AlfalfaGEDB | MS.gene30946

M. sativa cultivar XinJiangDaYe / MS.gene30946

KEGG: K11251
GO: GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0032991 GO:0032993 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044815 GO:0046982 GO:0046983 GO:0097159 GO:0110165 GO:1901363
PFAM: PF00125.27 PF16211.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30946.t1	RHN76061.1	97.1	138	4	0	1	138	38	175	3.00E-66	261.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30946.t1	Q2HU68	97.1	138	4	0	1	138	1	138	7.2e-69	261.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30946.t1	G7IHN4	97.1	138	4	0	1	138	1	138	2.2e-66	261.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene30946	0.813242	2.83E-51	-1.69E-46
MS.gene049350	MS.gene30946	0.817286	3.57E-52	-1.69E-46
MS.gene049404	MS.gene30946	0.826114	3.24E-54	-1.69E-46
MS.gene049711	MS.gene30946	0.806512	7.94E-50	-1.69E-46
MS.gene049821	MS.gene30946	0.858835	6.27E-63	-1.69E-46
MS.gene049850	MS.gene30946	0.85451	1.17E-61	-1.69E-46
MS.gene050020	MS.gene30946	0.830823	2.36E-55	-1.69E-46
MS.gene05045	MS.gene30946	0.806124	9.58E-50	-1.69E-46
MS.gene050807	MS.gene30946	0.824834	6.51E-54	-1.69E-46
MS.gene050901	MS.gene30946	0.859672	3.52E-63	-1.69E-46
MS.gene051018	MS.gene30946	0.800602	1.33E-48	-1.69E-46
MS.gene051198	MS.gene30946	0.808309	3.30E-50	-1.69E-46
MS.gene051199	MS.gene30946	0.816844	4.48E-52	-1.69E-46
MS.gene051247	MS.gene30946	0.83451	2.87E-56	-1.69E-46
MS.gene05157	MS.gene30946	0.849333	3.46E-60	-1.69E-46
MS.gene051664	MS.gene30946	0.800398	1.47E-48	-1.69E-46
MS.gene051700	MS.gene30946	0.810859	9.35E-51	-1.69E-46
MS.gene051719	MS.gene30946	0.865063	7.75E-65	-1.69E-46
MS.gene051720	MS.gene30946	0.874115	8.69E-68	-1.69E-46
MS.gene051744	MS.gene30946	0.854342	1.31E-61	-1.69E-46
MS.gene051791	MS.gene30946	0.807157	5.80E-50	-1.69E-46
MS.gene052020	MS.gene30946	0.804486	2.11E-49	-1.69E-46
MS.gene052133	MS.gene30946	0.84946	3.19E-60	-1.69E-46
MS.gene052516	MS.gene30946	0.818662	1.74E-52	-1.69E-46
MS.gene052519	MS.gene30946	0.814066	1.86E-51	-1.69E-46
MS.gene052582	MS.gene30946	0.810424	1.16E-50	-1.69E-46
MS.gene052584	MS.gene30946	0.82946	5.08E-55	-1.69E-46
MS.gene052611	MS.gene30946	0.813198	2.89E-51	-1.69E-46
MS.gene052665	MS.gene30946	0.81676	4.68E-52	-1.69E-46
MS.gene052773	MS.gene30946	0.804197	2.42E-49	-1.69E-46
MS.gene052863	MS.gene30946	0.802199	6.28E-49	-1.69E-46
MS.gene053122	MS.gene30946	0.829392	5.28E-55	-1.69E-46
MS.gene053144	MS.gene30946	0.836318	1.00E-56	-1.69E-46
MS.gene053226	MS.gene30946	0.86527	6.67E-65	-1.69E-46
MS.gene053581	MS.gene30946	0.836337	9.93E-57	-1.69E-46
MS.gene05364	MS.gene30946	0.818475	1.92E-52	-1.69E-46
MS.gene054584	MS.gene30946	0.840759	7.17E-58	-1.69E-46
MS.gene054651	MS.gene30946	0.814955	1.18E-51	-1.69E-46
MS.gene054775	MS.gene30946	0.822285	2.57E-53	-1.69E-46
MS.gene055465	MS.gene30946	0.833401	5.45E-56	-1.69E-46
MS.gene055466	MS.gene30946	0.850089	2.13E-60	-1.69E-46
MS.gene055468	MS.gene30946	0.844073	9.47E-59	-1.69E-46
MS.gene055512	MS.gene30946	0.823458	1.37E-53	-1.69E-46
MS.gene055537	MS.gene30946	0.817844	2.67E-52	-1.69E-46
MS.gene055580	MS.gene30946	-0.823328	1.47E-53	-1.69E-46
MS.gene055694	MS.gene30946	0.818015	2.44E-52	-1.69E-46
MS.gene055818	MS.gene30946	0.800572	1.35E-48	-1.69E-46
MS.gene055890	MS.gene30946	0.804766	1.85E-49	-1.69E-46
MS.gene056005	MS.gene30946	0.808447	3.08E-50	-1.69E-46
MS.gene056050	MS.gene30946	0.849122	3.96E-60	-1.69E-46
MS.gene05608	MS.gene30946	0.839463	1.56E-57	-1.69E-46
MS.gene056215	MS.gene30946	0.832379	9.78E-56	-1.69E-46
MS.gene056308	MS.gene30946	0.865875	4.30E-65	-1.69E-46
MS.gene056366	MS.gene30946	0.848703	5.17E-60	-1.69E-46
MS.gene056507	MS.gene30946	0.801892	7.27E-49	-1.69E-46
MS.gene056595	MS.gene30946	0.818623	1.78E-52	-1.69E-46
MS.gene057314	MS.gene30946	0.824126	9.56E-54	-1.69E-46
MS.gene057444	MS.gene30946	0.826886	2.12E-54	-1.69E-46
MS.gene057446	MS.gene30946	0.803142	4.01E-49	-1.69E-46
MS.gene057915	MS.gene30946	0.840943	6.41E-58	-1.69E-46
MS.gene058216	MS.gene30946	0.810821	9.53E-51	-1.69E-46
MS.gene05847	MS.gene30946	0.813313	2.73E-51	-1.69E-46
MS.gene058625	MS.gene30946	0.81587	7.41E-52	-1.69E-46
MS.gene058636	MS.gene30946	0.802837	4.64E-49	-1.69E-46
MS.gene05894	MS.gene30946	0.832847	7.48E-56	-1.69E-46
MS.gene059015	MS.gene30946	0.800894	1.16E-48	-1.69E-46
MS.gene059084	MS.gene30946	0.818286	2.12E-52	-1.69E-46
MS.gene059625	MS.gene30946	0.814622	1.40E-51	-1.69E-46
MS.gene059842	MS.gene30946	0.816988	4.16E-52	-1.69E-46
MS.gene059937	MS.gene30946	0.804255	2.36E-49	-1.69E-46
MS.gene060355	MS.gene30946	0.819684	1.02E-52	-1.69E-46
MS.gene060429	MS.gene30946	0.857745	1.32E-62	-1.69E-46
MS.gene060519	MS.gene30946	0.845873	3.10E-59	-1.69E-46
MS.gene060587	MS.gene30946	0.854774	9.84E-62	-1.69E-46
MS.gene060603	MS.gene30946	0.801507	8.72E-49	-1.69E-46
MS.gene060803	MS.gene30946	0.804027	2.63E-49	-1.69E-46
MS.gene061176	MS.gene30946	0.822509	2.28E-53	-1.69E-46
MS.gene061177	MS.gene30946	0.822567	2.21E-53	-1.69E-46
MS.gene061178	MS.gene30946	0.822645	2.12E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30946.t1	MTR_2g096610	97.297	148	4	0	1	148	1	148	1.57e-100	285
MS.gene30946.t1	MTR_4g063280	90.909	132	11	1	18	148	14	145	1.36e-79	232
MS.gene30946.t1	MTR_4g071150	86.842	152	16	2	1	148	1	152	1.14e-78	229
MS.gene30946.t1	MTR_4g064005	87.333	150	15	2	1	148	1	148	4.55e-78	228
MS.gene30946.t1	MTR_2g096570	87.023	131	13	1	22	148	23	153	1.28e-76	224
MS.gene30946.t1	MTR_4g064967	91.339	127	9	1	22	148	24	148	1.50e-76	224
MS.gene30946.t1	MTR_4g063410	84.000	150	20	2	1	148	1	148	6.11e-75	220
MS.gene30946.t1	MTR_7g113160	81.061	132	25	0	9	140	13	144	2.27e-74	218
MS.gene30946.t1	MTR_8g086640	89.394	132	12	1	1	130	1	132	7.83e-72	212
MS.gene30946.t1	MTR_7g093910	73.810	126	31	1	2	127	4	127	1.05e-60	184
MS.gene30946.t1	MTR_7g108320	74.400	125	29	1	3	127	6	127	3.64e-60	182
MS.gene30946.t1	MTR_7g114060	73.810	126	29	2	3	127	2	124	1.22e-59	181
MS.gene30946.t1	MTR_7g114040	73.810	126	29	2	3	127	2	124	1.22e-59	181
MS.gene30946.t1	MTR_2g082510	78.378	111	24	0	17	127	11	121	5.13e-59	179
MS.gene30946.t1	MTR_2g082220	79.630	108	22	0	20	127	14	121	2.02e-58	177
MS.gene30946.t1	MTR_6g005150	65.354	127	30	3	22	147	26	139	1.71e-50	158
MS.gene30946.t1	MTR_7g114050	61.029	136	42	2	5	140	4	128	4.62e-47	149
MS.gene30946.t1	MTR_4g063300	74.286	105	22	1	43	147	10	109	1.88e-45	144
MS.gene30946.t1	MTR_1g011750	60.177	113	43	2	19	130	23	134	6.88e-37	123
MS.gene30946.t1	MTR_1g011850	60.177	113	43	2	19	130	23	134	6.88e-37	123
MS.gene30946.t1	MTR_1g114050	57.983	119	48	2	9	126	10	127	9.52e-37	123
MS.gene30946.t1	MTR_1g071040	62.500	104	37	2	24	126	28	130	2.59e-35	119
MS.gene30946.t1	MTR_1g069770	48.958	96	48	1	43	137	9	104	4.63e-25	92.4
MS.gene30946.t1	MTR_4g048490	43.810	105	30	2	22	126	26	101	8.60e-17	71.2
MS.gene30946.t1	MTR_7g010440	70.588	51	15	0	76	126	122	172	1.52e-16	74.7
MS.gene30946.t1	MTR_4g005910	74.419	43	11	0	85	127	4	46	2.31e-16	68.9
MS.gene30946.t1	MTR_7g027610	41.818	110	38	3	18	126	10	94	1.02e-15	68.9
MS.gene30946.t1	MTR_2g096590	75.000	40	10	0	108	147	12	51	6.54e-14	62.4
MS.gene30946.t1	MTR_0653s0030	54.545	55	25	0	53	107	43	97	3.49e-12	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30946.t1	AT5G02560	82.353	153	22	2	1	148	1	153	9.32e-80	233
MS.gene30946.t1	AT5G27670	77.551	147	32	1	2	148	5	150	5.26e-76	223
MS.gene30946.t1	AT5G02560	71.186	177	22	3	1	148	1	177	9.44e-75	221
MS.gene30946.t1	AT5G59870	72.667	150	39	1	1	148	1	150	5.48e-73	215
MS.gene30946.t1	AT1G51060	80.180	111	22	0	17	127	11	121	2.29e-60	182
MS.gene30946.t1	AT1G08880	72.800	125	30	1	7	127	3	127	9.11e-59	179
MS.gene30946.t1	AT4G27230	77.477	111	25	0	17	127	11	121	1.28e-58	178
MS.gene30946.t1	AT4G27230	77.477	111	25	0	17	127	11	121	1.28e-58	178
MS.gene30946.t1	AT5G54640	78.378	111	24	0	17	127	11	121	1.65e-58	178
MS.gene30946.t1	AT1G54690	73.770	122	28	1	10	127	6	127	2.29e-58	178
MS.gene30946.t1	AT3G20670	77.477	111	25	0	17	127	11	121	2.84e-58	177
MS.gene30946.t1	AT2G38810	59.292	113	44	2	15	126	21	132	7.64e-37	123
MS.gene30946.t1	AT2G38810	59.292	113	44	2	15	126	21	132	7.64e-37	123
MS.gene30946.t1	AT2G38810	59.292	113	44	2	15	126	21	132	7.64e-37	123
MS.gene30946.t1	AT2G38810	59.292	113	44	2	15	126	21	132	7.64e-37	123
MS.gene30946.t1	AT1G52740	62.857	105	37	2	23	126	27	130	1.35e-35	120
MS.gene30946.t1	AT3G54560	58.716	109	43	2	23	130	29	136	1.92e-34	117
MS.gene30946.t1	AT3G54560	58.716	109	43	2	23	130	29	136	1.92e-34	117
MS.gene30946.t1	AT4G13570	48.913	92	45	2	30	120	28	118	1.65e-20	81.3
MS.gene30946.t1	AT4G13570	48.352	91	45	2	31	120	35	124	4.62e-20	80.5

Find 47 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGTCACTGCCTTCTTCCT+TGG	0.238367	2.2:+5476543	None:intergenic
CTAAGCCTTCTTTGGAGATT+TGG	0.253652	2.2:+5476078	None:intergenic
GAAGCCTTCTCATTCTTCTT+AGG	0.258486	2.2:+5476130	None:intergenic
AACTAAATCTAAGCCTTCTT+TGG	0.259152	2.2:+5476070	None:intergenic
TTCTTCTTAGGTAAAAGAAT+TGG	0.279364	2.2:+5476142	None:intergenic
GGTAGCCTTGGATGGAGATT+TGG	0.359896	2.2:+5476099	None:intergenic
AAAAGAATTGGGTTGATGTT+TGG	0.366899	2.2:+5476154	None:intergenic
ACCAGCTCCCTTCTTCGTCT+TGG	0.372930	2.2:+5476581	None:intergenic
CTTTGGAGATTTGGTAGCCT+TGG	0.379306	2.2:+5476087	None:intergenic
AGAACAGCAGCTAGGTAAAC+AGG	0.386139	2.2:+5476429	None:intergenic
AAGGGAGCTGGTGGAAGGAA+AGG	0.395526	2.2:-5476570	MS.gene30946:CDS
CAATTTCCAGTTGGAAGAAT+CGG	0.397925	2.2:-5476501	MS.gene30946:CDS
TCTTCTTAGGTAAAAGAATT+GGG	0.411045	2.2:+5476143	None:intergenic
TTGTGTTCAGGTTCTTGAAT+TGG	0.420978	2.2:-5476305	MS.gene30946:intron
TACGCTCAGCGTGTTGGTAC+TGG	0.452334	2.2:-5476456	MS.gene30946:CDS
CACGTGACAACAAGAAGAAC+AGG	0.464610	2.2:-5476270	MS.gene30946:CDS
TGGAAATTGAAGACCAGCTC+TGG	0.468882	2.2:+5476515	None:intergenic
TAACGACCGATTCTTCCAAC+TGG	0.472426	2.2:+5476495	None:intergenic
GTTCAGGTTCTTGAATTGGC+TGG	0.491391	2.2:-5476301	MS.gene30946:intron
CATCCCTAGGCATTTGCTGT+TGG	0.495579	2.2:-5476245	MS.gene30946:CDS
GAAAGGAGGTCCAAGGAAGA+AGG	0.497415	2.2:-5476553	MS.gene30946:CDS
CGCAAGCACCAAGACGAAGA+AGG	0.504301	2.2:-5476589	MS.gene30946:CDS
GAACTTGGAAAGTTGCTAGC+TGG	0.514674	2.2:-5476205	MS.gene30946:CDS
ATCGGTCGTTACTTGAAGAA+AGG	0.516352	2.2:-5476483	MS.gene30946:CDS
GGCTACCAAATCTCCAAAGA+AGG	0.519492	2.2:-5476083	MS.gene30946:CDS
GGAGATTTGGTAGCCTTGGA+TGG	0.524077	2.2:+5476091	None:intergenic
GTGAGGAATGATGAAGAACT+TGG	0.529342	2.2:-5476220	MS.gene30946:CDS
ACCAAGACGAAGAAGGGAGC+TGG	0.554503	2.2:-5476582	MS.gene30946:CDS
TTTACCTAAGAAGAATGAGA+AGG	0.555333	2.2:-5476134	MS.gene30946:CDS
CGAAGAAGGGAGCTGGTGGA+AGG	0.557443	2.2:-5476575	MS.gene30946:CDS
GCAAGCACCAAGACGAAGAA+GGG	0.557656	2.2:-5476588	MS.gene30946:CDS
TCTTGAATATCTTGCTGCTG+AGG	0.561765	2.2:-5476409	MS.gene30946:intron
AAATTGAAGACCAGCTCTGG+TGG	0.562253	2.2:+5476518	None:intergenic
GTGACAAGATCCACCAGAGC+TGG	0.565492	2.2:-5476528	MS.gene30946:CDS
ACTGCCAACAGCAAATGCCT+AGG	0.578012	2.2:+5476241	None:intergenic
GGAAGATACGCTCAGCGTGT+TGG	0.585684	2.2:-5476462	MS.gene30946:CDS
TGCTACCAAATCTCCATCCA+AGG	0.591170	2.2:-5476104	MS.gene30946:CDS
GCTGGTCTTCAATTTCCAGT+TGG	0.598252	2.2:-5476510	MS.gene30946:CDS
GATATTCAAGAACAGCAGCT+AGG	0.600688	2.2:+5476421	None:intergenic
GGAGCTGGTGGAAGGAAAGG+AGG	0.602867	2.2:-5476567	MS.gene30946:CDS
GGCATTTGCTGTTGGCAGTG+AGG	0.603106	2.2:-5476237	MS.gene30946:CDS
CTGCCAACAGCAAATGCCTA+GGG	0.606589	2.2:+5476242	None:intergenic
AAGACGAAGAAGGGAGCTGG+TGG	0.607040	2.2:-5476579	MS.gene30946:CDS
AGAAGAACAGGATCATCCCT+AGG	0.619121	2.2:-5476258	MS.gene30946:CDS
GTGGAAGGAAAGGAGGTCCA+AGG	0.640933	2.2:-5476560	MS.gene30946:CDS
GCTGGAGTTACAATTGCACA+TGG	0.698871	2.2:-5476187	MS.gene30946:CDS
GGAGTTACAATTGCACATGG+TGG	0.781867	2.2:-5476184	MS.gene30946:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTCAATTTCATCAAAATT+AGG	+	chr2.2:5476342-5476361	None:intergenic	15.0%
!!	TTTCAATTTCATCAAAATTA+GGG	+	chr2.2:5476341-5476360	None:intergenic	15.0%
!!	CAAATTTGAAAATCAAAAGA+GGG	+	chr2.2:5476309-5476328	None:intergenic	20.0%
!!	TCAAATTTGAAAATCAAAAG+AGG	+	chr2.2:5476310-5476329	None:intergenic	20.0%
!	TCTTCTTAGGTAAAAGAATT+GGG	+	chr2.2:5476532-5476551	None:intergenic	25.0%
!	TTCTTCTTAGGTAAAAGAAT+TGG	+	chr2.2:5476533-5476552	None:intergenic	25.0%
!!!	TTGAAATTTGATTTGTGTTC+AGG	-	chr2.2:5476355-5476374	MS.gene30946:intron	25.0%
	TTTACCTAAGAAGAATGAGA+AGG	-	chr2.2:5476538-5476557	MS.gene30946:CDS	30.0%
!!	AAAAGAATTGGGTTGATGTT+TGG	+	chr2.2:5476521-5476540	None:intergenic	30.0%
	CAATTTCCAGTTGGAAGAAT+CGG	-	chr2.2:5476171-5476190	MS.gene30946:CDS	35.0%
!	TTGTGTTCAGGTTCTTGAAT+TGG	-	chr2.2:5476367-5476386	MS.gene30946:intron	35.0%
	ATCGGTCGTTACTTGAAGAA+AGG	-	chr2.2:5476189-5476208	MS.gene30946:CDS	40.0%
	GAAGCCTTCTCATTCTTCTT+AGG	+	chr2.2:5476545-5476564	None:intergenic	40.0%
	GATATTCAAGAACAGCAGCT+AGG	+	chr2.2:5476254-5476273	None:intergenic	40.0%
	GTGAGGAATGATGAAGAACT+TGG	-	chr2.2:5476452-5476471	MS.gene30946:CDS	40.0%
	TCTTGAATATCTTGCTGCTG+AGG	-	chr2.2:5476263-5476282	MS.gene30946:CDS	40.0%
!	CTAAGCCTTCTTTGGAGATT+TGG	+	chr2.2:5476597-5476616	None:intergenic	40.0%
	AGAACAGCAGCTAGGTAAAC+AGG	+	chr2.2:5476246-5476265	None:intergenic	45.0%
	AGAAGAACAGGATCATCCCT+AGG	-	chr2.2:5476414-5476433	MS.gene30946:CDS	45.0%
	CACGTGACAACAAGAAGAAC+AGG	-	chr2.2:5476402-5476421	MS.gene30946:intron	45.0%
	GAACTTGGAAAGTTGCTAGC+TGG	-	chr2.2:5476467-5476486	MS.gene30946:CDS	45.0%
	GCTGGAGTTACAATTGCACA+TGG	-	chr2.2:5476485-5476504	MS.gene30946:CDS	45.0%
	GGAGTTACAATTGCACATGG+TGG	-	chr2.2:5476488-5476507	MS.gene30946:CDS	45.0%
	GGCTACCAAATCTCCAAAGA+AGG	-	chr2.2:5476589-5476608	MS.gene30946:CDS	45.0%
	TGCTACCAAATCTCCATCCA+AGG	-	chr2.2:5476568-5476587	MS.gene30946:CDS	45.0%
	TGGAAATTGAAGACCAGCTC+TGG	+	chr2.2:5476160-5476179	None:intergenic	45.0%
!	AAATTGAAGACCAGCTCTGG+TGG	+	chr2.2:5476157-5476176	None:intergenic	45.0%
!	CTTTGGAGATTTGGTAGCCT+TGG	+	chr2.2:5476588-5476607	None:intergenic	45.0%
!	GTTCAGGTTCTTGAATTGGC+TGG	-	chr2.2:5476371-5476390	MS.gene30946:intron	45.0%
!	TAACGACCGATTCTTCCAAC+TGG	+	chr2.2:5476180-5476199	None:intergenic	45.0%
!!	GCTGGTCTTCAATTTCCAGT+TGG	-	chr2.2:5476162-5476181	MS.gene30946:CDS	45.0%
	ACTGCCAACAGCAAATGCCT+AGG	+	chr2.2:5476434-5476453	None:intergenic	50.0%
	CTGCCAACAGCAAATGCCTA+GGG	+	chr2.2:5476433-5476452	None:intergenic	50.0%
	CTTGTCACTGCCTTCTTCCT+TGG	+	chr2.2:5476132-5476151	None:intergenic	50.0%
	GAAAGGAGGTCCAAGGAAGA+AGG	-	chr2.2:5476119-5476138	MS.gene30946:CDS	50.0%
	GCAAGCACCAAGACGAAGAA+GGG	-	chr2.2:5476084-5476103	MS.gene30946:CDS	50.0%
!	GGAGATTTGGTAGCCTTGGA+TGG	+	chr2.2:5476584-5476603	None:intergenic	50.0%
!	GGTAGCCTTGGATGGAGATT+TGG	+	chr2.2:5476576-5476595	None:intergenic	50.0%
!!	CATCCCTAGGCATTTGCTGT+TGG	-	chr2.2:5476427-5476446	MS.gene30946:CDS	50.0%
	AAGACGAAGAAGGGAGCTGG+TGG	-	chr2.2:5476093-5476112	MS.gene30946:CDS	55.0%
	AAGGGAGCTGGTGGAAGGAA+AGG	-	chr2.2:5476102-5476121	MS.gene30946:CDS	55.0%
	ACCAAGACGAAGAAGGGAGC+TGG	-	chr2.2:5476090-5476109	MS.gene30946:CDS	55.0%
	ACCAGCTCCCTTCTTCGTCT+TGG	+	chr2.2:5476094-5476113	None:intergenic	55.0%
	CGCAAGCACCAAGACGAAGA+AGG	-	chr2.2:5476083-5476102	MS.gene30946:CDS	55.0%
	GGAAGATACGCTCAGCGTGT+TGG	-	chr2.2:5476210-5476229	MS.gene30946:CDS	55.0%
	GTGACAAGATCCACCAGAGC+TGG	-	chr2.2:5476144-5476163	MS.gene30946:CDS	55.0%
	GTGGAAGGAAAGGAGGTCCA+AGG	-	chr2.2:5476112-5476131	MS.gene30946:CDS	55.0%
!	TACGCTCAGCGTGTTGGTAC+TGG	-	chr2.2:5476216-5476235	MS.gene30946:CDS	55.0%
!!	GGCATTTGCTGTTGGCAGTG+AGG	-	chr2.2:5476435-5476454	MS.gene30946:CDS	55.0%
	CGAAGAAGGGAGCTGGTGGA+AGG	-	chr2.2:5476097-5476116	MS.gene30946:CDS	60.0%
	GGAGCTGGTGGAAGGAAAGG+AGG	-	chr2.2:5476105-5476124	MS.gene30946:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.2	gene	5476078	5476616	5476078	ID=MS.gene30946
chr2.2	mRNA	5476078	5476616	5476078	ID=MS.gene30946.t1;Parent=MS.gene30946
chr2.2	exon	5476410	5476616	5476410	ID=MS.gene30946.t1.exon1;Parent=MS.gene30946.t1
chr2.2	CDS	5476410	5476616	5476410	ID=cds.MS.gene30946.t1;Parent=MS.gene30946.t1
chr2.2	exon	5476078	5476317	5476078	ID=MS.gene30946.t1.exon2;Parent=MS.gene30946.t1
chr2.2	CDS	5476078	5476317	5476078	ID=cds.MS.gene30946.t1;Parent=MS.gene30946.t1

Gene Sequence

>MS.gene30946

ATGGACGCAAGCACCAAGACGAAGAAGGGAGCTGGTGGAAGGAAAGGAGGTCCAAGGAAGAAGGCAGTGACAAGATCCACCAGAGCTGGTCTTCAATTTCCAGTTGGAAGAATCGGTCGTTACTTGAAGAAAGGAAGATACGCTCAGCGTGTTGGTACTGGTGCTCCTGTTTACCTAGCTGCTGTTCTTGAATATCTTGCTGCTGAGGTATATCTCAATTTCAATTTTCCCTCTTTTGATTTTCAAATTTGAAATTCAAACCCTAATTTTGATGAAATTGAAATTTGATTTGTGTTCAGGTTCTTGAATTGGCTGGAAATGCTGCACGTGACAACAAGAAGAACAGGATCATCCCTAGGCATTTGCTGTTGGCAGTGAGGAATGATGAAGAACTTGGAAAGTTGCTAGCTGGAGTTACAATTGCACATGGTGGTGTTCTTCCAAACATCAACCCAATTCTTTTACCTAAGAAGAATGAGAAGGCTTCAACTGCTACCAAATCTCCATCCAAGGCTACCAAATCTCCAAAGAAGGCTTAG

Protein sequence

>MS.gene30946.t1

MDASTKTKKGAGGRKGGPRKKAVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKASTATKSPSKATKSPKKA