chr4.4:32833879-32833898 | None:intergenic | 40.0% |
!! | GTCTGAAACTTGGAGAGTTT+TGG | - | chr4.4:32831615-32831634 | None:intergenic | 40.0% |
!! | TGAGTTTGTTAGTGGAGTTC+AGG | + | chr4.4:32831214-32831233 | MS.gene065793:CDS | 40.0% |
AAGCAGCGTCAAGCTAAAAG+GGG | + | chr4.4:32833345-32833364 | MS.gene065793:CDS | 45.0% | |
ACACACTTGCACATTGCACA+TGG | - | chr4.4:32831299-32831318 | None:intergenic | 45.0% | |
ACGATGACGATTTGCCAGAT+GGG | + | chr4.4:32833745-32833764 | MS.gene065793:CDS | 45.0% | |
ATATCACGATCGTCTGAAGG+AGG | + | chr4.4:32832570-32832589 | MS.gene065793:CDS | 45.0% | |
CAAAAAGCAGGGTTGTTCCT+TGG | - | chr4.4:32831255-32831274 | None:intergenic | 45.0% | |
CAAAGCAGCGTCAAGCTAAA+AGG | + | chr4.4:32833343-32833362 | MS.gene065793:CDS | 45.0% | |
CAGACAAGCAGAATGCTGAT+GGG | + | chr4.4:32831630-32831649 | MS.gene065793:intron | 45.0% | |
CATTGATGCAGTCCGTAAAG+AGG | + | chr4.4:32832813-32832832 | MS.gene065793:CDS | 45.0% | |
GAAGGGTCTTAATGCCCATT+GGG | + | chr4.4:32832150-32832169 | MS.gene065793:CDS | 45.0% | |
GAATGGTCATCATCATAGCG+AGG | - | chr4.4:32833078-32833097 | None:intergenic | 45.0% | |
GAATTGTGGAAAGAGGTTGC+TGG | + | chr4.4:32832658-32832677 | MS.gene065793:CDS | 45.0% | |
GATATGTGAAGAGGCTTGGA+AGG | + | chr4.4:32832132-32832151 | MS.gene065793:CDS | 45.0% | |
GCCTCTTCACATATCCAATG+AGG | - | chr4.4:32832127-32832146 | None:intergenic | 45.0% | |
GCGAATCCTCGTCATTATCA+TGG | - | chr4.4:32833521-32833540 | None:intergenic | 45.0% | |
GCTCTCAAAAGTGAGGAAGA+AGG | + | chr4.4:32832093-32832112 | MS.gene065793:CDS | 45.0% | |
GGATCCCAAAACTCCACATA+TGG | + | chr4.4:32831466-32831485 | MS.gene065793:intron | 45.0% | |
GGATCCCAAAGTTCCTCATA+TGG | + | chr4.4:32831505-32831524 | MS.gene065793:intron | 45.0% | |
GGTGGCTAAAAAGAGCTCAT+CGG | - | chr4.4:32832407-32832426 | None:intergenic | 45.0% | |
GTGGCTAAAAAGAGCTCATC+GGG | - | chr4.4:32832406-32832425 | None:intergenic | 45.0% | |
TACAGAGGATTCAGAAGAGG+AGG | + | chr4.4:32831583-32831602 | MS.gene065793:intron | 45.0% | |
TAGCAGTAGACATATGGAGG+AGG | + | chr4.4:32831442-32831461 | MS.gene065793:intron | 45.0% | |
TATATGGTCTGGACTGAGCA+TGG | + | chr4.4:32831380-32831399 | MS.gene065793:intron | 45.0% | |
TATGGAGGAATCAGAAGAGG+AGG | + | chr4.4:32831523-32831542 | MS.gene065793:intron | 45.0% | |
TCAGACAAGCAGAATGCTGA+TGG | + | chr4.4:32831629-32831648 | MS.gene065793:intron | 45.0% | |
TCCCAAAACTCCACATATGG+AGG | + | chr4.4:32831469-32831488 | MS.gene065793:intron | 45.0% | |
TCCCAAAACTCCTCATACAG+AGG | + | chr4.4:32831568-32831587 | MS.gene065793:intron | 45.0% | |
TCCCAAAGTTCCTCATATGG+AGG | + | chr4.4:32831508-32831527 | MS.gene065793:intron | 45.0% | |
TCCTCGTCATTATCATGGTG+AGG | - | chr4.4:32833516-32833535 | None:intergenic | 45.0% | |
TCGTCATCATCGTCATAGTG+AGG | - | chr4.4:32833444-32833463 | None:intergenic | 45.0% | |
TGATCACACCCACCACTATA+AGG | - | chr4.4:32832775-32832794 | None:intergenic | 45.0% | |
TGATGAGGATTCGCTACATG+AGG | + | chr4.4:32833818-32833837 | MS.gene065793:CDS | 45.0% | |
TGCTTTGGTAAAACCCCATC+TGG | - | chr4.4:32833615-32833634 | None:intergenic | 45.0% | |
TGTGTGTGTGTGTGTGTTGA+TGG | + | chr4.4:32831762-32831781 | MS.gene065793:intron | 45.0% | |
TGTTGATGTGGCACTTAGCA+TGG | + | chr4.4:32832267-32832286 | MS.gene065793:CDS | 45.0% | |
! | ATGATGACGATTTGCCAGAC+GGG | + | chr4.4:32833454-32833473 | MS.gene065793:CDS | 45.0% |
! | CACCTCCATATGTGGAGTTT+TGG | - | chr4.4:32831474-32831493 | None:intergenic | 45.0% |
! | CTATGATGATGAGGATTCGC+TGG | + | chr4.4:32833239-32833258 | MS.gene065793:CDS | 45.0% |
! | CTCTTTACGGACTGCATCAA+TGG | - | chr4.4:32832815-32832834 | None:intergenic | 45.0% |
! | GATGATGACGATTTGCCAGA+CGG | + | chr4.4:32833453-32833472 | MS.gene065793:CDS | 45.0% |
! | TCCTCACCATGATAATGACG+AGG | + | chr4.4:32833512-32833531 | MS.gene065793:CDS | 45.0% |
!! | TTGTGAAAGCACCTGCTGAT+TGG | - | chr4.4:32832981-32833000 | None:intergenic | 45.0% |
!!! | CTTTTAGCTTGACGCTGCTT+TGG | - | chr4.4:32833345-32833364 | None:intergenic | 45.0% |
!!! | GAGCTTGATGTTTTTGGCGA+CGG | - | chr4.4:32833203-32833222 | None:intergenic | 45.0% |
!!! | GATGTTTTTGGCGACGGTTT+GGG | - | chr4.4:32833197-32833216 | None:intergenic | 45.0% |
!!! | GGATGTCGCTTTTTAGCTTG+AGG | - | chr4.4:32833639-32833658 | None:intergenic | 45.0% |
!!! | TGATGTTTTTGGCGACGGTT+TGG | - | chr4.4:32833198-32833217 | None:intergenic | 45.0% |
AAAGGCTTCACCCTCCCAAT+GGG | - | chr4.4:32832167-32832186 | None:intergenic | 50.0% | |
AACGGGATGCAGGAGATAGA+TGG | + | chr4.4:32832622-32832641 | MS.gene065793:CDS | 50.0% | |
AAGGTTCTTATACGGCCCTG+TGG | + | chr4.4:32831653-32831672 | MS.gene065793:intron | 50.0% | |
AAGTGTGAGTCAAGCTCGCA+GGG | + | chr4.4:32832999-32833018 | MS.gene065793:CDS | 50.0% | |
AATGGTAAGGCCTCCCAGAA+CGG | + | chr4.4:32832604-32832623 | MS.gene065793:CDS | 50.0% | |
ACATCCTCGCTACGATGATG+AGG | + | chr4.4:32833299-32833318 | MS.gene065793:CDS | 50.0% | |
ACGGGATGCAGGAGATAGAT+GGG | + | chr4.4:32832623-32832642 | MS.gene065793:CDS | 50.0% | |
AGAGGAGGAGGAATCAGAAG+AGG | + | chr4.4:32831538-32831557 | MS.gene065793:intron | 50.0% | |
AGAGGATTCAGAAGAGGAGG+AGG | + | chr4.4:32831586-32831605 | MS.gene065793:intron | 50.0% | |
CAAGCAGAATGCTGATGGGA+AGG | + | chr4.4:32831634-32831653 | MS.gene065793:intron | 50.0% | |
CAGTAGACATATGGAGGAGG+AGG | + | chr4.4:32831445-32831464 | MS.gene065793:intron | 50.0% | |
CCACATCAACATGAGCCTTG+CGG | - | chr4.4:32832258-32832277 | None:intergenic | 50.0% | |
CGATGACGATTTGCCAGATG+GGG | + | chr4.4:32833746-32833765 | MS.gene065793:CDS | 50.0% | |
CTCGGGAACCTTATAGTGGT+GGG | + | chr4.4:32832764-32832783 | MS.gene065793:CDS | 50.0% | |
CTTGGGATCCTCGTGATCAT+GGG | + | chr4.4:32832020-32832039 | MS.gene065793:CDS | 50.0% | |
GAATCCTCATCATCGTAGCG+AGG | - | chr4.4:32833306-32833325 | None:intergenic | 50.0% | |
GACGATGACGATTTGCCAGA+TGG | + | chr4.4:32833744-32833763 | MS.gene065793:CDS | 50.0% | |
GAGTCTCGGGAACCTTATAG+TGG | + | chr4.4:32832760-32832779 | MS.gene065793:CDS | 50.0% | |
GCCACCCATAAAAGGAAGTC+TGG | + | chr4.4:32832421-32832440 | MS.gene065793:CDS | 50.0% | |
GGAAGGGTCTTAATGCCCAT+TGG | + | chr4.4:32832149-32832168 | MS.gene065793:CDS | 50.0% | |
GGGCGACGAAACTTGAATTG+TGG | + | chr4.4:32832644-32832663 | MS.gene065793:CDS | 50.0% | |
GGTCTTAATGCCCATTGGGA+GGG | + | chr4.4:32832154-32832173 | MS.gene065793:CDS | 50.0% | |
GTCTCACTCCAGCGATAGAA+AGG | - | chr4.4:32831879-32831898 | None:intergenic | 50.0% | |
TAAAGGCTTCACCCTCCCAA+TGG | - | chr4.4:32832168-32832187 | None:intergenic | 50.0% | |
TATCTCCTGCATCCCGTTCT+GGG | - | chr4.4:32832620-32832639 | None:intergenic | 50.0% | |
TCTCGGGAACCTTATAGTGG+TGG | + | chr4.4:32832763-32832782 | MS.gene065793:CDS | 50.0% | |
TCTTCCTGCACCTCCATATG+TGG | - | chr4.4:32831482-32831501 | None:intergenic | 50.0% | |
TGACGAGGATTCGCTACATG+AGG | + | chr4.4:32833527-32833546 | MS.gene065793:CDS | 50.0% | |
TGAGACCCCAGAGGATGTAA+GGG | + | chr4.4:32831893-32831912 | MS.gene065793:CDS | 50.0% | |
TGATGGGGATTCGTTACACG+AGG | + | chr4.4:32833671-32833690 | MS.gene065793:CDS | 50.0% | |
TTATACGGCCCTGTGGTCTA+GGG | + | chr4.4:32831660-32831679 | MS.gene065793:intron | 50.0% | |
TTGTGGAAAGAGGTTGCTGG+TGG | + | chr4.4:32832661-32832680 | MS.gene065793:CDS | 50.0% | |
! | AACTCCACATATGGAGGTGC+AGG | + | chr4.4:32831475-32831494 | MS.gene065793:intron | 50.0% |
! | ACATATGGAGGTGCAGGAAG+AGG | + | chr4.4:32831481-32831500 | MS.gene065793:intron | 50.0% |
! | GCCAGACTTCCTTTTATGGG+TGG | - | chr4.4:32832425-32832444 | None:intergenic | 50.0% |
! | TGATGACGATTTGCCAGACG+GGG | + | chr4.4:32833455-32833474 | MS.gene065793:CDS | 50.0% |
! | TTTGCTTTAAACCTCCGGCG+TGG | + | chr4.4:32832718-32832737 | MS.gene065793:CDS | 50.0% |
!! | AAGAGTCGAGGTCGGTGTTA+TGG | + | chr4.4:32832685-32832704 | MS.gene065793:CDS | 50.0% |
!! | TGACACCGATTCACTAGACG+AGG | + | chr4.4:32833887-32833906 | MS.gene065793:CDS | 50.0% |
!! | TGGTGTAACTTCGCTGACTC+AGG | + | chr4.4:32832738-32832757 | MS.gene065793:CDS | 50.0% |
AAGTGCGAGTCAAGCTCGCA+GGG | + | chr4.4:32833047-32833066 | MS.gene065793:CDS | 55.0% | |
AGAAGGGGACGAGACCTCAT+TGG | + | chr4.4:32832110-32832129 | MS.gene065793:CDS | 55.0% | |
AGTGTGAGTCAAGCTCGCAG+GGG | + | chr4.4:32833000-32833019 | MS.gene065793:CDS | 55.0% | |
ATGGTAAGGCCTCCCAGAAC+GGG | + | chr4.4:32832605-32832624 | MS.gene065793:CDS | 55.0% | |
CAAGTGTGAGTCAAGCTCGC+AGG | + | chr4.4:32832998-32833017 | MS.gene065793:CDS | 55.0% | |
CCGCAAGGCTCATGTTGATG+TGG | + | chr4.4:32832255-32832274 | MS.gene065793:CDS | 55.0% | |
CGACGACGACTCTCTAGATG+AGG | + | chr4.4:32833383-32833402 | MS.gene065793:CDS | 55.0% | |
CGGGATGCAGGAGATAGATG+GGG | + | chr4.4:32832624-32832643 | MS.gene065793:CDS | 55.0% | |
CTATCTCCTGCATCCCGTTC+TGG | - | chr4.4:32832621-32832640 | None:intergenic | 55.0% | |
CTGGTGGAAAGAGTCGAGGT+CGG | + | chr4.4:32832677-32832696 | MS.gene065793:CDS | 55.0% | |
CTTATACGGCCCTGTGGTCT+AGG | + | chr4.4:32831659-32831678 | MS.gene065793:intron | 55.0% | |
GCCATCCAGTCACACTTCCA+GGG | + | chr4.4:32831852-32831871 | MS.gene065793:CDS | 55.0% | |
GCGTGTTTAATCGCAGCAGC+AGG | - | chr4.4:32831834-32831853 | None:intergenic | 55.0% | |
GCTTGGGATCCTCGTGATCA+TGG | + | chr4.4:32832019-32832038 | MS.gene065793:CDS | 55.0% | |
GGAGGAATCAGAAGAGGAGG+AGG | + | chr4.4:32831526-32831545 | MS.gene065793:intron | 55.0% | |
GGAGGAGGAATCAGAAGAGG+AGG | + | chr4.4:32831541-32831560 | MS.gene065793:intron | 55.0% | |
GGGTCTTAATGCCCATTGGG+AGG | + | chr4.4:32832153-32832172 | MS.gene065793:CDS | 55.0% | |
GTGAGACCCCAGAGGATGTA+AGG | + | chr4.4:32831892-32831911 | MS.gene065793:CDS | 55.0% | |
GTTGCTGGTGGAAAGAGTCG+AGG | + | chr4.4:32832673-32832692 | MS.gene065793:CDS | 55.0% | |
TACGGTAATGACGACGGCGA+CGG | - | chr4.4:32833923-32833942 | None:intergenic | 55.0% | |
TCAAGAACTTGGGCGGTCTG+TGG | + | chr4.4:32832378-32832397 | MS.gene065793:CDS | 55.0% | |
TCAGCGAAGTTACACCACGC+CGG | - | chr4.4:32832735-32832754 | None:intergenic | 55.0% | |
TCCAGCGATAGAAAGGACCC+TGG | - | chr4.4:32831872-32831891 | None:intergenic | 55.0% | |
TCCAGGGTCCTTTCTATCGC+TGG | + | chr4.4:32831868-32831887 | MS.gene065793:CDS | 55.0% | |
TGCAGGCTCAAGAACTTGGG+CGG | + | chr4.4:32832371-32832390 | MS.gene065793:intron | 55.0% | |
TGCTTTGGTAAGACCCCGTC+TGG | - | chr4.4:32833471-32833490 | None:intergenic | 55.0% | |
! | AAGGACCCTGGAAGTGTGAC+TGG | - | chr4.4:32831860-32831879 | None:intergenic | 55.0% |
! | ACCCTGGAAGTGTGACTGGA+TGG | - | chr4.4:32831856-32831875 | None:intergenic | 55.0% |
! | TATGGAGGTGCAGGAAGAGG+AGG | + | chr4.4:32831484-32831503 | MS.gene065793:intron | 55.0% |
!! | CTTCGCTGACTCAGGAGTCT+CGG | + | chr4.4:32832746-32832765 | MS.gene065793:CDS | 55.0% |
!! | TTCGCTGACTCAGGAGTCTC+GGG | + | chr4.4:32832747-32832766 | MS.gene065793:CDS | 55.0% |
AACATGAGCCTTGCGGCCTG+TGG | - | chr4.4:32832251-32832270 | None:intergenic | 60.0% | |
ACGGTAATGACGACGGCGAC+GGG | - | chr4.4:32833922-32833941 | None:intergenic | 60.0% | |
AGCAGCCTCCTGATGTGCTG+CGG | - | chr4.4:32832842-32832861 | None:intergenic | 60.0% | |
AGTGCGAGTCAAGCTCGCAG+GGG | + | chr4.4:32833048-32833067 | MS.gene065793:CDS | 60.0% | |
CAAGTGCGAGTCAAGCTCGC+AGG | + | chr4.4:32833046-32833065 | MS.gene065793:CDS | 60.0% | |
CGCCATCCAGTCACACTTCC+AGG | + | chr4.4:32831851-32831870 | MS.gene065793:CDS | 60.0% | |
GTGCTGCGGCAGCCTCTTTA+CGG | - | chr4.4:32832828-32832847 | None:intergenic | 60.0% | |
GTTTCGACTCAGCTGCCTCC+TGG | - | chr4.4:32832894-32832913 | None:intergenic | 60.0% | |
! | TTGTAGGTGGGCTCCTAGCG+CGG | + | chr4.4:32831806-32831825 | MS.gene065793:intron | 60.0% |
!! | GCTCTAGAGCGCCAATCAGC+AGG | + | chr4.4:32832967-32832986 | MS.gene065793:CDS | 60.0% |
AGAGGCTGCCGCAGCACATC+AGG | + | chr4.4:32832831-32832850 | MS.gene065793:CDS | 65.0% | |
AGTCCACACCACAGGCCGCA+AGG | + | chr4.4:32832240-32832259 | MS.gene065793:CDS | 65.0% | |
GCGAAGTTACACCACGCCGG+AGG | - | chr4.4:32832732-32832751 | None:intergenic | 65.0% | |
TAATGACGACGGCGACGGGC+TGG | - | chr4.4:32833918-32833937 | None:intergenic | 65.0% | |
TCGCTGGAGTGAGACCCCAG+AGG | + | chr4.4:32831884-32831903 | MS.gene065793:CDS | 65.0% | |
! | CTCCTGCATCCCGTTCTGGG+AGG | - | chr4.4:32832617-32832636 | None:intergenic | 65.0% |
AGCTGCCTCCTGGCGTGCTG+TGG | - | chr4.4:32832884-32832903 | None:intergenic | 70.0% | |
CGCAGGGGACGCCAATCAGC+AGG | + | chr4.4:32833015-32833034 | MS.gene065793:CDS | 70.0% | |
GAGCCTTGCGGCCTGTGGTG+TGG | - | chr4.4:32832246-32832265 | None:intergenic | 70.0% | |
GGAGGCTGCTGCAGCACGTC+AGG | + | chr4.4:32832852-32832871 | MS.gene065793:CDS | 70.0% | |
GGCCTCCCAGAACGGGATGC+AGG | + | chr4.4:32832612-32832631 | MS.gene065793:CDS | 70.0% | |
GGCGGAGCAGTCCACACCAC+AGG | + | chr4.4:32832232-32832251 | MS.gene065793:CDS | 70.0% | |
GGCTGCCGCAGCACATCAGG+AGG | + | chr4.4:32832834-32832853 | MS.gene065793:CDS | 70.0% | |
GGCTGCTGCAGCACGTCAGG+AGG | + | chr4.4:32832855-32832874 | MS.gene065793:CDS | 70.0% | |
GGAGGCAGCCACAGCACGCC+AGG | + | chr4.4:32832873-32832892 | MS.gene065793:CDS | 75.0% | |
GGCAGCCACAGCACGCCAGG+AGG | + | chr4.4:32832876-32832895 | MS.gene065793:CDS | 75.0% | |
!! | GCAGCAGCAGGCGCCGCGCT+AGG | - | chr4.4:32831822-32831841 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 32831213 | 32833947 | 32831213 | ID=MS.gene065793 |
chr4.4 | mRNA | 32831213 | 32833947 | 32831213 | ID=MS.gene065793.t1;Parent=MS.gene065793 |
chr4.4 | exon | 32831213 | 32831316 | 32831213 | ID=MS.gene065793.t1.exon1;Parent=MS.gene065793.t1 |
chr4.4 | CDS | 32831213 | 32831316 | 32831213 | ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1 |
chr4.4 | exon | 32831812 | 32831938 | 32831812 | ID=MS.gene065793.t1.exon2;Parent=MS.gene065793.t1 |
chr4.4 | CDS | 32831812 | 32831938 | 32831812 | ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1 |
chr4.4 | exon | 32832010 | 32832288 | 32832010 | ID=MS.gene065793.t1.exon3;Parent=MS.gene065793.t1 |
chr4.4 | CDS | 32832010 | 32832288 | 32832010 | ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1 |
chr4.4 | exon | 32832376 | 32832477 | 32832376 | ID=MS.gene065793.t1.exon4;Parent=MS.gene065793.t1 |
chr4.4 | CDS | 32832376 | 32832477 | 32832376 | ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1 |
chr4.4 | exon | 32832565 | 32833947 | 32832565 | ID=MS.gene065793.t1.exon5;Parent=MS.gene065793.t1 |
chr4.4 | CDS | 32832565 | 32833947 | 32832565 | ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1 |
Gene Sequence |
Protein sequence |