AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065793


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065793.t1 MTR_2g436140 45.161 93 49 1 35 127 47 137 3.83e-18 87.0
MS.gene065793.t1 MTR_7g060170 50.000 82 39 1 214 295 6 85 3.85e-18 80.1
MS.gene065793.t1 MTR_7g074083 49.275 69 35 0 205 273 24 92 1.74e-16 76.3
MS.gene065793.t1 MTR_5g086820 55.556 54 24 0 220 273 39 92 1.04e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 184 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATCTCCTGCATCCCGTTC+TGG 0.201986 4.4:-32832618 None:intergenic
CAAAGAATCATCAAGCTAAA+AGG 0.225169 4.4:+32833556 MS.gene065793:CDS
CAAAGAATCATCAAGCTAAA+AGG 0.225169 4.4:+32833847 MS.gene065793:CDS
CAAAGCAACATCATGCTAAA+AGG 0.228413 4.4:+32833412 MS.gene065793:CDS
CTTTCAGCTTGATGATTCTT+TGG 0.237633 4.4:-32833699 None:intergenic
CAAAGCAGCGTCAAGCTAAA+AGG 0.248224 4.4:+32833343 MS.gene065793:CDS
GACGAAGACAATTTGTTAGA+TGG 0.302419 4.4:+32833597 MS.gene065793:CDS
TTGACTAGAGATCTTTATAA+AGG 0.315435 4.4:-32832182 None:intergenic
CGCCATCCAGTCACACTTCC+AGG 0.326768 4.4:+32831851 MS.gene065793:CDS
GAATATTGGTGGAAGTTGTT+TGG 0.327898 4.4:+32831915 MS.gene065793:CDS
TGAGTTTGTTAGTGGAGTTC+AGG 0.329607 4.4:+32831214 MS.gene065793:CDS
CTTTCAGCTTGATGATGCTT+TGG 0.336556 4.4:-32833273 None:intergenic
GTGCTGCGGCAGCCTCTTTA+CGG 0.338605 4.4:-32832825 None:intergenic
AATATTGGTGGAAGTTGTTT+GGG 0.347492 4.4:+32831916 MS.gene065793:CDS
AAAGAATCATCAAGCTAAAA+GGG 0.374571 4.4:+32833557 MS.gene065793:CDS
AAAGAATCATCAAGCTAAAA+GGG 0.374571 4.4:+32833848 MS.gene065793:CDS
GAAACAACATTATCAGCATT+TGG 0.377989 4.4:+32832909 MS.gene065793:CDS
CAATATTCCCTTACATCCTC+TGG 0.378318 4.4:-32831900 None:intergenic
TATCTCCTGCATCCCGTTCT+GGG 0.384815 4.4:-32832617 None:intergenic
AAGGAGGTACAAACACAAAA+TGG 0.387875 4.4:+32832586 MS.gene065793:CDS
GAAAGAAACATCTAGCTCTA+AGG 0.395879 4.4:+32833127 MS.gene065793:CDS
AACGGGATGCAGGAGATAGA+TGG 0.396181 4.4:+32832622 MS.gene065793:CDS
GGAGGCTGCTGCAGCACGTC+AGG 0.396719 4.4:+32832852 MS.gene065793:CDS
CAGAGGATGTAAGGGAATAT+TGG 0.403849 4.4:+32831901 MS.gene065793:CDS
TGATCACACCCACCACTATA+AGG 0.408691 4.4:-32832772 None:intergenic
AAGAGTCGAGGTCGGTGTTA+TGG 0.410049 4.4:+32832685 MS.gene065793:CDS
GTGAGACCCCAGAGGATGTA+AGG 0.413212 4.4:+32831892 MS.gene065793:CDS
AGAGGCTGCCGCAGCACATC+AGG 0.413600 4.4:+32832831 MS.gene065793:CDS
TCCAGGGTCCTTTCTATCGC+TGG 0.416171 4.4:+32831868 MS.gene065793:CDS
GTTTCGACTCAGCTGCCTCC+TGG 0.416729 4.4:-32832891 None:intergenic
ATAAAAGGAAGTCTGGCAAT+TGG 0.418430 4.4:+32832428 MS.gene065793:CDS
TGCTTTGGTAAGACCCCGTC+TGG 0.419898 4.4:-32833468 None:intergenic
TTAATGCAGGCTCAAGAACT+TGG 0.423789 4.4:+32832367 MS.gene065793:intron
GGAGGCAGCCACAGCACGCC+AGG 0.425194 4.4:+32832873 MS.gene065793:CDS
TGCTTTGGTAAAACCCCATC+TGG 0.426446 4.4:-32833759 None:intergenic
CGCAGGGGACGCCAATCAGC+AGG 0.428309 4.4:+32833015 MS.gene065793:CDS
ATGGTAAGGCCTCCCAGAAC+GGG 0.431393 4.4:+32832605 MS.gene065793:CDS
CTCTTTACGGACTGCATCAA+TGG 0.432826 4.4:-32832812 None:intergenic
GCTTGGGATCCTCGTGATCA+TGG 0.433534 4.4:+32832019 MS.gene065793:CDS
TTGAACTATGAGTTTGTTAG+TGG 0.434300 4.4:+32831206 None:intergenic
AAAGAATCATCAAGCTGAAA+GGG 0.439093 4.4:+32833701 MS.gene065793:CDS
AAAGCAACATCATGCTAAAA+GGG 0.442573 4.4:+32833413 MS.gene065793:CDS
AAAGCAGCGTCAAGCTAAAA+GGG 0.443246 4.4:+32833344 MS.gene065793:CDS
GCCACCCATAAAAGGAAGTC+TGG 0.448504 4.4:+32832421 MS.gene065793:CDS
TAAAAGGAAGTCTGGCAATT+GGG 0.451077 4.4:+32832429 MS.gene065793:CDS
GCTCTAGAGCGCCAATCAGC+AGG 0.461373 4.4:+32832967 MS.gene065793:CDS
CAGACTTTGCTTTAAACCTC+CGG 0.461416 4.4:+32832713 MS.gene065793:CDS
CTCTCAAAAGTGAGGAAGAA+GGG 0.464033 4.4:+32832094 MS.gene065793:CDS
ACGGTAATGACGACGGCGAC+GGG 0.464069 4.4:-32833919 None:intergenic
GCAGCAGCAGGCGCCGCGCT+AGG 0.466466 4.4:-32831819 None:intergenic
GAAGGGTCTTAATGCCCATT+GGG 0.467273 4.4:+32832150 MS.gene065793:CDS
TTCGCTGACTCAGGAGTCTC+GGG 0.469281 4.4:+32832747 MS.gene065793:CDS
ACGAAGACAATTTGTTAGAT+GGG 0.469400 4.4:+32833598 MS.gene065793:CDS
CATCCTCACTATGATAATGA+TGG 0.471233 4.4:+32833654 MS.gene065793:CDS
AAAGCATCATCAAGCTGAAA+GGG 0.476885 4.4:+32833275 MS.gene065793:CDS
GCGTGTTTAATCGCAGCAGC+AGG 0.479484 4.4:-32831831 None:intergenic
GTCTCACTCCAGCGATAGAA+AGG 0.483175 4.4:-32831876 None:intergenic
GGCTGCTGCAGCACGTCAGG+AGG 0.484517 4.4:+32832855 MS.gene065793:CDS
AGTTCAGGAGTTTATTAAGA+AGG 0.488470 4.4:+32831229 MS.gene065793:CDS
CTATGATGATGAGGATTCGC+TGG 0.489767 4.4:+32833239 MS.gene065793:CDS
CTTCGCTGACTCAGGAGTCT+CGG 0.490441 4.4:+32832746 MS.gene065793:CDS
TAATGACGACGGCGACGGGC+TGG 0.491841 4.4:-32833915 None:intergenic
GGCCTCCCAGAACGGGATGC+AGG 0.492623 4.4:+32832612 MS.gene065793:CDS
AGAAGGGGACGAGACCTCAT+TGG 0.497085 4.4:+32832110 MS.gene065793:CDS
GAGCCTTGCGGCCTGTGGTG+TGG 0.498769 4.4:-32832243 None:intergenic
ATTGGATATGTGAAGAGGCT+TGG 0.499061 4.4:+32832128 MS.gene065793:CDS
GGAAGGGTCTTAATGCCCAT+TGG 0.502764 4.4:+32832149 MS.gene065793:CDS
AAGGACCCTGGAAGTGTGAC+TGG 0.505631 4.4:-32831857 None:intergenic
CAAGTGTGAGTCAAGCTCGC+AGG 0.505729 4.4:+32832998 MS.gene065793:CDS
CAAGTGCGAGTCAAGCTCGC+AGG 0.505729 4.4:+32833046 MS.gene065793:CDS
GCCTTTACACGAATTACGAT+TGG 0.507806 4.4:-32832212 None:intergenic
AGCTGCCTCCTGGCGTGCTG+TGG 0.510431 4.4:-32832881 None:intergenic
GATATGTGAAGAGGCTTGGA+AGG 0.511244 4.4:+32832132 MS.gene065793:CDS
ATCCTCACTATGATAATGAT+GGG 0.512412 4.4:+32833655 MS.gene065793:CDS
CAAAGAATCATCAAGCTGAA+AGG 0.512957 4.4:+32833700 MS.gene065793:CDS
AATATTCCCTTACATCCTCT+GGG 0.513122 4.4:-32831899 None:intergenic
CTAGATGTTTCTTTCTTCGA+CGG 0.513717 4.4:-32833119 None:intergenic
TTGTGAAAGCACCTGCTGAT+TGG 0.515650 4.4:-32833026 None:intergenic
CTAAGAACTCGTCTAGTGAA+TGG 0.521135 4.4:-32833092 None:intergenic
ACCAATCGTAATTCGTGTAA+AGG 0.522365 4.4:+32832211 MS.gene065793:CDS
AAAGGCTTCACCCTCCCAAT+GGG 0.525570 4.4:-32832164 None:intergenic
TGGTGTAACTTCGCTGACTC+AGG 0.525580 4.4:+32832738 MS.gene065793:CDS
ACGGGATGCAGGAGATAGAT+GGG 0.528666 4.4:+32832623 MS.gene065793:CDS
AAGTGTGAGTCAAGCTCGCA+GGG 0.528888 4.4:+32832999 MS.gene065793:CDS
ATGATGACGATTTGCCAGAC+GGG 0.529560 4.4:+32833454 MS.gene065793:CDS
CAAAGCATCATCAAGCTGAA+AGG 0.530065 4.4:+32833274 MS.gene065793:CDS
GCGAATCCTCGTCATTATCA+TGG 0.530875 4.4:-32833518 None:intergenic
TAAGACCTCGTCTAGTGAAT+CGG 0.531398 4.4:-32833892 None:intergenic
ACGATGACGATTTGCCAGAT+GGG 0.532630 4.4:+32833745 MS.gene065793:CDS
TTGTGAAAGCACCTGCTGAT+TGG 0.534635 4.4:-32832978 None:intergenic
AAGTGCGAGTCAAGCTCGCA+GGG 0.535151 4.4:+32833047 MS.gene065793:CDS
CTTGGGATCCTCGTGATCAT+GGG 0.539317 4.4:+32832020 MS.gene065793:CDS
TAAAGGCTTCACCCTCCCAA+TGG 0.540341 4.4:-32832165 None:intergenic
AGGATGTAAGGGAATATTGG+TGG 0.540950 4.4:+32831904 MS.gene065793:CDS
GAAACTTGAATTGTGGAAAG+AGG 0.542708 4.4:+32832651 MS.gene065793:CDS
TACGGTAATGACGACGGCGA+CGG 0.544466 4.4:-32833920 None:intergenic
GGCGGAGCAGTCCACACCAC+AGG 0.552096 4.4:+32832232 MS.gene065793:CDS
CGATGACGATTTGCCAGATG+GGG 0.554351 4.4:+32833746 MS.gene065793:CDS
ACACACTTGCACATTGCACA+TGG 0.554386 4.4:-32831296 None:intergenic
CTCGGGAACCTTATAGTGGT+GGG 0.556218 4.4:+32832764 MS.gene065793:CDS
TCTCGGGAACCTTATAGTGG+TGG 0.557452 4.4:+32832763 MS.gene065793:CDS
GCTCTCAAAAGTGAGGAAGA+AGG 0.557493 4.4:+32832093 MS.gene065793:CDS
CATTGATGCAGTCCGTAAAG+AGG 0.559031 4.4:+32832813 MS.gene065793:CDS
TAATGCAGGCTCAAGAACTT+GGG 0.559518 4.4:+32832368 MS.gene065793:intron
CGAAGACAATTTGTTAGATG+GGG 0.565203 4.4:+32833599 MS.gene065793:CDS
GGGTCTTAATGCCCATTGGG+AGG 0.566029 4.4:+32832153 MS.gene065793:CDS
GGCTGCCGCAGCACATCAGG+AGG 0.566647 4.4:+32832834 MS.gene065793:CDS
GAGTCTCGGGAACCTTATAG+TGG 0.570097 4.4:+32832760 MS.gene065793:CDS
GAATTGTGGAAAGAGGTTGC+TGG 0.573145 4.4:+32832658 MS.gene065793:CDS
GGCAGCCACAGCACGCCAGG+AGG 0.574306 4.4:+32832876 MS.gene065793:CDS
AATGGTAAGGCCTCCCAGAA+CGG 0.574382 4.4:+32832604 MS.gene065793:CDS
GACGATGACGATTTGCCAGA+TGG 0.574633 4.4:+32833744 MS.gene065793:CDS
TGATGAGGATTCACTAGATG+AGG 0.576767 4.4:+32833314 MS.gene065793:CDS
ATCAAAACCAAACTCAACTA+CGG 0.579654 4.4:-32833938 None:intergenic
GGTACAAACACAAAATGGTA+AGG 0.583099 4.4:+32832591 MS.gene065793:CDS
CCGCAAGGCTCATGTTGATG+TGG 0.585666 4.4:+32832255 MS.gene065793:CDS
AGCAGCCTCCTGATGTGCTG+CGG 0.589638 4.4:-32832839 None:intergenic
GAATCGGTGTCATCATAAAG+AGG 0.589843 4.4:-32833876 None:intergenic
TGAGACCCCAGAGGATGTAA+GGG 0.590171 4.4:+32831893 MS.gene065793:CDS
TCAAGAACTTGGGCGGTCTG+TGG 0.591187 4.4:+32832378 MS.gene065793:CDS
GGAGTTTATTAAGAAGGCCA+AGG 0.597232 4.4:+32831235 MS.gene065793:CDS
TTGTAGGTGGGCTCCTAGCG+CGG 0.605332 4.4:+32831806 MS.gene065793:intron
AACATGAGCCTTGCGGCCTG+TGG 0.606679 4.4:-32832248 None:intergenic
ACAATATCACGATCGTCTGA+AGG 0.608845 4.4:+32832567 MS.gene065793:CDS
AGTCCACACCACAGGCCGCA+AGG 0.611297 4.4:+32832240 MS.gene065793:CDS
GGGCGACGAAACTTGAATTG+TGG 0.613873 4.4:+32832644 MS.gene065793:CDS
ACATCCTCGCTACGATGATG+AGG 0.614505 4.4:+32833299 MS.gene065793:CDS
ATATTGGTGGAAGTTGTTTG+GGG 0.616097 4.4:+32831917 MS.gene065793:CDS
TGTTGATGTGGCACTTAGCA+TGG 0.616336 4.4:+32832267 MS.gene065793:CDS
ACATTATCACTATGATGATG+AGG 0.618914 4.4:+32833230 MS.gene065793:CDS
TTACATATGTTGTTTGAGAG+CGG 0.620785 4.4:-32832459 None:intergenic
GGTCTTAATGCCCATTGGGA+GGG 0.621508 4.4:+32832154 MS.gene065793:CDS
CAGATATGCTCTCAAAAGTG+AGG 0.622705 4.4:+32832086 MS.gene065793:CDS
ACCTCATTGGATATGTGAAG+AGG 0.624423 4.4:+32832123 MS.gene065793:CDS
TCCTCGTCATTATCATGGTG+AGG 0.625583 4.4:-32833513 None:intergenic
GATGATGACGATTTGCCAGA+CGG 0.628419 4.4:+32833453 MS.gene065793:CDS
GCCATCCAGTCACACTTCCA+GGG 0.630208 4.4:+32831852 MS.gene065793:CDS
TCCTCATCATTATCATAGTG+AGG 0.630997 4.4:-32833804 None:intergenic
TTGATATACCCATGATCACG+AGG 0.631630 4.4:-32832028 None:intergenic
TGATGAGGATTCGCTACATG+AGG 0.633190 4.4:+32833818 MS.gene065793:CDS
GCCTCTTCACATATCCAATG+AGG 0.635189 4.4:-32832124 None:intergenic
TGATCATGCTATGCATCTAG+AGG 0.639265 4.4:+32832789 MS.gene065793:CDS
TCCCCATCATTATCATAGTG+AGG 0.639323 4.4:-32833657 None:intergenic
AAGAATCATCAAGCTGAAAG+GGG 0.641028 4.4:+32833702 MS.gene065793:CDS
TCCAGCGATAGAAAGGACCC+TGG 0.641874 4.4:-32831869 None:intergenic
AAGCAACATCATGCTAAAAG+GGG 0.645171 4.4:+32833414 MS.gene065793:CDS
ACAACATTATCAGCATTTGG+AGG 0.645179 4.4:+32832912 MS.gene065793:CDS
AAGCATCATCAAGCTGAAAG+GGG 0.649585 4.4:+32833276 MS.gene065793:CDS
ACCCTGGAAGTGTGACTGGA+TGG 0.650411 4.4:-32831853 None:intergenic
TCCTCACTATGATAATGATG+AGG 0.654946 4.4:+32833803 MS.gene065793:CDS
CCACATCAACATGAGCCTTG+CGG 0.654991 4.4:-32832255 None:intergenic
CTCAACTACGGTAATGACGA+CGG 0.657330 4.4:-32833926 None:intergenic
ATATGTGAAGAGGCTTGGAA+GGG 0.657558 4.4:+32832133 MS.gene065793:CDS
TGCAGGCTCAAGAACTTGGG+CGG 0.659117 4.4:+32832371 MS.gene065793:intron
TTGTGGAAAGAGGTTGCTGG+TGG 0.660274 4.4:+32832661 MS.gene065793:CDS
AAGAATCATCAAGCTAAAAG+GGG 0.661347 4.4:+32833558 MS.gene065793:CDS
AAGAATCATCAAGCTAAAAG+GGG 0.661347 4.4:+32833849 MS.gene065793:CDS
TCGTCATCATCGTCATAGTG+AGG 0.664947 4.4:-32833441 None:intergenic
CTGGTGGAAAGAGTCGAGGT+CGG 0.666255 4.4:+32832677 MS.gene065793:CDS
TCTCAAAAGTGAGGAAGAAG+GGG 0.667382 4.4:+32832095 MS.gene065793:CDS
TGACGAGGATTCGCTACATG+AGG 0.668713 4.4:+32833527 MS.gene065793:CDS
AAGCAGCGTCAAGCTAAAAG+GGG 0.671751 4.4:+32833345 MS.gene065793:CDS
TTGTCTTCGTCATCATAGTG+AGG 0.672385 4.4:-32833585 None:intergenic
CGACGACGACTCTCTAGATG+AGG 0.674837 4.4:+32833383 MS.gene065793:CDS
TCCTCACTATGATAATGATG+GGG 0.674907 4.4:+32833656 MS.gene065793:CDS
GCGAAGTTACACCACGCCGG+AGG 0.675552 4.4:-32832729 None:intergenic
CTCCTGCATCCCGTTCTGGG+AGG 0.677042 4.4:-32832614 None:intergenic
CGGGATGCAGGAGATAGATG+GGG 0.677483 4.4:+32832624 MS.gene065793:CDS
GTTGCTGGTGGAAAGAGTCG+AGG 0.681260 4.4:+32832673 MS.gene065793:CDS
AATCGTAATTCGTGTAAAGG+CGG 0.682791 4.4:+32832214 MS.gene065793:CDS
TCATCGTCATCATCATAGTG+AGG 0.683389 4.4:-32833729 None:intergenic
GAATGGTCATCATCATAGCG+AGG 0.683926 4.4:-32833075 None:intergenic
ATATCACGATCGTCTGAAGG+AGG 0.686760 4.4:+32832570 MS.gene065793:CDS
TCCTCACCATGATAATGACG+AGG 0.694396 4.4:+32833512 MS.gene065793:CDS
GAATCCTCATCATCGTAGCG+AGG 0.696997 4.4:-32833303 None:intergenic
AGTGCGAGTCAAGCTCGCAG+GGG 0.697262 4.4:+32833048 MS.gene065793:CDS
TTTGCTTTAAACCTCCGGCG+TGG 0.698945 4.4:+32832718 MS.gene065793:CDS
TGATGACGATTTGCCAGACG+GGG 0.703928 4.4:+32833455 MS.gene065793:CDS
TGACACCGATTCACTAGACG+AGG 0.704444 4.4:+32833887 MS.gene065793:CDS
AGTGTGAGTCAAGCTCGCAG+GGG 0.725594 4.4:+32833000 MS.gene065793:CDS
ATATTCCCTTACATCCTCTG+GGG 0.728189 4.4:-32831898 None:intergenic
TGATGGGGATTCGTTACACG+AGG 0.732844 4.4:+32833671 MS.gene065793:CDS
TCAGCGAAGTTACACCACGC+CGG 0.737989 4.4:-32832732 None:intergenic
TCGCTGGAGTGAGACCCCAG+AGG 0.762521 4.4:+32831884 MS.gene065793:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATATAAAAAATATAA+GGG - chr4.4:32832493-32832512 None:intergenic 0.0%
!! TATATAATATAAAAAATATA+AGG - chr4.4:32832494-32832513 None:intergenic 0.0%
!!! GTTGTTTTTTAATTTAATGC+AGG + chr4.4:32832354-32832373 MS.gene065793:intron 20.0%
!!! TGATATTGTTTCTAGAAAAA+AGG - chr4.4:32832556-32832575 None:intergenic 20.0%
! AAACAACATATGTAAGTTGT+TGG + chr4.4:32832467-32832486 MS.gene065793:intron 25.0%
! AAAGAATCATCAAGCTAAAA+GGG + chr4.4:32833557-32833576 MS.gene065793:CDS 25.0%
! CTCTTGAACAAAATGATATT+AGG + chr4.4:32832522-32832541 MS.gene065793:intron 25.0%
! TAACTAGTTATCGTTATGTA+GGG - chr4.4:32831976-32831995 None:intergenic 25.0%
! TTGACTAGAGATCTTTATAA+AGG - chr4.4:32832185-32832204 None:intergenic 25.0%
! TTGAGCAAAATATTTGTCTA+GGG + chr4.4:32831408-32831427 MS.gene065793:intron 25.0%
!!! ACTAGTTAGATTCCTTTTTT+AGG + chr4.4:32831988-32832007 MS.gene065793:intron 25.0%
!!! ATTTAGTTTGGACTTTTTGT+AGG + chr4.4:32831790-32831809 MS.gene065793:intron 25.0%
AAAAAGACGTTTCAAACAAG+AGG + chr4.4:32832049-32832068 MS.gene065793:CDS 30.0%
AAAACTCATTTGTACAAGAG+TGG + chr4.4:32831344-32831363 MS.gene065793:intron 30.0%
AAACTCATTTGTACAAGAGT+GGG + chr4.4:32831345-32831364 MS.gene065793:intron 30.0%
AAAGAATCATCAAGCTGAAA+GGG + chr4.4:32833701-32833720 MS.gene065793:CDS 30.0%
AAAGCAACATCATGCTAAAA+GGG + chr4.4:32833413-32833432 MS.gene065793:CDS 30.0%
AACTAGTTATCGTTATGTAG+GGG - chr4.4:32831975-32831994 None:intergenic 30.0%
AAGAATCATCAAGCTAAAAG+GGG + chr4.4:32833558-32833577 MS.gene065793:CDS 30.0%
AAGCAATCTTGTCCTAAAAA+AGG - chr4.4:32832003-32832022 None:intergenic 30.0%
AATATTGGTGGAAGTTGTTT+GGG + chr4.4:32831916-32831935 MS.gene065793:CDS 30.0%
AGTTCAGGAGTTTATTAAGA+AGG + chr4.4:32831229-32831248 MS.gene065793:CDS 30.0%
CAAAGAATCATCAAGCTAAA+AGG + chr4.4:32833556-32833575 MS.gene065793:CDS 30.0%
CTAACTAGTTATCGTTATGT+AGG - chr4.4:32831977-32831996 None:intergenic 30.0%
CTTGAGCAAAATATTTGTCT+AGG + chr4.4:32831407-32831426 MS.gene065793:intron 30.0%
GAAACAACATTATCAGCATT+TGG + chr4.4:32832909-32832928 MS.gene065793:CDS 30.0%
TGGGTTTCAACTAAACTATA+TGG + chr4.4:32831364-32831383 MS.gene065793:intron 30.0%
TTCAACTAAACTATATGGTC+TGG + chr4.4:32831369-32831388 MS.gene065793:intron 30.0%
! ACATTATCACTATGATGATG+AGG + chr4.4:32833230-32833249 MS.gene065793:CDS 30.0%
! ATCCTCACTATGATAATGAT+GGG + chr4.4:32833655-32833674 MS.gene065793:CDS 30.0%
! TTACATATGTTGTTTGAGAG+CGG - chr4.4:32832462-32832481 None:intergenic 30.0%
! TTGATGGTTGACATTTAGTT+TGG + chr4.4:32831778-32831797 MS.gene065793:intron 30.0%
!! ACGAAGACAATTTGTTAGAT+GGG + chr4.4:32833598-32833617 MS.gene065793:CDS 30.0%
!!! CTTTTAGCTTGATGATTCTT+TGG - chr4.4:32833558-32833577 None:intergenic 30.0%
!!! TTTTTAGGACAAGATTGCTT+GGG + chr4.4:32832003-32832022 MS.gene065793:intron 30.0%
!!! TTTTTTAGGACAAGATTGCT+TGG + chr4.4:32832002-32832021 MS.gene065793:intron 30.0%
AAAGTCTTTAACTCCAAGAG+AGG + chr4.4:32831319-32831338 MS.gene065793:intron 35.0%
AAGAATCATCAAGCTGAAAG+GGG + chr4.4:32833702-32833721 MS.gene065793:CDS 35.0%
AAGCAACATCATGCTAAAAG+GGG + chr4.4:32833414-32833433 MS.gene065793:CDS 35.0%
AATATTCCCTTACATCCTCT+GGG - chr4.4:32831902-32831921 None:intergenic 35.0%
AATCGTAATTCGTGTAAAGG+CGG + chr4.4:32832214-32832233 MS.gene065793:CDS 35.0%
ACAACATTATCAGCATTTGG+AGG + chr4.4:32832912-32832931 MS.gene065793:CDS 35.0%
ACCAATCGTAATTCGTGTAA+AGG + chr4.4:32832211-32832230 MS.gene065793:CDS 35.0%
ATAAAAGGAAGTCTGGCAAT+TGG + chr4.4:32832428-32832447 MS.gene065793:CDS 35.0%
ATATTGGTGGAAGTTGTTTG+GGG + chr4.4:32831917-32831936 MS.gene065793:CDS 35.0%
ATCGAATAGCAGTAGACATA+TGG + chr4.4:32831436-32831455 MS.gene065793:intron 35.0%
CAAAGAATCATCAAGCTGAA+AGG + chr4.4:32833700-32833719 MS.gene065793:CDS 35.0%
CAAAGCAACATCATGCTAAA+AGG + chr4.4:32833412-32833431 MS.gene065793:CDS 35.0%
CTAGATGTTTCTTTCTTCGA+CGG - chr4.4:32833122-32833141 None:intergenic 35.0%
GAAACTTGAATTGTGGAAAG+AGG + chr4.4:32832651-32832670 MS.gene065793:CDS 35.0%
GAATATTGGTGGAAGTTGTT+TGG + chr4.4:32831915-32831934 MS.gene065793:CDS 35.0%
GGTACAAACACAAAATGGTA+AGG + chr4.4:32832591-32832610 MS.gene065793:CDS 35.0%
TAAAAGGAAGTCTGGCAATT+GGG + chr4.4:32832429-32832448 MS.gene065793:CDS 35.0%
TCCTCATCATTATCATAGTG+AGG - chr4.4:32833807-32833826 None:intergenic 35.0%
TTTCTCTCAGACAAAAAGCA+GGG - chr4.4:32831266-32831285 None:intergenic 35.0%
! AAAGCATCATCAAGCTGAAA+GGG + chr4.4:32833275-32833294 MS.gene065793:CDS 35.0%
! AAATGAGTTTTCACCTCTCT+TGG - chr4.4:32831335-32831354 None:intergenic 35.0%
! AAGGAGGTACAAACACAAAA+TGG + chr4.4:32832586-32832605 MS.gene065793:CDS 35.0%
! AATTGCCAGACTTCCTTTTA+TGG - chr4.4:32832429-32832448 None:intergenic 35.0%
! AGTTTGGACTTTTTGTAGGT+GGG + chr4.4:32831794-32831813 MS.gene065793:intron 35.0%
! ATTGCCAGACTTCCTTTTAT+GGG - chr4.4:32832428-32832447 None:intergenic 35.0%
! CATCCTCACTATGATAATGA+TGG + chr4.4:32833654-32833673 MS.gene065793:CDS 35.0%
! CTTTCAGCTTGATGATTCTT+TGG - chr4.4:32833702-32833721 None:intergenic 35.0%
! TAGTTTGGACTTTTTGTAGG+TGG + chr4.4:32831793-32831812 MS.gene065793:intron 35.0%
! TCCTCACTATGATAATGATG+AGG + chr4.4:32833656-32833675 MS.gene065793:CDS 35.0%
! TCCTCACTATGATAATGATG+GGG + chr4.4:32833656-32833675 MS.gene065793:CDS 35.0%
! TCTTGTGAGCTTGATGTTTT+TGG - chr4.4:32833209-32833228 None:intergenic 35.0%
!! CGAAGACAATTTGTTAGATG+GGG + chr4.4:32833599-32833618 MS.gene065793:CDS 35.0%
!! CTTTTAGCATGATGTTGCTT+TGG - chr4.4:32833414-32833433 None:intergenic 35.0%
!! CTTTTGAGAGCATATCTGAA+AGG - chr4.4:32832084-32832103 None:intergenic 35.0%
!! GAAAGAAACATCTAGCTCTA+AGG + chr4.4:32833127-32833146 MS.gene065793:CDS 35.0%
!! GACGAAGACAATTTGTTAGA+TGG + chr4.4:32833597-32833616 MS.gene065793:CDS 35.0%
!! TCTGAAACTTGGAGAGTTTT+GGG - chr4.4:32831614-32831633 None:intergenic 35.0%
!! TCTTTTTAGCCACCCATAAA+AGG + chr4.4:32832413-32832432 MS.gene065793:CDS 35.0%
!!! TTTTTAGCTTGACGTTGCTT+TGG - chr4.4:32833777-32833796 None:intergenic 35.0%
!!! TTTTTAGCTTGAGGTTGCTT+TGG - chr4.4:32833630-32833649 None:intergenic 35.0%
!!! TTTTTAGCTTGTCGTTGCTT+TGG - chr4.4:32833486-32833505 None:intergenic 35.0%
AAAGCAGCGTCAAGCTAAAA+GGG + chr4.4:32833344-32833363 MS.gene065793:CDS 40.0%
AAGCATCATCAAGCTGAAAG+GGG + chr4.4:32833276-32833295 MS.gene065793:CDS 40.0%
ACAATATCACGATCGTCTGA+AGG + chr4.4:32832567-32832586 MS.gene065793:CDS 40.0%
ACCTCATTGGATATGTGAAG+AGG + chr4.4:32832123-32832142 MS.gene065793:CDS 40.0%
AGCAACGACAAGCTAAAAAG+CGG + chr4.4:32833487-32833506 MS.gene065793:CDS 40.0%
AGGATGTAAGGGAATATTGG+TGG + chr4.4:32831904-32831923 MS.gene065793:CDS 40.0%
ATAACTTACCCTAGACCACA+GGG - chr4.4:32831671-32831690 None:intergenic 40.0%
ATATGTGAAGAGGCTTGGAA+GGG + chr4.4:32832133-32832152 MS.gene065793:CDS 40.0%
ATATTCCCTTACATCCTCTG+GGG - chr4.4:32831901-32831920 None:intergenic 40.0%
ATTGGATATGTGAAGAGGCT+TGG + chr4.4:32832128-32832147 MS.gene065793:CDS 40.0%
CAATATTCCCTTACATCCTC+TGG - chr4.4:32831903-32831922 None:intergenic 40.0%
CAGAGGATGTAAGGGAATAT+TGG + chr4.4:32831901-32831920 MS.gene065793:CDS 40.0%
CAGATATGCTCTCAAAAGTG+AGG + chr4.4:32832086-32832105 MS.gene065793:CDS 40.0%
CTAAGAACTCGTCTAGTGAA+TGG - chr4.4:32833095-32833114 None:intergenic 40.0%
CTCTCAAAAGTGAGGAAGAA+GGG + chr4.4:32832094-32832113 MS.gene065793:CDS 40.0%
CTGATGGGAAGGTTCTTATA+CGG + chr4.4:32831645-32831664 MS.gene065793:intron 40.0%
CTTTCTCTCAGACAAAAAGC+AGG - chr4.4:32831267-32831286 None:intergenic 40.0%
GAATAGCAGTAGACATATGG+AGG + chr4.4:32831439-32831458 MS.gene065793:intron 40.0%
GCCTTTACACGAATTACGAT+TGG - chr4.4:32832215-32832234 None:intergenic 40.0%
GGAGTTTATTAAGAAGGCCA+AGG + chr4.4:32831235-32831254 MS.gene065793:CDS 40.0%
TAAGACCTCGTCTAGTGAAT+CGG - chr4.4:32833895-32833914 None:intergenic 40.0%
TAATGCAGGCTCAAGAACTT+GGG + chr4.4:32832368-32832387 MS.gene065793:intron 40.0%
TATAACTTACCCTAGACCAC+AGG - chr4.4:32831672-32831691 None:intergenic 40.0%
TCATACAGAGGATTCAGAAG+AGG + chr4.4:32831580-32831599 MS.gene065793:intron 40.0%
TCATATGGAGGAATCAGAAG+AGG + chr4.4:32831520-32831539 MS.gene065793:intron 40.0%
TCATCGTCATCATCATAGTG+AGG - chr4.4:32833732-32833751 None:intergenic 40.0%
TCCCCATCATTATCATAGTG+AGG - chr4.4:32833660-32833679 None:intergenic 40.0%
TCCTCCATATGAGGAACTTT+GGG - chr4.4:32831512-32831531 None:intergenic 40.0%
TCTCAAAAGTGAGGAAGAAG+GGG + chr4.4:32832095-32832114 MS.gene065793:CDS 40.0%
TCTTCTGAATCCTCTGTATG+AGG - chr4.4:32831581-32831600 None:intergenic 40.0%
TCTTCTGATTCCTCCATATG+AGG - chr4.4:32831521-32831540 None:intergenic 40.0%
TGATCATGCTATGCATCTAG+AGG + chr4.4:32832789-32832808 MS.gene065793:CDS 40.0%
TGATGAGGATTCACTAGATG+AGG + chr4.4:32833314-32833333 MS.gene065793:CDS 40.0%
TTAATGCAGGCTCAAGAACT+TGG + chr4.4:32832367-32832386 MS.gene065793:intron 40.0%
TTCCTCCATATGAGGAACTT+TGG - chr4.4:32831513-32831532 None:intergenic 40.0%
TTGATATACCCATGATCACG+AGG - chr4.4:32832031-32832050 None:intergenic 40.0%
TTGTCTTCGTCATCATAGTG+AGG - chr4.4:32833588-32833607 None:intergenic 40.0%
! ACCTCCATATGTGGAGTTTT+GGG - chr4.4:32831473-32831492 None:intergenic 40.0%
! ATCCTCTGTATGAGGAGTTT+TGG - chr4.4:32831573-32831592 None:intergenic 40.0%
! CAAAGCATCATCAAGCTGAA+AGG + chr4.4:32833274-32833293 MS.gene065793:CDS 40.0%
! CAGACTTTGCTTTAAACCTC+CGG + chr4.4:32832713-32832732 MS.gene065793:CDS 40.0%
! CATTCTGCTTGTCTGAAACT+TGG - chr4.4:32831625-32831644 None:intergenic 40.0%
! TCCTCTGTATGAGGAGTTTT+GGG - chr4.4:32831572-32831591 None:intergenic 40.0%
!! CTTTCAGCTTGATGATGCTT+TGG - chr4.4:32833276-32833295 None:intergenic 40.0%
!! GAATCGGTGTCATCATAAAG+AGG - chr4.4:32833879-32833898 None:intergenic 40.0%
!! GTCTGAAACTTGGAGAGTTT+TGG - chr4.4:32831615-32831634 None:intergenic 40.0%
!! TGAGTTTGTTAGTGGAGTTC+AGG + chr4.4:32831214-32831233 MS.gene065793:CDS 40.0%
AAGCAGCGTCAAGCTAAAAG+GGG + chr4.4:32833345-32833364 MS.gene065793:CDS 45.0%
ACACACTTGCACATTGCACA+TGG - chr4.4:32831299-32831318 None:intergenic 45.0%
ACGATGACGATTTGCCAGAT+GGG + chr4.4:32833745-32833764 MS.gene065793:CDS 45.0%
ATATCACGATCGTCTGAAGG+AGG + chr4.4:32832570-32832589 MS.gene065793:CDS 45.0%
CAAAAAGCAGGGTTGTTCCT+TGG - chr4.4:32831255-32831274 None:intergenic 45.0%
CAAAGCAGCGTCAAGCTAAA+AGG + chr4.4:32833343-32833362 MS.gene065793:CDS 45.0%
CAGACAAGCAGAATGCTGAT+GGG + chr4.4:32831630-32831649 MS.gene065793:intron 45.0%
CATTGATGCAGTCCGTAAAG+AGG + chr4.4:32832813-32832832 MS.gene065793:CDS 45.0%
GAAGGGTCTTAATGCCCATT+GGG + chr4.4:32832150-32832169 MS.gene065793:CDS 45.0%
GAATGGTCATCATCATAGCG+AGG - chr4.4:32833078-32833097 None:intergenic 45.0%
GAATTGTGGAAAGAGGTTGC+TGG + chr4.4:32832658-32832677 MS.gene065793:CDS 45.0%
GATATGTGAAGAGGCTTGGA+AGG + chr4.4:32832132-32832151 MS.gene065793:CDS 45.0%
GCCTCTTCACATATCCAATG+AGG - chr4.4:32832127-32832146 None:intergenic 45.0%
GCGAATCCTCGTCATTATCA+TGG - chr4.4:32833521-32833540 None:intergenic 45.0%
GCTCTCAAAAGTGAGGAAGA+AGG + chr4.4:32832093-32832112 MS.gene065793:CDS 45.0%
GGATCCCAAAACTCCACATA+TGG + chr4.4:32831466-32831485 MS.gene065793:intron 45.0%
GGATCCCAAAGTTCCTCATA+TGG + chr4.4:32831505-32831524 MS.gene065793:intron 45.0%
GGTGGCTAAAAAGAGCTCAT+CGG - chr4.4:32832407-32832426 None:intergenic 45.0%
GTGGCTAAAAAGAGCTCATC+GGG - chr4.4:32832406-32832425 None:intergenic 45.0%
TACAGAGGATTCAGAAGAGG+AGG + chr4.4:32831583-32831602 MS.gene065793:intron 45.0%
TAGCAGTAGACATATGGAGG+AGG + chr4.4:32831442-32831461 MS.gene065793:intron 45.0%
TATATGGTCTGGACTGAGCA+TGG + chr4.4:32831380-32831399 MS.gene065793:intron 45.0%
TATGGAGGAATCAGAAGAGG+AGG + chr4.4:32831523-32831542 MS.gene065793:intron 45.0%
TCAGACAAGCAGAATGCTGA+TGG + chr4.4:32831629-32831648 MS.gene065793:intron 45.0%
TCCCAAAACTCCACATATGG+AGG + chr4.4:32831469-32831488 MS.gene065793:intron 45.0%
TCCCAAAACTCCTCATACAG+AGG + chr4.4:32831568-32831587 MS.gene065793:intron 45.0%
TCCCAAAGTTCCTCATATGG+AGG + chr4.4:32831508-32831527 MS.gene065793:intron 45.0%
TCCTCGTCATTATCATGGTG+AGG - chr4.4:32833516-32833535 None:intergenic 45.0%
TCGTCATCATCGTCATAGTG+AGG - chr4.4:32833444-32833463 None:intergenic 45.0%
TGATCACACCCACCACTATA+AGG - chr4.4:32832775-32832794 None:intergenic 45.0%
TGATGAGGATTCGCTACATG+AGG + chr4.4:32833818-32833837 MS.gene065793:CDS 45.0%
TGCTTTGGTAAAACCCCATC+TGG - chr4.4:32833615-32833634 None:intergenic 45.0%
TGTGTGTGTGTGTGTGTTGA+TGG + chr4.4:32831762-32831781 MS.gene065793:intron 45.0%
TGTTGATGTGGCACTTAGCA+TGG + chr4.4:32832267-32832286 MS.gene065793:CDS 45.0%
! ATGATGACGATTTGCCAGAC+GGG + chr4.4:32833454-32833473 MS.gene065793:CDS 45.0%
! CACCTCCATATGTGGAGTTT+TGG - chr4.4:32831474-32831493 None:intergenic 45.0%
! CTATGATGATGAGGATTCGC+TGG + chr4.4:32833239-32833258 MS.gene065793:CDS 45.0%
! CTCTTTACGGACTGCATCAA+TGG - chr4.4:32832815-32832834 None:intergenic 45.0%
! GATGATGACGATTTGCCAGA+CGG + chr4.4:32833453-32833472 MS.gene065793:CDS 45.0%
! TCCTCACCATGATAATGACG+AGG + chr4.4:32833512-32833531 MS.gene065793:CDS 45.0%
!! TTGTGAAAGCACCTGCTGAT+TGG - chr4.4:32832981-32833000 None:intergenic 45.0%
!!! CTTTTAGCTTGACGCTGCTT+TGG - chr4.4:32833345-32833364 None:intergenic 45.0%
!!! GAGCTTGATGTTTTTGGCGA+CGG - chr4.4:32833203-32833222 None:intergenic 45.0%
!!! GATGTTTTTGGCGACGGTTT+GGG - chr4.4:32833197-32833216 None:intergenic 45.0%
!!! GGATGTCGCTTTTTAGCTTG+AGG - chr4.4:32833639-32833658 None:intergenic 45.0%
!!! TGATGTTTTTGGCGACGGTT+TGG - chr4.4:32833198-32833217 None:intergenic 45.0%
AAAGGCTTCACCCTCCCAAT+GGG - chr4.4:32832167-32832186 None:intergenic 50.0%
AACGGGATGCAGGAGATAGA+TGG + chr4.4:32832622-32832641 MS.gene065793:CDS 50.0%
AAGGTTCTTATACGGCCCTG+TGG + chr4.4:32831653-32831672 MS.gene065793:intron 50.0%
AAGTGTGAGTCAAGCTCGCA+GGG + chr4.4:32832999-32833018 MS.gene065793:CDS 50.0%
AATGGTAAGGCCTCCCAGAA+CGG + chr4.4:32832604-32832623 MS.gene065793:CDS 50.0%
ACATCCTCGCTACGATGATG+AGG + chr4.4:32833299-32833318 MS.gene065793:CDS 50.0%
ACGGGATGCAGGAGATAGAT+GGG + chr4.4:32832623-32832642 MS.gene065793:CDS 50.0%
AGAGGAGGAGGAATCAGAAG+AGG + chr4.4:32831538-32831557 MS.gene065793:intron 50.0%
AGAGGATTCAGAAGAGGAGG+AGG + chr4.4:32831586-32831605 MS.gene065793:intron 50.0%
CAAGCAGAATGCTGATGGGA+AGG + chr4.4:32831634-32831653 MS.gene065793:intron 50.0%
CAGTAGACATATGGAGGAGG+AGG + chr4.4:32831445-32831464 MS.gene065793:intron 50.0%
CCACATCAACATGAGCCTTG+CGG - chr4.4:32832258-32832277 None:intergenic 50.0%
CGATGACGATTTGCCAGATG+GGG + chr4.4:32833746-32833765 MS.gene065793:CDS 50.0%
CTCGGGAACCTTATAGTGGT+GGG + chr4.4:32832764-32832783 MS.gene065793:CDS 50.0%
CTTGGGATCCTCGTGATCAT+GGG + chr4.4:32832020-32832039 MS.gene065793:CDS 50.0%
GAATCCTCATCATCGTAGCG+AGG - chr4.4:32833306-32833325 None:intergenic 50.0%
GACGATGACGATTTGCCAGA+TGG + chr4.4:32833744-32833763 MS.gene065793:CDS 50.0%
GAGTCTCGGGAACCTTATAG+TGG + chr4.4:32832760-32832779 MS.gene065793:CDS 50.0%
GCCACCCATAAAAGGAAGTC+TGG + chr4.4:32832421-32832440 MS.gene065793:CDS 50.0%
GGAAGGGTCTTAATGCCCAT+TGG + chr4.4:32832149-32832168 MS.gene065793:CDS 50.0%
GGGCGACGAAACTTGAATTG+TGG + chr4.4:32832644-32832663 MS.gene065793:CDS 50.0%
GGTCTTAATGCCCATTGGGA+GGG + chr4.4:32832154-32832173 MS.gene065793:CDS 50.0%
GTCTCACTCCAGCGATAGAA+AGG - chr4.4:32831879-32831898 None:intergenic 50.0%
TAAAGGCTTCACCCTCCCAA+TGG - chr4.4:32832168-32832187 None:intergenic 50.0%
TATCTCCTGCATCCCGTTCT+GGG - chr4.4:32832620-32832639 None:intergenic 50.0%
TCTCGGGAACCTTATAGTGG+TGG + chr4.4:32832763-32832782 MS.gene065793:CDS 50.0%
TCTTCCTGCACCTCCATATG+TGG - chr4.4:32831482-32831501 None:intergenic 50.0%
TGACGAGGATTCGCTACATG+AGG + chr4.4:32833527-32833546 MS.gene065793:CDS 50.0%
TGAGACCCCAGAGGATGTAA+GGG + chr4.4:32831893-32831912 MS.gene065793:CDS 50.0%
TGATGGGGATTCGTTACACG+AGG + chr4.4:32833671-32833690 MS.gene065793:CDS 50.0%
TTATACGGCCCTGTGGTCTA+GGG + chr4.4:32831660-32831679 MS.gene065793:intron 50.0%
TTGTGGAAAGAGGTTGCTGG+TGG + chr4.4:32832661-32832680 MS.gene065793:CDS 50.0%
! AACTCCACATATGGAGGTGC+AGG + chr4.4:32831475-32831494 MS.gene065793:intron 50.0%
! ACATATGGAGGTGCAGGAAG+AGG + chr4.4:32831481-32831500 MS.gene065793:intron 50.0%
! GCCAGACTTCCTTTTATGGG+TGG - chr4.4:32832425-32832444 None:intergenic 50.0%
! TGATGACGATTTGCCAGACG+GGG + chr4.4:32833455-32833474 MS.gene065793:CDS 50.0%
! TTTGCTTTAAACCTCCGGCG+TGG + chr4.4:32832718-32832737 MS.gene065793:CDS 50.0%
!! AAGAGTCGAGGTCGGTGTTA+TGG + chr4.4:32832685-32832704 MS.gene065793:CDS 50.0%
!! TGACACCGATTCACTAGACG+AGG + chr4.4:32833887-32833906 MS.gene065793:CDS 50.0%
!! TGGTGTAACTTCGCTGACTC+AGG + chr4.4:32832738-32832757 MS.gene065793:CDS 50.0%
AAGTGCGAGTCAAGCTCGCA+GGG + chr4.4:32833047-32833066 MS.gene065793:CDS 55.0%
AGAAGGGGACGAGACCTCAT+TGG + chr4.4:32832110-32832129 MS.gene065793:CDS 55.0%
AGTGTGAGTCAAGCTCGCAG+GGG + chr4.4:32833000-32833019 MS.gene065793:CDS 55.0%
ATGGTAAGGCCTCCCAGAAC+GGG + chr4.4:32832605-32832624 MS.gene065793:CDS 55.0%
CAAGTGTGAGTCAAGCTCGC+AGG + chr4.4:32832998-32833017 MS.gene065793:CDS 55.0%
CCGCAAGGCTCATGTTGATG+TGG + chr4.4:32832255-32832274 MS.gene065793:CDS 55.0%
CGACGACGACTCTCTAGATG+AGG + chr4.4:32833383-32833402 MS.gene065793:CDS 55.0%
CGGGATGCAGGAGATAGATG+GGG + chr4.4:32832624-32832643 MS.gene065793:CDS 55.0%
CTATCTCCTGCATCCCGTTC+TGG - chr4.4:32832621-32832640 None:intergenic 55.0%
CTGGTGGAAAGAGTCGAGGT+CGG + chr4.4:32832677-32832696 MS.gene065793:CDS 55.0%
CTTATACGGCCCTGTGGTCT+AGG + chr4.4:32831659-32831678 MS.gene065793:intron 55.0%
GCCATCCAGTCACACTTCCA+GGG + chr4.4:32831852-32831871 MS.gene065793:CDS 55.0%
GCGTGTTTAATCGCAGCAGC+AGG - chr4.4:32831834-32831853 None:intergenic 55.0%
GCTTGGGATCCTCGTGATCA+TGG + chr4.4:32832019-32832038 MS.gene065793:CDS 55.0%
GGAGGAATCAGAAGAGGAGG+AGG + chr4.4:32831526-32831545 MS.gene065793:intron 55.0%
GGAGGAGGAATCAGAAGAGG+AGG + chr4.4:32831541-32831560 MS.gene065793:intron 55.0%
GGGTCTTAATGCCCATTGGG+AGG + chr4.4:32832153-32832172 MS.gene065793:CDS 55.0%
GTGAGACCCCAGAGGATGTA+AGG + chr4.4:32831892-32831911 MS.gene065793:CDS 55.0%
GTTGCTGGTGGAAAGAGTCG+AGG + chr4.4:32832673-32832692 MS.gene065793:CDS 55.0%
TACGGTAATGACGACGGCGA+CGG - chr4.4:32833923-32833942 None:intergenic 55.0%
TCAAGAACTTGGGCGGTCTG+TGG + chr4.4:32832378-32832397 MS.gene065793:CDS 55.0%
TCAGCGAAGTTACACCACGC+CGG - chr4.4:32832735-32832754 None:intergenic 55.0%
TCCAGCGATAGAAAGGACCC+TGG - chr4.4:32831872-32831891 None:intergenic 55.0%
TCCAGGGTCCTTTCTATCGC+TGG + chr4.4:32831868-32831887 MS.gene065793:CDS 55.0%
TGCAGGCTCAAGAACTTGGG+CGG + chr4.4:32832371-32832390 MS.gene065793:intron 55.0%
TGCTTTGGTAAGACCCCGTC+TGG - chr4.4:32833471-32833490 None:intergenic 55.0%
! AAGGACCCTGGAAGTGTGAC+TGG - chr4.4:32831860-32831879 None:intergenic 55.0%
! ACCCTGGAAGTGTGACTGGA+TGG - chr4.4:32831856-32831875 None:intergenic 55.0%
! TATGGAGGTGCAGGAAGAGG+AGG + chr4.4:32831484-32831503 MS.gene065793:intron 55.0%
!! CTTCGCTGACTCAGGAGTCT+CGG + chr4.4:32832746-32832765 MS.gene065793:CDS 55.0%
!! TTCGCTGACTCAGGAGTCTC+GGG + chr4.4:32832747-32832766 MS.gene065793:CDS 55.0%
AACATGAGCCTTGCGGCCTG+TGG - chr4.4:32832251-32832270 None:intergenic 60.0%
ACGGTAATGACGACGGCGAC+GGG - chr4.4:32833922-32833941 None:intergenic 60.0%
AGCAGCCTCCTGATGTGCTG+CGG - chr4.4:32832842-32832861 None:intergenic 60.0%
AGTGCGAGTCAAGCTCGCAG+GGG + chr4.4:32833048-32833067 MS.gene065793:CDS 60.0%
CAAGTGCGAGTCAAGCTCGC+AGG + chr4.4:32833046-32833065 MS.gene065793:CDS 60.0%
CGCCATCCAGTCACACTTCC+AGG + chr4.4:32831851-32831870 MS.gene065793:CDS 60.0%
GTGCTGCGGCAGCCTCTTTA+CGG - chr4.4:32832828-32832847 None:intergenic 60.0%
GTTTCGACTCAGCTGCCTCC+TGG - chr4.4:32832894-32832913 None:intergenic 60.0%
! TTGTAGGTGGGCTCCTAGCG+CGG + chr4.4:32831806-32831825 MS.gene065793:intron 60.0%
!! GCTCTAGAGCGCCAATCAGC+AGG + chr4.4:32832967-32832986 MS.gene065793:CDS 60.0%
AGAGGCTGCCGCAGCACATC+AGG + chr4.4:32832831-32832850 MS.gene065793:CDS 65.0%
AGTCCACACCACAGGCCGCA+AGG + chr4.4:32832240-32832259 MS.gene065793:CDS 65.0%
GCGAAGTTACACCACGCCGG+AGG - chr4.4:32832732-32832751 None:intergenic 65.0%
TAATGACGACGGCGACGGGC+TGG - chr4.4:32833918-32833937 None:intergenic 65.0%
TCGCTGGAGTGAGACCCCAG+AGG + chr4.4:32831884-32831903 MS.gene065793:CDS 65.0%
! CTCCTGCATCCCGTTCTGGG+AGG - chr4.4:32832617-32832636 None:intergenic 65.0%
AGCTGCCTCCTGGCGTGCTG+TGG - chr4.4:32832884-32832903 None:intergenic 70.0%
CGCAGGGGACGCCAATCAGC+AGG + chr4.4:32833015-32833034 MS.gene065793:CDS 70.0%
GAGCCTTGCGGCCTGTGGTG+TGG - chr4.4:32832246-32832265 None:intergenic 70.0%
GGAGGCTGCTGCAGCACGTC+AGG + chr4.4:32832852-32832871 MS.gene065793:CDS 70.0%
GGCCTCCCAGAACGGGATGC+AGG + chr4.4:32832612-32832631 MS.gene065793:CDS 70.0%
GGCGGAGCAGTCCACACCAC+AGG + chr4.4:32832232-32832251 MS.gene065793:CDS 70.0%
GGCTGCCGCAGCACATCAGG+AGG + chr4.4:32832834-32832853 MS.gene065793:CDS 70.0%
GGCTGCTGCAGCACGTCAGG+AGG + chr4.4:32832855-32832874 MS.gene065793:CDS 70.0%
GGAGGCAGCCACAGCACGCC+AGG + chr4.4:32832873-32832892 MS.gene065793:CDS 75.0%
GGCAGCCACAGCACGCCAGG+AGG + chr4.4:32832876-32832895 MS.gene065793:CDS 75.0%
!! GCAGCAGCAGGCGCCGCGCT+AGG - chr4.4:32831822-32831841 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 32831213 32833947 32831213 ID=MS.gene065793
chr4.4 mRNA 32831213 32833947 32831213 ID=MS.gene065793.t1;Parent=MS.gene065793
chr4.4 exon 32831213 32831316 32831213 ID=MS.gene065793.t1.exon1;Parent=MS.gene065793.t1
chr4.4 CDS 32831213 32831316 32831213 ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1
chr4.4 exon 32831812 32831938 32831812 ID=MS.gene065793.t1.exon2;Parent=MS.gene065793.t1
chr4.4 CDS 32831812 32831938 32831812 ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1
chr4.4 exon 32832010 32832288 32832010 ID=MS.gene065793.t1.exon3;Parent=MS.gene065793.t1
chr4.4 CDS 32832010 32832288 32832010 ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1
chr4.4 exon 32832376 32832477 32832376 ID=MS.gene065793.t1.exon4;Parent=MS.gene065793.t1
chr4.4 CDS 32832376 32832477 32832376 ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1
chr4.4 exon 32832565 32833947 32832565 ID=MS.gene065793.t1.exon5;Parent=MS.gene065793.t1
chr4.4 CDS 32832565 32833947 32832565 ID=cds.MS.gene065793.t1;Parent=MS.gene065793.t1
Gene Sequence

>MS.gene065793

ATGAGTTTGTTAGTGGAGTTCAGGAGTTTATTAAGAAGGCCAAGGAACAACCCTGCTTTTTGTCTGAGAGAAAGATCAAGTGTCCATGTGCAATGTGCAAGTGTGTAAAGTCTTTAACTCCAAGAGAGGTGAAAACTCATTTGTACAAGAGTGGGTTTCAACTAAACTATATGGTCTGGACTGAGCATGGAGAACTTGAGCAAAATATTTGTCTAGGGAGTCAATCGAATAGCAGTAGACATATGGAGGAGGAGGATCCCAAAACTCCACATATGGAGGTGCAGGAAGAGGAGGATCCCAAAGTTCCTCATATGGAGGAATCAGAAGAGGAGGAGGAATCAGAAGAGGAGGAGGATCCCAAAACTCCTCATACAGAGGATTCAGAAGAGGAGGAGGATCCCAAAACTCTCCAAGTTTCAGACAAGCAGAATGCTGATGGGAAGGTTCTTATACGGCCCTGTGGTCTAGGGTAAGTTATAATATTGTTTGTTTTGTTCTTTAAGCACTTTTTTGTTTTTTTGTGCGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTTGATGGTTGACATTTAGTTTGGACTTTTTGTAGGTGGGCTCCTAGCGCGGCGCCTGCTGCTGCGATTAAACACGCCATCCAGTCACACTTCCAGGGTCCTTTCTATCGCTGGAGTGAGACCCCAGAGGATGTAAGGGAATATTGGTGGAAGTTGTTTGGGGTAAGTTGTGTTTATTTAATTACTATGTAATTGCCCCTACATAACGATAACTAGTTAGATTCCTTTTTTAGGACAAGATTGCTTGGGATCCTCGTGATCATGGGTATATCAAAAAGACGTTTCAAACAAGAGGCGCAAAACGCCTTTCAGATATGCTCTCAAAAGTGAGGAAGAAGGGGACGAGACCTCATTGGATATGTGAAGAGGCTTGGAAGGGTCTTAATGCCCATTGGGAGGGTGAAGCCTTTATAAAGATCTCTAGTCAAAATAAGACCAATCGTAATTCGTGTAAAGGCGGAGCAGTCCACACCACAGGCCGCAAGGCTCATGTTGATGTGGCACTTAGCATGGTATGCATTTAAATCACACTTATTGTCTTGTTCATTATCTTAGAATGTGTAATATTTATTAATGTGTTGTTTTTTAATTTAATGCAGGCTCAAGAACTTGGGCGGTCTGTGGATCCCGATGAGCTCTTTTTAGCCACCCATAAAAGGAAGTCTGGCAATTGGGTTGATGACCGCTCTCAAACAACATATGTAAGTTGTTGGCCCTTATATTTTTTATATTATATATAATATGACTCTTGAACAAAATGATATTAGGTTATGTTTCCTTTTTTCTAGAAACAATATCACGATCGTCTGAAGGAGGTACAAACACAAAATGGTAAGGCCTCCCAGAACGGGATGCAGGAGATAGATGGGGCGACGAAACTTGAATTGTGGAAAGAGGTTGCTGGTGGAAAGAGTCGAGGTCGGTGTTATGGCACTGCAGACTTTGCTTTAAACCTCCGGCGTGGTGTAACTTCGCTGACTCAGGAGTCTCGGGAACCTTATAGTGGTGGGTGTGATCATGCTATGCATCTAGAGGCCATTGATGCAGTCCGTAAAGAGGCTGCCGCAGCACATCAGGAGGCTGCTGCAGCACGTCAGGAGGCAGCCACAGCACGCCAGGAGGCAGCTGAGTCGAAACAACATTATCAGCATTTGGAGGAGCAGTTGCGCAAAGTAATGAAGCACATGAAAGCTCTAGAGCGCCAATCAGCAGGTGCTTTCACAAGTGTGAGTCAAGCTCGCAGGGGACGCCAATCAGCAGGTGCTTTCACAAGTGCGAGTCAAGCTCGCAGGGGACATCCTCGCTATGATGATGACCATTCACTAGACGAGTTCTTAGCAGACCGTCGAAGAAAGAAACATCTAGCTCTAAGGCGACATTCTCATTATGATGACGACTATTCAGTAGATGAGATCTTCCCAAACCGTCGCCAAAAACATCAAGCTCACAAGAGACATTATCACTATGATGATGAGGATTCGCTGGATTCACTCTTACCAAAGCATCATCAAGCTGAAAGGGGACATCCTCGCTACGATGATGAGGATTCACTAGATGAGGTTTTACCAAAGCAGCGTCAAGCTAAAAGGGGTCGTTCTCACTATGACGACGACGACTCTCTAGATGAGGTCTTACCAAAGCAACATCATGCTAAAAGGGGACATCCTCACTATGACGATGATGACGATTTGCCAGACGGGGTCTTACCAAAGCAACGACAAGCTAAAAAGCGGCATCCTCACCATGATAATGACGAGGATTCGCTACATGAGGACTTACCAAAGAATCATCAAGCTAAAAGGGGACGTCCTCACTATGATGACGAAGACAATTTGTTAGATGGGGTTTTACCAAAGCAACCTCAAGCTAAAAAGCGACATCCTCACTATGATAATGATGGGGATTCGTTACACGAGGACTTACCAAAGAATCATCAAGCTGAAAGGGGACAGCCTCACTATGATGATGACGATGACGATTTGCCAGATGGGGTTTTACCAAAGCAACGTCAAGCTAAAAAGCTACATCCTCACTATGATAATGATGAGGATTCGCTACATGAGGACTTACCAAAGAATCATCAAGCTAAAAGGGGACGTCCTCTTTATGATGACACCGATTCACTAGACGAGGTCTTACCAGCCCGTCGCCGTCGTCATTACCGTAGTTGA

Protein sequence

>MS.gene065793.t1

MSLLVEFRSLLRRPRNNPAFCLRERSSVHVQCASVWAPSAAPAAAIKHAIQSHFQGPFYRWSETPEDVREYWWKLFGDKIAWDPRDHGYIKKTFQTRGAKRLSDMLSKVRKKGTRPHWICEEAWKGLNAHWEGEAFIKISSQNKTNRNSCKGGAVHTTGRKAHVDVALSMAQELGRSVDPDELFLATHKRKSGNWVDDRSQTTYKQYHDRLKEVQTQNGKASQNGMQEIDGATKLELWKEVAGGKSRGRCYGTADFALNLRRGVTSLTQESREPYSGGCDHAMHLEAIDAVRKEAAAAHQEAAAARQEAATARQEAAESKQHYQHLEEQLRKVMKHMKALERQSAGAFTSVSQARRGRQSAGAFTSASQARRGHPRYDDDHSLDEFLADRRRKKHLALRRHSHYDDDYSVDEIFPNRRQKHQAHKRHYHYDDEDSLDSLLPKHHQAERGHPRYDDEDSLDEVLPKQRQAKRGRSHYDDDDSLDEVLPKQHHAKRGHPHYDDDDDLPDGVLPKQRQAKKRHPHHDNDEDSLHEDLPKNHQAKRGRPHYDDEDNLLDGVLPKQPQAKKRHPHYDNDGDSLHEDLPKNHQAERGQPHYDDDDDDLPDGVLPKQRQAKKLHPHYDNDEDSLHEDLPKNHQAKRGRPLYDDTDSLDEVLPARRRRHYRS