Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26605.t1 | XP_013456902.1 | 98.1 | 521 | 4 | 1 | 1 | 515 | 1 | 521 | 3.00E-286 | 993.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26605.t1 | Q6Z6S1 | 59.9 | 509 | 188 | 6 | 8 | 515 | 7 | 500 | 1.4e-162 | 574.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26605.t1 | A0A072UPJ9 | 98.1 | 521 | 4 | 1 | 1 | 515 | 1 | 521 | 2.2e-286 | 993.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene26605 | 0.822249 | 2.62E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene26605 | 0.816835 | 4.51E-52 | -1.69E-46 |
| MS.gene049411 | MS.gene26605 | 0.80724 | 5.57E-50 | -1.69E-46 |
| MS.gene04998 | MS.gene26605 | 0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene050085 | MS.gene26605 | 0.800074 | 1.71E-48 | -1.69E-46 |
| MS.gene050114 | MS.gene26605 | 0.824912 | 6.24E-54 | -1.69E-46 |
| MS.gene050317 | MS.gene26605 | 0.831368 | 1.74E-55 | -1.69E-46 |
| MS.gene050646 | MS.gene26605 | 0.817301 | 3.54E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene26605 | 0.827579 | 1.45E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene26605 | 0.814796 | 1.28E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene26605 | 0.801654 | 8.13E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene26605 | 0.880307 | 6.12E-70 | -1.69E-46 |
| MS.gene051003 | MS.gene26605 | 0.82322 | 1.56E-53 | -1.69E-46 |
| MS.gene051233 | MS.gene26605 | 0.809993 | 1.44E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene26605 | 0.840027 | 1.11E-57 | -1.69E-46 |
| MS.gene051343 | MS.gene26605 | 0.833079 | 6.55E-56 | -1.69E-46 |
| MS.gene051365 | MS.gene26605 | 0.820657 | 6.11E-53 | -1.69E-46 |
| MS.gene051381 | MS.gene26605 | 0.803906 | 2.79E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene26605 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene051850 | MS.gene26605 | 0.810877 | 9.26E-51 | -1.69E-46 |
| MS.gene05188 | MS.gene26605 | 0.810476 | 1.13E-50 | -1.69E-46 |
| MS.gene051902 | MS.gene26605 | 0.832061 | 1.17E-55 | -1.69E-46 |
| MS.gene051903 | MS.gene26605 | 0.824776 | 6.72E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene26605 | 0.824581 | 7.47E-54 | -1.69E-46 |
| MS.gene052072 | MS.gene26605 | 0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene052296 | MS.gene26605 | 0.80251 | 5.42E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene26605 | 0.81091 | 9.11E-51 | -1.69E-46 |
| MS.gene052335 | MS.gene26605 | 0.816072 | 6.68E-52 | -1.69E-46 |
| MS.gene052342 | MS.gene26605 | 0.831992 | 1.22E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene26605 | 0.861031 | 1.36E-63 | -1.69E-46 |
| MS.gene052518 | MS.gene26605 | 0.804916 | 1.72E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene26605 | 0.825339 | 4.95E-54 | -1.69E-46 |
| MS.gene052818 | MS.gene26605 | -0.808506 | 3.00E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene26605 | 0.812675 | 3.76E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene26605 | 0.833028 | 6.75E-56 | -1.69E-46 |
| MS.gene053381 | MS.gene26605 | 0.840984 | 6.25E-58 | -1.69E-46 |
| MS.gene053895 | MS.gene26605 | -0.804364 | 2.24E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene26605 | 0.809067 | 2.27E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene26605 | 0.800817 | 1.21E-48 | -1.69E-46 |
| MS.gene05517 | MS.gene26605 | 0.802295 | 6.00E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene26605 | 0.824477 | 7.90E-54 | -1.69E-46 |
| MS.gene055313 | MS.gene26605 | 0.807433 | 5.07E-50 | -1.69E-46 |
| MS.gene055314 | MS.gene26605 | 0.820247 | 7.59E-53 | -1.69E-46 |
| MS.gene055424 | MS.gene26605 | 0.817603 | 3.03E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene26605 | 0.809269 | 2.06E-50 | -1.69E-46 |
| MS.gene056097 | MS.gene26605 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene26605 | 0.82373 | 1.18E-53 | -1.69E-46 |
| MS.gene056403 | MS.gene26605 | 0.811769 | 5.93E-51 | -1.69E-46 |
| MS.gene056605 | MS.gene26605 | 0.803679 | 3.11E-49 | -1.69E-46 |
| MS.gene056752 | MS.gene26605 | 0.804443 | 2.15E-49 | -1.69E-46 |
| MS.gene056764 | MS.gene26605 | 0.806022 | 1.01E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene26605 | 0.820167 | 7.91E-53 | -1.69E-46 |
| MS.gene056992 | MS.gene26605 | 0.812528 | 4.05E-51 | -1.69E-46 |
| MS.gene057057 | MS.gene26605 | 0.804807 | 1.81E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene26605 | 0.838098 | 3.52E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene26605 | 0.811965 | 5.38E-51 | -1.69E-46 |
| MS.gene057234 | MS.gene26605 | 0.820598 | 6.30E-53 | -1.69E-46 |
| MS.gene057360 | MS.gene26605 | 0.802361 | 5.82E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene26605 | 0.816265 | 6.05E-52 | -1.69E-46 |
| MS.gene057890 | MS.gene26605 | -0.807656 | 4.54E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene26605 | 0.8356 | 1.53E-56 | -1.69E-46 |
| MS.gene058074 | MS.gene26605 | 0.84596 | 2.93E-59 | -1.69E-46 |
| MS.gene058261 | MS.gene26605 | 0.825599 | 4.29E-54 | -1.69E-46 |
| MS.gene058639 | MS.gene26605 | 0.809529 | 1.81E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene26605 | 0.80717 | 5.76E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene26605 | 0.838156 | 3.40E-57 | -1.69E-46 |
| MS.gene059171 | MS.gene26605 | 0.802784 | 4.76E-49 | -1.69E-46 |
| MS.gene059227 | MS.gene26605 | 0.816205 | 6.23E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene26605 | 0.816518 | 5.31E-52 | -1.69E-46 |
| MS.gene06010 | MS.gene26605 | 0.804875 | 1.75E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene26605 | 0.850378 | 1.77E-60 | -1.69E-46 |
| MS.gene060259 | MS.gene26605 | 0.802249 | 6.14E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene26605 | 0.863677 | 2.10E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene26605 | 0.803958 | 2.72E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene26605 | 0.802447 | 5.59E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene26605 | 0.813732 | 2.21E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26605 | MS.gene47554 | PPI |
| MS.gene26605 | MS.gene26426 | PPI |
| MS.gene26605 | MS.gene39554 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26605.t1 | MTR_4g087935 | 98.081 | 521 | 4 | 1 | 1 | 515 | 1 | 521 | 0.0 | 1051 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26605.t1 | AT2G34040 | 68.992 | 516 | 153 | 3 | 1 | 515 | 1 | 510 | 0.0 | 724 |
| MS.gene26605.t1 | AT2G34040 | 68.992 | 516 | 153 | 3 | 1 | 515 | 1 | 510 | 0.0 | 724 |
| MS.gene26605.t1 | AT1G29030 | 66.095 | 525 | 161 | 6 | 1 | 520 | 1 | 513 | 0.0 | 702 |
| MS.gene26605.t1 | AT1G29030 | 63.429 | 525 | 153 | 6 | 1 | 520 | 1 | 491 | 0.0 | 663 |
| MS.gene26605.t1 | AT2G34040 | 69.266 | 436 | 128 | 2 | 1 | 436 | 1 | 430 | 0.0 | 617 |
| MS.gene26605.t1 | AT3G19515 | 45.455 | 253 | 133 | 3 | 240 | 487 | 79 | 331 | 4.43e-59 | 209 |
| MS.gene26605.t1 | AT3G19515 | 47.368 | 133 | 68 | 1 | 12 | 142 | 1 | 133 | 3.48e-31 | 129 |
| MS.gene26605.t1 | AT1G23935 | 35.680 | 412 | 189 | 12 | 87 | 487 | 24 | 370 | 7.01e-56 | 202 |
| MS.gene26605.t1 | AT1G23935 | 35.484 | 341 | 157 | 10 | 87 | 424 | 24 | 304 | 7.44e-44 | 167 |
| MS.gene26605.t1 | AT1G23935 | 35.484 | 341 | 157 | 10 | 87 | 424 | 24 | 304 | 7.58e-44 | 167 |
Find 97 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAGAGTTTGAGCCTATT+TGG | 0.180255 | 4.1:+22406968 | MS.gene26605:CDS |
| TATAGAATTTCGAATGTTTA+TGG | 0.180281 | 4.1:+22406940 | MS.gene26605:CDS |
| AAGTTCTTTCCTGAACTTTC+CGG | 0.262685 | 4.1:+22404904 | MS.gene26605:CDS |
| ATAAGAGAATCAACCTTTCT+TGG | 0.268861 | 4.1:+22411310 | MS.gene26605:CDS |
| TGTGGTTACAAAATTGTTAC+TGG | 0.293298 | 4.1:+22409958 | MS.gene26605:CDS |
| TTGAAGAAGGGTCGAGGTTC+TGG | 0.305212 | 4.1:+22411620 | MS.gene26605:CDS |
| GTGTCGTTCCATTTCCTCTT+GGG | 0.311853 | 4.1:-22406767 | None:intergenic |
| ACTCAATACTCATCTTGATT+TGG | 0.327382 | 4.1:+22404933 | MS.gene26605:CDS |
| TGTTATTCCTGCCAGCTTCC+TGG | 0.336157 | 4.1:+22408030 | MS.gene26605:intron |
| CTTCTTCAATGCAATATTGT+TGG | 0.340511 | 4.1:-22411606 | None:intergenic |
| CAAATAGGCTCAAACTCTTC+AGG | 0.344533 | 4.1:-22406967 | None:intergenic |
| TTTGTAACCACATAAACTAT+TGG | 0.362776 | 4.1:-22409947 | None:intergenic |
| GGCTGAAAACAACAAATCTA+TGG | 0.365544 | 4.1:+22410926 | MS.gene26605:CDS |
| CAGAGTTTAGAAGATGTAAC+TGG | 0.369726 | 4.1:+22406917 | MS.gene26605:intron |
| CATCGTCAAAATATTATTGC+AGG | 0.371200 | 4.1:-22411116 | None:intergenic |
| AAAGTACTTACCACAACAAT+TGG | 0.378420 | 4.1:-22407324 | None:intergenic |
| ATCGAGAAGCTCTACCAATA+TGG | 0.380527 | 4.1:+22404674 | MS.gene26605:CDS |
| TGTGTCGTTCCATTTCCTCT+TGG | 0.385006 | 4.1:-22406768 | None:intergenic |
| TTCAACAGTTCAGCTTTGAT+AGG | 0.395370 | 4.1:-22406742 | None:intergenic |
| TTTAACCTGAGATTTGTCTT+TGG | 0.398392 | 4.1:-22404714 | None:intergenic |
| AAGGATACACCTGAGAATAT+TGG | 0.399203 | 4.1:+22405146 | MS.gene26605:CDS |
| GTTGAAGCCCCAAGAGGAAA+TGG | 0.404679 | 4.1:+22406759 | MS.gene26605:CDS |
| AGTTGAGTTGCTCGCCATAT+TGG | 0.407050 | 4.1:-22404688 | None:intergenic |
| TCTTGTGCAACTTCTTTCCT+CGG | 0.408538 | 4.1:+22405184 | MS.gene26605:CDS |
| TTCAGCAACTGAACAATAGA+AGG | 0.408687 | 4.1:-22408132 | None:intergenic |
| CTCGATGTAAGCAGCTTCTT+CGG | 0.414250 | 4.1:-22404657 | None:intergenic |
| AATATTGTTGGATCCATTGC+CGG | 0.421230 | 4.1:-22411594 | None:intergenic |
| AGTGCAAGACCGGAAAGTTC+AGG | 0.423488 | 4.1:-22404913 | None:intergenic |
| TCGGAAGGTTCAGTAGTCAT+TGG | 0.427839 | 4.1:-22404638 | None:intergenic |
| TGTAAAATTCATCTCTTCTC+CGG | 0.428906 | 4.1:-22409781 | None:intergenic |
| TGCGGTAGTTGATGCAGATT+TGG | 0.429378 | 4.1:-22411343 | None:intergenic |
| CATAAACTATTGGTGGCATT+AGG | 0.430397 | 4.1:-22409937 | None:intergenic |
| TTTGAGCCTATTTGGAGAAA+AGG | 0.433300 | 4.1:+22406976 | MS.gene26605:CDS |
| TACATGACTTGGAAGAAAAC+CGG | 0.437540 | 4.1:+22409762 | MS.gene26605:CDS |
| TGGTTGCTTCTTTCCAAGAA+AGG | 0.448903 | 4.1:-22411323 | None:intergenic |
| TTACTGGTCAGCCATCTGAT+AGG | 0.452743 | 4.1:+22409974 | MS.gene26605:CDS |
| TGCTAAAACTGATGAAGAAA+AGG | 0.453582 | 4.1:+22410953 | MS.gene26605:CDS |
| CAACAATATTGCATTGAAGA+AGG | 0.456268 | 4.1:+22411607 | MS.gene26605:CDS |
| GGAAAGAACTTGAAGAACTT+AGG | 0.456756 | 4.1:-22404892 | None:intergenic |
| ATTTCATCACCTAGCTCAAA+AGG | 0.458193 | 4.1:+22409827 | MS.gene26605:CDS |
| TACTCATCTTGATTTGGTTG+AGG | 0.467134 | 4.1:+22404939 | MS.gene26605:CDS |
| TCTGATGTCTCTGCTGAGGC+AGG | 0.468867 | 4.1:+22405331 | MS.gene26605:CDS |
| AATGCCACCAATAGTTTATG+TGG | 0.470729 | 4.1:+22409940 | MS.gene26605:CDS |
| TAATGTTGAAGAGCAAAATT+CGG | 0.475477 | 4.1:+22406587 | MS.gene26605:CDS |
| CAACTACCGCACCAGCTGTT+GGG | 0.480221 | 4.1:+22411355 | MS.gene26605:CDS |
| ATCAAACAGATCATATTCAT+AGG | 0.483162 | 4.1:+22407274 | MS.gene26605:CDS |
| AGCTCTTCCATACGCTCAGC+TGG | 0.487308 | 4.1:-22407001 | None:intergenic |
| TTTACTTCTGCAGAGCGAAA+CGG | 0.489418 | 4.1:+22411561 | MS.gene26605:intron |
| TAGTTTCTTGATTGTAGCCC+GGG | 0.492094 | 4.1:-22410892 | None:intergenic |
| CTTGTGCAACTTCTTTCCTC+GGG | 0.493032 | 4.1:+22405185 | MS.gene26605:CDS |
| GGATGACCTTAGTCGTGAAA+AGG | 0.497612 | 4.1:+22406608 | MS.gene26605:CDS |
| GTTCGGGTGCAAGCGATAAG+AGG | 0.497959 | 4.1:+22405107 | MS.gene26605:CDS |
| TGGTTGAGGCTGATGAACTC+GGG | 0.499099 | 4.1:+22404953 | MS.gene26605:CDS |
| GATCCATTGCCGGTAGTAGC+CGG | 0.501494 | 4.1:-22411584 | None:intergenic |
| ATGAGTATTGAGTGCAAGAC+CGG | 0.502685 | 4.1:-22404923 | None:intergenic |
| TTCTATTGTTCAGTTGCTGA+AGG | 0.506926 | 4.1:+22408134 | MS.gene26605:CDS |
| GTAACCACATAAACTATTGG+TGG | 0.507469 | 4.1:-22409944 | None:intergenic |
| ACTTTGTTTAAGCACATTCG+TGG | 0.507835 | 4.1:+22406564 | MS.gene26605:CDS |
| GAGCTGCTTGGAATCATTGA+AGG | 0.510702 | 4.1:+22407019 | MS.gene26605:CDS |
| TCAACTACCGCACCAGCTGT+TGG | 0.511656 | 4.1:+22411354 | MS.gene26605:CDS |
| GCGAAACGGCCGGCTACTAC+CGG | 0.515305 | 4.1:+22411575 | MS.gene26605:CDS |
| TTGGTTGAGGCTGATGAACT+CGG | 0.515860 | 4.1:+22404952 | MS.gene26605:CDS |
| TTAGTTTCTTGATTGTAGCC+CGG | 0.527233 | 4.1:-22410893 | None:intergenic |
| TGTCGTTCCATTTCCTCTTG+GGG | 0.527654 | 4.1:-22406766 | None:intergenic |
| AAAGGCTCCAGCTGAGCGTA+TGG | 0.527823 | 4.1:+22406994 | MS.gene26605:CDS |
| CTCTTATCTCCAATAAAAGA+AGG | 0.529752 | 4.1:-22411294 | None:intergenic |
| GAGCGTATGGAAGAGCTGCT+TGG | 0.531459 | 4.1:+22407007 | MS.gene26605:CDS |
| CAAGAAACTAACTCAAGGAA+TGG | 0.535136 | 4.1:+22410905 | MS.gene26605:CDS |
| AACAATATTGCATTGAAGAA+GGG | 0.536121 | 4.1:+22411608 | MS.gene26605:CDS |
| CGGCCGGCTACTACCGGCAA+TGG | 0.538902 | 4.1:+22411581 | MS.gene26605:CDS |
| TCAACAGTTCAGCTTTGATA+GGG | 0.540300 | 4.1:-22406741 | None:intergenic |
| GGTCAGCCATCTGATAGGCT+TGG | 0.540430 | 4.1:+22409979 | MS.gene26605:CDS |
| CATGGCACTTCCAATTGTTG+TGG | 0.547852 | 4.1:+22407314 | MS.gene26605:CDS |
| CTCTTCCAAAGACAAATCTC+AGG | 0.550702 | 4.1:+22404709 | MS.gene26605:CDS |
| CAGAACGTCAAGGATTATCA+AGG | 0.554085 | 4.1:+22404811 | MS.gene26605:intron |
| AAAATACAATACCCAACAGC+TGG | 0.554529 | 4.1:-22411366 | None:intergenic |
| GGTGTATCCTTGCAGAAAAG+AGG | 0.555555 | 4.1:-22405134 | None:intergenic |
| GGAGCGTGATGCTGTGCATA+AGG | 0.570343 | 4.1:+22405307 | MS.gene26605:CDS |
| ATGTAAGCAGCTTCTTCGGA+AGG | 0.580643 | 4.1:-22404653 | None:intergenic |
| AAAACGTTGAGGAGTTCACC+CGG | 0.582162 | 4.1:+22410874 | MS.gene26605:CDS |
| ATTGCATTGAAGAAGGGTCG+AGG | 0.602060 | 4.1:+22411614 | MS.gene26605:CDS |
| GAATCTTGTGGTGTTGTGAA+AGG | 0.604189 | 4.1:-22408096 | None:intergenic |
| ACAATCAAGAAACTAACTCA+AGG | 0.609790 | 4.1:+22410900 | MS.gene26605:CDS |
| CAATTGGAAGTGCCATGTGA+AGG | 0.614103 | 4.1:-22407308 | None:intergenic |
| AAATGAGTAATCACATTGAA+CGG | 0.615862 | 4.1:-22407061 | None:intergenic |
| AAGAAGGGTCGAGGTTCTGG+TGG | 0.621072 | 4.1:+22411623 | MS.gene26605:CDS |
| TGAAAGGTGAAAACTCTGCA+AGG | 0.622969 | 4.1:-22408080 | None:intergenic |
| CTGCTGAGGCAGGATGTGAA+AGG | 0.630646 | 4.1:+22405341 | MS.gene26605:CDS |
| ACAATACCCAACAGCTGGTG+CGG | 0.630788 | 4.1:-22411361 | None:intergenic |
| GTTGATATCATGCCTTCACA+TGG | 0.637100 | 4.1:+22407296 | MS.gene26605:CDS |
| AGGCTCTGATGTCTCTGCTG+AGG | 0.641155 | 4.1:+22405327 | MS.gene26605:CDS |
| TCTTCTCCAAGCCTATCAGA+TGG | 0.644984 | 4.1:-22409985 | None:intergenic |
| AGCATTTGTCGTGAATCTTG+TGG | 0.650972 | 4.1:-22408108 | None:intergenic |
| GGTTGAGGCTGATGAACTCG+GGG | 0.657264 | 4.1:+22404954 | MS.gene26605:CDS |
| TGAACTGTTGAAGCCCCAAG+AGG | 0.674998 | 4.1:+22406753 | MS.gene26605:CDS |
| CTTCTGCAGAGCGAAACGGC+CGG | 0.693152 | 4.1:+22411565 | MS.gene26605:intron |
| AAACGTTGAGGAGTTCACCC+GGG | 0.696711 | 4.1:+22410875 | MS.gene26605:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 22404641 | 22411951 | 22404641 | ID=MS.gene26605 |
| chr4.1 | mRNA | 22404641 | 22411951 | 22404641 | ID=MS.gene26605.t1;Parent=MS.gene26605 |
| chr4.1 | exon | 22404641 | 22404730 | 22404641 | ID=MS.gene26605.t1.exon1;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22404641 | 22404730 | 22404641 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22404814 | 22404975 | 22404814 | ID=MS.gene26605.t1.exon2;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22404814 | 22404975 | 22404814 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22405107 | 22405206 | 22405107 | ID=MS.gene26605.t1.exon3;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22405107 | 22405206 | 22405107 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22405297 | 22405362 | 22405297 | ID=MS.gene26605.t1.exon4;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22405297 | 22405362 | 22405297 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22406553 | 22406653 | 22406553 | ID=MS.gene26605.t1.exon5;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22406553 | 22406653 | 22406553 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22406736 | 22406810 | 22406736 | ID=MS.gene26605.t1.exon6;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22406736 | 22406810 | 22406736 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22406920 | 22407069 | 22406920 | ID=MS.gene26605.t1.exon7;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22406920 | 22407069 | 22406920 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22407261 | 22407335 | 22407261 | ID=MS.gene26605.t1.exon8;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22407261 | 22407335 | 22407261 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22407420 | 22407485 | 22407420 | ID=MS.gene26605.t1.exon9;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22407420 | 22407485 | 22407420 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22408045 | 22408155 | 22408045 | ID=MS.gene26605.t1.exon10;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22408045 | 22408155 | 22408045 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22409759 | 22409848 | 22409759 | ID=MS.gene26605.t1.exon11;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22409759 | 22409848 | 22409759 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22409934 | 22410040 | 22409934 | ID=MS.gene26605.t1.exon12;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22409934 | 22410040 | 22409934 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22410869 | 22410983 | 22410869 | ID=MS.gene26605.t1.exon13;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22410869 | 22410983 | 22410869 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22411079 | 22411144 | 22411079 | ID=MS.gene26605.t1.exon14;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22411079 | 22411144 | 22411079 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22411276 | 22411376 | 22411276 | ID=MS.gene26605.t1.exon15;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22411276 | 22411376 | 22411276 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22411574 | 22411644 | 22411574 | ID=MS.gene26605.t1.exon16;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22411574 | 22411644 | 22411574 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| chr4.1 | exon | 22411911 | 22411951 | 22411911 | ID=MS.gene26605.t1.exon17;Parent=MS.gene26605.t1 |
| chr4.1 | CDS | 22411911 | 22411951 | 22411911 | ID=cds.MS.gene26605.t1;Parent=MS.gene26605.t1 |
| Gene Sequence |
| Protein sequence |
