Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24905.t1 | XP_013454741.1 | 97.2 | 212 | 6 | 0 | 1 | 212 | 44 | 255 | 2.40E-117 | 431.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24905.t1 | Q9ZST8 | 80.7 | 212 | 39 | 1 | 1 | 212 | 44 | 253 | 2.1e-101 | 369.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24905.t1 | A0A072UGF8 | 97.2 | 212 | 6 | 0 | 1 | 212 | 44 | 255 | 1.7e-117 | 431.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene24905 | 0.833205 | 6.10E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene24905 | 0.817301 | 3.54E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene24905 | 0.82585 | 3.74E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene24905 | 0.824864 | 6.41E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene24905 | 0.837491 | 5.04E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene24905 | 0.825795 | 3.86E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene24905 | 0.802643 | 5.09E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene24905 | 0.848308 | 6.66E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene24905 | 0.805506 | 1.29E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene24905 | 0.822068 | 2.89E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene24905 | 0.828045 | 1.12E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene24905 | 0.821597 | 3.71E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene24905 | 0.840107 | 1.06E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene24905 | 0.825743 | 3.97E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene24905 | 0.822173 | 2.73E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene24905 | 0.844653 | 6.62E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene24905 | 0.867397 | 1.41E-65 | -1.69E-46 |
| MS.gene050577 | MS.gene24905 | 0.83372 | 4.53E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene24905 | 0.837648 | 4.59E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene24905 | 0.842717 | 2.18E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene24905 | 0.857586 | 1.48E-62 | -1.69E-46 |
| MS.gene050747 | MS.gene24905 | 0.810882 | 9.24E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene24905 | 0.821721 | 3.47E-53 | -1.69E-46 |
| MS.gene050876 | MS.gene24905 | 0.807924 | 3.99E-50 | -1.69E-46 |
| MS.gene05087 | MS.gene24905 | 0.827692 | 1.36E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene24905 | 0.825935 | 3.57E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene24905 | 0.814791 | 1.29E-51 | -1.69E-46 |
| MS.gene050986 | MS.gene24905 | 0.838349 | 3.03E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene24905 | 0.850608 | 1.52E-60 | -1.69E-46 |
| MS.gene051364 | MS.gene24905 | -0.813927 | 2.00E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene24905 | -0.803116 | 4.07E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene24905 | 0.813316 | 2.72E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene24905 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene24905 | 0.823037 | 1.72E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene24905 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene052822 | MS.gene24905 | 0.803287 | 3.75E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene24905 | 0.800711 | 1.27E-48 | -1.69E-46 |
| MS.gene052966 | MS.gene24905 | 0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene053203 | MS.gene24905 | 0.845506 | 3.89E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene24905 | 0.836848 | 7.36E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene24905 | 0.83618 | 1.09E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene24905 | 0.81662 | 5.04E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene24905 | 0.807684 | 4.48E-50 | -1.69E-46 |
| MS.gene054638 | MS.gene24905 | 0.853878 | 1.79E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene24905 | 0.811368 | 7.25E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene24905 | 0.82484 | 6.49E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene24905 | 0.847574 | 1.06E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene24905 | 0.832534 | 8.95E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene24905 | 0.845979 | 2.90E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene24905 | 0.832376 | 9.79E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene24905 | 0.800994 | 1.11E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene24905 | 0.821228 | 4.51E-53 | -1.69E-46 |
| MS.gene056510 | MS.gene24905 | 0.829004 | 6.56E-55 | -1.69E-46 |
| MS.gene056550 | MS.gene24905 | -0.808353 | 3.23E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene24905 | 0.841892 | 3.61E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene24905 | 0.822972 | 1.78E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene24905 | 0.860412 | 2.10E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene24905 | 0.809617 | 1.73E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene24905 | 0.852142 | 5.60E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene24905 | 0.838256 | 3.20E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene24905 | 0.838348 | 3.03E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene24905 | 0.839419 | 1.60E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene24905 | 0.835145 | 1.99E-56 | -1.69E-46 |
| MS.gene05883 | MS.gene24905 | 0.821919 | 3.13E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene24905 | 0.829852 | 4.08E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene24905 | 0.845457 | 4.01E-59 | -1.69E-46 |
| MS.gene059181 | MS.gene24905 | 0.826778 | 2.25E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene24905 | 0.848602 | 5.52E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene24905 | 0.848295 | 6.71E-60 | -1.69E-46 |
| MS.gene059756 | MS.gene24905 | 0.854898 | 9.06E-62 | -1.69E-46 |
| MS.gene059837 | MS.gene24905 | 0.807953 | 3.93E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene24905 | 0.810532 | 1.10E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene24905 | -0.809034 | 2.31E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene24905 | 0.821719 | 3.48E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene24905 | 0.859693 | 3.47E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene24905 | 0.828581 | 8.31E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene24905 | 0.834453 | 2.97E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene24905 | 0.827912 | 1.20E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24905.t1 | MTR_4g011960 | 97.170 | 212 | 6 | 0 | 1 | 212 | 44 | 255 | 5.75e-154 | 427 |
| MS.gene24905.t1 | MTR_2g090045 | 32.692 | 208 | 131 | 3 | 4 | 208 | 59 | 260 | 6.03e-37 | 130 |
| MS.gene24905.t1 | MTR_5g024800 | 36.970 | 165 | 97 | 2 | 47 | 208 | 63 | 223 | 5.96e-36 | 126 |
| MS.gene24905.t1 | MTR_2g090035 | 30.323 | 155 | 90 | 4 | 56 | 208 | 59 | 197 | 9.63e-21 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24905.t1 | AT1G04940 | 70.707 | 198 | 57 | 1 | 15 | 212 | 78 | 274 | 7.12e-105 | 303 |
| MS.gene24905.t1 | AT1G04945 | 67.598 | 179 | 57 | 1 | 15 | 193 | 78 | 255 | 2.07e-85 | 265 |
| MS.gene24905.t1 | AT4G03320 | 34.906 | 212 | 126 | 4 | 2 | 208 | 67 | 271 | 3.98e-40 | 139 |
Find 58 sgRNAs with CRISPR-Local
Find 68 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAAATTGGAATGCATTTC+TGG | 0.102228 | 4.1:+83913406 | MS.gene24905:CDS |
| TTCACCCTTCATATGGTATT+TGG | 0.132090 | 4.1:-83913533 | None:intergenic |
| GATGCCACTGGGGTTCTATT+GGG | 0.221927 | 4.1:+83913383 | MS.gene24905:CDS |
| GGATGCCACTGGGGTTCTAT+TGG | 0.233429 | 4.1:+83913382 | MS.gene24905:CDS |
| GGGTTCTATTGGGGTAAAAT+TGG | 0.263490 | 4.1:+83913393 | MS.gene24905:CDS |
| GAGATAGCCTTGCAAGTTAC+AGG | 0.289946 | 4.1:+83913345 | MS.gene24905:CDS |
| CTTCGCTGCGCAAGTCTTGT+AGG | 0.317793 | 4.1:+83912998 | MS.gene24905:CDS |
| AACTCGAATGCCTCGATAAA+CGG | 0.330825 | 4.1:-83913177 | None:intergenic |
| TGCGTTAGGTGTGCCCTTAC+TGG | 0.339865 | 4.1:+83913468 | MS.gene24905:CDS |
| GGCACACCTAACGCACTCTA+TGG | 0.372183 | 4.1:-83913460 | None:intergenic |
| CTATGGAAGTAAAGAGATAA+AGG | 0.374679 | 4.1:-83913443 | None:intergenic |
| TACATATTTCACCCTTCATA+TGG | 0.376846 | 4.1:-83913540 | None:intergenic |
| TGTGAGCCGTTGGATGCCAC+TGG | 0.406570 | 4.1:+83913371 | MS.gene24905:CDS |
| ACTCGAATGCCTCGATAAAC+GGG | 0.406627 | 4.1:-83913176 | None:intergenic |
| AGTGTTCTCCACCACCATCT+TGG | 0.422947 | 4.1:-83913084 | None:intergenic |
| TTACTTCCATAGAGTGCGTT+AGG | 0.425451 | 4.1:+83913454 | MS.gene24905:CDS |
| TTATCTCTTGCCTATCCATC+AGG | 0.444896 | 4.1:+83913119 | MS.gene24905:CDS |
| GATGGATAGGCAAGAGATAA+GGG | 0.454516 | 4.1:-83913116 | None:intergenic |
| ATGCCACTGGGGTTCTATTG+GGG | 0.470377 | 4.1:+83913384 | MS.gene24905:CDS |
| GTGAGCCGTTGGATGCCACT+GGG | 0.473897 | 4.1:+83913372 | MS.gene24905:CDS |
| TATGCTGCATCACAGACAAA+AGG | 0.482262 | 4.1:-83913507 | None:intergenic |
| TGATGGATAGGCAAGAGATA+AGG | 0.482592 | 4.1:-83913117 | None:intergenic |
| TTCGCTGCGCAAGTCTTGTA+GGG | 0.489910 | 4.1:+83912999 | MS.gene24905:CDS |
| TATATCCAAATACCATATGA+AGG | 0.493979 | 4.1:+83913528 | MS.gene24905:CDS |
| ATGAAGGAAGGCTCATCTGC+TGG | 0.500226 | 4.1:+83913033 | MS.gene24905:CDS |
| TTCAGATTTCACGTTGCCGT+CGG | 0.502375 | 4.1:+83913312 | MS.gene24905:CDS |
| TAGGGCCCCTCGAGCAATGA+AGG | 0.513500 | 4.1:+83913017 | MS.gene24905:CDS |
| CAATTGGCAGTCTACCTAGA+TGG | 0.514868 | 4.1:+83913223 | MS.gene24905:CDS |
| GAGCCTTCCTTCATTGCTCG+AGG | 0.525595 | 4.1:-83913024 | None:intergenic |
| TATCCGCATACATACCAGTA+AGG | 0.527566 | 4.1:-83913482 | None:intergenic |
| AGCCTTCCTTCATTGCTCGA+GGG | 0.536520 | 4.1:-83913023 | None:intergenic |
| ATGCTGCATCACAGACAAAA+GGG | 0.543856 | 4.1:-83913506 | None:intergenic |
| CTACAAGACTTGCGCAGCGA+AGG | 0.549633 | 4.1:-83912997 | None:intergenic |
| TTACAGGGCTTGTGAGCCGT+TGG | 0.554372 | 4.1:+83913361 | MS.gene24905:CDS |
| TAGCATACATCCACACCTGA+TGG | 0.557726 | 4.1:-83913134 | None:intergenic |
| AGATAGCCTTGCAAGTTACA+GGG | 0.572582 | 4.1:+83913346 | MS.gene24905:CDS |
| TACATCCACACCTGATGGAT+AGG | 0.579710 | 4.1:-83913129 | None:intergenic |
| CCAGAAAACCAAGATGGTGG+TGG | 0.582114 | 4.1:+83913076 | MS.gene24905:CDS |
| TATGCTATGAGAGACCATCT+AGG | 0.591244 | 4.1:-83913237 | None:intergenic |
| CACAAGCCCTGTAACTTGCA+AGG | 0.594415 | 4.1:-83913352 | None:intergenic |
| ACGTGAAATCTGAAGAAATG+AGG | 0.595610 | 4.1:-83913303 | None:intergenic |
| TTGCGCAGCGAAGGTAACAC+AGG | 0.597116 | 4.1:-83912988 | None:intergenic |
| TTGCGTATCTTACCATTGTG+AGG | 0.599587 | 4.1:+83913268 | MS.gene24905:CDS |
| GCCTTCCTTCATTGCTCGAG+GGG | 0.601540 | 4.1:-83913022 | None:intergenic |
| TCTTGCCTATCCATCAGGTG+TGG | 0.604602 | 4.1:+83913124 | MS.gene24905:CDS |
| GCCCCTCGAGCAATGAAGGA+AGG | 0.617175 | 4.1:+83913021 | MS.gene24905:CDS |
| CAATCTTCACCCGTTTATCG+AGG | 0.617293 | 4.1:+83913167 | MS.gene24905:CDS |
| ATATCCAAATACCATATGAA+GGG | 0.626189 | 4.1:+83913529 | MS.gene24905:CDS |
| CGATGACCAGAAAACCAAGA+TGG | 0.627736 | 4.1:+83913070 | MS.gene24905:CDS |
| AGAACCCCAGTGGCATCCAA+CGG | 0.641127 | 4.1:-83913377 | None:intergenic |
| CCATTGTGAGGAGAAAAGAA+TGG | 0.645047 | 4.1:+83913280 | MS.gene24905:CDS |
| TGCCCTTACTGGTATGTATG+CGG | 0.645316 | 4.1:+83913479 | MS.gene24905:CDS |
| ATCCGCATACATACCAGTAA+GGG | 0.651307 | 4.1:-83913481 | None:intergenic |
| TGACCAGAAAACCAAGATGG+TGG | 0.673799 | 4.1:+83913073 | MS.gene24905:CDS |
| TGCGCAGCGAAGGTAACACA+GGG | 0.711989 | 4.1:-83912987 | None:intergenic |
| TATCTCGATTAACATTCCGA+CGG | 0.723472 | 4.1:-83913328 | None:intergenic |
| TGAGCCGTTGGATGCCACTG+GGG | 0.729430 | 4.1:+83913373 | MS.gene24905:CDS |
| TTACCCCAATAGAACCCCAG+TGG | 0.740833 | 4.1:-83913387 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATATCCAAATACCATATGAA+GGG | + | chr4.1:83913529-83913548 | MS.gene24905:CDS | 25.0% |
| ! | TATATCCAAATACCATATGA+AGG | + | chr4.1:83913528-83913547 | MS.gene24905:CDS | 25.0% |
| ! | TGCCAATTGACATAAAAAAA+GGG | - | chr4.1:83913212-83913231 | None:intergenic | 25.0% |
| !!! | TACCCTTTTTTTATGTCAAT+TGG | + | chr4.1:83913207-83913226 | MS.gene24905:CDS | 25.0% |
| CTATGGAAGTAAAGAGATAA+AGG | - | chr4.1:83913446-83913465 | None:intergenic | 30.0% | |
| CTGCCAATTGACATAAAAAA+AGG | - | chr4.1:83913213-83913232 | None:intergenic | 30.0% | |
| GTAAAATTGGAATGCATTTC+TGG | + | chr4.1:83913406-83913425 | MS.gene24905:CDS | 30.0% | |
| ACGTGAAATCTGAAGAAATG+AGG | - | chr4.1:83913306-83913325 | None:intergenic | 35.0% | |
| TATCTCGATTAACATTCCGA+CGG | - | chr4.1:83913331-83913350 | None:intergenic | 35.0% | |
| !! | ATCAAGCCTACTTTTAAGTG+GGG | + | chr4.1:83912939-83912958 | MS.gene24905:CDS | 35.0% |
| !! | CATCAAGCCTACTTTTAAGT+GGG | + | chr4.1:83912938-83912957 | MS.gene24905:CDS | 35.0% |
| AACTCGAATGCCTCGATAAA+CGG | - | chr4.1:83913180-83913199 | None:intergenic | 40.0% | |
| ATCCGCATACATACCAGTAA+GGG | - | chr4.1:83913484-83913503 | None:intergenic | 40.0% | |
| ATGCTGCATCACAGACAAAA+GGG | - | chr4.1:83913509-83913528 | None:intergenic | 40.0% | |
| CCATTGTGAGGAGAAAAGAA+TGG | + | chr4.1:83913280-83913299 | MS.gene24905:CDS | 40.0% | |
| GATGGATAGGCAAGAGATAA+GGG | - | chr4.1:83913119-83913138 | None:intergenic | 40.0% | |
| GGGTTCTATTGGGGTAAAAT+TGG | + | chr4.1:83913393-83913412 | MS.gene24905:CDS | 40.0% | |
| TATCCGCATACATACCAGTA+AGG | - | chr4.1:83913485-83913504 | None:intergenic | 40.0% | |
| TATGCTATGAGAGACCATCT+AGG | - | chr4.1:83913240-83913259 | None:intergenic | 40.0% | |
| TATGCTGCATCACAGACAAA+AGG | - | chr4.1:83913510-83913529 | None:intergenic | 40.0% | |
| TTACTTCCATAGAGTGCGTT+AGG | + | chr4.1:83913454-83913473 | MS.gene24905:CDS | 40.0% | |
| TTATCTCTTGCCTATCCATC+AGG | + | chr4.1:83913119-83913138 | MS.gene24905:CDS | 40.0% | |
| TTGCGTATCTTACCATTGTG+AGG | + | chr4.1:83913268-83913287 | MS.gene24905:CDS | 40.0% | |
| TTTGACCCCCACTTAAAAGT+AGG | - | chr4.1:83912948-83912967 | None:intergenic | 40.0% | |
| ! | AGATAGCCTTGCAAGTTACA+GGG | + | chr4.1:83913346-83913365 | MS.gene24905:CDS | 40.0% |
| ! | CCATTCTTTTCTCCTCACAA+TGG | - | chr4.1:83913283-83913302 | None:intergenic | 40.0% |
| ! | TGATGGATAGGCAAGAGATA+AGG | - | chr4.1:83913120-83913139 | None:intergenic | 40.0% |
| !! | CATCTTGGTTTTCTGGTCAT+CGG | - | chr4.1:83913072-83913091 | None:intergenic | 40.0% |
| !! | GCATCAAGCCTACTTTTAAG+TGG | + | chr4.1:83912937-83912956 | MS.gene24905:CDS | 40.0% |
| !! | TCAAGCCTACTTTTAAGTGG+GGG | + | chr4.1:83912940-83912959 | MS.gene24905:CDS | 40.0% |
| ACTCGAATGCCTCGATAAAC+GGG | - | chr4.1:83913179-83913198 | None:intergenic | 45.0% | |
| CAATCTTCACCCGTTTATCG+AGG | + | chr4.1:83913167-83913186 | MS.gene24905:CDS | 45.0% | |
| CAATTGGCAGTCTACCTAGA+TGG | + | chr4.1:83913223-83913242 | MS.gene24905:CDS | 45.0% | |
| CGATGACCAGAAAACCAAGA+TGG | + | chr4.1:83913070-83913089 | MS.gene24905:CDS | 45.0% | |
| TAGCATACATCCACACCTGA+TGG | - | chr4.1:83913137-83913156 | None:intergenic | 45.0% | |
| TGACCAGAAAACCAAGATGG+TGG | + | chr4.1:83913073-83913092 | MS.gene24905:CDS | 45.0% | |
| TGCCCTTACTGGTATGTATG+CGG | + | chr4.1:83913479-83913498 | MS.gene24905:CDS | 45.0% | |
| TTCAGATTTCACGTTGCCGT+CGG | + | chr4.1:83913312-83913331 | MS.gene24905:CDS | 45.0% | |
| ! | GAGATAGCCTTGCAAGTTAC+AGG | + | chr4.1:83913345-83913364 | MS.gene24905:CDS | 45.0% |
| ! | TACATCCACACCTGATGGAT+AGG | - | chr4.1:83913132-83913151 | None:intergenic | 45.0% |
| AGCCTTCCTTCATTGCTCGA+GGG | - | chr4.1:83913026-83913045 | None:intergenic | 50.0% | |
| AGTGTTCTCCACCACCATCT+TGG | - | chr4.1:83913087-83913106 | None:intergenic | 50.0% | |
| ATGAAGGAAGGCTCATCTGC+TGG | + | chr4.1:83913033-83913052 | MS.gene24905:CDS | 50.0% | |
| ATGCCACTGGGGTTCTATTG+GGG | + | chr4.1:83913384-83913403 | MS.gene24905:CDS | 50.0% | |
| GATGCCACTGGGGTTCTATT+GGG | + | chr4.1:83913383-83913402 | MS.gene24905:CDS | 50.0% | |
| TCTTGCCTATCCATCAGGTG+TGG | + | chr4.1:83913124-83913143 | MS.gene24905:CDS | 50.0% | |
| TTACCCCAATAGAACCCCAG+TGG | - | chr4.1:83913390-83913409 | None:intergenic | 50.0% | |
| ! | CACAAGCCCTGTAACTTGCA+AGG | - | chr4.1:83913355-83913374 | None:intergenic | 50.0% |
| ! | CCAGAAAACCAAGATGGTGG+TGG | + | chr4.1:83913076-83913095 | MS.gene24905:CDS | 50.0% |
| ! | TTCGCTGCGCAAGTCTTGTA+GGG | + | chr4.1:83912999-83913018 | MS.gene24905:CDS | 50.0% |
| !! | CCACCACCATCTTGGTTTTC+TGG | - | chr4.1:83913079-83913098 | None:intergenic | 50.0% |
| !! | CTTGGTTTTCTGGTCATCGG+AGG | - | chr4.1:83913069-83913088 | None:intergenic | 50.0% |
| AGAACCCCAGTGGCATCCAA+CGG | - | chr4.1:83913380-83913399 | None:intergenic | 55.0% | |
| CTACAAGACTTGCGCAGCGA+AGG | - | chr4.1:83913000-83913019 | None:intergenic | 55.0% | |
| GAGCCTTCCTTCATTGCTCG+AGG | - | chr4.1:83913027-83913046 | None:intergenic | 55.0% | |
| GCCTTCCTTCATTGCTCGAG+GGG | - | chr4.1:83913025-83913044 | None:intergenic | 55.0% | |
| GGATGCCACTGGGGTTCTAT+TGG | + | chr4.1:83913382-83913401 | MS.gene24905:CDS | 55.0% | |
| GGCACACCTAACGCACTCTA+TGG | - | chr4.1:83913463-83913482 | None:intergenic | 55.0% | |
| TGCGCAGCGAAGGTAACACA+GGG | - | chr4.1:83912990-83913009 | None:intergenic | 55.0% | |
| TGCGTTAGGTGTGCCCTTAC+TGG | + | chr4.1:83913468-83913487 | MS.gene24905:CDS | 55.0% | |
| TTACAGGGCTTGTGAGCCGT+TGG | + | chr4.1:83913361-83913380 | MS.gene24905:CDS | 55.0% | |
| TTGCGCAGCGAAGGTAACAC+AGG | - | chr4.1:83912991-83913010 | None:intergenic | 55.0% | |
| ! | CTTCGCTGCGCAAGTCTTGT+AGG | + | chr4.1:83912998-83913017 | MS.gene24905:CDS | 55.0% |
| GCCCCTCGAGCAATGAAGGA+AGG | + | chr4.1:83913021-83913040 | MS.gene24905:CDS | 60.0% | |
| GTGAGCCGTTGGATGCCACT+GGG | + | chr4.1:83913372-83913391 | MS.gene24905:CDS | 60.0% | |
| TAGGGCCCCTCGAGCAATGA+AGG | + | chr4.1:83913017-83913036 | MS.gene24905:CDS | 60.0% | |
| TGAGCCGTTGGATGCCACTG+GGG | + | chr4.1:83913373-83913392 | MS.gene24905:CDS | 60.0% | |
| TGTGAGCCGTTGGATGCCAC+TGG | + | chr4.1:83913371-83913390 | MS.gene24905:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 83912913 | 83913554 | 83912913 | ID=MS.gene24905 |
| chr4.1 | mRNA | 83912913 | 83913554 | 83912913 | ID=MS.gene24905.t1;Parent=MS.gene24905 |
| chr4.1 | exon | 83912913 | 83913554 | 83912913 | ID=MS.gene24905.t1.exon1;Parent=MS.gene24905.t1 |
| chr4.1 | CDS | 83912913 | 83913554 | 83912913 | ID=cds.MS.gene24905.t1;Parent=MS.gene24905.t1 |
| Gene Sequence |
| Protein sequence |
