Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21676.t1 | XP_003610972.1 | 99.4 | 481 | 3 | 0 | 1 | 481 | 1 | 481 | 3.00E-264 | 920.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21676.t1 | Q9LPR8 | 65.3 | 487 | 158 | 7 | 1 | 481 | 1 | 482 | 2.0e-176 | 620.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21676.t1 | G7K9A5 | 99.4 | 481 | 3 | 0 | 1 | 481 | 1 | 481 | 2.1e-264 | 920.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene21676.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene21676 | 0.840466 | 8.55E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene21676 | 0.821826 | 3.28E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene21676 | 0.809124 | 2.21E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene21676 | 0.83091 | 2.25E-55 | -1.69E-46 |
| MS.gene049452 | MS.gene21676 | 0.824928 | 6.19E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene21676 | 0.834249 | 3.34E-56 | -1.69E-46 |
| MS.gene050605 | MS.gene21676 | 0.874879 | 4.78E-68 | -1.69E-46 |
| MS.gene050680 | MS.gene21676 | 0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene21676 | 0.822471 | 2.33E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene21676 | 0.830559 | 2.74E-55 | -1.69E-46 |
| MS.gene050953 | MS.gene21676 | 0.808324 | 3.28E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene21676 | 0.820283 | 7.45E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene21676 | 0.835952 | 1.24E-56 | -1.69E-46 |
| MS.gene051368 | MS.gene21676 | 0.817778 | 2.76E-52 | -1.69E-46 |
| MS.gene051924 | MS.gene21676 | -0.802868 | 4.57E-49 | -1.69E-46 |
| MS.gene051926 | MS.gene21676 | -0.806357 | 8.56E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene21676 | 0.807904 | 4.02E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene21676 | 0.828506 | 8.66E-55 | -1.69E-46 |
| MS.gene052323 | MS.gene21676 | 0.801059 | 1.08E-48 | -1.69E-46 |
| MS.gene052333 | MS.gene21676 | 0.849136 | 3.93E-60 | -1.69E-46 |
| MS.gene052426 | MS.gene21676 | 0.804127 | 2.51E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene21676 | 0.80242 | 5.66E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene21676 | 0.808542 | 2.94E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene21676 | 0.800097 | 1.69E-48 | -1.69E-46 |
| MS.gene052863 | MS.gene21676 | 0.801503 | 8.73E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene21676 | 0.822851 | 1.90E-53 | -1.69E-46 |
| MS.gene053006 | MS.gene21676 | 0.802298 | 6.00E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene21676 | 0.825544 | 4.42E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene21676 | 0.839361 | 1.66E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene21676 | 0.804865 | 1.76E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene21676 | 0.808574 | 2.90E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene21676 | 0.815537 | 8.79E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene21676 | 0.803993 | 2.67E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene21676 | 0.80014 | 1.66E-48 | -1.69E-46 |
| MS.gene054559 | MS.gene21676 | 0.834692 | 2.59E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene21676 | 0.83288 | 7.34E-56 | -1.69E-46 |
| MS.gene054657 | MS.gene21676 | 0.806954 | 6.40E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene21676 | 0.822695 | 2.06E-53 | -1.69E-46 |
| MS.gene05510 | MS.gene21676 | 0.816525 | 5.29E-52 | -1.69E-46 |
| MS.gene055222 | MS.gene21676 | 0.807343 | 5.29E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene21676 | 0.810579 | 1.07E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene21676 | 0.825941 | 3.56E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene21676 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene21676 | 0.801149 | 1.03E-48 | -1.69E-46 |
| MS.gene056173 | MS.gene21676 | 0.821612 | 3.68E-53 | -1.69E-46 |
| MS.gene056480 | MS.gene21676 | 0.81615 | 6.41E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene21676 | 0.850667 | 1.46E-60 | -1.69E-46 |
| MS.gene057208 | MS.gene21676 | 0.807439 | 5.05E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene21676 | 0.803315 | 3.70E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene21676 | 0.820258 | 7.54E-53 | -1.69E-46 |
| MS.gene057855 | MS.gene21676 | 0.83497 | 2.20E-56 | -1.69E-46 |
| MS.gene057869 | MS.gene21676 | 0.802518 | 5.40E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene21676 | 0.818665 | 1.74E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene21676 | 0.835327 | 1.79E-56 | -1.69E-46 |
| MS.gene058146 | MS.gene21676 | 0.828972 | 6.68E-55 | -1.69E-46 |
| MS.gene058399 | MS.gene21676 | 0.802107 | 6.56E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene21676 | 0.852385 | 4.78E-61 | -1.69E-46 |
| MS.gene058549 | MS.gene21676 | 0.809216 | 2.11E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene21676 | 0.823634 | 1.25E-53 | -1.69E-46 |
| MS.gene058783 | MS.gene21676 | 0.80463 | 1.97E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene21676 | 0.871564 | 6.21E-67 | -1.69E-46 |
| MS.gene05979 | MS.gene21676 | 0.830448 | 2.92E-55 | -1.69E-46 |
| MS.gene059842 | MS.gene21676 | 0.81031 | 1.23E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene21676 | 0.838333 | 3.06E-57 | -1.69E-46 |
| MS.gene060310 | MS.gene21676 | 0.821897 | 3.16E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene21676 | 0.843314 | 1.51E-58 | -1.69E-46 |
| MS.gene06052 | MS.gene21676 | 0.828688 | 7.82E-55 | -1.69E-46 |
| MS.gene060683 | MS.gene21676 | 0.807777 | 4.28E-50 | -1.69E-46 |
| MS.gene060685 | MS.gene21676 | 0.80965 | 1.70E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene21676 | 0.803078 | 4.14E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene21676 | 0.823239 | 1.54E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21676.t1 | MTR_5g009080 | 99.376 | 481 | 3 | 0 | 1 | 481 | 1 | 481 | 0.0 | 990 |
| MS.gene21676.t1 | MTR_4g076140 | 75.783 | 479 | 108 | 6 | 4 | 481 | 1 | 472 | 0.0 | 742 |
| MS.gene21676.t1 | MTR_3g022830 | 54.139 | 447 | 193 | 5 | 34 | 480 | 4 | 438 | 7.63e-170 | 486 |
| MS.gene21676.t1 | MTR_7g027190 | 34.658 | 453 | 209 | 7 | 45 | 478 | 289 | 673 | 5.81e-83 | 270 |
| MS.gene21676.t1 | MTR_1g106590 | 88.983 | 118 | 13 | 0 | 50 | 167 | 124 | 241 | 9.84e-67 | 218 |
| MS.gene21676.t1 | MTR_1g106590 | 90.722 | 97 | 9 | 0 | 286 | 382 | 244 | 340 | 4.84e-39 | 145 |
| MS.gene21676.t1 | MTR_5g097480 | 30.254 | 433 | 233 | 8 | 53 | 478 | 174 | 544 | 1.15e-59 | 205 |
| MS.gene21676.t1 | MTR_8g442410 | 30.455 | 440 | 236 | 10 | 49 | 479 | 148 | 526 | 1.23e-59 | 205 |
| MS.gene21676.t1 | MTR_1g029420 | 28.605 | 430 | 240 | 7 | 55 | 478 | 224 | 592 | 9.58e-54 | 190 |
| MS.gene21676.t1 | MTR_3g089055 | 28.140 | 430 | 242 | 7 | 55 | 478 | 202 | 570 | 2.43e-52 | 186 |
| MS.gene21676.t1 | MTR_3g089055 | 28.140 | 430 | 242 | 7 | 55 | 478 | 197 | 565 | 2.47e-52 | 186 |
| MS.gene21676.t1 | MTR_4g064160 | 28.009 | 432 | 237 | 7 | 56 | 477 | 316 | 683 | 9.18e-47 | 172 |
| MS.gene21676.t1 | MTR_4g064120 | 25.959 | 443 | 260 | 6 | 42 | 475 | 240 | 623 | 5.89e-46 | 169 |
| MS.gene21676.t1 | MTR_4g104020 | 27.563 | 439 | 249 | 13 | 50 | 479 | 143 | 521 | 8.36e-46 | 167 |
| MS.gene21676.t1 | MTR_4g064150 | 27.189 | 434 | 248 | 7 | 53 | 477 | 358 | 732 | 1.41e-45 | 169 |
| MS.gene21676.t1 | MTR_3g022580 | 42.857 | 203 | 75 | 5 | 279 | 481 | 25 | 186 | 4.02e-45 | 156 |
| MS.gene21676.t1 | MTR_4g064200 | 26.620 | 432 | 247 | 7 | 53 | 477 | 281 | 649 | 4.10e-45 | 167 |
| MS.gene21676.t1 | MTR_4g064180 | 25.734 | 443 | 261 | 7 | 42 | 475 | 240 | 623 | 3.88e-43 | 161 |
| MS.gene21676.t1 | MTR_7g062120 | 27.040 | 429 | 247 | 7 | 56 | 478 | 372 | 740 | 2.94e-42 | 160 |
| MS.gene21676.t1 | MTR_2g097310 | 26.531 | 441 | 258 | 9 | 42 | 477 | 258 | 637 | 3.25e-42 | 159 |
| MS.gene21676.t1 | MTR_4g133660 | 26.512 | 430 | 246 | 10 | 56 | 477 | 175 | 542 | 4.44e-42 | 157 |
| MS.gene21676.t1 | MTR_1g069725 | 28.899 | 436 | 236 | 11 | 48 | 480 | 101 | 465 | 1.07e-41 | 155 |
| MS.gene21676.t1 | MTR_2g097390 | 25.792 | 442 | 262 | 9 | 41 | 477 | 260 | 640 | 3.86e-41 | 156 |
| MS.gene21676.t1 | MTR_7g074650 | 41.146 | 192 | 108 | 2 | 60 | 249 | 442 | 630 | 2.40e-39 | 152 |
| MS.gene21676.t1 | MTR_7g074650 | 38.255 | 149 | 87 | 3 | 333 | 478 | 646 | 792 | 3.10e-23 | 103 |
| MS.gene21676.t1 | MTR_2g097350 | 25.850 | 441 | 261 | 9 | 42 | 477 | 260 | 639 | 3.84e-39 | 150 |
| MS.gene21676.t1 | MTR_4g077760 | 26.147 | 436 | 242 | 9 | 53 | 478 | 190 | 555 | 4.08e-38 | 146 |
| MS.gene21676.t1 | MTR_2g034280 | 27.056 | 462 | 256 | 12 | 33 | 478 | 179 | 575 | 1.47e-37 | 145 |
| MS.gene21676.t1 | MTR_4g102790 | 33.023 | 215 | 140 | 1 | 49 | 259 | 285 | 499 | 2.02e-37 | 145 |
| MS.gene21676.t1 | MTR_4g102790 | 32.692 | 156 | 98 | 5 | 328 | 477 | 507 | 661 | 2.87e-19 | 91.3 |
| MS.gene21676.t1 | MTR_3g065980 | 34.685 | 222 | 131 | 3 | 44 | 260 | 160 | 372 | 2.20e-36 | 141 |
| MS.gene21676.t1 | MTR_3g065980 | 37.576 | 165 | 90 | 3 | 327 | 478 | 376 | 540 | 6.66e-30 | 123 |
| MS.gene21676.t1 | MTR_2g097380 | 24.700 | 417 | 223 | 9 | 64 | 477 | 232 | 560 | 1.95e-34 | 136 |
| MS.gene21676.t1 | MTR_2g097463 | 27.166 | 427 | 250 | 10 | 53 | 477 | 287 | 654 | 1.99e-34 | 137 |
| MS.gene21676.t1 | MTR_2g089100 | 24.943 | 441 | 274 | 9 | 50 | 477 | 46 | 442 | 5.14e-34 | 133 |
| MS.gene21676.t1 | MTR_2g082090 | 35.238 | 210 | 129 | 2 | 53 | 256 | 209 | 417 | 1.17e-31 | 128 |
| MS.gene21676.t1 | MTR_2g082090 | 41.611 | 149 | 86 | 1 | 329 | 477 | 431 | 578 | 2.97e-29 | 121 |
| MS.gene21676.t1 | MTR_3g022005 | 54.082 | 98 | 44 | 1 | 384 | 481 | 32 | 128 | 2.56e-31 | 117 |
| MS.gene21676.t1 | MTR_5g094450 | 28.972 | 214 | 144 | 3 | 53 | 258 | 158 | 371 | 3.67e-29 | 120 |
| MS.gene21676.t1 | MTR_5g094450 | 36.879 | 141 | 88 | 1 | 338 | 478 | 393 | 532 | 6.85e-24 | 105 |
| MS.gene21676.t1 | MTR_3g027430 | 48.305 | 118 | 40 | 1 | 139 | 256 | 184 | 280 | 1.60e-28 | 115 |
| MS.gene21676.t1 | MTR_2g034260 | 24.675 | 462 | 265 | 12 | 33 | 478 | 190 | 584 | 3.43e-28 | 118 |
| MS.gene21676.t1 | MTR_3g056110 | 27.645 | 293 | 187 | 7 | 53 | 329 | 172 | 455 | 1.02e-26 | 113 |
| MS.gene21676.t1 | MTR_3g056110 | 36.170 | 141 | 89 | 1 | 338 | 478 | 403 | 542 | 3.25e-25 | 108 |
| MS.gene21676.t1 | MTR_2g097410 | 29.048 | 210 | 142 | 2 | 56 | 258 | 371 | 580 | 2.39e-26 | 113 |
| MS.gene21676.t1 | MTR_2g097410 | 28.188 | 149 | 107 | 0 | 329 | 477 | 592 | 740 | 2.55e-18 | 88.6 |
| MS.gene21676.t1 | MTR_2g026250 | 30.317 | 221 | 137 | 5 | 57 | 267 | 229 | 442 | 6.06e-26 | 111 |
| MS.gene21676.t1 | MTR_2g026250 | 34.507 | 142 | 92 | 1 | 338 | 479 | 457 | 597 | 7.59e-21 | 96.3 |
| MS.gene21676.t1 | MTR_7g109580 | 25.877 | 456 | 256 | 13 | 36 | 478 | 168 | 554 | 9.81e-26 | 110 |
| MS.gene21676.t1 | MTR_5g058860 | 26.350 | 463 | 245 | 15 | 41 | 477 | 104 | 496 | 1.19e-25 | 110 |
| MS.gene21676.t1 | MTR_5g015950 | 24.658 | 438 | 287 | 11 | 56 | 477 | 35 | 445 | 1.29e-25 | 109 |
| MS.gene21676.t1 | MTR_3g053270 | 24.658 | 438 | 287 | 11 | 56 | 477 | 35 | 445 | 1.29e-25 | 109 |
| MS.gene21676.t1 | MTR_4g095500 | 23.729 | 472 | 285 | 12 | 38 | 477 | 39 | 467 | 2.97e-25 | 108 |
| MS.gene21676.t1 | MTR_4g097080 | 29.091 | 220 | 132 | 4 | 55 | 258 | 132 | 343 | 6.67e-25 | 107 |
| MS.gene21676.t1 | MTR_4g097080 | 30.247 | 162 | 106 | 4 | 322 | 478 | 344 | 503 | 2.23e-13 | 72.8 |
| MS.gene21676.t1 | MTR_2g097467 | 31.100 | 209 | 134 | 2 | 56 | 258 | 289 | 493 | 6.74e-25 | 108 |
| MS.gene21676.t1 | MTR_2g097467 | 30.201 | 149 | 104 | 0 | 329 | 477 | 505 | 653 | 1.07e-17 | 86.7 |
| MS.gene21676.t1 | MTR_2g097473 | 31.100 | 209 | 134 | 2 | 56 | 258 | 289 | 493 | 1.80e-24 | 107 |
| MS.gene21676.t1 | MTR_2g097473 | 29.530 | 149 | 105 | 0 | 329 | 477 | 505 | 653 | 2.48e-16 | 82.0 |
| MS.gene21676.t1 | MTR_7g057230 | 27.586 | 348 | 176 | 10 | 141 | 477 | 374 | 656 | 1.09e-23 | 105 |
| MS.gene21676.t1 | MTR_5g015490 | 30.769 | 221 | 137 | 5 | 50 | 258 | 108 | 324 | 1.12e-23 | 103 |
| MS.gene21676.t1 | MTR_5g015490 | 29.032 | 155 | 103 | 4 | 329 | 478 | 338 | 490 | 5.22e-11 | 65.1 |
| MS.gene21676.t1 | MTR_4g076020 | 29.534 | 193 | 120 | 4 | 60 | 249 | 88 | 267 | 2.19e-22 | 99.8 |
| MS.gene21676.t1 | MTR_4g076020 | 39.456 | 147 | 87 | 2 | 332 | 478 | 285 | 429 | 3.70e-21 | 96.3 |
| MS.gene21676.t1 | MTR_2g034250 | 33.974 | 156 | 94 | 3 | 328 | 478 | 434 | 585 | 3.13e-22 | 100 |
| MS.gene21676.t1 | MTR_2g034250 | 29.032 | 248 | 160 | 6 | 33 | 264 | 186 | 433 | 5.91e-20 | 93.2 |
| MS.gene21676.t1 | MTR_8g093070 | 24.598 | 435 | 243 | 16 | 53 | 477 | 136 | 495 | 7.91e-22 | 98.6 |
| MS.gene21676.t1 | MTR_2g099110 | 26.512 | 215 | 148 | 4 | 47 | 252 | 65 | 278 | 1.62e-20 | 94.4 |
| MS.gene21676.t1 | MTR_3g021320 | 38.158 | 152 | 64 | 3 | 156 | 307 | 1 | 122 | 1.81e-20 | 87.4 |
| MS.gene21676.t1 | MTR_6g047750 | 23.570 | 437 | 249 | 12 | 57 | 478 | 296 | 662 | 1.01e-19 | 92.8 |
| MS.gene21676.t1 | MTR_1g096030 | 27.839 | 273 | 159 | 9 | 47 | 288 | 71 | 336 | 1.39e-19 | 91.7 |
| MS.gene21676.t1 | MTR_1g096030 | 29.143 | 175 | 106 | 4 | 323 | 479 | 286 | 460 | 7.97e-19 | 89.4 |
| MS.gene21676.t1 | MTR_4g026485 | 22.430 | 428 | 255 | 11 | 57 | 479 | 270 | 625 | 5.56e-19 | 90.5 |
| MS.gene21676.t1 | MTR_3g072710 | 28.163 | 245 | 136 | 8 | 41 | 255 | 105 | 339 | 3.29e-18 | 87.8 |
| MS.gene21676.t1 | MTR_3g072710 | 31.707 | 164 | 98 | 5 | 321 | 477 | 343 | 499 | 1.07e-13 | 73.6 |
| MS.gene21676.t1 | MTR_1g086970 | 29.570 | 186 | 117 | 5 | 297 | 478 | 303 | 478 | 7.41e-18 | 86.3 |
| MS.gene21676.t1 | MTR_1g086970 | 29.388 | 245 | 154 | 9 | 36 | 263 | 84 | 326 | 1.79e-13 | 72.8 |
| MS.gene21676.t1 | MTR_0092s0100 | 30.303 | 165 | 113 | 1 | 33 | 197 | 349 | 511 | 5.84e-13 | 71.6 |
| MS.gene21676.t1 | MTR_0092s0100 | 30.303 | 165 | 113 | 1 | 33 | 197 | 352 | 514 | 6.23e-13 | 71.6 |
| MS.gene21676.t1 | MTR_8g020840 | 23.409 | 440 | 245 | 16 | 50 | 466 | 165 | 535 | 7.35e-13 | 71.2 |
| MS.gene21676.t1 | MTR_3g025340 | 49.180 | 61 | 31 | 0 | 114 | 174 | 9 | 69 | 8.72e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21676.t1 | AT1G50420 | 65.914 | 487 | 155 | 7 | 1 | 481 | 1 | 482 | 0.0 | 650 |
| MS.gene21676.t1 | AT3G54220 | 33.258 | 442 | 218 | 10 | 45 | 480 | 282 | 652 | 1.09e-60 | 210 |
| MS.gene21676.t1 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 131 | 526 | 6.53e-55 | 192 |
| MS.gene21676.t1 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 202 | 597 | 2.19e-54 | 192 |
| MS.gene21676.t1 | AT1G50600 | 29.476 | 458 | 251 | 10 | 31 | 478 | 206 | 601 | 2.20e-54 | 192 |
| MS.gene21676.t1 | AT1G21450 | 29.002 | 431 | 238 | 5 | 55 | 478 | 224 | 593 | 2.82e-54 | 192 |
| MS.gene21676.t1 | AT4G17230 | 26.622 | 447 | 259 | 7 | 39 | 478 | 141 | 525 | 7.37e-47 | 170 |
| MS.gene21676.t1 | AT4G17230 | 26.622 | 447 | 259 | 7 | 39 | 478 | 141 | 525 | 7.37e-47 | 170 |
| MS.gene21676.t1 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 8.00e-44 | 162 |
| MS.gene21676.t1 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 143 | 528 | 8.00e-44 | 162 |
| MS.gene21676.t1 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 308 | 693 | 4.38e-43 | 162 |
| MS.gene21676.t1 | AT1G07520 | 24.099 | 444 | 268 | 6 | 45 | 477 | 307 | 692 | 4.52e-43 | 162 |
| MS.gene21676.t1 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 3 | 374 | 3.42e-41 | 151 |
| MS.gene21676.t1 | AT1G07530 | 25.408 | 429 | 253 | 7 | 56 | 477 | 396 | 764 | 1.75e-40 | 155 |
| MS.gene21676.t1 | AT5G59450 | 25.688 | 436 | 253 | 9 | 53 | 478 | 224 | 598 | 3.01e-40 | 153 |
| MS.gene21676.t1 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 179 | 550 | 3.73e-40 | 152 |
| MS.gene21676.t1 | AT3G46600 | 26.097 | 433 | 253 | 6 | 55 | 481 | 211 | 582 | 6.85e-40 | 152 |
| MS.gene21676.t1 | AT2G29065 | 25.513 | 439 | 247 | 10 | 56 | 477 | 252 | 627 | 8.41e-39 | 149 |
| MS.gene21676.t1 | AT1G66350 | 35.616 | 219 | 132 | 4 | 44 | 260 | 143 | 354 | 2.80e-36 | 140 |
| MS.gene21676.t1 | AT1G66350 | 37.179 | 156 | 93 | 2 | 327 | 481 | 358 | 509 | 4.41e-31 | 126 |
| MS.gene21676.t1 | AT1G14920 | 36.161 | 224 | 129 | 4 | 44 | 260 | 160 | 376 | 1.06e-34 | 136 |
| MS.gene21676.t1 | AT1G14920 | 34.868 | 152 | 95 | 2 | 328 | 478 | 381 | 529 | 9.21e-27 | 113 |
| MS.gene21676.t1 | AT2G01570 | 35.683 | 227 | 126 | 5 | 44 | 260 | 212 | 428 | 1.84e-34 | 136 |
| MS.gene21676.t1 | AT2G01570 | 37.500 | 152 | 91 | 3 | 328 | 478 | 433 | 581 | 4.95e-27 | 114 |
| MS.gene21676.t1 | AT5G17490 | 34.404 | 218 | 132 | 4 | 47 | 260 | 151 | 361 | 2.47e-34 | 135 |
| MS.gene21676.t1 | AT5G17490 | 38.562 | 153 | 92 | 2 | 327 | 478 | 365 | 516 | 2.12e-27 | 115 |
| MS.gene21676.t1 | AT5G48150 | 28.975 | 283 | 189 | 4 | 57 | 329 | 123 | 403 | 6.90e-34 | 134 |
| MS.gene21676.t1 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 9.52e-27 | 113 |
| MS.gene21676.t1 | AT5G48150 | 28.975 | 283 | 189 | 4 | 57 | 329 | 123 | 403 | 6.90e-34 | 134 |
| MS.gene21676.t1 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 9.52e-27 | 113 |
| MS.gene21676.t1 | AT5G48150 | 28.975 | 283 | 189 | 4 | 57 | 329 | 123 | 403 | 6.90e-34 | 134 |
| MS.gene21676.t1 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 9.52e-27 | 113 |
| MS.gene21676.t1 | AT5G48150 | 28.975 | 283 | 189 | 4 | 57 | 329 | 123 | 403 | 6.90e-34 | 134 |
| MS.gene21676.t1 | AT5G48150 | 36.709 | 158 | 99 | 1 | 321 | 478 | 334 | 490 | 9.52e-27 | 113 |
| MS.gene21676.t1 | AT5G66770 | 27.397 | 438 | 236 | 13 | 53 | 478 | 217 | 584 | 4.04e-33 | 132 |
| MS.gene21676.t1 | AT3G03450 | 32.287 | 223 | 142 | 4 | 44 | 260 | 171 | 390 | 1.23e-32 | 130 |
| MS.gene21676.t1 | AT3G03450 | 39.355 | 155 | 92 | 2 | 325 | 478 | 392 | 545 | 2.39e-31 | 127 |
| MS.gene21676.t1 | AT1G63100 | 32.110 | 218 | 139 | 3 | 48 | 259 | 244 | 458 | 2.29e-32 | 130 |
| MS.gene21676.t1 | AT1G63100 | 36.196 | 163 | 91 | 3 | 328 | 477 | 466 | 628 | 9.55e-25 | 108 |
| MS.gene21676.t1 | AT1G63100 | 32.110 | 218 | 139 | 3 | 48 | 259 | 269 | 483 | 2.85e-32 | 130 |
| MS.gene21676.t1 | AT1G63100 | 36.196 | 163 | 91 | 3 | 328 | 477 | 491 | 653 | 1.28e-24 | 107 |
| MS.gene21676.t1 | AT5G41920 | 32.338 | 201 | 132 | 3 | 53 | 249 | 40 | 240 | 1.53e-31 | 125 |
| MS.gene21676.t1 | AT5G41920 | 36.774 | 155 | 91 | 3 | 327 | 480 | 254 | 402 | 1.93e-20 | 93.6 |
| MS.gene21676.t1 | AT2G37650 | 24.186 | 430 | 256 | 7 | 56 | 478 | 347 | 713 | 3.61e-31 | 127 |
| MS.gene21676.t1 | AT2G37650 | 24.186 | 430 | 256 | 7 | 56 | 478 | 335 | 701 | 5.03e-31 | 127 |
| MS.gene21676.t1 | AT2G04890 | 33.491 | 212 | 136 | 3 | 56 | 267 | 53 | 259 | 9.51e-31 | 123 |
| MS.gene21676.t1 | AT2G04890 | 40.000 | 150 | 89 | 1 | 329 | 478 | 265 | 413 | 9.03e-28 | 115 |
| MS.gene21676.t1 | AT5G52510 | 25.397 | 441 | 233 | 11 | 61 | 478 | 273 | 640 | 2.84e-30 | 124 |
| MS.gene21676.t1 | AT1G55580 | 36.184 | 152 | 96 | 1 | 328 | 478 | 294 | 445 | 3.76e-28 | 116 |
| MS.gene21676.t1 | AT1G55580 | 24.375 | 320 | 197 | 7 | 52 | 329 | 40 | 356 | 7.71e-15 | 77.0 |
| MS.gene21676.t1 | AT3G49950 | 24.831 | 443 | 255 | 12 | 52 | 477 | 26 | 407 | 5.26e-25 | 107 |
| MS.gene21676.t1 | AT2G29060 | 29.245 | 212 | 141 | 3 | 56 | 259 | 321 | 531 | 3.38e-24 | 106 |
| MS.gene21676.t1 | AT2G29060 | 27.273 | 154 | 103 | 3 | 329 | 477 | 542 | 691 | 2.10e-15 | 79.3 |
| MS.gene21676.t1 | AT2G29060 | 29.245 | 212 | 141 | 3 | 56 | 259 | 284 | 494 | 3.83e-24 | 106 |
| MS.gene21676.t1 | AT2G29060 | 27.273 | 154 | 103 | 3 | 329 | 477 | 505 | 654 | 1.70e-15 | 79.7 |
| MS.gene21676.t1 | AT4G37650 | 26.432 | 227 | 135 | 4 | 56 | 258 | 146 | 364 | 1.70e-22 | 100 |
| MS.gene21676.t1 | AT4G37650 | 26.415 | 159 | 107 | 3 | 329 | 478 | 372 | 529 | 6.41e-11 | 65.1 |
| MS.gene21676.t1 | AT4G08250 | 29.596 | 223 | 139 | 7 | 47 | 255 | 98 | 316 | 3.59e-20 | 93.6 |
| MS.gene21676.t1 | AT3G50650 | 30.876 | 217 | 133 | 4 | 58 | 267 | 177 | 383 | 6.17e-20 | 93.2 |
| MS.gene21676.t1 | AT3G50650 | 28.859 | 149 | 99 | 3 | 337 | 478 | 394 | 542 | 1.79e-13 | 73.2 |
Find 91 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAATTCTTGTGGAATTTA+AGG | 0.089377 | 5.2:+2807173 | None:intergenic |
| TATGCTTTCTGAAGAAATTA+TGG | 0.230947 | 5.2:-2807151 | MS.gene21676:CDS |
| TTTGAGTTTCTTGACATAAT+AGG | 0.254589 | 5.2:+2806703 | None:intergenic |
| TGCAGCATTGTTTGATTGTT+TGG | 0.259936 | 5.2:-2806413 | MS.gene21676:CDS |
| CAGCTTCTTCAGAAAGCTTA+TGG | 0.264058 | 5.2:+2806893 | None:intergenic |
| TCATCAGCAGAAAGAGGTTT+TGG | 0.271986 | 5.2:-2806926 | MS.gene21676:CDS |
| AACATACCATAATAGCTTAA+AGG | 0.277960 | 5.2:+2806223 | None:intergenic |
| ACAATGCTGCATAAGAATAT+AGG | 0.281076 | 5.2:+2806425 | None:intergenic |
| TCAAGCTATTGTTGAATCTA+TGG | 0.285430 | 5.2:-2807070 | MS.gene21676:CDS |
| TGCTAAGAACAGGGTTGAAT+TGG | 0.312189 | 5.2:+2806851 | None:intergenic |
| CTCAAATGAGGAGGACCTTC+AGG | 0.312197 | 5.2:+2806961 | None:intergenic |
| TTGTGGAATTTAAGGCTCTA+TGG | 0.321651 | 5.2:+2807181 | None:intergenic |
| ATCTATGGAAGGTGAGAAAA+TGG | 0.335503 | 5.2:-2807055 | MS.gene21676:CDS |
| TCTGCAGTTACATTCCCTTT+TGG | 0.339325 | 5.2:-2806761 | MS.gene21676:CDS |
| AACATCCCTAGAGAGATTAA+AGG | 0.354098 | 5.2:-2806374 | MS.gene21676:CDS |
| AAGCTATTATGGTATGTTGC+AGG | 0.357915 | 5.2:-2806218 | MS.gene21676:CDS |
| AATCACCTAATGATGTGTTT+TGG | 0.364016 | 5.2:+2806647 | None:intergenic |
| TAGTAACTTGCTGGCAAGAT+AGG | 0.366004 | 5.2:-2806132 | MS.gene21676:CDS |
| CAATGCTGCATAAGAATATA+GGG | 0.366018 | 5.2:+2806426 | None:intergenic |
| GACAAACTTCGTGTGAAAAC+CGG | 0.371883 | 5.2:-2806808 | MS.gene21676:CDS |
| AATGTGCCTTTAAGCTATTA+TGG | 0.377946 | 5.2:-2806229 | MS.gene21676:CDS |
| AGACTTGATTCGTGTGGATT+TGG | 0.381293 | 5.2:-2806253 | MS.gene21676:CDS |
| ATGAACCAAAACACATCATT+AGG | 0.381360 | 5.2:-2806652 | MS.gene21676:CDS |
| TGTGCAAATCATGTAGCTTC+TGG | 0.411195 | 5.2:-2807339 | MS.gene21676:CDS |
| TCACCTAGCATAGGAGGAAT+AGG | 0.416008 | 5.2:-2807438 | MS.gene21676:CDS |
| TATAGAATGAGAGAAGAAAA+TGG | 0.416830 | 5.2:-2806160 | MS.gene21676:CDS |
| CTGATAGGATACTTAAAACT+TGG | 0.427400 | 5.2:-2807212 | MS.gene21676:CDS |
| AGAAGGTTTCTACAGAGTTA+TGG | 0.432910 | 5.2:-2806193 | MS.gene21676:CDS |
| TCACTGAAGCACTTGCTGAT+AGG | 0.433040 | 5.2:-2807227 | MS.gene21676:CDS |
| ATGGTTGTGTAGTAACTTGC+TGG | 0.448692 | 5.2:-2806141 | MS.gene21676:CDS |
| TCGGTTACAACCATGACTTT+TGG | 0.460163 | 5.2:+2806499 | None:intergenic |
| TCACAACGGTTCAACATTGA+TGG | 0.461983 | 5.2:-2806464 | MS.gene21676:CDS |
| TTGCACAAGTGATTAACAAA+TGG | 0.462673 | 5.2:+2807355 | None:intergenic |
| CAACAACAGCTTGGAGAGCT+AGG | 0.464849 | 5.2:-2806099 | MS.gene21676:CDS |
| TCTCAACCTTTAATCTCTCT+AGG | 0.466126 | 5.2:+2806368 | None:intergenic |
| ATTCATCATCCAAGGCCAAA+AGG | 0.470579 | 5.2:+2806746 | None:intergenic |
| GTTGTGATTCGAGTCCTGTT+CGG | 0.477667 | 5.2:+2806480 | None:intergenic |
| GAATCTATGTTACAAGAAGA+AGG | 0.480629 | 5.2:-2807513 | MS.gene21676:CDS |
| GACGATGATGATGTTGAATC+AGG | 0.480967 | 5.2:+2806586 | None:intergenic |
| AGAATTGAAATCTGAGGAAA+GGG | 0.483022 | 5.2:-2807391 | MS.gene21676:CDS |
| ATATATGCCACCTTCAAGAA+AGG | 0.483743 | 5.2:+2807102 | None:intergenic |
| ATTATGTCAAGAAACTCAAA+TGG | 0.483850 | 5.2:-2806700 | MS.gene21676:CDS |
| CCTCCTCATTTGAGAATCAC+AGG | 0.490720 | 5.2:-2806952 | MS.gene21676:CDS |
| CTCTGCATAGTATCTCCATC+AGG | 0.491525 | 5.2:+2807264 | None:intergenic |
| AAGGTTGAGAAGATGCTGTT+TGG | 0.498109 | 5.2:-2806355 | MS.gene21676:CDS |
| AGAAAGCATAATAATTCTTG+TGG | 0.500494 | 5.2:+2807164 | None:intergenic |
| AGTCATGGTTGTAACCGAAC+AGG | 0.503090 | 5.2:-2806494 | MS.gene21676:CDS |
| GCTAGGTGAAACTGACATCA+TGG | 0.505670 | 5.2:+2807452 | None:intergenic |
| GAGAATTGAAATCTGAGGAA+AGG | 0.506938 | 5.2:-2807392 | MS.gene21676:CDS |
| TCTCTACTAAGCCATGGATA+AGG | 0.507017 | 5.2:+2807411 | None:intergenic |
| AGGATACTTAAAACTTGGCC+TGG | 0.515401 | 5.2:-2807207 | MS.gene21676:CDS |
| CTACAGAGTTATGGTTGTGA+GGG | 0.516522 | 5.2:-2806184 | MS.gene21676:CDS |
| TCACAGCTTGCAACTCCTGA+TGG | 0.516747 | 5.2:-2807279 | MS.gene21676:CDS |
| TTCATCATCCAAGGCCAAAA+GGG | 0.519127 | 5.2:+2806747 | None:intergenic |
| TTCAATTCTCTACTAAGCCA+TGG | 0.520245 | 5.2:+2807405 | None:intergenic |
| CTCAACCTTTAATCTCTCTA+GGG | 0.522051 | 5.2:+2806369 | None:intergenic |
| TATATGCCACCTTCAAGAAA+GGG | 0.525767 | 5.2:+2807103 | None:intergenic |
| TTGTGAAGGAGCTGAAAGAA+AGG | 0.532875 | 5.2:-2806308 | MS.gene21676:CDS |
| AAAAGAGCAATCCATTGTGC+AGG | 0.535750 | 5.2:+2807003 | None:intergenic |
| AGGGATTCATCAGCAGAAAG+AGG | 0.542783 | 5.2:-2806932 | MS.gene21676:CDS |
| TTCATCTGCTTCAATGAATG+TGG | 0.545313 | 5.2:-2806554 | MS.gene21676:CDS |
| ACTAATTGCAAGTGCCTCGC+CGG | 0.546001 | 5.2:+2806789 | None:intergenic |
| TTTAAGGCTCTATGGAGTCC+AGG | 0.546774 | 5.2:+2807189 | None:intergenic |
| ATGGTATGTTGCAGGCAAGA+AGG | 0.557823 | 5.2:-2806210 | MS.gene21676:CDS |
| GATCCTATTCCTCCTATGCT+AGG | 0.562234 | 5.2:+2807435 | None:intergenic |
| TCAGTTTCACCTAGCATAGG+AGG | 0.562988 | 5.2:-2807444 | MS.gene21676:CDS |
| AGAACAGGGTTGAATTGGAA+TGG | 0.565131 | 5.2:+2806856 | None:intergenic |
| TCTACAGAGTTATGGTTGTG+AGG | 0.567967 | 5.2:-2806185 | MS.gene21676:CDS |
| GATGATGTTGAATCAGGACT+TGG | 0.568985 | 5.2:+2806592 | None:intergenic |
| ATTGAAGCAGATGAAGATGC+TGG | 0.572949 | 5.2:+2806562 | None:intergenic |
| GAGTTTGTCACCAAAAGTCA+TGG | 0.575658 | 5.2:-2806509 | MS.gene21676:CDS |
| AAGAACATAATTGCTTGTGA+AGG | 0.580873 | 5.2:-2806322 | MS.gene21676:CDS |
| ATCCCTGTGATTCTCAAATG+AGG | 0.584689 | 5.2:+2806949 | None:intergenic |
| TGAGGATGATTCATCATCCA+AGG | 0.589137 | 5.2:+2806738 | None:intergenic |
| AATCTATGTTACAAGAAGAA+GGG | 0.598643 | 5.2:-2807512 | MS.gene21676:CDS |
| GAATAGGATCACCTTATCCA+TGG | 0.599511 | 5.2:-2807422 | MS.gene21676:CDS |
| GCTATTGTTGAATCTATGGA+AGG | 0.607832 | 5.2:-2807066 | MS.gene21676:CDS |
| TGAGAAGATGCTGTTTGGTG+AGG | 0.611876 | 5.2:-2806350 | MS.gene21676:CDS |
| ATGTCAGTTTCACCTAGCAT+AGG | 0.614550 | 5.2:-2807447 | MS.gene21676:CDS |
| ATCATGGAAAATAACTGTAG+AGG | 0.617197 | 5.2:+2807468 | None:intergenic |
| CTCCTCATTTGAGAATCACA+GGG | 0.617281 | 5.2:-2806951 | MS.gene21676:CDS |
| TTTCTAGCTTGCTAAGAACA+GGG | 0.622441 | 5.2:+2806842 | None:intergenic |
| ACGGTTCAACATTGATGGAG+AGG | 0.639461 | 5.2:-2806459 | MS.gene21676:CDS |
| TAGTAGAGAATTGAAATCTG+AGG | 0.644490 | 5.2:-2807397 | MS.gene21676:CDS |
| TGGATGATGAATCATCCTCA+AGG | 0.648643 | 5.2:-2806735 | MS.gene21676:CDS |
| ATGCTGCTGAACCTGCACAA+TGG | 0.650823 | 5.2:-2807014 | MS.gene21676:CDS |
| GAATTGAAATCTGAGGAAAG+GGG | 0.651416 | 5.2:-2807390 | MS.gene21676:CDS |
| TTTATGAGACTTGATTCGTG+TGG | 0.658284 | 5.2:-2806259 | MS.gene21676:CDS |
| CCTGTGATTCTCAAATGAGG+AGG | 0.663636 | 5.2:+2806952 | None:intergenic |
| ACTTCGTGTGAAAACCGGCG+AGG | 0.739069 | 5.2:-2806803 | MS.gene21676:CDS |
| GAACAGGACTCGAATCACAA+CGG | 0.767714 | 5.2:-2806478 | MS.gene21676:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTCTTGTGGAATTTA+AGG | + | chr5.2:2806439-2806458 | None:intergenic | 20.0% |
| !! | TGATTTACTTGAAAAAGATA+TGG | - | chr5.2:2806980-2806999 | MS.gene21676:CDS | 20.0% |
| ! | AACATACCATAATAGCTTAA+AGG | + | chr5.2:2807389-2807408 | None:intergenic | 25.0% |
| ! | AATCTATGTTACAAGAAGAA+GGG | - | chr5.2:2806097-2806116 | MS.gene21676:CDS | 25.0% |
| ! | ATTATGTCAAGAAACTCAAA+TGG | - | chr5.2:2806909-2806928 | MS.gene21676:CDS | 25.0% |
| ! | CTTGAAAAAGATATGGTTAA+TGG | - | chr5.2:2806987-2807006 | MS.gene21676:CDS | 25.0% |
| ! | GACATGAAAAACTTGATAAA+TGG | - | chr5.2:2807327-2807346 | MS.gene21676:CDS | 25.0% |
| ! | TATAGAATGAGAGAAGAAAA+TGG | - | chr5.2:2807449-2807468 | MS.gene21676:CDS | 25.0% |
| !! | AGAAAGCATAATAATTCTTG+TGG | + | chr5.2:2806448-2806467 | None:intergenic | 25.0% |
| !! | TATGCTTTCTGAAGAAATTA+TGG | - | chr5.2:2806458-2806477 | MS.gene21676:CDS | 25.0% |
| !! | TTTGAGTTTCTTGACATAAT+AGG | + | chr5.2:2806909-2806928 | None:intergenic | 25.0% |
| AAGAACATAATTGCTTGTGA+AGG | - | chr5.2:2807287-2807306 | MS.gene21676:CDS | 30.0% | |
| AATGTGCCTTTAAGCTATTA+TGG | - | chr5.2:2807380-2807399 | MS.gene21676:CDS | 30.0% | |
| ACAATGCTGCATAAGAATAT+AGG | + | chr5.2:2807187-2807206 | None:intergenic | 30.0% | |
| AGAATTGAAATCTGAGGAAA+GGG | - | chr5.2:2806218-2806237 | MS.gene21676:CDS | 30.0% | |
| ATCATGGAAAATAACTGTAG+AGG | + | chr5.2:2806144-2806163 | None:intergenic | 30.0% | |
| ATGAACCAAAACACATCATT+AGG | - | chr5.2:2806957-2806976 | MS.gene21676:CDS | 30.0% | |
| CAATGCTGCATAAGAATATA+GGG | + | chr5.2:2807186-2807205 | None:intergenic | 30.0% | |
| CTGATAGGATACTTAAAACT+TGG | - | chr5.2:2806397-2806416 | MS.gene21676:CDS | 30.0% | |
| GAATCTATGTTACAAGAAGA+AGG | - | chr5.2:2806096-2806115 | MS.gene21676:CDS | 30.0% | |
| TAGTAGAGAATTGAAATCTG+AGG | - | chr5.2:2806212-2806231 | MS.gene21676:CDS | 30.0% | |
| TCAAGCTATTGTTGAATCTA+TGG | - | chr5.2:2806539-2806558 | MS.gene21676:CDS | 30.0% | |
| TTGCACAAGTGATTAACAAA+TGG | + | chr5.2:2806257-2806276 | None:intergenic | 30.0% | |
| ! | AATCACCTAATGATGTGTTT+TGG | + | chr5.2:2806965-2806984 | None:intergenic | 30.0% |
| ! | AGAGTTTTCTCAATGCTTTA+TGG | - | chr5.2:2807078-2807097 | MS.gene21676:CDS | 30.0% |
| AACATCCCTAGAGAGATTAA+AGG | - | chr5.2:2807235-2807254 | MS.gene21676:CDS | 35.0% | |
| AAGCTATTATGGTATGTTGC+AGG | - | chr5.2:2807391-2807410 | MS.gene21676:CDS | 35.0% | |
| AGAAGGTTTCTACAGAGTTA+TGG | - | chr5.2:2807416-2807435 | MS.gene21676:CDS | 35.0% | |
| ATATATGCCACCTTCAAGAA+AGG | + | chr5.2:2806510-2806529 | None:intergenic | 35.0% | |
| ATCTATGGAAGGTGAGAAAA+TGG | - | chr5.2:2806554-2806573 | MS.gene21676:CDS | 35.0% | |
| CTCAACCTTTAATCTCTCTA+GGG | + | chr5.2:2807243-2807262 | None:intergenic | 35.0% | |
| GAATTGAAATCTGAGGAAAG+GGG | - | chr5.2:2806219-2806238 | MS.gene21676:CDS | 35.0% | |
| GAGAATTGAAATCTGAGGAA+AGG | - | chr5.2:2806217-2806236 | MS.gene21676:CDS | 35.0% | |
| GCTATTGTTGAATCTATGGA+AGG | - | chr5.2:2806543-2806562 | MS.gene21676:CDS | 35.0% | |
| TATATGCCACCTTCAAGAAA+GGG | + | chr5.2:2806509-2806528 | None:intergenic | 35.0% | |
| TCTCAACCTTTAATCTCTCT+AGG | + | chr5.2:2807244-2807263 | None:intergenic | 35.0% | |
| TGCAGCATTGTTTGATTGTT+TGG | - | chr5.2:2807196-2807215 | MS.gene21676:CDS | 35.0% | |
| TTCAATTCTCTACTAAGCCA+TGG | + | chr5.2:2806207-2806226 | None:intergenic | 35.0% | |
| TTCATCTGCTTCAATGAATG+TGG | - | chr5.2:2807055-2807074 | MS.gene21676:CDS | 35.0% | |
| ! | AATAGGAGTTTTTCTCCTTG+AGG | + | chr5.2:2806892-2806911 | None:intergenic | 35.0% |
| ! | TTGTGGAATTTAAGGCTCTA+TGG | + | chr5.2:2806431-2806450 | None:intergenic | 35.0% |
| ! | TTTATGAGACTTGATTCGTG+TGG | - | chr5.2:2807350-2807369 | MS.gene21676:CDS | 35.0% |
| !! | TTTCTAGCTTGCTAAGAACA+GGG | + | chr5.2:2806770-2806789 | None:intergenic | 35.0% |
| !!! | AAAGAGGTTTTGGAGCAAAT+GGG | - | chr5.2:2806693-2806712 | MS.gene21676:CDS | 35.0% |
| !!! | CTTTGTTTTCAACAACAGCT+TGG | - | chr5.2:2807501-2807520 | MS.gene21676:CDS | 35.0% |
| !!! | TGTGTTTTGGTTCATAAGCA+TGG | + | chr5.2:2806952-2806971 | None:intergenic | 35.0% |
| !!! | TTTTCTAGCTTGCTAAGAAC+AGG | + | chr5.2:2806771-2806790 | None:intergenic | 35.0% |
| AAAAGAGCAATCCATTGTGC+AGG | + | chr5.2:2806609-2806628 | None:intergenic | 40.0% | |
| AAGGTTGAGAAGATGCTGTT+TGG | - | chr5.2:2807254-2807273 | MS.gene21676:CDS | 40.0% | |
| AGAACAGGGTTGAATTGGAA+TGG | + | chr5.2:2806756-2806775 | None:intergenic | 40.0% | |
| AGGATACTTAAAACTTGGCC+TGG | - | chr5.2:2806402-2806421 | MS.gene21676:CDS | 40.0% | |
| ATCCCTGTGATTCTCAAATG+AGG | + | chr5.2:2806663-2806682 | None:intergenic | 40.0% | |
| ATGTCAGTTTCACCTAGCAT+AGG | - | chr5.2:2806162-2806181 | MS.gene21676:CDS | 40.0% | |
| ATTCATCATCCAAGGCCAAA+AGG | + | chr5.2:2806866-2806885 | None:intergenic | 40.0% | |
| ATTGAAGCAGATGAAGATGC+TGG | + | chr5.2:2807050-2807069 | None:intergenic | 40.0% | |
| CAGCTTCTTCAGAAAGCTTA+TGG | + | chr5.2:2806719-2806738 | None:intergenic | 40.0% | |
| CTACAGAGTTATGGTTGTGA+GGG | - | chr5.2:2807425-2807444 | MS.gene21676:CDS | 40.0% | |
| CTCCTCATTTGAGAATCACA+GGG | - | chr5.2:2806658-2806677 | MS.gene21676:CDS | 40.0% | |
| GAATAGGATCACCTTATCCA+TGG | - | chr5.2:2806187-2806206 | MS.gene21676:CDS | 40.0% | |
| GACAAACTTCGTGTGAAAAC+CGG | - | chr5.2:2806801-2806820 | MS.gene21676:CDS | 40.0% | |
| GAGTTTGTCACCAAAAGTCA+TGG | - | chr5.2:2807100-2807119 | MS.gene21676:CDS | 40.0% | |
| GATGATGTTGAATCAGGACT+TGG | + | chr5.2:2807020-2807039 | None:intergenic | 40.0% | |
| TCACAACGGTTCAACATTGA+TGG | - | chr5.2:2807145-2807164 | MS.gene21676:CDS | 40.0% | |
| TCTACAGAGTTATGGTTGTG+AGG | - | chr5.2:2807424-2807443 | MS.gene21676:CDS | 40.0% | |
| TCTCTACTAAGCCATGGATA+AGG | + | chr5.2:2806201-2806220 | None:intergenic | 40.0% | |
| TGAGGATGATTCATCATCCA+AGG | + | chr5.2:2806874-2806893 | None:intergenic | 40.0% | |
| TGCTAAGAACAGGGTTGAAT+TGG | + | chr5.2:2806761-2806780 | None:intergenic | 40.0% | |
| TGGATGATGAATCATCCTCA+AGG | - | chr5.2:2806874-2806893 | MS.gene21676:CDS | 40.0% | |
| TGTGCAAATCATGTAGCTTC+TGG | - | chr5.2:2806270-2806289 | MS.gene21676:CDS | 40.0% | |
| TTCATCATCCAAGGCCAAAA+GGG | + | chr5.2:2806865-2806884 | None:intergenic | 40.0% | |
| TTGTGAAGGAGCTGAAAGAA+AGG | - | chr5.2:2807301-2807320 | MS.gene21676:CDS | 40.0% | |
| ! | AGACTTGATTCGTGTGGATT+TGG | - | chr5.2:2807356-2807375 | MS.gene21676:CDS | 40.0% |
| ! | ATGGTTGTGTAGTAACTTGC+TGG | - | chr5.2:2807468-2807487 | MS.gene21676:CDS | 40.0% |
| ! | GACGATGATGATGTTGAATC+AGG | + | chr5.2:2807026-2807045 | None:intergenic | 40.0% |
| ! | TCATAAGCATGGCTTTTTGC+AGG | + | chr5.2:2806941-2806960 | None:intergenic | 40.0% |
| ! | TCATCAGCAGAAAGAGGTTT+TGG | - | chr5.2:2806683-2806702 | MS.gene21676:CDS | 40.0% |
| ! | TCGGTTACAACCATGACTTT+TGG | + | chr5.2:2807113-2807132 | None:intergenic | 40.0% |
| ! | TCTGCAGTTACATTCCCTTT+TGG | - | chr5.2:2806848-2806867 | MS.gene21676:CDS | 40.0% |
| ! | TGAGCTTTTCCCTTTCTTGA+AGG | - | chr5.2:2806497-2806516 | MS.gene21676:CDS | 40.0% |
| !! | TAGTAACTTGCTGGCAAGAT+AGG | - | chr5.2:2807477-2807496 | MS.gene21676:CDS | 40.0% |
| !!! | GAAAGAGGTTTTGGAGCAAA+TGG | - | chr5.2:2806692-2806711 | MS.gene21676:CDS | 40.0% |
| ACGGTTCAACATTGATGGAG+AGG | - | chr5.2:2807150-2807169 | MS.gene21676:CDS | 45.0% | |
| AGGGATTCATCAGCAGAAAG+AGG | - | chr5.2:2806677-2806696 | MS.gene21676:CDS | 45.0% | |
| AGTCATGGTTGTAACCGAAC+AGG | - | chr5.2:2807115-2807134 | MS.gene21676:CDS | 45.0% | |
| ATGGTATGTTGCAGGCAAGA+AGG | - | chr5.2:2807399-2807418 | MS.gene21676:CDS | 45.0% | |
| CCTCCTCATTTGAGAATCAC+AGG | - | chr5.2:2806657-2806676 | MS.gene21676:CDS | 45.0% | |
| CCTGTGATTCTCAAATGAGG+AGG | + | chr5.2:2806660-2806679 | None:intergenic | 45.0% | |
| CTCTGCATAGTATCTCCATC+AGG | + | chr5.2:2806348-2806367 | None:intergenic | 45.0% | |
| GAACAGGACTCGAATCACAA+CGG | - | chr5.2:2807131-2807150 | MS.gene21676:CDS | 45.0% | |
| GATCCTATTCCTCCTATGCT+AGG | + | chr5.2:2806177-2806196 | None:intergenic | 45.0% | |
| GCTAGGTGAAACTGACATCA+TGG | + | chr5.2:2806160-2806179 | None:intergenic | 45.0% | |
| GTTGTGATTCGAGTCCTGTT+CGG | + | chr5.2:2807132-2807151 | None:intergenic | 45.0% | |
| TCACCTAGCATAGGAGGAAT+AGG | - | chr5.2:2806171-2806190 | MS.gene21676:CDS | 45.0% | |
| TCAGTTTCACCTAGCATAGG+AGG | - | chr5.2:2806165-2806184 | MS.gene21676:CDS | 45.0% | |
| ! | GCTTTTCCCTTTCTTGAAGG+TGG | - | chr5.2:2806500-2806519 | MS.gene21676:CDS | 45.0% |
| ! | GTTACATTCCCTTTTGGCCT+TGG | - | chr5.2:2806854-2806873 | MS.gene21676:CDS | 45.0% |
| ! | TCACTGAAGCACTTGCTGAT+AGG | - | chr5.2:2806382-2806401 | MS.gene21676:CDS | 45.0% |
| ! | TGAGAAGATGCTGTTTGGTG+AGG | - | chr5.2:2807259-2807278 | MS.gene21676:CDS | 45.0% |
| ! | TTTAAGGCTCTATGGAGTCC+AGG | + | chr5.2:2806423-2806442 | None:intergenic | 45.0% |
| !! | GTTTTGAGTGCAAGACCTGA+AGG | - | chr5.2:2806633-2806652 | MS.gene21676:CDS | 45.0% |
| ACTAATTGCAAGTGCCTCGC+CGG | + | chr5.2:2806823-2806842 | None:intergenic | 50.0% | |
| ATGCTGCTGAACCTGCACAA+TGG | - | chr5.2:2806595-2806614 | MS.gene21676:CDS | 50.0% | |
| CAACAACAGCTTGGAGAGCT+AGG | - | chr5.2:2807510-2807529 | MS.gene21676:CDS | 50.0% | |
| CTCAAATGAGGAGGACCTTC+AGG | + | chr5.2:2806651-2806670 | None:intergenic | 50.0% | |
| TCACAGCTTGCAACTCCTGA+TGG | - | chr5.2:2806330-2806349 | MS.gene21676:CDS | 50.0% | |
| ACTTCGTGTGAAAACCGGCG+AGG | - | chr5.2:2806806-2806825 | MS.gene21676:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 2806093 | 2807538 | 2806093 | ID=MS.gene21676 |
| chr5.2 | mRNA | 2806093 | 2807538 | 2806093 | ID=MS.gene21676.t1;Parent=MS.gene21676 |
| chr5.2 | exon | 2806093 | 2807538 | 2806093 | ID=MS.gene21676.t1.exon1;Parent=MS.gene21676.t1 |
| chr5.2 | CDS | 2806093 | 2807538 | 2806093 | ID=cds.MS.gene21676.t1;Parent=MS.gene21676.t1 |
| Gene Sequence |
| Protein sequence |
