AlfalfaGEDB | MS.gene08499

M. sativa cultivar XinJiangDaYe / MS.gene08499

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF02362.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08499.t1	XP_024628015.1	92.1	354	20	4	81	427	165	517	5.70E-150	540.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08499.t1	Q6EU30	66.5	164	48	4	83	244	91	249	2.9e-54	214.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08499.t1	A0A072TYC0	92.1	354	20	4	81	427	165	517	4.1e-150	540.8

TFs/TRs:

Gene ID	Type	Classification
MS.gene08499.t1	TF	B3

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049356	MS.gene08499	0.800759	1.24E-48	-1.69E-46
MS.gene049378	MS.gene08499	0.801965	7.02E-49	-1.69E-46
MS.gene050397	MS.gene08499	0.811658	6.27E-51	-1.69E-46
MS.gene050400	MS.gene08499	0.802056	6.72E-49	-1.69E-46
MS.gene050426	MS.gene08499	-0.856271	3.60E-62	-1.69E-46
MS.gene050623	MS.gene08499	-0.805019	1.63E-49	-1.69E-46
MS.gene050642	MS.gene08499	0.80177	7.70E-49	-1.69E-46
MS.gene050670	MS.gene08499	0.846407	2.21E-59	-1.69E-46
MS.gene050971	MS.gene08499	0.940954	9.62E-101	-1.69E-46
MS.gene051521	MS.gene08499	0.813118	3.01E-51	-1.69E-46
MS.gene051525	MS.gene08499	0.838064	3.59E-57	-1.69E-46
MS.gene051860	MS.gene08499	0.838814	2.30E-57	-1.69E-46
MS.gene051983	MS.gene08499	0.828616	8.14E-55	-1.69E-46
MS.gene052011	MS.gene08499	-0.868148	8.10E-66	-1.69E-46
MS.gene052077	MS.gene08499	0.859346	4.41E-63	-1.69E-46
MS.gene052128	MS.gene08499	-0.823311	1.48E-53	-1.69E-46
MS.gene052188	MS.gene08499	0.837103	6.33E-57	-1.69E-46
MS.gene052253	MS.gene08499	0.8403	9.45E-58	-1.69E-46
MS.gene052340	MS.gene08499	0.811712	6.10E-51	-1.69E-46
MS.gene052414	MS.gene08499	0.801957	7.05E-49	-1.69E-46
MS.gene052485	MS.gene08499	0.801486	8.80E-49	-1.69E-46
MS.gene053169	MS.gene08499	0.822611	2.16E-53	-1.69E-46
MS.gene05316	MS.gene08499	0.835754	1.40E-56	-1.69E-46
MS.gene053758	MS.gene08499	0.844918	5.61E-59	-1.69E-46
MS.gene053836	MS.gene08499	0.801523	8.65E-49	-1.69E-46
MS.gene053928	MS.gene08499	0.81098	8.80E-51	-1.69E-46
MS.gene054010	MS.gene08499	0.829615	4.66E-55	-1.69E-46
MS.gene054011	MS.gene08499	0.835686	1.45E-56	-1.69E-46
MS.gene054012	MS.gene08499	0.836829	7.44E-57	-1.69E-46
MS.gene054013	MS.gene08499	0.829919	3.93E-55	-1.69E-46
MS.gene054183	MS.gene08499	0.85497	8.63E-62	-1.69E-46
MS.gene054349	MS.gene08499	0.826458	2.68E-54	-1.69E-46
MS.gene054556	MS.gene08499	0.858939	5.84E-63	-1.69E-46
MS.gene055116	MS.gene08499	0.809693	1.67E-50	-1.69E-46
MS.gene055369	MS.gene08499	0.802672	5.02E-49	-1.69E-46
MS.gene05553	MS.gene08499	0.820063	8.36E-53	-1.69E-46
MS.gene055604	MS.gene08499	0.823228	1.55E-53	-1.69E-46
MS.gene055741	MS.gene08499	0.820625	6.22E-53	-1.69E-46
MS.gene055744	MS.gene08499	0.833137	6.34E-56	-1.69E-46
MS.gene055909	MS.gene08499	0.821257	4.44E-53	-1.69E-46
MS.gene055911	MS.gene08499	0.826983	2.01E-54	-1.69E-46
MS.gene056511	MS.gene08499	0.806468	8.11E-50	-1.69E-46
MS.gene056514	MS.gene08499	0.82181	3.31E-53	-1.69E-46
MS.gene056659	MS.gene08499	0.832346	9.96E-56	-1.69E-46
MS.gene056723	MS.gene08499	0.808898	2.47E-50	-1.69E-46
MS.gene056899	MS.gene08499	-0.818195	2.22E-52	-1.69E-46
MS.gene056902	MS.gene08499	0.805886	1.07E-49	-1.69E-46
MS.gene056979	MS.gene08499	0.835636	1.50E-56	-1.69E-46
MS.gene057396	MS.gene08499	0.834247	3.35E-56	-1.69E-46
MS.gene057476	MS.gene08499	0.800623	1.32E-48	-1.69E-46
MS.gene057609	MS.gene08499	0.80475	1.86E-49	-1.69E-46
MS.gene057610	MS.gene08499	0.821433	4.05E-53	-1.69E-46
MS.gene057749	MS.gene08499	0.813529	2.44E-51	-1.69E-46
MS.gene057823	MS.gene08499	0.817822	2.70E-52	-1.69E-46
MS.gene058007	MS.gene08499	0.830771	2.43E-55	-1.69E-46
MS.gene05811	MS.gene08499	0.810079	1.38E-50	-1.69E-46
MS.gene058376	MS.gene08499	0.827019	1.97E-54	-1.69E-46
MS.gene058700	MS.gene08499	0.80904	2.30E-50	-1.69E-46
MS.gene058710	MS.gene08499	0.813337	2.69E-51	-1.69E-46
MS.gene05886	MS.gene08499	0.803141	4.02E-49	-1.69E-46
MS.gene058928	MS.gene08499	0.829138	6.09E-55	-1.69E-46
MS.gene05907	MS.gene08499	0.839878	1.22E-57	-1.69E-46
MS.gene059082	MS.gene08499	0.813858	2.07E-51	-1.69E-46
MS.gene059285	MS.gene08499	0.808681	2.75E-50	-1.69E-46
MS.gene059294	MS.gene08499	0.854462	1.21E-61	-1.69E-46
MS.gene059366	MS.gene08499	0.806727	7.15E-50	-1.69E-46
MS.gene059420	MS.gene08499	0.871574	6.16E-67	-1.69E-46
MS.gene059462	MS.gene08499	0.811214	7.83E-51	-1.69E-46
MS.gene059674	MS.gene08499	0.806799	6.90E-50	-1.69E-46
MS.gene059807	MS.gene08499	0.835911	1.27E-56	-1.69E-46
MS.gene05984	MS.gene08499	0.835547	1.58E-56	-1.69E-46
MS.gene060403	MS.gene08499	0.802419	5.66E-49	-1.69E-46
MS.gene060837	MS.gene08499	0.80117	1.02E-48	-1.69E-46
MS.gene060986	MS.gene08499	0.817068	3.99E-52	-1.69E-46
MS.gene061049	MS.gene08499	0.800476	1.42E-48	-1.69E-46
MS.gene061154	MS.gene08499	0.864604	1.08E-64	-1.69E-46
MS.gene061159	MS.gene08499	0.806516	7.92E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08499.t1	MTR_8g023990	91.724	435	22	6	1	427	89	517	0.0	764
MS.gene08499.t1	MTR_7g117455	90.741	108	10	0	86	193	116	223	1.69e-65	216
MS.gene08499.t1	MTR_1g058350	70.796	113	29	2	83	193	71	181	2.21e-48	168
MS.gene08499.t1	MTR_5g053920	66.393	122	31	2	84	197	191	310	2.69e-48	169
MS.gene08499.t1	MTR_7g105370	73.333	105	25	2	92	196	65	166	2.56e-46	162
MS.gene08499.t1	MTR_1g093600	62.602	123	31	2	84	193	188	308	3.21e-43	156
MS.gene08499.t1	MTR_1g116920	52.427	103	43	2	73	175	150	246	4.60e-28	112
MS.gene08499.t1	MTR_4g028130	36.134	119	68	4	87	203	314	426	1.76e-15	79.3
MS.gene08499.t1	MTR_4g028130	36.134	119	68	4	87	203	314	426	2.81e-15	78.6
MS.gene08499.t1	MTR_4g028130	37.273	110	61	4	87	194	314	417	5.91e-15	77.8
MS.gene08499.t1	MTR_2g011940	38.182	110	60	4	87	194	343	446	1.83e-14	76.3
MS.gene08499.t1	MTR_2g011940	38.182	110	60	4	87	194	352	455	2.78e-14	75.5
MS.gene08499.t1	MTR_2g011940	38.182	110	60	4	87	194	352	455	3.32e-14	75.1
MS.gene08499.t1	MTR_7g073240	40.000	110	56	5	87	193	121	223	4.82e-14	73.6
MS.gene08499.t1	MTR_5g075410	39.560	91	50	3	87	175	321	408	7.10e-14	74.3
MS.gene08499.t1	MTR_3g467380	39.560	91	50	3	87	175	338	425	2.66e-13	72.4
MS.gene08499.t1	MTR_4g088210	40.206	97	56	2	86	180	146	242	3.34e-12	68.9
MS.gene08499.t1	MTR_2g014770	35.897	117	73	2	66	180	136	252	3.44e-12	68.9
MS.gene08499.t1	MTR_2g014770	35.897	117	73	2	66	180	136	252	3.52e-12	68.6
MS.gene08499.t1	MTR_4g088210	40.206	97	56	2	86	180	146	242	3.81e-12	68.6
MS.gene08499.t1	MTR_2g094570	37.624	101	61	2	83	181	103	203	2.08e-11	66.2
MS.gene08499.t1	MTR_2g094570	37.624	101	61	2	83	181	103	203	2.09e-11	66.2
MS.gene08499.t1	MTR_3g073420	31.618	136	80	3	57	191	94	217	2.30e-11	66.2
MS.gene08499.t1	MTR_2g094570	37.624	101	61	2	83	181	159	259	2.47e-11	66.2
MS.gene08499.t1	MTR_4g058930	39.000	100	59	2	83	180	104	203	9.07e-11	64.3
MS.gene08499.t1	MTR_4g058930	39.000	100	59	2	83	180	104	203	9.80e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08499.t1	AT2G46870	46.452	310	94	10	70	370	9	255	1.03e-75	238
MS.gene08499.t1	AT1G01030	45.779	308	104	9	83	378	51	307	8.53e-68	219
MS.gene08499.t1	AT3G61970	45.364	302	84	11	68	366	3	226	2.35e-66	214
MS.gene08499.t1	AT1G01030	85.586	111	15	1	83	192	51	161	8.62e-63	206
MS.gene08499.t1	AT4G01500	60.645	155	46	3	80	221	28	180	1.26e-52	179
MS.gene08499.t1	AT3G11580	66.116	121	28	2	83	192	24	142	2.70e-49	167
MS.gene08499.t1	AT3G11580	66.116	121	28	2	83	192	24	142	2.70e-49	167
MS.gene08499.t1	AT3G11580	66.116	121	28	2	83	192	24	142	2.70e-49	167
MS.gene08499.t1	AT3G11580	66.116	121	28	2	83	192	24	142	7.16e-49	167
MS.gene08499.t1	AT1G68840	70.536	112	29	2	84	193	184	293	5.45e-48	167
MS.gene08499.t1	AT1G68840	70.536	112	29	2	84	193	184	293	5.45e-48	167
MS.gene08499.t1	AT5G06250	59.559	136	43	2	84	209	42	175	7.47e-48	165
MS.gene08499.t1	AT3G11580	64.516	124	31	2	80	192	21	142	7.88e-48	168
MS.gene08499.t1	AT5G06250	67.227	119	27	2	84	192	42	158	1.24e-47	165
MS.gene08499.t1	AT5G06250	67.227	119	27	2	84	192	42	158	1.35e-47	165
MS.gene08499.t1	AT5G06250	59.559	136	43	2	84	209	42	175	2.86e-47	163
MS.gene08499.t1	AT5G06250	59.559	136	43	2	84	209	42	175	3.01e-47	163
MS.gene08499.t1	AT1G13260	70.909	110	29	2	85	193	185	292	4.54e-46	162
MS.gene08499.t1	AT2G36080	68.696	115	31	2	81	192	31	143	4.81e-46	157
MS.gene08499.t1	AT2G36080	68.696	115	31	2	81	192	31	143	4.81e-46	157
MS.gene08499.t1	AT2G36080	68.696	115	31	2	81	192	31	143	5.71e-46	159
MS.gene08499.t1	AT2G36080	68.696	115	31	2	81	192	31	143	7.05e-46	159
MS.gene08499.t1	AT1G25560	63.025	119	34	2	84	194	191	307	1.24e-44	159
MS.gene08499.t1	AT3G25730	66.071	112	33	2	85	193	180	289	4.48e-43	154
MS.gene08499.t1	AT1G50680	43.220	118	56	2	67	173	136	253	2.09e-25	106
MS.gene08499.t1	AT1G51120	48.958	96	41	1	86	173	176	271	2.09e-23	100
MS.gene08499.t1	AT4G32010	38.182	110	60	4	87	194	285	388	2.06e-15	79.0
MS.gene08499.t1	AT4G32010	38.182	110	60	4	87	194	281	384	2.21e-15	79.0
MS.gene08499.t1	AT2G30470	39.560	91	50	3	87	175	294	381	3.57e-14	75.1
MS.gene08499.t1	AT1G35240	35.329	167	86	7	48	206	87	239	4.52e-13	71.6
MS.gene08499.t1	AT1G35520	39.669	121	64	5	88	206	126	239	2.40e-12	69.3
MS.gene08499.t1	AT1G34310	38.843	121	65	5	88	206	126	239	5.66e-12	68.2
MS.gene08499.t1	AT2G33860	30.323	155	99	3	23	176	102	248	7.63e-12	67.8
MS.gene08499.t1	AT1G77850	34.862	109	66	2	84	191	115	219	2.35e-11	66.2
MS.gene08499.t1	AT1G77850	34.862	109	66	2	84	191	115	219	2.36e-11	66.2
MS.gene08499.t1	AT1G35540	38.843	121	65	5	88	206	126	239	2.49e-11	66.2
MS.gene08499.t1	AT1G34410	38.017	121	66	5	88	206	126	239	2.92e-11	65.9
MS.gene08499.t1	AT5G60450	29.801	151	97	2	33	182	106	248	3.51e-11	65.9
MS.gene08499.t1	AT5G60450	29.801	151	97	2	33	182	130	272	3.79e-11	65.9
MS.gene08499.t1	AT2G33860	39.560	91	54	1	87	176	1	91	7.16e-11	64.3

Find 70 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGATTTAGATACTCTTAT+TGG	0.204888	8.2:+71964335	MS.gene08499:CDS
ATGTTTCCATTTCATCAATA+TGG	0.246411	8.2:+71964709	MS.gene08499:CDS
TTTAAAGCAAATAGATTTCA+TGG	0.253920	8.2:+71964042	MS.gene08499:CDS
ATAGAATACTGTTGTTGATT+AGG	0.290899	8.2:-71964565	None:intergenic
GCAGCATCTAAAGGAGGATT+AGG	0.296328	8.2:+71963968	MS.gene08499:CDS
AACAACAGTATTCTATTAGA+TGG	0.305403	8.2:+71964572	MS.gene08499:CDS
GGCATAGGTTGTTTATAGAT+TGG	0.332546	8.2:+71964470	MS.gene08499:CDS
CTACTAATGGTGCTGCAAAA+AGG	0.355470	8.2:+71964965	MS.gene08499:CDS
GCTGCTGAATTGTGAGATTC+TGG	0.358440	8.2:-71963950	None:intergenic
CCACCACCATATTGATGAAA+TGG	0.378629	8.2:-71964715	None:intergenic
AAAATTCATCTGATTGTGTA+AGG	0.380849	8.2:-71964677	None:intergenic
TGCTGATGTTGTAACCTTTG+TGG	0.393602	8.2:-71964637	None:intergenic
TGTTCTTGTTGTTGTGGAAC+AGG	0.398968	8.2:-71964118	None:intergenic
CAACAAGAAGGAGGAGGAGG+AGG	0.405771	8.2:+71964850	MS.gene08499:CDS
CAAAGCTATGTTATGACAAA+AGG	0.424983	8.2:+71964367	MS.gene08499:CDS
GCGGCGTCGGCGAATTGTTT+AGG	0.427168	8.2:+71964449	MS.gene08499:CDS
CTTTAAATTTGTGAAATTTG+AGG	0.440342	8.2:-71964026	None:intergenic
TGTTGTAACCTTTGTGGTGT+TGG	0.444187	8.2:-71964631	None:intergenic
TTCAACAAGTGATGATAACT+TGG	0.444286	8.2:+71965029	MS.gene08499:CDS
GCTACTACTAGTACTACTAA+TGG	0.446131	8.2:+71964952	MS.gene08499:CDS
TGTTGGGAAACTAAACCGTT+TGG	0.462142	8.2:+71964213	MS.gene08499:CDS
TGATGATGATAATGAGAAAC+AGG	0.463873	8.2:-71964907	None:intergenic
TCATTTGATGTTGAATCAAG+TGG	0.470685	8.2:-71964268	None:intergenic
ACCATCACTTCAACATTTGA+AGG	0.471635	8.2:+71965071	MS.gene08499:CDS
ATAGGTTGTTTATAGATTGG+AGG	0.472973	8.2:+71964473	MS.gene08499:CDS
AACCTTTGTGGTGTTGGATA+AGG	0.473019	8.2:-71964625	None:intergenic
GTTGTAACACCAAGTGATGT+TGG	0.474361	8.2:+71964196	MS.gene08499:CDS
ACAACAGTATTCTATTAGAT+GGG	0.483028	8.2:+71964573	MS.gene08499:CDS
CATTACTAGTTAAATTTCCA+TGG	0.483330	8.2:-71964930	None:intergenic
TTGCATCTTGATGTTGGTGA+TGG	0.485306	8.2:-71964000	None:intergenic
CAGCATCTAAAGGAGGATTA+GGG	0.488321	8.2:+71963969	MS.gene08499:CDS
CAGCAACAAGAAGGAGGAGG+AGG	0.488402	8.2:+71964847	MS.gene08499:CDS
AAGATAGAAATGGAAAATTG+TGG	0.489600	8.2:+71964314	MS.gene08499:CDS
TTGTAACACCAAGTGATGTT+GGG	0.490137	8.2:+71964197	MS.gene08499:CDS
TCTTGTTGTTCTTGTTGTTG+TGG	0.492978	8.2:-71964124	None:intergenic
TCGGCGAATTGTTTAGGCAT+AGG	0.495937	8.2:+71964455	MS.gene08499:CDS
TGTTGATTAGGAAGAAAGAA+AGG	0.497211	8.2:-71964553	None:intergenic
CACAATTCAGCAGCATCTAA+AGG	0.501419	8.2:+71963959	MS.gene08499:CDS
CTTCCTTGAGGCATTGATGA+TGG	0.504465	8.2:-71964811	None:intergenic
CCATTTCATCAATATGGTGG+TGG	0.507266	8.2:+71964715	MS.gene08499:CDS
AATTCATCTGATTGTGTAAG+GGG	0.516476	8.2:-71964675	None:intergenic
GTTGATGTTTCTTCATGATG+AGG	0.536446	8.2:-71965096	None:intergenic
AAGGTTGTTTGGTGTGAACA+TGG	0.542303	8.2:+71964990	MS.gene08499:CDS
GCTATGTTATGACAAAAGGT+TGG	0.544721	8.2:+71964371	MS.gene08499:CDS
TTTAGTTTCCCAACATCACT+TGG	0.546847	8.2:-71964205	None:intergenic
GATTCAACATCAAATGAGAA+AGG	0.548994	8.2:+71964274	MS.gene08499:CDS
AACATCAACAAGATTTGAAG+AGG	0.552072	8.2:+71965110	MS.gene08499:CDS
AAATTCATCTGATTGTGTAA+GGG	0.552187	8.2:-71964676	None:intergenic
AGTGATGGTACTATTGAAGA+AGG	0.553751	8.2:-71965057	None:intergenic
ACCTTCAAATGTTGAAGTGA+TGG	0.554721	8.2:-71965072	None:intergenic
TTTCCATTTCATCAATATGG+TGG	0.556128	8.2:+71964712	MS.gene08499:CDS
TTTGGTGTGAACATGGAGTG+TGG	0.563933	8.2:+71964997	MS.gene08499:CDS
GTGAAAAGTGTTGCTGATGA+AGG	0.570944	8.2:-71964529	None:intergenic
GTTTCATTTCAACGCGGCGT+CGG	0.571504	8.2:+71964436	MS.gene08499:CDS
AGGTTGTTGCATCTTGATGT+TGG	0.573287	8.2:-71964006	None:intergenic
TGAGGCATTGATGATGGTGC+TGG	0.585946	8.2:-71964805	None:intergenic
CAGTATTCTATTAGATGGGG+AGG	0.595711	8.2:+71964577	MS.gene08499:CDS
AGTACAAGACAGCAACAAGA+AGG	0.600583	8.2:+71964838	MS.gene08499:CDS
AGACAGCAACAAGAAGGAGG+AGG	0.619946	8.2:+71964844	MS.gene08499:CDS
GATTTCATGGAATTGTCACT+AGG	0.623329	8.2:+71964055	MS.gene08499:CDS
TTCCTTATCCAACACCACAA+AGG	0.633231	8.2:+71964623	MS.gene08499:CDS
ACAAGACAGCAACAAGAAGG+AGG	0.633565	8.2:+71964841	MS.gene08499:CDS
CAACAGTATTCTATTAGATG+GGG	0.645453	8.2:+71964574	MS.gene08499:CDS
GCACCATCATCAATGCCTCA+AGG	0.646120	8.2:+71964808	MS.gene08499:CDS
TCTCATTATCATCATCACCA+TGG	0.646213	8.2:+71964913	MS.gene08499:CDS
CTTGTACTCAAGCTTCCTTG+AGG	0.650771	8.2:-71964823	None:intergenic
TCTTGTTGTTGTGGAACAGG+AGG	0.666596	8.2:-71964115	None:intergenic
GGTGTGAACATGGAGTGTGG+TGG	0.666596	8.2:+71965000	MS.gene08499:CDS
AATTCAGCAGCATCTAAAGG+AGG	0.671535	8.2:+71963962	MS.gene08499:CDS
GACATTGTTTCATTTCAACG+CGG	0.724243	8.2:+71964430	MS.gene08499:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CTTTAAATTTGTGAAATTTG+AGG	-	chr8.2:71964029-71964048	None:intergenic	20.0%
!!!	GTTTTTTCTCTTTAACAAAA+CGG	-	chr8.2:71964399-71964418	None:intergenic	20.0%
!!!	TTTAAAGCAAATAGATTTCA+TGG	+	chr8.2:71964042-71964061	MS.gene08499:CDS	20.0%
!	AAAATTCATCTGATTGTGTA+AGG	-	chr8.2:71964680-71964699	None:intergenic	25.0%
!	AAATTCATCTGATTGTGTAA+GGG	-	chr8.2:71964679-71964698	None:intergenic	25.0%
!	AACAACAGTATTCTATTAGA+TGG	+	chr8.2:71964572-71964591	MS.gene08499:CDS	25.0%
!	AAGATAGAAATGGAAAATTG+TGG	+	chr8.2:71964314-71964333	MS.gene08499:CDS	25.0%
!	ACAACAGTATTCTATTAGAT+GGG	+	chr8.2:71964573-71964592	MS.gene08499:CDS	25.0%
!	ATGTTTCCATTTCATCAATA+TGG	+	chr8.2:71964709-71964728	MS.gene08499:CDS	25.0%
!	CATTACTAGTTAAATTTCCA+TGG	-	chr8.2:71964933-71964952	None:intergenic	25.0%
!	CTCATATAAAAAACTGAACT+TGG	-	chr8.2:71964778-71964797	None:intergenic	25.0%
!!	ATAGAATACTGTTGTTGATT+AGG	-	chr8.2:71964568-71964587	None:intergenic	25.0%
!!!	CTGAATTTTGAAGATAGAAA+TGG	+	chr8.2:71964304-71964323	MS.gene08499:CDS	25.0%
	AAAGAGAAAAAACTTGATGC+TGG	+	chr8.2:71964406-71964425	MS.gene08499:CDS	30.0%
	AACATCAACAAGATTTGAAG+AGG	+	chr8.2:71965110-71965129	MS.gene08499:CDS	30.0%
	AATTCATCTGATTGTGTAAG+GGG	-	chr8.2:71964678-71964697	None:intergenic	30.0%
	ATAGGTTGTTTATAGATTGG+AGG	+	chr8.2:71964473-71964492	MS.gene08499:CDS	30.0%
	CAAAGCTATGTTATGACAAA+AGG	+	chr8.2:71964367-71964386	MS.gene08499:CDS	30.0%
	CAACAGTATTCTATTAGATG+GGG	+	chr8.2:71964574-71964593	MS.gene08499:CDS	30.0%
	GATTCAACATCAAATGAGAA+AGG	+	chr8.2:71964274-71964293	MS.gene08499:CDS	30.0%
	GGAGATTTAGATACTCTTAT+TGG	+	chr8.2:71964335-71964354	MS.gene08499:CDS	30.0%
	TCATTTGATGTTGAATCAAG+TGG	-	chr8.2:71964271-71964290	None:intergenic	30.0%
	TTCAACAAGTGATGATAACT+TGG	+	chr8.2:71965029-71965048	MS.gene08499:CDS	30.0%
	TTTCCATTTCATCAATATGG+TGG	+	chr8.2:71964712-71964731	MS.gene08499:CDS	30.0%
!	CTTTTGTCATAACATAGCTT+TGG	-	chr8.2:71964369-71964388	None:intergenic	30.0%
!	GAAGAAGCTTCAATGATTTT+TGG	+	chr8.2:71965144-71965163	MS.gene08499:CDS	30.0%
!	TGATGATGATAATGAGAAAC+AGG	-	chr8.2:71964910-71964929	None:intergenic	30.0%
!	TGTTGATTAGGAAGAAAGAA+AGG	-	chr8.2:71964556-71964575	None:intergenic	30.0%
!!	TACTTTTCAGCATGTTGTTT+TGG	-	chr8.2:71964244-71964263	None:intergenic	30.0%
!!	TGTTCTTTTTCATGTGTACT+AGG	-	chr8.2:71964163-71964182	None:intergenic	30.0%
!!!	GTTGTTTTGGTATAACCAAA+CGG	-	chr8.2:71964231-71964250	None:intergenic	30.0%
	ACCATCACTTCAACATTTGA+AGG	+	chr8.2:71965071-71965090	MS.gene08499:CDS	35.0%
	ACCTTCAAATGTTGAAGTGA+TGG	-	chr8.2:71965075-71965094	None:intergenic	35.0%
	AGTGATGGTACTATTGAAGA+AGG	-	chr8.2:71965060-71965079	None:intergenic	35.0%
	GACATTGTTTCATTTCAACG+CGG	+	chr8.2:71964430-71964449	MS.gene08499:CDS	35.0%
	GATTTCATGGAATTGTCACT+AGG	+	chr8.2:71964055-71964074	MS.gene08499:CDS	35.0%
	GCAAAAAGGTTAAGGTTGTT+TGG	+	chr8.2:71964979-71964998	MS.gene08499:CDS	35.0%
	GCTACTACTAGTACTACTAA+TGG	+	chr8.2:71964952-71964971	MS.gene08499:CDS	35.0%
	GCTATGTTATGACAAAAGGT+TGG	+	chr8.2:71964371-71964390	MS.gene08499:CDS	35.0%
	GGCATAGGTTGTTTATAGAT+TGG	+	chr8.2:71964470-71964489	MS.gene08499:CDS	35.0%
	GTTGATGTTTCTTCATGATG+AGG	-	chr8.2:71965099-71965118	None:intergenic	35.0%
	TCTCATTATCATCATCACCA+TGG	+	chr8.2:71964913-71964932	MS.gene08499:CDS	35.0%
	TTGTAACACCAAGTGATGTT+GGG	+	chr8.2:71964197-71964216	MS.gene08499:CDS	35.0%
!	TTTAGTTTCCCAACATCACT+TGG	-	chr8.2:71964208-71964227	None:intergenic	35.0%
!!	TCTTGTTGTTCTTGTTGTTG+TGG	-	chr8.2:71964127-71964146	None:intergenic	35.0%
	AATTCAGCAGCATCTAAAGG+AGG	+	chr8.2:71963962-71963981	MS.gene08499:CDS	40.0%
	AGGTTGTTGCATCTTGATGT+TGG	-	chr8.2:71964009-71964028	None:intergenic	40.0%
	AGTACAAGACAGCAACAAGA+AGG	+	chr8.2:71964838-71964857	MS.gene08499:CDS	40.0%
	CACAATTCAGCAGCATCTAA+AGG	+	chr8.2:71963959-71963978	MS.gene08499:CDS	40.0%
	CAGCATCTAAAGGAGGATTA+GGG	+	chr8.2:71963969-71963988	MS.gene08499:CDS	40.0%
	CAGTATTCTATTAGATGGGG+AGG	+	chr8.2:71964577-71964596	MS.gene08499:CDS	40.0%
	CCACCACCATATTGATGAAA+TGG	-	chr8.2:71964718-71964737	None:intergenic	40.0%
	CCATTTCATCAATATGGTGG+TGG	+	chr8.2:71964715-71964734	MS.gene08499:CDS	40.0%
	GTTGTAACACCAAGTGATGT+TGG	+	chr8.2:71964196-71964215	MS.gene08499:CDS	40.0%
	TGCTGATGTTGTAACCTTTG+TGG	-	chr8.2:71964640-71964659	None:intergenic	40.0%
	TGTTGGGAAACTAAACCGTT+TGG	+	chr8.2:71964213-71964232	MS.gene08499:CDS	40.0%
	TGTTGTAACCTTTGTGGTGT+TGG	-	chr8.2:71964634-71964653	None:intergenic	40.0%
	TTCCTTATCCAACACCACAA+AGG	+	chr8.2:71964623-71964642	MS.gene08499:CDS	40.0%
!	AACCTTTGTGGTGTTGGATA+AGG	-	chr8.2:71964628-71964647	None:intergenic	40.0%
!	TTGCATCTTGATGTTGGTGA+TGG	-	chr8.2:71964003-71964022	None:intergenic	40.0%
!!	AAGGTTGTTTGGTGTGAACA+TGG	+	chr8.2:71964990-71965009	MS.gene08499:CDS	40.0%
!!	ATGGTGCTGCAAAAAGGTTA+AGG	+	chr8.2:71964971-71964990	MS.gene08499:CDS	40.0%
!!	CTACTAATGGTGCTGCAAAA+AGG	+	chr8.2:71964965-71964984	MS.gene08499:CDS	40.0%
!!	GTGAAAAGTGTTGCTGATGA+AGG	-	chr8.2:71964532-71964551	None:intergenic	40.0%
!!	TGTTCTTGTTGTTGTGGAAC+AGG	-	chr8.2:71964121-71964140	None:intergenic	40.0%
	ACAAGACAGCAACAAGAAGG+AGG	+	chr8.2:71964841-71964860	MS.gene08499:CDS	45.0%
	CTTGTACTCAAGCTTCCTTG+AGG	-	chr8.2:71964826-71964845	None:intergenic	45.0%
	GCAGCATCTAAAGGAGGATT+AGG	+	chr8.2:71963968-71963987	MS.gene08499:CDS	45.0%
	GCTGCTGAATTGTGAGATTC+TGG	-	chr8.2:71963953-71963972	None:intergenic	45.0%
	TCGGCGAATTGTTTAGGCAT+AGG	+	chr8.2:71964455-71964474	MS.gene08499:CDS	45.0%
!	TTTGGTGTGAACATGGAGTG+TGG	+	chr8.2:71964997-71965016	MS.gene08499:CDS	45.0%
!!	CTTCCTTGAGGCATTGATGA+TGG	-	chr8.2:71964814-71964833	None:intergenic	45.0%
!!	TCTTGTTGTTGTGGAACAGG+AGG	-	chr8.2:71964118-71964137	None:intergenic	45.0%
	AGACAGCAACAAGAAGGAGG+AGG	+	chr8.2:71964844-71964863	MS.gene08499:CDS	50.0%
	GCACCATCATCAATGCCTCA+AGG	+	chr8.2:71964808-71964827	MS.gene08499:CDS	50.0%
	GTTTCATTTCAACGCGGCGT+CGG	+	chr8.2:71964436-71964455	MS.gene08499:CDS	50.0%
!!	TGAGGCATTGATGATGGTGC+TGG	-	chr8.2:71964808-71964827	None:intergenic	50.0%
	CAACAAGAAGGAGGAGGAGG+AGG	+	chr8.2:71964850-71964869	MS.gene08499:CDS	55.0%
	CAGCAACAAGAAGGAGGAGG+AGG	+	chr8.2:71964847-71964866	MS.gene08499:CDS	55.0%
	GGTGTGAACATGGAGTGTGG+TGG	+	chr8.2:71965000-71965019	MS.gene08499:CDS	55.0%
!!	GCGGCGTCGGCGAATTGTTT+AGG	+	chr8.2:71964449-71964468	MS.gene08499:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	71963926	71965209	71963926	ID=MS.gene08499
chr8.2	mRNA	71963926	71965209	71963926	ID=MS.gene08499.t1;Parent=MS.gene08499
chr8.2	exon	71963926	71965209	71963926	ID=MS.gene08499.t1.exon1;Parent=MS.gene08499.t1
chr8.2	CDS	71963926	71965209	71963926	ID=cds.MS.gene08499.t1;Parent=MS.gene08499.t1

Gene Sequence

>MS.gene08499

ATGAATCATCATCATCATCATTCACCAGAATCTCACAATTCAGCAGCATCTAAAGGAGGATTAGGGTTATTACACCATCACCAACATCAAGATGCAACAACCTCAAATTTCACAAATTTAAAGCAAATAGATTTCATGGAATTGTCACTAGGTAACAACAATAACAAAAACAAAGATGTTATTAATGTTCCTCCTGTTCCACAACAACAAGAACAACAAGAACAAGAACAACAACCTAGTACACATGAAAAAGAACACATGTTTGACAAAGTTGTAACACCAAGTGATGTTGGGAAACTAAACCGTTTGGTTATACCAAAACAACATGCTGAAAAGTATTTTCCACTTGATTCAACATCAAATGAGAAAGGTCTTCTTCTGAATTTTGAAGATAGAAATGGAAAATTGTGGAGATTTAGATACTCTTATTGGAACAGTAGCCAAAGCTATGTTATGACAAAAGGTTGGAGCCGTTTTGTTAAAGAGAAAAAACTTGATGCTGGTGACATTGTTTCATTTCAACGCGGCGTCGGCGAATTGTTTAGGCATAGGTTGTTTATAGATTGGAGGAGAAGATCTAATCATAATCATCATAATATTGATCCTTCATCAGCAACACTTTTCACTCCTTTCTTTCTTCCTAATCAACAACAGTATTCTATTAGATGGGGAGGTGCTAATAGTAGATTTTACTCTCTTCCTTATCCAACACCACAAAGGTTACAACATCAGCAACAAAATCATCATGACCCCTTACACAATCAGATGAATTTTAATCATAACATGTTTCCATTTCATCAATATGGTGGTGGAAATGTGAATCATCAATACAATTTTCATCATCATGATCCAAGTTCAGTTTTTTATATGAGATCATTACCAGCACCATCATCAATGCCTCAAGGAAGCTTGAGTACAAGACAGCAACAAGAAGGAGGAGGAGGAGGAAGCAATGTCTCAAACATGATTATTGATTCTGTTCCTGTTTCTCATTATCATCATCACCATGGAAATTTAACTAGTAATGCTACTACTAGTACTACTAATGGTGCTGCAAAAAGGTTAAGGTTGTTTGGTGTGAACATGGAGTGTGGTGGTTCTTCTTCAACAAGTGATGATAACTTGGCTTCTCCTTCTTCAATAGTACCATCACTTCAACATTTGAAGGTACCTCATCATGAAGAAACATCAACAAGATTTGAAGAGGATAAGAGAAGAGAAGAAGCTTCAATGATTTTTGGTTTAGATACTTCTTTGCAATATCATAATTACCAACAACAATGA

Protein sequence

>MS.gene08499.t1

MNHHHHHSPESHNSAASKGGLGLLHHHQHQDATTSNFTNLKQIDFMELSLGNNNNKNKDVINVPPVPQQQEQQEQEQQPSTHEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELFRHRLFIDWRRRSNHNHHNIDPSSATLFTPFFLPNQQQYSIRWGGANSRFYSLPYPTPQRLQHQQQNHHDPLHNQMNFNHNMFPFHQYGGGNVNHQYNFHHHDPSSVFYMRSLPAPSSMPQGSLSTRQQQEGGGGGSNVSNMIIDSVPVSHYHHHHGNLTSNATTSTTNGAAKRLRLFGVNMECGGSSSTSDDNLASPSSIVPSLQHLKVPHHEETSTRFEEDKRREEASMIFGLDTSLQYHNYQQQ