Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066716.t1 | XP_013455017.1 | 97.6 | 255 | 6 | 0 | 1 | 255 | 1 | 255 | 2.30E-138 | 501.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066716.t1 | O80934 | 78.3 | 254 | 55 | 0 | 2 | 255 | 72 | 325 | 8.0e-116 | 417.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066716.t1 | A0A072UT49 | 97.6 | 255 | 6 | 0 | 1 | 255 | 1 | 255 | 1.6e-138 | 501.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene066716 | 0.814111 | 1.82E-51 | -1.69E-46 |
| MS.gene049151 | MS.gene066716 | 0.815133 | 1.08E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene066716 | 0.807486 | 4.94E-50 | -1.69E-46 |
| MS.gene049260 | MS.gene066716 | 0.84747 | 1.13E-59 | -1.69E-46 |
| MS.gene049297 | MS.gene066716 | 0.808993 | 2.36E-50 | -1.69E-46 |
| MS.gene04933 | MS.gene066716 | 0.812006 | 5.27E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene066716 | 0.83983 | 1.25E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene066716 | 0.866688 | 2.38E-65 | -1.69E-46 |
| MS.gene050226 | MS.gene066716 | 0.850339 | 1.81E-60 | -1.69E-46 |
| MS.gene050227 | MS.gene066716 | 0.843661 | 1.22E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene066716 | 0.85757 | 1.49E-62 | -1.69E-46 |
| MS.gene050301 | MS.gene066716 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene066716 | -0.831288 | 1.82E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene066716 | 0.804191 | 2.43E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene066716 | 0.823442 | 1.38E-53 | -1.69E-46 |
| MS.gene050623 | MS.gene066716 | -0.851174 | 1.05E-60 | -1.69E-46 |
| MS.gene050642 | MS.gene066716 | 0.82056 | 6.43E-53 | -1.69E-46 |
| MS.gene050762 | MS.gene066716 | 0.848188 | 7.18E-60 | -1.69E-46 |
| MS.gene050763 | MS.gene066716 | 0.848885 | 4.61E-60 | -1.69E-46 |
| MS.gene050987 | MS.gene066716 | 0.807495 | 4.92E-50 | -1.69E-46 |
| MS.gene05119 | MS.gene066716 | -0.832481 | 9.22E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene066716 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene066716 | 0.823365 | 1.44E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene066716 | 0.846863 | 1.66E-59 | -1.69E-46 |
| MS.gene051860 | MS.gene066716 | 0.855545 | 5.87E-62 | -1.69E-46 |
| MS.gene051983 | MS.gene066716 | 0.854092 | 1.55E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene066716 | 0.811223 | 7.80E-51 | -1.69E-46 |
| MS.gene052115 | MS.gene066716 | 0.815679 | 8.17E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene066716 | 0.82274 | 2.01E-53 | -1.69E-46 |
| MS.gene052207 | MS.gene066716 | 0.810974 | 8.83E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene066716 | 0.803927 | 2.76E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene066716 | -0.841162 | 5.61E-58 | -1.69E-46 |
| MS.gene052376 | MS.gene066716 | 0.80751 | 4.88E-50 | -1.69E-46 |
| MS.gene053216 | MS.gene066716 | 0.813583 | 2.38E-51 | -1.69E-46 |
| MS.gene053577 | MS.gene066716 | 0.800963 | 1.13E-48 | -1.69E-46 |
| MS.gene053630 | MS.gene066716 | 0.802379 | 5.77E-49 | -1.69E-46 |
| MS.gene053811 | MS.gene066716 | 0.82147 | 3.97E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene066716 | 0.870079 | 1.91E-66 | -1.69E-46 |
| MS.gene054379 | MS.gene066716 | 0.84446 | 7.46E-59 | -1.69E-46 |
| MS.gene054473 | MS.gene066716 | 0.807116 | 5.91E-50 | -1.69E-46 |
| MS.gene054542 | MS.gene066716 | 0.814212 | 1.73E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene066716 | 0.889307 | 2.72E-73 | -1.69E-46 |
| MS.gene054942 | MS.gene066716 | 0.828968 | 6.69E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene066716 | 0.823988 | 1.03E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene066716 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene066716 | 0.811443 | 6.98E-51 | -1.69E-46 |
| MS.gene055859 | MS.gene066716 | 0.801663 | 8.10E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene066716 | -0.820978 | 5.15E-53 | -1.69E-46 |
| MS.gene056447 | MS.gene066716 | 0.804595 | 2.00E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene066716 | 0.840554 | 8.11E-58 | -1.69E-46 |
| MS.gene056979 | MS.gene066716 | 0.844896 | 5.69E-59 | -1.69E-46 |
| MS.gene057260 | MS.gene066716 | 0.801691 | 7.99E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene066716 | 0.832197 | 1.08E-55 | -1.69E-46 |
| MS.gene057469 | MS.gene066716 | 0.837796 | 4.21E-57 | -1.69E-46 |
| MS.gene05761 | MS.gene066716 | 0.83077 | 2.44E-55 | -1.69E-46 |
| MS.gene057754 | MS.gene066716 | 0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene066716 | 0.806283 | 8.87E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene066716 | 0.827459 | 1.55E-54 | -1.69E-46 |
| MS.gene058182 | MS.gene066716 | 0.832066 | 1.17E-55 | -1.69E-46 |
| MS.gene058399 | MS.gene066716 | 0.805805 | 1.12E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene066716 | 0.811809 | 5.81E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene066716 | 0.82326 | 1.52E-53 | -1.69E-46 |
| MS.gene058845 | MS.gene066716 | 0.809195 | 2.13E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene066716 | 0.811389 | 7.17E-51 | -1.69E-46 |
| MS.gene059128 | MS.gene066716 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene059285 | MS.gene066716 | 0.807771 | 4.30E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene066716 | 0.816989 | 4.16E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene066716 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene066716 | 0.828268 | 9.88E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene066716 | 0.82567 | 4.13E-54 | -1.69E-46 |
| MS.gene059899 | MS.gene066716 | 0.849821 | 2.53E-60 | -1.69E-46 |
| MS.gene060084 | MS.gene066716 | 0.851005 | 1.18E-60 | -1.69E-46 |
| MS.gene060297 | MS.gene066716 | 0.802324 | 5.92E-49 | -1.69E-46 |
| MS.gene060476 | MS.gene066716 | 0.82452 | 7.72E-54 | -1.69E-46 |
| MS.gene060480 | MS.gene066716 | 0.829186 | 5.93E-55 | -1.69E-46 |
| MS.gene060495 | MS.gene066716 | 0.814785 | 1.29E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene066716 | 0.808141 | 3.58E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene066716 | 0.807993 | 3.85E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene066716 | 0.800033 | 1.74E-48 | -1.69E-46 |
| MS.gene061049 | MS.gene066716 | 0.816619 | 5.04E-52 | -1.69E-46 |
| MS.gene061071 | MS.gene066716 | 0.800999 | 1.11E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066716.t1 | MTR_4g021815 | 97.647 | 255 | 6 | 0 | 1 | 255 | 1 | 255 | 0.0 | 511 |
| MS.gene066716.t1 | MTR_7g062140 | 81.569 | 255 | 47 | 0 | 1 | 255 | 75 | 329 | 6.80e-158 | 441 |
| MS.gene066716.t1 | MTR_8g010700 | 30.508 | 236 | 125 | 8 | 35 | 248 | 100 | 318 | 9.57e-25 | 100 |
| MS.gene066716.t1 | MTR_4g115730 | 28.731 | 268 | 143 | 12 | 4 | 254 | 16 | 252 | 4.91e-14 | 70.1 |
| MS.gene066716.t1 | MTR_4g068970 | 47.297 | 74 | 38 | 1 | 107 | 179 | 183 | 256 | 5.32e-14 | 71.6 |
| MS.gene066716.t1 | MTR_4g115730 | 28.731 | 268 | 143 | 12 | 4 | 254 | 56 | 292 | 5.82e-14 | 70.5 |
| MS.gene066716.t1 | MTR_8g010600 | 33.621 | 116 | 58 | 3 | 153 | 253 | 22 | 133 | 5.52e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066716.t1 | AT2G37660 | 79.839 | 248 | 50 | 0 | 8 | 255 | 78 | 325 | 4.54e-153 | 429 |
| MS.gene066716.t1 | AT5G02240 | 80.645 | 248 | 48 | 0 | 8 | 255 | 6 | 253 | 1.03e-150 | 421 |
| MS.gene066716.t1 | AT4G31530 | 31.405 | 242 | 127 | 8 | 35 | 254 | 100 | 324 | 3.64e-24 | 99.0 |
| MS.gene066716.t1 | AT4G31530 | 31.963 | 219 | 111 | 7 | 35 | 232 | 100 | 301 | 2.18e-22 | 94.4 |
| MS.gene066716.t1 | AT2G34460 | 30.588 | 255 | 139 | 11 | 9 | 251 | 49 | 277 | 1.15e-18 | 83.6 |
| MS.gene066716.t1 | AT3G18890 | 28.910 | 211 | 113 | 6 | 9 | 198 | 84 | 278 | 7.49e-13 | 68.2 |
Find 71 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGTGTTGGTTGGGTCTA+TGG | 0.227152 | 4.3:-76439581 | MS.gene066716:CDS |
| TAACCATCCTTTGAACAGTT+TGG | 0.309070 | 4.3:-76439545 | MS.gene066716:CDS |
| GAAGAATATCTGTCCAATTC+TGG | 0.321510 | 4.3:-76439305 | MS.gene066716:CDS |
| AACCATCCTTTGAACAGTTT+GGG | 0.323678 | 4.3:-76439544 | MS.gene066716:CDS |
| CCTTTGAACAGTTTGGGAAA+TGG | 0.335160 | 4.3:-76439538 | MS.gene066716:CDS |
| GAAGAAAGCAAACAGAAAAT+TGG | 0.341940 | 4.3:-76440525 | MS.gene066716:CDS |
| GCATCTGTACCTTGAATTGC+AGG | 0.352388 | 4.3:+76440450 | None:intergenic |
| AAACTCAGGCCTTCCACCTT+TGG | 0.364997 | 4.3:+76440374 | None:intergenic |
| CGTGTAAGGAACACCAGAAT+TGG | 0.372936 | 4.3:+76439292 | None:intergenic |
| CAAACCACTGTCCTTGTTAC+CGG | 0.374374 | 4.3:-76442225 | MS.gene066716:CDS |
| CCAAACCTCTGGCAATATAT+TGG | 0.375239 | 4.3:+76440556 | None:intergenic |
| TATGATAGGTTGACTGGATT+GGG | 0.379614 | 4.3:-76440231 | MS.gene066716:intron |
| AAACTGTTCAAAGGATGGTT+AGG | 0.380370 | 4.3:+76439547 | None:intergenic |
| ATTGTGTTGGTTGGGTCTAT+GGG | 0.382254 | 4.3:-76439580 | MS.gene066716:CDS |
| CCAATATATTGCCAGAGGTT+TGG | 0.384643 | 4.3:-76440556 | MS.gene066716:CDS |
| TTGATAAAGAAGGAGGTGTT+CGG | 0.404923 | 4.3:-76438437 | MS.gene066716:CDS |
| AATTGCAGGAACAATGCTTT+CGG | 0.413542 | 4.3:+76440464 | None:intergenic |
| AAAGCCTTGAAGTCCTTTGT+TGG | 0.422367 | 4.3:+76437456 | None:intergenic |
| CAAACCCAGGTTTCATTTGT+GGG | 0.437050 | 4.3:+76440403 | None:intergenic |
| AATAGCATTAGCACCTGTTC+GGG | 0.437397 | 4.3:+76440330 | None:intergenic |
| GTTGGTTCACCTGCACCCTC+AGG | 0.437593 | 4.3:+76437474 | None:intergenic |
| TAATAGCATTAGCACCTGTT+CGG | 0.437611 | 4.3:+76440329 | None:intergenic |
| ATTCAATTCAATTCAATGGC+AGG | 0.439004 | 4.3:-76442255 | None:intergenic |
| ATATGATAGGTTGACTGGAT+TGG | 0.441585 | 4.3:-76440232 | MS.gene066716:intron |
| TTTGGGAAATGGAAATATAC+TGG | 0.444100 | 4.3:-76439527 | MS.gene066716:intron |
| AGCATTGTTCCTGCAATTCA+AGG | 0.445346 | 4.3:-76440459 | MS.gene066716:CDS |
| TCAAACCCAGGTTTCATTTG+TGG | 0.465991 | 4.3:+76440402 | None:intergenic |
| TGTAGCAGAAGTCTGCGTTC+AGG | 0.467309 | 4.3:-76438349 | MS.gene066716:intron |
| TGAACCAACAAAGGACTTCA+AGG | 0.468496 | 4.3:-76437460 | MS.gene066716:CDS |
| ACTGTCCTTGTTACCGGTGC+TGG | 0.470130 | 4.3:-76442219 | MS.gene066716:CDS |
| TTCTGATCTAACCAAACCTC+TGG | 0.473775 | 4.3:+76440545 | None:intergenic |
| TTGACAGGCACTAAATTATG+AGG | 0.476024 | 4.3:-76437532 | MS.gene066716:intron |
| TGATAAAGAAGGAGGTGTTC+GGG | 0.478613 | 4.3:-76438436 | MS.gene066716:CDS |
| TGAAGCATATTGTGTTGGTT+GGG | 0.478830 | 4.3:-76439588 | MS.gene066716:CDS |
| CTATAAACAGCTAAGGCTGC+AGG | 0.498326 | 4.3:-76439613 | MS.gene066716:intron |
| TCAGGCCTTCCACCTTTGGT+TGG | 0.499708 | 4.3:+76440378 | None:intergenic |
| TGATGGTTCATATCCCGAAC+AGG | 0.500943 | 4.3:-76440343 | MS.gene066716:intron |
| TTCCCAAACTGTTCAAAGGA+TGG | 0.501526 | 4.3:+76439542 | None:intergenic |
| AACTGTTCAAAGGATGGTTA+GGG | 0.504635 | 4.3:+76439548 | None:intergenic |
| CCATTTCCCAAACTGTTCAA+AGG | 0.506648 | 4.3:+76439538 | None:intergenic |
| GTGTTCCTTACACGATCATA+AGG | 0.509941 | 4.3:-76439283 | MS.gene066716:intron |
| ACCGGTGCTGGTGGTCGCAC+AGG | 0.517177 | 4.3:-76442207 | MS.gene066716:intron |
| GTGTACCTTATGATCGTGTA+AGG | 0.517539 | 4.3:+76439278 | None:intergenic |
| GTGAAGCATATTGTGTTGGT+TGG | 0.518358 | 4.3:-76439589 | MS.gene066716:CDS |
| GGTGTTCGGGAACTCATTGT+AGG | 0.524165 | 4.3:-76438423 | MS.gene066716:CDS |
| GCATCAAAACCTGAGGGTGC+AGG | 0.524749 | 4.3:-76437483 | MS.gene066716:CDS |
| TTATGAGGAGACTAAATTCA+AGG | 0.530143 | 4.3:-76437517 | MS.gene066716:CDS |
| GTGTTGGTTGGGTCTATGGG+TGG | 0.540126 | 4.3:-76439577 | MS.gene066716:CDS |
| CATTGTTGATTCAGACCTGG+TGG | 0.546083 | 4.3:-76438465 | MS.gene066716:intron |
| GCTGTCCCACAAATGAAACC+TGG | 0.549601 | 4.3:-76440408 | MS.gene066716:CDS |
| GAAAGCAAACAGAAAATTGG+TGG | 0.572686 | 4.3:-76440522 | MS.gene066716:CDS |
| CCTTTGGTTGGATCAAACCC+AGG | 0.573204 | 4.3:+76440390 | None:intergenic |
| GGTGGCTTGCTTGATAAAGA+AGG | 0.575976 | 4.3:-76438447 | MS.gene066716:CDS |
| ACCTGTGCGACCACCAGCAC+CGG | 0.578050 | 4.3:+76442206 | None:intergenic |
| GACCACCAGCACCGGTAACA+AGG | 0.584640 | 4.3:+76442214 | None:intergenic |
| TCTTTATCAAGCAAGCCACC+AGG | 0.585110 | 4.3:+76438450 | None:intergenic |
| CCATCATCAAAATAAAACTC+AGG | 0.589184 | 4.3:+76440360 | None:intergenic |
| ACTTCTGCTACATCAGCTCT+AGG | 0.589981 | 4.3:+76438360 | None:intergenic |
| TCGGGAACTCATTGTAGGAA+AGG | 0.591768 | 4.3:-76438418 | MS.gene066716:CDS |
| GGGTTTGATCCAACCAAAGG+TGG | 0.593347 | 4.3:-76440387 | MS.gene066716:CDS |
| GTCCTTGTTACCGGTGCTGG+TGG | 0.600483 | 4.3:-76442216 | MS.gene066716:CDS |
| TTGATCCAACCAAAGGTGGA+AGG | 0.601871 | 4.3:-76440383 | MS.gene066716:CDS |
| CGCGACCAATATATTGCCAG+AGG | 0.611486 | 4.3:-76440561 | MS.gene066716:CDS |
| CTGTCCCACAAATGAAACCT+GGG | 0.620890 | 4.3:-76440407 | MS.gene066716:CDS |
| AGGAGTGAAGCATATTGTGT+TGG | 0.636269 | 4.3:-76439593 | MS.gene066716:CDS |
| GGGTGCAGGTGAACCAACAA+AGG | 0.644031 | 4.3:-76437469 | MS.gene066716:CDS |
| GACCTAGCATCAAAACCTGA+GGG | 0.644948 | 4.3:-76437489 | MS.gene066716:CDS |
| CCTGGGTTTGATCCAACCAA+AGG | 0.647766 | 4.3:-76440390 | MS.gene066716:CDS |
| TGACCTAGCATCAAAACCTG+AGG | 0.657872 | 4.3:-76437490 | MS.gene066716:CDS |
| AGCACCGGTAACAAGGACAG+TGG | 0.733144 | 4.3:+76442221 | None:intergenic |
| GGCTTGCTTGATAAAGAAGG+AGG | 0.735031 | 4.3:-76438444 | MS.gene066716:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTTAATTTACACAAA+GGG | + | chr4.3:76438239-76438258 | None:intergenic | 10.0% |
| !!! | AAATTTTTTTAAGCATATAT+AGG | - | chr4.3:76440982-76441001 | MS.gene066716:intron | 10.0% |
| !!! | AATTTTTTTAAGCATATATA+GGG | - | chr4.3:76440983-76441002 | MS.gene066716:intron | 10.0% |
| !!! | ATTTTCAATTTTATTTGAAT+TGG | - | chr4.3:76437605-76437624 | MS.gene066716:intron | 10.0% |
| !!! | CAAAAATAAAAAAAACATTT+TGG | + | chr4.3:76437732-76437751 | None:intergenic | 10.0% |
| !!! | TTTTCAATTTTATTTGAATT+GGG | - | chr4.3:76437606-76437625 | MS.gene066716:intron | 10.0% |
| !! | ATCAATATCAAAAATAGAAT+CGG | - | chr4.3:76442042-76442061 | MS.gene066716:intron | 15.0% |
| !! | ATTATGATTATAAATTCTAG+AGG | + | chr4.3:76437581-76437600 | None:intergenic | 15.0% |
| !! | GAAAATAAAATTAGTGTAAA+AGG | + | chr4.3:76438333-76438352 | None:intergenic | 15.0% |
| !! | TTTATCAAATATTCAATTGT+TGG | + | chr4.3:76441011-76441030 | None:intergenic | 15.0% |
| !!! | AAAATGTTATCATTCTATTT+TGG | + | chr4.3:76440261-76440280 | None:intergenic | 15.0% |
| !!! | ACTAATTTTATTTTCAAACA+TGG | - | chr4.3:76438338-76438357 | MS.gene066716:intron | 15.0% |
| !!! | ATTATGAAACATTTTTATCT+TGG | - | chr4.3:76440693-76440712 | MS.gene066716:intron | 15.0% |
| !!! | GAAAATTTTAATTTACACAA+AGG | + | chr4.3:76438240-76438259 | None:intergenic | 15.0% |
| !!! | TTTCAATTTTATTTGAATTG+GGG | - | chr4.3:76437607-76437626 | MS.gene066716:intron | 15.0% |
| !! | AAACAGATCCTTATATTATT+AGG | + | chr4.3:76439694-76439713 | None:intergenic | 20.0% |
| !! | AAATGAAGTAACTAAAGTAT+TGG | + | chr4.3:76440182-76440201 | None:intergenic | 20.0% |
| !! | ACAAATTTGACTAAAAAAAG+TGG | + | chr4.3:76441717-76441736 | None:intergenic | 20.0% |
| !! | ATACCAAACCTAATAATATA+AGG | - | chr4.3:76439683-76439702 | MS.gene066716:intron | 20.0% |
| !! | ATATTATCTCTTATAGAACT+TGG | - | chr4.3:76441343-76441362 | MS.gene066716:intron | 20.0% |
| !! | CTACAGAAAAATTACAAATA+GGG | - | chr4.3:76438479-76438498 | MS.gene066716:intron | 20.0% |
| !! | TAAAAAACTTTCAGAATACT+TGG | - | chr4.3:76440621-76440640 | MS.gene066716:intron | 20.0% |
| !! | TACCAAAAATAGTACTTATT+AGG | - | chr4.3:76438711-76438730 | MS.gene066716:intron | 20.0% |
| !! | TATTATCTCTTATAGAACTT+GGG | - | chr4.3:76441344-76441363 | MS.gene066716:intron | 20.0% |
| !! | TTTAATCATTGAAATTCTAG+TGG | - | chr4.3:76441452-76441471 | MS.gene066716:intron | 20.0% |
| !!! | AACTCATATATGTTTTAACA+TGG | + | chr4.3:76440426-76440445 | None:intergenic | 20.0% |
| !!! | AATAGTGATTTGTTCAAATT+CGG | + | chr4.3:76440765-76440784 | None:intergenic | 20.0% |
| !!! | ATAAAAACTTAGGCATTTTT+AGG | + | chr4.3:76439563-76439582 | None:intergenic | 20.0% |
| !!! | ATTCTCTAAGATAAAAACTT+AGG | + | chr4.3:76439573-76439592 | None:intergenic | 20.0% |
| !!! | CAGATACGTTTTAAAAAAAA+TGG | + | chr4.3:76439790-76439809 | None:intergenic | 20.0% |
| !!! | TATATTTTCAAAAGCTGAAT+CGG | - | chr4.3:76442073-76442092 | MS.gene066716:intron | 20.0% |
| !!! | TTATTTTCAAACATGGAAAA+AGG | - | chr4.3:76438345-76438364 | MS.gene066716:intron | 20.0% |
| !!! | TTCCTAATAAGTACTATTTT+TGG | + | chr4.3:76438716-76438735 | None:intergenic | 20.0% |
| ! | AAAAATTACAAATAGGGAGA+GGG | - | chr4.3:76438485-76438504 | MS.gene066716:intron | 25.0% |
| ! | AAATGTTTGTAGGAAGTAAA+CGG | - | chr4.3:76439931-76439950 | MS.gene066716:intron | 25.0% |
| ! | AACCTATCATATGAAAAAGT+AGG | + | chr4.3:76439428-76439447 | None:intergenic | 25.0% |
| ! | ACACTATAGATTTGTATTGA+TGG | + | chr4.3:76441616-76441635 | None:intergenic | 25.0% |
| ! | CATTTGTAACAACATTTGAA+AGG | + | chr4.3:76438296-76438315 | None:intergenic | 25.0% |
| ! | CCTACAGAAAAATTACAAAT+AGG | - | chr4.3:76438478-76438497 | MS.gene066716:intron | 25.0% |
| ! | CTTTGATTAAACAAACGAAA+GGG | - | chr4.3:76438444-76438463 | MS.gene066716:CDS | 25.0% |
| ! | GAAAATGATAACAGAAAACA+TGG | + | chr4.3:76439722-76439741 | None:intergenic | 25.0% |
| ! | GATCCTTATATTATTAGGTT+TGG | + | chr4.3:76439689-76439708 | None:intergenic | 25.0% |
| ! | GTATATTCAAAATAGTTTCC+TGG | + | chr4.3:76440566-76440585 | None:intergenic | 25.0% |
| ! | TAACATACCAAAATGTTACT+GGG | - | chr4.3:76437867-76437886 | MS.gene066716:intron | 25.0% |
| ! | TACAAAACATTGTCAATAAG+TGG | - | chr4.3:76440806-76440825 | MS.gene066716:intron | 25.0% |
| ! | TAGCGATACATTTATTACTT+GGG | + | chr4.3:76438813-76438832 | None:intergenic | 25.0% |
| ! | TATAGTTTCATCTTAATTGC+AGG | - | chr4.3:76440323-76440342 | MS.gene066716:intron | 25.0% |
| ! | TATTCTACTTCAATACTAGT+CGG | + | chr4.3:76438590-76438609 | None:intergenic | 25.0% |
| ! | TCATATAGTTCAACTAGTTA+AGG | - | chr4.3:76438391-76438410 | MS.gene066716:CDS | 25.0% |
| ! | TCTTTGATTAAACAAACGAA+AGG | - | chr4.3:76438443-76438462 | MS.gene066716:CDS | 25.0% |
| ! | TGAAAACTGAAAATGTTTGT+AGG | - | chr4.3:76439921-76439940 | MS.gene066716:intron | 25.0% |
| ! | TGCAATATTATCTTGATATC+CGG | - | chr4.3:76440588-76440607 | MS.gene066716:CDS | 25.0% |
| ! | TTAACATACCAAAATGTTAC+TGG | - | chr4.3:76437866-76437885 | MS.gene066716:intron | 25.0% |
| ! | TTAGCGATACATTTATTACT+TGG | + | chr4.3:76438814-76438833 | None:intergenic | 25.0% |
| ! | TTGAATCTTGAATTACTTTG+AGG | - | chr4.3:76441774-76441793 | MS.gene066716:intron | 25.0% |
| ! | TTTACCAGAAATCATTAGTT+GGG | + | chr4.3:76439968-76439987 | None:intergenic | 25.0% |
| ! | TTTATCTCTATAAACAGCTA+AGG | - | chr4.3:76440048-76440067 | MS.gene066716:intron | 25.0% |
| !! | ACTATAGATTTGTATTGATG+GGG | + | chr4.3:76441614-76441633 | None:intergenic | 25.0% |
| !! | ATTGATTATACTAGTCTAGT+TGG | + | chr4.3:76441994-76442013 | None:intergenic | 25.0% |
| !! | CACTATAGATTTGTATTGAT+GGG | + | chr4.3:76441615-76441634 | None:intergenic | 25.0% |
| !! | CCTATTTGTAATTTTTCTGT+AGG | + | chr4.3:76438481-76438500 | None:intergenic | 25.0% |
| !! | GAAGAACTATTTTATGAATC+GGG | + | chr4.3:76441905-76441924 | None:intergenic | 25.0% |
| !! | GGAAGAACTATTTTATGAAT+CGG | + | chr4.3:76441906-76441925 | None:intergenic | 25.0% |
| !! | GTGACTTTGATTTAAAATCT+TGG | + | chr4.3:76437936-76437955 | None:intergenic | 25.0% |
| !! | TCTTGGATTAGATATTTCTA+CGG | + | chr4.3:76437919-76437938 | None:intergenic | 25.0% |
| !! | TGAGAATTTTCTCAAATTGA+AGG | - | chr4.3:76437642-76437661 | MS.gene066716:intron | 25.0% |
| !! | TGTTATCATTTTCACTTCAA+CGG | - | chr4.3:76439729-76439748 | MS.gene066716:intron | 25.0% |
| !! | TTCACATTGATTAGTGTTAT+TGG | + | chr4.3:76438203-76438222 | None:intergenic | 25.0% |
| !! | TTCATTTTAAATTGCCAACA+AGG | + | chr4.3:76439905-76439924 | None:intergenic | 25.0% |
| !! | TTGAAGTTTTCAATCTTCTT+AGG | - | chr4.3:76439599-76439618 | MS.gene066716:CDS | 25.0% |
| !!! | AGTTTTTTAACTCAAACAAC+CGG | + | chr4.3:76440610-76440629 | None:intergenic | 25.0% |
| !!! | CTATTTTTGGTATAGTAGAT+TGG | + | chr4.3:76438703-76438722 | None:intergenic | 25.0% |
| !!! | GAACTCTTTCTTTAAAATCT+TGG | - | chr4.3:76438084-76438103 | MS.gene066716:intron | 25.0% |
| !!! | GCTTTTGAAAATATAGTCAT+TGG | + | chr4.3:76442068-76442087 | None:intergenic | 25.0% |
| !!! | TCTAGGAATAGTTTTAGTTT+CGG | + | chr4.3:76441294-76441313 | None:intergenic | 25.0% |
| !!! | TCTTTTCAGTTTTGTTTTCA+CGG | - | chr4.3:76440453-76440472 | MS.gene066716:CDS | 25.0% |
| !!! | TTTGTTTTGTTACAGAATTG+AGG | - | chr4.3:76437546-76437565 | MS.gene066716:intron | 25.0% |
| !!! | TTTTTTAGTCAAATTTGTGC+AGG | - | chr4.3:76441719-76441738 | MS.gene066716:intron | 25.0% |
| AAAATGTTCTTAGCATGCAT+AGG | + | chr4.3:76439372-76439391 | None:intergenic | 30.0% | |
| AACATACCAAAATGTTACTG+GGG | - | chr4.3:76437868-76437887 | MS.gene066716:intron | 30.0% | |
| AATATGTGCTTATGTTATGG+CGG | - | chr4.3:76437892-76437911 | MS.gene066716:intron | 30.0% | |
| AATGTTTGTAGGAAGTAAAC+GGG | - | chr4.3:76439932-76439951 | MS.gene066716:intron | 30.0% | |
| ACTTGCTTTCATGTTTAGAA+AGG | + | chr4.3:76438640-76438659 | None:intergenic | 30.0% | |
| AGCGATACATTTATTACTTG+GGG | + | chr4.3:76438812-76438831 | None:intergenic | 30.0% | |
| ATTGACAAACAATGGTATGT+AGG | - | chr4.3:76440922-76440941 | MS.gene066716:intron | 30.0% | |
| ATTTGACTAAAAAAAGTGGC+AGG | + | chr4.3:76441713-76441732 | None:intergenic | 30.0% | |
| CAGAAAAATCAAATAGATGC+TGG | - | chr4.3:76439460-76439479 | MS.gene066716:intron | 30.0% | |
| CCATCATCAAAATAAAACTC+AGG | + | chr4.3:76439311-76439330 | None:intergenic | 30.0% | |
| CGTTTAAAAACATTCCGAAT+GGG | + | chr4.3:76439642-76439661 | None:intergenic | 30.0% | |
| GAAAAATTACAAATAGGGAG+AGG | - | chr4.3:76438484-76438503 | MS.gene066716:intron | 30.0% | |
| GAAGAAAGCAAACAGAAAAT+TGG | - | chr4.3:76439143-76439162 | MS.gene066716:intron | 30.0% | |
| GTTTAAAAACATTCCGAATG+GGG | + | chr4.3:76439641-76439660 | None:intergenic | 30.0% | |
| GTTTACCAGAAATCATTAGT+TGG | + | chr4.3:76439969-76439988 | None:intergenic | 30.0% | |
| TATGATGTTCACATTATCCT+TGG | + | chr4.3:76438563-76438582 | None:intergenic | 30.0% | |
| TCAAAAACGAGAATTGATCT+GGG | + | chr4.3:76442243-76442262 | None:intergenic | 30.0% | |
| TCAAGGTTCATATTGTGAAT+TGG | + | chr4.3:76441927-76441946 | None:intergenic | 30.0% | |
| TCTACTAGTAGTATATGACT+TGG | - | chr4.3:76438897-76438916 | MS.gene066716:intron | 30.0% | |
| TGATAAACGTACTCATCTAA+TGG | - | chr4.3:76441043-76441062 | MS.gene066716:intron | 30.0% | |
| TTATGAGGAGACTAAATTCA+AGG | - | chr4.3:76442151-76442170 | MS.gene066716:intron | 30.0% | |
| TTCAATCTTCTTAGGAATCT+TGG | - | chr4.3:76439607-76439626 | MS.gene066716:intron | 30.0% | |
| TTCTAAACATGAAAGCAAGT+TGG | - | chr4.3:76438640-76438659 | MS.gene066716:intron | 30.0% | |
| TTGATCGAATTTGTCTCATA+TGG | - | chr4.3:76441536-76441555 | MS.gene066716:intron | 30.0% | |
| TTGTCAATCACGAAAAATAG+TGG | + | chr4.3:76440910-76440929 | None:intergenic | 30.0% | |
| TTTAAAAACATTCCGAATGG+GGG | + | chr4.3:76439640-76439659 | None:intergenic | 30.0% | |
| TTTCATCTTAATTGCAGGTT+TGG | - | chr4.3:76440328-76440347 | MS.gene066716:intron | 30.0% | |
| TTTGACTAAAAAAAGTGGCA+GGG | + | chr4.3:76441712-76441731 | None:intergenic | 30.0% | |
| TTTGGGAAATGGAAATATAC+TGG | - | chr4.3:76440141-76440160 | MS.gene066716:intron | 30.0% | |
| ! | AATTTGACAGTAATTTTCCG+CGG | + | chr4.3:76437989-76438008 | None:intergenic | 30.0% |
| ! | AGATAAAAAGCACAAAACCA+TGG | - | chr4.3:76438051-76438070 | MS.gene066716:intron | 30.0% |
| ! | ATGCTCATAGTTTAAGTTAG+TGG | - | chr4.3:76437690-76437709 | MS.gene066716:intron | 30.0% |
| ! | ATTTTAAATTGCCAACAAGG+TGG | + | chr4.3:76439902-76439921 | None:intergenic | 30.0% |
| ! | CTTGATTTGATAACCATGTA+GGG | - | chr4.3:76441942-76441961 | MS.gene066716:intron | 30.0% |
| ! | TATACTACTAGTAGAAGTAC+AGG | + | chr4.3:76438892-76438911 | None:intergenic | 30.0% |
| ! | TGCTGATGATATTTTCATTG+GGG | - | chr4.3:76439169-76439188 | MS.gene066716:intron | 30.0% |
| ! | TTTTCGTGATTGACAAACAA+TGG | - | chr4.3:76440914-76440933 | MS.gene066716:intron | 30.0% |
| !! | CCATTCGGAATGTTTTTAAA+CGG | - | chr4.3:76439640-76439659 | MS.gene066716:intron | 30.0% |
| !! | GATTTTAAAGAAAGAGTTCG+CGG | + | chr4.3:76438083-76438102 | None:intergenic | 30.0% |
| !! | GTGCTGATGATATTTTCATT+GGG | - | chr4.3:76439168-76439187 | MS.gene066716:intron | 30.0% |
| !! | TTTGAAAGGTATAGCCTTAT+AGG | + | chr4.3:76438282-76438301 | None:intergenic | 30.0% |
| !! | TTTTCATATGATAGGTTGAC+TGG | - | chr4.3:76439431-76439450 | MS.gene066716:intron | 30.0% |
| !!! | CCTGAGTTTTATTTTGATGA+TGG | - | chr4.3:76439308-76439327 | MS.gene066716:CDS | 30.0% |
| !!! | CTTCATTTTGTTGATTTGAC+AGG | - | chr4.3:76442121-76442140 | MS.gene066716:intron | 30.0% |
| !!! | GACCTACTTTTTCATATGAT+AGG | - | chr4.3:76439423-76439442 | MS.gene066716:intron | 30.0% |
| !!! | GATTTGTTGGTTAACTTTTC+AGG | - | chr4.3:76439053-76439072 | MS.gene066716:intron | 30.0% |
| AAACTGTTCAAAGGATGGTT+AGG | + | chr4.3:76440124-76440143 | None:intergenic | 35.0% | |
| AACAATGGTATGTAGGTACT+TGG | - | chr4.3:76440929-76440948 | MS.gene066716:intron | 35.0% | |
| AACCATCCTTTGAACAGTTT+GGG | - | chr4.3:76440124-76440143 | MS.gene066716:intron | 35.0% | |
| AACTGTTCAAAGGATGGTTA+GGG | + | chr4.3:76440123-76440142 | None:intergenic | 35.0% | |
| AATTGCAGGAACAATGCTTT+CGG | + | chr4.3:76439207-76439226 | None:intergenic | 35.0% | |
| ACATACCAAAATGTTACTGG+GGG | - | chr4.3:76437869-76437888 | MS.gene066716:intron | 35.0% | |
| AGATGAAGCAAACTCAAAAG+TGG | - | chr4.3:76438775-76438794 | MS.gene066716:intron | 35.0% | |
| ATATGTGCTTATGTTATGGC+GGG | - | chr4.3:76437893-76437912 | MS.gene066716:intron | 35.0% | |
| ATGTTTGTAGGAAGTAAACG+GGG | - | chr4.3:76439933-76439952 | MS.gene066716:intron | 35.0% | |
| CCCTCACTATTGTATTAGAA+CGG | + | chr4.3:76438984-76439003 | None:intergenic | 35.0% | |
| CCGTTCTAATACAATAGTGA+GGG | - | chr4.3:76438981-76439000 | MS.gene066716:intron | 35.0% | |
| CCGTTTAAAAACATTCCGAA+TGG | + | chr4.3:76439643-76439662 | None:intergenic | 35.0% | |
| CCTACATGGTTATCAAATCA+AGG | + | chr4.3:76441944-76441963 | None:intergenic | 35.0% | |
| GAAAGCAAACAGAAAATTGG+TGG | - | chr4.3:76439146-76439165 | MS.gene066716:intron | 35.0% | |
| GAAGAATATCTGTCCAATTC+TGG | - | chr4.3:76440363-76440382 | MS.gene066716:CDS | 35.0% | |
| GAATCCCAACTAATGATTTC+TGG | - | chr4.3:76439961-76439980 | MS.gene066716:intron | 35.0% | |
| GAATCGGTTATTGTGAGATT+TGG | - | chr4.3:76442089-76442108 | MS.gene066716:intron | 35.0% | |
| GAGAAAGATGAAATAGATCG+AGG | - | chr4.3:76438749-76438768 | MS.gene066716:intron | 35.0% | |
| GGGAATATGTGCTTATGTTA+TGG | - | chr4.3:76437889-76437908 | MS.gene066716:intron | 35.0% | |
| GGTTCAGCTATGACTATTAA+AGG | + | chr4.3:76440545-76440564 | None:intergenic | 35.0% | |
| GTAGCAATGTTGTCAAATTG+CGG | - | chr4.3:76440718-76440737 | MS.gene066716:intron | 35.0% | |
| TAACCATCCTTTGAACAGTT+TGG | - | chr4.3:76440123-76440142 | MS.gene066716:intron | 35.0% | |
| TAACCATGTAGGGAAATATC+AGG | - | chr4.3:76441952-76441971 | MS.gene066716:intron | 35.0% | |
| TAATAGCATTAGCACCTGTT+CGG | + | chr4.3:76439342-76439361 | None:intergenic | 35.0% | |
| TAGAAATCCATCAAAGTCGT+AGG | - | chr4.3:76438117-76438136 | MS.gene066716:intron | 35.0% | |
| TCCGTTCTAATACAATAGTG+AGG | - | chr4.3:76438980-76438999 | MS.gene066716:intron | 35.0% | |
| TGTGTGAAATTCAGCCTATA+AGG | - | chr4.3:76438265-76438284 | MS.gene066716:intron | 35.0% | |
| TTAATAGTCATAGCTGAACC+AGG | - | chr4.3:76440545-76440564 | MS.gene066716:CDS | 35.0% | |
| TTATCCTTGGCAAAGACTAT+AGG | + | chr4.3:76438550-76438569 | None:intergenic | 35.0% | |
| TTCTATCCATTACTCGTACA+CGG | - | chr4.3:76439497-76439516 | MS.gene066716:intron | 35.0% | |
| TTGACAGGCACTAAATTATG+AGG | - | chr4.3:76442136-76442155 | MS.gene066716:intron | 35.0% | |
| TTGTCAATAAGTGGCTATAG+AGG | - | chr4.3:76440815-76440834 | MS.gene066716:intron | 35.0% | |
| TTTGGTATGTTAAACCCACT+TGG | + | chr4.3:76437859-76437878 | None:intergenic | 35.0% | |
| ! | ATATGATAGGTTGACTGGAT+TGG | - | chr4.3:76439436-76439455 | MS.gene066716:intron | 35.0% |
| ! | ATATTCCCCCAGTAACATTT+TGG | + | chr4.3:76437877-76437896 | None:intergenic | 35.0% |
| ! | CACTTTCTAGCAAAAACAAG+TGG | + | chr4.3:76441836-76441855 | None:intergenic | 35.0% |
| ! | CCTTGATTTGATAACCATGT+AGG | - | chr4.3:76441941-76441960 | MS.gene066716:intron | 35.0% |
| ! | GAACTCTCAATGTGATTTGT+TGG | - | chr4.3:76439040-76439059 | MS.gene066716:intron | 35.0% |
| ! | TATGATAGGTTGACTGGATT+GGG | - | chr4.3:76439437-76439456 | MS.gene066716:intron | 35.0% |
| ! | TGGCTCGTGAATTTGTTTAT+TGG | - | chr4.3:76441472-76441491 | MS.gene066716:intron | 35.0% |
| !! | ATACTTGGTGTCATTATCTG+TGG | - | chr4.3:76440636-76440655 | MS.gene066716:intron | 35.0% |
| !! | GTTTTAACATGGACAAGAAC+TGG | + | chr4.3:76440415-76440434 | None:intergenic | 35.0% |
| !! | TGAAGCATATTGTGTTGGTT+GGG | - | chr4.3:76440080-76440099 | MS.gene066716:intron | 35.0% |
| !! | TTGATAAAGAAGGAGGTGTT+CGG | - | chr4.3:76441231-76441250 | MS.gene066716:intron | 35.0% |
| !!! | GGTGCTGATGATATTTTCAT+TGG | - | chr4.3:76439167-76439186 | MS.gene066716:intron | 35.0% |
| AAAGCACAAAACCATGGCAA+CGG | - | chr4.3:76438057-76438076 | MS.gene066716:intron | 40.0% | |
| AAAGCCTTGAAGTCCTTTGT+TGG | + | chr4.3:76442215-76442234 | None:intergenic | 40.0% | |
| AACGTACTCATCTAATGGCT+TGG | - | chr4.3:76441048-76441067 | MS.gene066716:intron | 40.0% | |
| AATAGCATTAGCACCTGTTC+GGG | + | chr4.3:76439341-76439360 | None:intergenic | 40.0% | |
| AATGTCACCTACGACTTTGA+TGG | + | chr4.3:76438127-76438146 | None:intergenic | 40.0% | |
| ACGCGAATAATTGCGATAGA+GGG | + | chr4.3:76439872-76439891 | None:intergenic | 40.0% | |
| ACGTACTCATCTAATGGCTT+GGG | - | chr4.3:76441049-76441068 | MS.gene066716:intron | 40.0% | |
| AGACTATAGGAACTAGATGC+TGG | + | chr4.3:76438537-76438556 | None:intergenic | 40.0% | |
| AGCATTGTTCCTGCAATTCA+AGG | - | chr4.3:76439209-76439228 | MS.gene066716:intron | 40.0% | |
| AGGAGTGAAGCATATTGTGT+TGG | - | chr4.3:76440075-76440094 | MS.gene066716:intron | 40.0% | |
| AGTTCCTATAGTCTTTGCCA+AGG | - | chr4.3:76438543-76438562 | MS.gene066716:intron | 40.0% | |
| CAAACCCAGGTTTCATTTGT+GGG | + | chr4.3:76439268-76439287 | None:intergenic | 40.0% | |
| CCAAACCTCTGGCAATATAT+TGG | + | chr4.3:76439115-76439134 | None:intergenic | 40.0% | |
| CCAATATATTGCCAGAGGTT+TGG | - | chr4.3:76439112-76439131 | MS.gene066716:intron | 40.0% | |
| CCATTTCCCAAACTGTTCAA+AGG | + | chr4.3:76440133-76440152 | None:intergenic | 40.0% | |
| CCTTTGAACAGTTTGGGAAA+TGG | - | chr4.3:76440130-76440149 | MS.gene066716:intron | 40.0% | |
| CTAGCAAAAACAAGTGGCAT+AGG | + | chr4.3:76441830-76441849 | None:intergenic | 40.0% | |
| GCATGAGTGAATAACGACTT+TGG | + | chr4.3:76440010-76440029 | None:intergenic | 40.0% | |
| GTATGTTAAACCCACTTGGT+TGG | + | chr4.3:76437855-76437874 | None:intergenic | 40.0% | |
| GTGTACCTTATGATCGTGTA+AGG | + | chr4.3:76440393-76440412 | None:intergenic | 40.0% | |
| GTGTTCCTTACACGATCATA+AGG | - | chr4.3:76440385-76440404 | MS.gene066716:CDS | 40.0% | |
| GTTCCTGATATTTCCCTACA+TGG | + | chr4.3:76441958-76441977 | None:intergenic | 40.0% | |
| TAATTGCGATAGAGGGAAGA+TGG | + | chr4.3:76439865-76439884 | None:intergenic | 40.0% | |
| TCAAACCCAGGTTTCATTTG+TGG | + | chr4.3:76439269-76439288 | None:intergenic | 40.0% | |
| TCTATAGTACTGTAGTGCTG+CGG | - | chr4.3:76440839-76440858 | MS.gene066716:intron | 40.0% | |
| TGAACCAACAAAGGACTTCA+AGG | - | chr4.3:76442208-76442227 | MS.gene066716:CDS | 40.0% | |
| TGTGTGATCTCCTAGTTACA+CGG | - | chr4.3:76438177-76438196 | MS.gene066716:intron | 40.0% | |
| TTACACAAAGGGAGTTGAGT+CGG | + | chr4.3:76438228-76438247 | None:intergenic | 40.0% | |
| TTCCCAAACTGTTCAAAGGA+TGG | + | chr4.3:76440129-76440148 | None:intergenic | 40.0% | |
| TTCTGATCTAACCAAACCTC+TGG | + | chr4.3:76439126-76439145 | None:intergenic | 40.0% | |
| ! | GTGAAGCATATTGTGTTGGT+TGG | - | chr4.3:76440079-76440098 | MS.gene066716:intron | 40.0% |
| ! | TTTTTCTGTAGGCTGTGTTC+AGG | + | chr4.3:76438470-76438489 | None:intergenic | 40.0% |
| !! | ATTCTCCCTTGGTGTCAATT+TGG | + | chr4.3:76437775-76437794 | None:intergenic | 40.0% |
| !! | ATTGTGTTGGTTGGGTCTAT+GGG | - | chr4.3:76440088-76440107 | MS.gene066716:intron | 40.0% |
| !! | CGAGTAATGGATAGAAAGCA+TGG | + | chr4.3:76439493-76439512 | None:intergenic | 40.0% |
| !! | CTTCATTGTTGATTCAGACC+TGG | - | chr4.3:76441200-76441219 | MS.gene066716:intron | 40.0% |
| !! | TATTGTGTTGGTTGGGTCTA+TGG | - | chr4.3:76440087-76440106 | MS.gene066716:intron | 40.0% |
| !! | TGATAAAGAAGGAGGTGTTC+GGG | - | chr4.3:76441232-76441251 | MS.gene066716:intron | 40.0% |
| !! | TTCTCCCTTGGTGTCAATTT+GGG | + | chr4.3:76437774-76437793 | None:intergenic | 40.0% |
| AAAAACATTCCGAATGGGGG+TGG | + | chr4.3:76439637-76439656 | None:intergenic | 45.0% | |
| AAAACATTCCGAATGGGGGT+GGG | + | chr4.3:76439636-76439655 | None:intergenic | 45.0% | |
| ACTTCTGCTACATCAGCTCT+AGG | + | chr4.3:76441311-76441330 | None:intergenic | 45.0% | |
| ATAGGAACTAGATGCTGGCA+GGG | + | chr4.3:76438532-76438551 | None:intergenic | 45.0% | |
| ATAGGGAGAGGGAACAGATT+TGG | - | chr4.3:76438496-76438515 | MS.gene066716:intron | 45.0% | |
| CAAACCACTGTCCTTGTTAC+CGG | - | chr4.3:76437443-76437462 | MS.gene066716:CDS | 45.0% | |
| CACGCGAATAATTGCGATAG+AGG | + | chr4.3:76439873-76439892 | None:intergenic | 45.0% | |
| CGTGTAAGGAACACCAGAAT+TGG | + | chr4.3:76440379-76440398 | None:intergenic | 45.0% | |
| CTATAAACAGCTAAGGCTGC+AGG | - | chr4.3:76440055-76440074 | MS.gene066716:intron | 45.0% | |
| CTGCTCATGAATCTCTACGT+GGG | - | chr4.3:76441645-76441664 | MS.gene066716:intron | 45.0% | |
| CTGTCCCACAAATGAAACCT+GGG | - | chr4.3:76439261-76439280 | MS.gene066716:intron | 45.0% | |
| GACCTAGCATCAAAACCTGA+GGG | - | chr4.3:76442179-76442198 | MS.gene066716:intron | 45.0% | |
| GCAAGTGCTCGAGTGAATTA+TGG | - | chr4.3:76441428-76441447 | MS.gene066716:intron | 45.0% | |
| GCATCTGTACCTTGAATTGC+AGG | + | chr4.3:76439221-76439240 | None:intergenic | 45.0% | |
| TATAGGAACTAGATGCTGGC+AGG | + | chr4.3:76438533-76438552 | None:intergenic | 45.0% | |
| TCCACCCAAATTGACACCAA+GGG | - | chr4.3:76437767-76437786 | MS.gene066716:intron | 45.0% | |
| TCGGGAACTCATTGTAGGAA+AGG | - | chr4.3:76441250-76441269 | MS.gene066716:intron | 45.0% | |
| TCTGCTCATGAATCTCTACG+TGG | - | chr4.3:76441644-76441663 | MS.gene066716:intron | 45.0% | |
| TCTTGAATCTCTTGATGCCG+CGG | - | chr4.3:76437969-76437988 | MS.gene066716:intron | 45.0% | |
| TCTTTATCAAGCAAGCCACC+AGG | + | chr4.3:76441221-76441240 | None:intergenic | 45.0% | |
| TGACCTAGCATCAAAACCTG+AGG | - | chr4.3:76442178-76442197 | MS.gene066716:intron | 45.0% | |
| TGATGGTTCATATCCCGAAC+AGG | - | chr4.3:76439325-76439344 | MS.gene066716:CDS | 45.0% | |
| TGTAGTGCTGCGGAATATAG+AGG | - | chr4.3:76440849-76440868 | MS.gene066716:intron | 45.0% | |
| TTAAACCCACTTGGTTGGCA+TGG | + | chr4.3:76437850-76437869 | None:intergenic | 45.0% | |
| TTGATCCAACCAAAGGTGGA+AGG | - | chr4.3:76439285-76439304 | MS.gene066716:CDS | 45.0% | |
| ! | GGCTTGCTTGATAAAGAAGG+AGG | - | chr4.3:76441224-76441243 | MS.gene066716:intron | 45.0% |
| ! | GTGTTATTGGCCGTGTAACT+AGG | + | chr4.3:76438190-76438209 | None:intergenic | 45.0% |
| ! | TGTTTTCACGGTCCCAAACT+CGG | - | chr4.3:76440465-76440484 | MS.gene066716:CDS | 45.0% |
| ! | TTTTGACCTGTGCAATGCAC+AGG | + | chr4.3:76440503-76440522 | None:intergenic | 45.0% |
| !! | CATTGTTGATTCAGACCTGG+TGG | - | chr4.3:76441203-76441222 | MS.gene066716:intron | 45.0% |
| !! | GGTGGCTTGCTTGATAAAGA+AGG | - | chr4.3:76441221-76441240 | MS.gene066716:intron | 45.0% |
| AAACTCAGGCCTTCCACCTT+TGG | + | chr4.3:76439297-76439316 | None:intergenic | 50.0% | |
| CAAACGCCGTGTACGAGTAA+TGG | + | chr4.3:76439506-76439525 | None:intergenic | 50.0% | |
| CATTACTCGTACACGGCGTT+TGG | - | chr4.3:76439504-76439523 | MS.gene066716:intron | 50.0% | |
| CCTGGGTTTGATCCAACCAA+AGG | - | chr4.3:76439278-76439297 | MS.gene066716:intron | 50.0% | |
| CCTTTGGTTGGATCAAACCC+AGG | + | chr4.3:76439281-76439300 | None:intergenic | 50.0% | |
| CGCGACCAATATATTGCCAG+AGG | - | chr4.3:76439107-76439126 | MS.gene066716:intron | 50.0% | |
| GCTGTCCCACAAATGAAACC+TGG | - | chr4.3:76439260-76439279 | MS.gene066716:intron | 50.0% | |
| GGAGAGGGAACAGATTTGGA+GGG | - | chr4.3:76438500-76438519 | MS.gene066716:intron | 50.0% | |
| GGCATAGGAACATTACGAGC+AGG | + | chr4.3:76441815-76441834 | None:intergenic | 50.0% | |
| GGGAAGATGGAAAGCAAGCT+AGG | + | chr4.3:76439852-76439871 | None:intergenic | 50.0% | |
| GGGTTTGATCCAACCAAAGG+TGG | - | chr4.3:76439281-76439300 | MS.gene066716:intron | 50.0% | |
| GGTGTTCGGGAACTCATTGT+AGG | - | chr4.3:76441245-76441264 | MS.gene066716:intron | 50.0% | |
| GTCCACCCAAATTGACACCA+AGG | - | chr4.3:76437766-76437785 | MS.gene066716:intron | 50.0% | |
| TAGGTGGTCTGTCCGAGTTT+GGG | + | chr4.3:76440480-76440499 | None:intergenic | 50.0% | |
| TCGCATTGCAGCAGCATCAA+CGG | + | chr4.3:76438012-76438031 | None:intergenic | 50.0% | |
| TGGCAGGGTGCATTAAGCTT+AGG | + | chr4.3:76441697-76441716 | None:intergenic | 50.0% | |
| TGTAGCAGAAGTCTGCGTTC+AGG | - | chr4.3:76441319-76441338 | MS.gene066716:intron | 50.0% | |
| ! | TCTCTGGTTCGATTCTCCCT+TGG | + | chr4.3:76437786-76437805 | None:intergenic | 50.0% |
| !! | CACCCTCAGGTTTTGATGCT+AGG | + | chr4.3:76442184-76442203 | None:intergenic | 50.0% |
| !! | CATTGGTTTGGGACCTCAGA+GGG | + | chr4.3:76437824-76437843 | None:intergenic | 50.0% |
| !! | TCCCTTGGTGTCAATTTGGG+TGG | + | chr4.3:76437771-76437790 | None:intergenic | 50.0% |
| !! | TGGCATGGTGGCATTGGTTT+GGG | + | chr4.3:76437835-76437854 | None:intergenic | 50.0% |
| !! | TTGGCATGGTGGCATTGGTT+TGG | + | chr4.3:76437836-76437855 | None:intergenic | 50.0% |
| AACCCACTTGGTTGGCATGG+TGG | + | chr4.3:76437847-76437866 | None:intergenic | 55.0% | |
| ACTGTCCTTGTTACCGGTGC+TGG | - | chr4.3:76437449-76437468 | MS.gene066716:CDS | 55.0% | |
| ATGCCACCATGCCAACCAAG+TGG | - | chr4.3:76437841-76437860 | MS.gene066716:intron | 55.0% | |
| CACCTACCTGTGCATTGCAC+AGG | - | chr4.3:76440494-76440513 | MS.gene066716:CDS | 55.0% | |
| CTGTGCAATGCACAGGTAGG+TGG | + | chr4.3:76440496-76440515 | None:intergenic | 55.0% | |
| CTTGGATTCCCACCCCCATT+CGG | - | chr4.3:76439625-76439644 | MS.gene066716:intron | 55.0% | |
| CTTGGTTGGCATGGTGGCAT+TGG | + | chr4.3:76437841-76437860 | None:intergenic | 55.0% | |
| GACCTGTGCAATGCACAGGT+AGG | + | chr4.3:76440499-76440518 | None:intergenic | 55.0% | |
| GCGTGAGTCTTCCACCTTGT+TGG | - | chr4.3:76439888-76439907 | MS.gene066716:intron | 55.0% | |
| GGGAGAGGGAACAGATTTGG+AGG | - | chr4.3:76438499-76438518 | MS.gene066716:intron | 55.0% | |
| GGGTGCAGGTGAACCAACAA+AGG | - | chr4.3:76442199-76442218 | MS.gene066716:intron | 55.0% | |
| GTAGGTGGTCTGTCCGAGTT+TGG | + | chr4.3:76440481-76440500 | None:intergenic | 55.0% | |
| TCAGGCCTTCCACCTTTGGT+TGG | + | chr4.3:76439293-76439312 | None:intergenic | 55.0% | |
| TCGAACCAGAGACCTCGAAG+AGG | - | chr4.3:76437794-76437813 | MS.gene066716:intron | 55.0% | |
| TGCCACCATGCCAACCAAGT+GGG | - | chr4.3:76437842-76437861 | MS.gene066716:intron | 55.0% | |
| ! | GCATCAAAACCTGAGGGTGC+AGG | - | chr4.3:76442185-76442204 | MS.gene066716:intron | 55.0% |
| !! | AGCACCGGTAACAAGGACAG+TGG | + | chr4.3:76437450-76437469 | None:intergenic | 55.0% |
| !! | GCATTGGTTTGGGACCTCAG+AGG | + | chr4.3:76437825-76437844 | None:intergenic | 55.0% |
| !! | GTGTTGGTTGGGTCTATGGG+TGG | - | chr4.3:76440091-76440110 | MS.gene066716:intron | 55.0% |
| GTGCTCCTCTTCGAGGTCTC+TGG | + | chr4.3:76437802-76437821 | None:intergenic | 60.0% | |
| ! | GTCCTTGTTACCGGTGCTGG+TGG | - | chr4.3:76437452-76437471 | MS.gene066716:CDS | 60.0% |
| ! | GTTGGTTCACCTGCACCCTC+AGG | + | chr4.3:76442197-76442216 | None:intergenic | 60.0% |
| !! | GACCACCAGCACCGGTAACA+AGG | + | chr4.3:76437457-76437476 | None:intergenic | 60.0% |
| !! | TCAGAGGGTGCTCCTCTTCG+AGG | + | chr4.3:76437809-76437828 | None:intergenic | 60.0% |
| !! | TCGAAGAGGAGCACCCTCTG+AGG | - | chr4.3:76437808-76437827 | MS.gene066716:intron | 60.0% |
| ACCTGTGCGACCACCAGCAC+CGG | + | chr4.3:76437465-76437484 | None:intergenic | 65.0% | |
| AGAGTTCGCGGCCGTTGCCA+TGG | + | chr4.3:76438071-76438090 | None:intergenic | 65.0% | |
| !! | ACCGGTGCTGGTGGTCGCAC+AGG | - | chr4.3:76437461-76437480 | MS.gene066716:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 76437428 | 76442262 | 76437428 | ID=MS.gene066716 |
| chr4.3 | mRNA | 76437428 | 76442262 | 76437428 | ID=MS.gene066716.t1;Parent=MS.gene066716 |
| chr4.3 | exon | 76442208 | 76442262 | 76442208 | ID=MS.gene066716.t1.exon1;Parent=MS.gene066716.t1 |
| chr4.3 | CDS | 76442208 | 76442262 | 76442208 | ID=cds.MS.gene066716.t1;Parent=MS.gene066716.t1 |
| chr4.3 | exon | 76440344 | 76440615 | 76440344 | ID=MS.gene066716.t1.exon2;Parent=MS.gene066716.t1 |
| chr4.3 | CDS | 76440344 | 76440615 | 76440344 | ID=cds.MS.gene066716.t1;Parent=MS.gene066716.t1 |
| chr4.3 | exon | 76440209 | 76440245 | 76440209 | ID=MS.gene066716.t1.exon3;Parent=MS.gene066716.t1 |
| chr4.3 | CDS | 76440209 | 76440245 | 76440209 | ID=cds.MS.gene066716.t1;Parent=MS.gene066716.t1 |
| chr4.3 | exon | 76439528 | 76439625 | 76439528 | ID=MS.gene066716.t1.exon4;Parent=MS.gene066716.t1 |
| chr4.3 | CDS | 76439528 | 76439625 | 76439528 | ID=cds.MS.gene066716.t1;Parent=MS.gene066716.t1 |
| chr4.3 | exon | 76439284 | 76439345 | 76439284 | ID=MS.gene066716.t1.exon5;Parent=MS.gene066716.t1 |
| chr4.3 | CDS | 76439284 | 76439345 | 76439284 | ID=cds.MS.gene066716.t1;Parent=MS.gene066716.t1 |
| chr4.3 | exon | 76438350 | 76438473 | 76438350 | ID=MS.gene066716.t1.exon6;Parent=MS.gene066716.t1 |
| chr4.3 | CDS | 76438350 | 76438473 | 76438350 | ID=cds.MS.gene066716.t1;Parent=MS.gene066716.t1 |
| chr4.3 | exon | 76437428 | 76437547 | 76437428 | ID=MS.gene066716.t1.exon7;Parent=MS.gene066716.t1 |
| chr4.3 | CDS | 76437428 | 76437547 | 76437428 | ID=cds.MS.gene066716.t1;Parent=MS.gene066716.t1 |
| Gene Sequence |
| Protein sequence |
