AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34032

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34032.t1 MTR_4g059390 83.803 284 46 0 1 284 1 284 1.49e-177 491
MS.gene34032.t1 MTR_7g101190 81.185 287 54 0 1 287 1 287 8.94e-173 479
MS.gene34032.t1 MTR_2g094270 77.972 286 61 2 1 284 1 286 1.12e-166 463
MS.gene34032.t1 MTR_3g118010 79.705 271 49 1 16 286 14 278 8.98e-155 433
MS.gene34032.t1 MTR_1g095070 100.000 199 0 0 89 287 23 221 1.24e-143 402
MS.gene34032.t1 MTR_2g094270 77.600 250 54 2 1 248 1 250 2.91e-142 401
MS.gene34032.t1 MTR_4g415300 72.374 257 65 1 16 272 33 283 1.88e-136 387
MS.gene34032.t1 MTR_8g098375 71.923 260 66 2 14 272 27 280 1.19e-135 385
MS.gene34032.t1 MTR_5g082070 71.910 267 68 3 7 272 23 283 3.52e-135 384
MS.gene34032.t1 MTR_5g010150 70.943 265 70 2 14 277 27 285 1.41e-134 382
MS.gene34032.t1 MTR_3g070210 69.373 271 76 2 3 272 19 283 3.80e-134 381
MS.gene34032.t1 MTR_4g059390 82.673 202 35 0 1 202 1 202 7.92e-122 347
MS.gene34032.t1 MTR_3g070210 68.400 250 72 2 3 251 19 262 4.90e-119 342
MS.gene34032.t1 MTR_1g095070 100.000 160 0 0 89 248 23 182 1.21e-113 325
MS.gene34032.t1 MTR_8g098375 64.904 208 64 3 15 219 28 229 3.40e-89 265
MS.gene34032.t1 MTR_4g415300 68.984 187 52 1 16 202 33 213 1.01e-87 261
MS.gene34032.t1 MTR_3g070210 65.672 201 62 2 3 202 19 213 4.07e-87 259
MS.gene34032.t1 MTR_5g010150 68.783 189 52 2 15 202 28 210 3.78e-86 257
MS.gene34032.t1 MTR_2g101370 37.553 237 124 6 39 270 20 237 4.46e-35 127
MS.gene34032.t1 MTR_1g077540 36.402 239 124 7 39 270 21 238 6.51e-35 127
MS.gene34032.t1 MTR_1g115405 38.525 244 134 7 30 272 12 240 2.21e-33 122
MS.gene34032.t1 MTR_8g013680 37.083 240 113 6 39 266 19 232 1.47e-32 120
MS.gene34032.t1 MTR_7g103030 34.711 242 141 5 30 270 12 237 7.68e-32 119
MS.gene34032.t1 MTR_4g063090 37.344 241 126 7 44 278 26 247 1.75e-31 117
MS.gene34032.t1 MTR_1g006490 35.600 250 129 9 30 271 10 235 4.96e-31 116
MS.gene34032.t1 MTR_6g069040 37.179 234 129 6 39 270 21 238 1.30e-30 115
MS.gene34032.t1 MTR_5g012810 37.118 229 127 5 39 266 19 231 6.05e-30 113
MS.gene34032.t1 MTR_1g006590 34.263 251 130 9 30 271 10 234 1.11e-29 113
MS.gene34032.t1 MTR_7g023350 37.339 233 130 6 39 270 21 238 4.81e-29 111
MS.gene34032.t1 MTR_8g087710 27.536 276 165 7 1 269 1 248 4.28e-20 87.8
MS.gene34032.t1 MTR_2g017660 29.487 234 138 6 39 269 39 248 4.83e-20 87.8
MS.gene34032.t1 MTR_5g079570 29.694 229 143 5 41 269 38 248 1.88e-18 83.2
MS.gene34032.t1 MTR_2g060360 31.890 254 131 9 30 270 11 235 2.45e-18 82.8
MS.gene34032.t1 MTR_5g063930 29.897 194 123 4 78 269 65 247 2.77e-18 82.8
MS.gene34032.t1 MTR_3g008920 30.846 201 119 5 76 272 53 237 3.26e-18 82.4
MS.gene34032.t1 MTR_4g084880 27.234 235 144 5 39 269 35 246 1.06e-17 81.3
MS.gene34032.t1 MTR_2g017620 27.660 235 145 6 37 269 22 233 9.01e-17 78.6
MS.gene34032.t1 MTR_2g017620 27.660 235 145 6 37 269 36 247 1.06e-16 78.6
MS.gene34032.t1 MTR_4g075570 31.694 183 109 8 92 261 95 274 2.16e-16 78.2
MS.gene34032.t1 MTR_8g087720 25.969 258 160 6 15 269 18 247 3.03e-16 77.0
MS.gene34032.t1 MTR_2g017590 27.542 236 144 6 37 269 34 245 5.14e-16 76.6
MS.gene34032.t1 MTR_4g075590 25.000 272 177 8 4 261 2 260 2.18e-15 75.5
MS.gene34032.t1 MTR_2g017610 30.208 192 114 5 82 269 72 247 9.03e-15 73.2
MS.gene34032.t1 MTR_2g017570 28.796 191 118 4 82 269 72 247 1.72e-14 72.4
MS.gene34032.t1 MTR_2g104940 28.111 217 134 6 43 259 84 278 3.82e-14 71.6
MS.gene34032.t1 MTR_2g017620 28.889 180 112 4 92 269 1 166 7.78e-14 68.9
MS.gene34032.t1 MTR_7g010650 26.693 251 154 6 37 283 35 259 1.25e-13 69.7
MS.gene34032.t1 MTR_4g006730 25.185 270 161 8 21 282 68 304 2.42e-13 69.3
MS.gene34032.t1 MTR_1g070385 25.105 239 147 6 36 269 59 270 7.57e-12 65.9
MS.gene34032.t1 MTR_4g006730 26.540 211 134 5 80 282 20 217 4.29e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34032.t1 AT2G37170 83.275 287 46 1 1 287 44 328 1.69e-178 495
MS.gene34032.t1 AT2G37170 83.275 287 46 1 1 287 1 285 8.83e-178 491
MS.gene34032.t1 AT3G53420 82.230 287 51 0 1 287 1 287 6.98e-176 487
MS.gene34032.t1 AT3G53420 82.230 287 51 0 1 287 1 287 6.98e-176 487
MS.gene34032.t1 AT2G37180 82.230 287 49 1 1 287 1 285 8.44e-175 484
MS.gene34032.t1 AT3G54820 82.230 287 50 1 1 287 1 286 5.00e-174 482
MS.gene34032.t1 AT2G39010 78.521 284 60 1 1 284 1 283 1.64e-167 466
MS.gene34032.t1 AT5G60660 79.859 283 57 0 1 283 1 283 2.20e-167 466
MS.gene34032.t1 AT2G16850 79.715 281 50 2 6 286 4 277 2.04e-159 445
MS.gene34032.t1 AT4G35100 77.305 282 57 2 6 286 4 279 9.77e-156 436
MS.gene34032.t1 AT4G35100 77.305 282 57 2 6 286 4 279 9.77e-156 436
MS.gene34032.t1 AT4G00430 74.131 259 61 1 14 272 28 280 4.77e-140 396
MS.gene34032.t1 AT2G45960 72.587 259 65 1 14 272 27 279 2.25e-136 387
MS.gene34032.t1 AT4G23400 74.517 259 60 1 14 272 28 280 1.59e-131 375
MS.gene34032.t1 AT1G01620 73.745 259 62 1 14 272 27 279 2.89e-131 374
MS.gene34032.t1 AT3G61430 72.587 259 65 1 14 272 27 279 6.72e-129 368
MS.gene34032.t1 AT3G61430 72.587 259 65 1 14 272 27 279 6.72e-129 368
MS.gene34032.t1 AT2G45960 72.766 235 58 1 14 248 27 255 1.05e-121 349
MS.gene34032.t1 AT2G45960 72.766 235 58 1 14 248 27 255 9.82e-121 348
MS.gene34032.t1 AT1G01620 77.073 205 47 0 68 272 3 207 1.24e-113 327
MS.gene34032.t1 AT2G39010 76.733 202 46 1 1 202 1 201 3.34e-112 323
MS.gene34032.t1 AT4G00430 70.466 193 51 1 14 206 28 214 7.88e-92 271
MS.gene34032.t1 AT3G26520 38.618 246 127 8 30 270 13 239 3.37e-35 127
MS.gene34032.t1 AT3G16240 39.574 235 114 7 39 266 19 232 2.81e-33 122
MS.gene34032.t1 AT1G73190 36.842 247 137 7 29 270 14 246 5.89e-33 122
MS.gene34032.t1 AT2G36830 37.860 243 127 9 30 267 12 235 8.81e-33 121
MS.gene34032.t1 AT5G47450 38.559 236 121 7 36 266 16 232 1.78e-32 120
MS.gene34032.t1 AT1G17810 35.743 249 137 7 29 270 14 246 5.24e-32 119
MS.gene34032.t1 AT4G01470 35.918 245 133 6 31 270 13 238 2.89e-31 117
MS.gene34032.t1 AT2G25810 34.298 242 139 6 30 270 10 232 2.08e-29 112
MS.gene34032.t1 AT4G17340 35.573 253 132 8 39 286 19 245 2.95e-28 109
MS.gene34032.t1 AT3G47440 33.191 235 136 7 39 270 23 239 7.19e-25 100
MS.gene34032.t1 AT4G19030 28.016 257 165 5 16 269 32 271 1.20e-19 87.0
MS.gene34032.t1 AT5G37820 28.326 233 142 7 39 269 43 252 6.19e-16 76.6
MS.gene34032.t1 AT5G37820 28.326 233 142 7 39 269 79 288 7.19e-16 76.6
MS.gene34032.t1 AT4G18910 26.800 250 161 6 25 269 36 268 1.14e-14 73.2
MS.gene34032.t1 AT1G80760 27.632 228 143 6 36 263 77 282 1.30e-14 73.2
MS.gene34032.t1 AT2G34390 27.007 274 163 8 3 269 20 263 1.30e-14 72.8
MS.gene34032.t1 AT1G31885 27.234 235 143 6 32 259 36 249 1.70e-13 70.1
MS.gene34032.t1 AT2G34390 30.151 199 119 6 78 269 36 221 4.60e-13 67.8
MS.gene34032.t1 AT1G31885 28.571 189 116 4 78 259 19 195 1.27e-12 67.0
MS.gene34032.t1 AT5G37810 26.724 232 147 6 39 269 43 252 2.10e-12 66.6
MS.gene34032.t1 AT3G06100 29.876 241 128 11 39 269 46 255 2.32e-11 63.2

Find 79 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGCACTGCTGGAATTTC+AGG 0.116467 1.4:+74026676 MS.gene34032:CDS
CTTGGTATTGCTTGGGCTTT+TGG 0.167039 1.4:+74026631 MS.gene34032:CDS
CATTGGCTTTGCTGTATTCA+TGG 0.216375 1.4:+74029361 MS.gene34032:CDS
TGTGGTGGTGTTGGAATTCT+TGG 0.250599 1.4:+74026613 MS.gene34032:CDS
TGCTGTATTCATGGTTCATT+TGG 0.265351 1.4:+74029370 MS.gene34032:CDS
ACATGGTGGCTCAGTGTTTA+GGG 0.314737 1.4:+74027137 MS.gene34032:CDS
AGCAATAAGAGCCCTATAAA+AGG 0.318535 1.4:-74026497 None:intergenic
TTTGGGTTGGACCATTCATT+GGG 0.321050 1.4:+74030011 MS.gene34032:CDS
TACATGGTGGCTCAGTGTTT+AGG 0.322720 1.4:+74027136 MS.gene34032:CDS
GATTGTTGGTACCTTTGTTT+TGG 0.338987 1.4:+74027276 MS.gene34032:CDS
ATTAACCCAGCAGTGACATT+TGG 0.351379 1.4:+74027070 MS.gene34032:CDS
TTAAAGCTCTTGGATCATTC+AGG 0.352174 1.4:+74030083 MS.gene34032:CDS
CAGTGTTTAGGGGCTATTGC+TGG 0.353377 1.4:+74027148 MS.gene34032:CDS
GTCCTTGTTTACTGCACTGC+TGG 0.353886 1.4:+74026667 MS.gene34032:CDS
CACCAGCTTTAACATCAGTT+TGG 0.356493 1.4:-74026582 None:intergenic
TTGGAATTCTTGGTATTGCT+TGG 0.357512 1.4:+74026623 MS.gene34032:CDS
TGCTGGAGTTGGGTTGGTTA+AGG 0.360281 1.4:+74027165 MS.gene34032:CDS
AGTGCTTACTTTGATAGATA+TGG 0.363517 1.4:+74027196 MS.gene34032:CDS
CTCCATGATGGTTACAGTAC+TGG 0.363825 1.4:+74027235 MS.gene34032:CDS
TTAGGGGCTATTGCTGGAGT+TGG 0.368147 1.4:+74027154 MS.gene34032:CDS
TGTGTGGTCAGTGGATCTTT+TGG 0.380699 1.4:+74029993 MS.gene34032:intron
GAATCTCTAGCACTTCTCTT+AGG 0.389590 1.4:-74027325 None:intergenic
TGGAATTCTTGGTATTGCTT+GGG 0.394756 1.4:+74026624 MS.gene34032:CDS
GGCTATTGCTGGAGTTGGGT+TGG 0.397346 1.4:+74027159 MS.gene34032:CDS
TACAGTACTGGTGTTGGATT+AGG 0.404629 1.4:+74027247 MS.gene34032:CDS
TAAGATGAATTGATGGTAGA+AGG 0.409224 1.4:-74030047 None:intergenic
TTAACCCAGCAGTGACATTT+GGG 0.413578 1.4:+74027071 MS.gene34032:CDS
GCAGGTGCTGTTAAAGCTCT+TGG 0.418710 1.4:+74030073 MS.gene34032:CDS
TAGGGGCTATTGCTGGAGTT+GGG 0.422243 1.4:+74027155 MS.gene34032:CDS
GGTGATGCTTGTGGTGGTGT+TGG 0.424068 1.4:+74026604 MS.gene34032:CDS
CTGCTCTTAAGATGAATTGA+TGG 0.428710 1.4:-74030054 None:intergenic
ATGCTGAAGAACTCACAAAA+TGG 0.434066 1.4:+74026473 MS.gene34032:CDS
GGCACTCACATGGTCATCCC+AGG 0.454356 1.4:-74029471 None:intergenic
AATAGCCCAAATGTCACTGC+TGG 0.456045 1.4:-74027076 None:intergenic
ATCAATCCTGCTAGAAGTCT+TGG 0.462477 1.4:+74029419 MS.gene34032:CDS
TTGATGCCAGTGCCAGTGAC+TGG 0.491396 1.4:-74029401 None:intergenic
GGATTAGGTGCTGAGATTGT+TGG 0.494655 1.4:+74027262 MS.gene34032:CDS
TGCTAGAGATTCACATGTGC+CGG 0.507488 1.4:+74027336 MS.gene34032:CDS
ACCATCCCAGTCACTGGCAC+TGG 0.513628 1.4:+74029395 MS.gene34032:CDS
TCTACAACAAAGATAAGCCC+TGG 0.515612 1.4:+74029453 MS.gene34032:CDS
TCAATGAGTGGTGCTGGTGG+AGG 0.515832 1.4:-74026451 None:intergenic
GCAATGGCTGCCCCAATGAA+TGG 0.519647 1.4:-74030022 None:intergenic
TCAGCATCAATGAGTGGTGC+TGG 0.521662 1.4:-74026457 None:intergenic
ATCCAAACTGATGTTAAAGC+TGG 0.525313 1.4:+74026580 MS.gene34032:CDS
CATCAATTCATCTTAAGAGC+AGG 0.526225 1.4:+74030055 MS.gene34032:CDS
TTGGCAACCATCCCAGTCAC+TGG 0.536043 1.4:+74029389 MS.gene34032:CDS
AGGATCAGTAGCAGAGAAAA+CGG 0.540023 1.4:-74027305 None:intergenic
GAACAATGCACTCAAACAGT+AGG 0.546368 1.4:-74030112 None:intergenic
GATCAGAGCAATTATGTACA+TGG 0.548140 1.4:+74027120 MS.gene34032:CDS
ATGAATACAGCAAAGCCAAT+GGG 0.548910 1.4:-74029359 None:intergenic
GTGGTGCTGGTGGAGGGTCA+TGG 0.549256 1.4:-74026444 None:intergenic
TTCCAGCAGTGCAGTAAACA+AGG 0.555662 1.4:-74026669 None:intergenic
CACCAGTACTGTAACCATCA+TGG 0.555683 1.4:-74027237 None:intergenic
TACTTTGATAGATATGGTGG+TGG 0.560516 1.4:+74027202 MS.gene34032:CDS
ACAGCAAAGCCAATGGGAAG+TGG 0.562056 1.4:-74029353 None:intergenic
CAGTCAAAACAGTAACGTAA+AGG 0.566620 1.4:-74026543 None:intergenic
CATGGTGGCTCAGTGTTTAG+GGG 0.567199 1.4:+74027138 MS.gene34032:CDS
CATGAATACAGCAAAGCCAA+TGG 0.582174 1.4:-74029360 None:intergenic
TGATGCCAGTGCCAGTGACT+GGG 0.591533 1.4:-74029400 None:intergenic
AACAATGCACTCAAACAGTA+GGG 0.595283 1.4:-74030111 None:intergenic
ATAGCCCAAATGTCACTGCT+GGG 0.598118 1.4:-74027075 None:intergenic
CAATGAGTGGTGCTGGTGGA+GGG 0.603087 1.4:-74026450 None:intergenic
GCAGAACCAAGACTTCTAGC+AGG 0.610357 1.4:-74029425 None:intergenic
GATGGTTACAGTACTGGTGT+TGG 0.612517 1.4:+74027241 MS.gene34032:CDS
CTACAACAAAGATAAGCCCT+GGG 0.614303 1.4:+74029454 MS.gene34032:CDS
GCATCAATGAGTGGTGCTGG+TGG 0.623719 1.4:-74026454 None:intergenic
GCCAGTGCCAGTGACTGGGA+TGG 0.626932 1.4:-74029396 None:intergenic
GTAATCCATCCAAATGGCAA+AGG 0.627109 1.4:+74026378 None:intergenic
AAAGCTGGTGGTGATGCTTG+TGG 0.631014 1.4:+74026595 MS.gene34032:CDS
TTGGGTTGGACCATTCATTG+GGG 0.640946 1.4:+74030012 MS.gene34032:CDS
GCACTCACATGGTCATCCCA+GGG 0.641943 1.4:-74029470 None:intergenic
CAAACTGATGTTAAAGCTGG+TGG 0.644812 1.4:+74026583 MS.gene34032:CDS
TTGATGGTAGAAGGCTGCAA+TGG 0.646870 1.4:-74030038 None:intergenic
GACGTTGAAGTTGCTGAACG+TGG 0.653894 1.4:+74026400 MS.gene34032:CDS
AACGGTGTAAACCAAAACAA+AGG 0.663291 1.4:-74027287 None:intergenic
GCTTACTTTGATAGATATGG+TGG 0.668285 1.4:+74027199 MS.gene34032:CDS
GCTGGTGGTGATGCTTGTGG+TGG 0.673105 1.4:+74026598 MS.gene34032:CDS
CAGAGCAATTATGTACATGG+TGG 0.699949 1.4:+74027123 MS.gene34032:CDS
AGTTCTTCAGCATCAATGAG+TGG 0.710311 1.4:-74026463 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAAGAATAAAATCA+TGG + chr1.4:74029170-74029189 MS.gene34032:intron 10.0%
!! TAAATAAAGAATAAAATCAT+GGG + chr1.4:74029171-74029190 MS.gene34032:intron 10.0%
!! TATAAAGTATGAAAATTTAT+GGG + chr1.4:74027018-74027037 MS.gene34032:intron 10.0%
!! TTATAAAGTATGAAAATTTA+TGG + chr1.4:74027017-74027036 MS.gene34032:intron 10.0%
!! TTCAATACAAATAATTTATA+TGG - chr1.4:74029897-74029916 None:intergenic 10.0%
!!! ACATATATTTTTTATTTAAG+TGG - chr1.4:74027639-74027658 None:intergenic 10.0%
!!! ATATATTTTTTATTTAAGTG+GGG - chr1.4:74027637-74027656 None:intergenic 10.0%
!!! CATATATTTTTTATTTAAGT+GGG - chr1.4:74027638-74027657 None:intergenic 10.0%
!!! TTAATTTTGAATAAGTTTTT+TGG + chr1.4:74028448-74028467 MS.gene34032:intron 10.0%
!!! TTTATTCTTTATTTATTAGA+AGG - chr1.4:74029166-74029185 None:intergenic 10.0%
!! AAATAAAAATGAAAACATAC+CGG - chr1.4:74027358-74027377 None:intergenic 15.0%
!! ATTATTTGTATTCATATGTT+TGG + chr1.4:74029262-74029281 MS.gene34032:intron 15.0%
!!! AAATTGCGTTTTTATTTTAT+TGG + chr1.4:74027979-74027998 MS.gene34032:intron 15.0%
!!! AATGATGGTATTTATTATTT+TGG - chr1.4:74028739-74028758 None:intergenic 15.0%
!!! AATTGCGTTTTTATTTTATT+GGG + chr1.4:74027980-74027999 MS.gene34032:intron 15.0%
!!! ATTAGAGTTAATTTTTTTTG+AGG - chr1.4:74027608-74027627 None:intergenic 15.0%
!!! TATATTTTTTATTTAAGTGG+GGG - chr1.4:74027636-74027655 None:intergenic 15.0%
!!! TGTGTATATGATTTTTTTTT+AGG - chr1.4:74028299-74028318 None:intergenic 15.0%
!!! TTTTTGGCTTATATTTTAAA+GGG + chr1.4:74026971-74026990 MS.gene34032:intron 15.0%
!!! TTTTTTGGCTTATATTTTAA+AGG + chr1.4:74026970-74026989 MS.gene34032:intron 15.0%
!! AGTAATTACCAAAAACAATA+AGG + chr1.4:74028635-74028654 MS.gene34032:intron 20.0%
!! AGTATATATGACTAATAATC+AGG + chr1.4:74027525-74027544 MS.gene34032:intron 20.0%
!! ATCATTTCATTTGGAAATTA+TGG - chr1.4:74028842-74028861 None:intergenic 20.0%
!! ATGTTGAAAATATTGATCAA+AGG + chr1.4:74027496-74027515 MS.gene34032:intron 20.0%
!! ATTAAAAAATCAGAATCAGA+AGG - chr1.4:74027940-74027959 None:intergenic 20.0%
!! ATTATTTGTATTGAATGAAC+TGG + chr1.4:74029902-74029921 MS.gene34032:intron 20.0%
!! CTAAAAAAAGATAAGGAATA+TGG + chr1.4:74029942-74029961 MS.gene34032:intron 20.0%
!! GTAATTACCAAAAACAATAA+GGG + chr1.4:74028636-74028655 MS.gene34032:intron 20.0%
!! TGTTGAAAATATTGATCAAA+GGG + chr1.4:74027497-74027516 MS.gene34032:intron 20.0%
!! TTAAAAAATCAGAATCAGAA+GGG - chr1.4:74027939-74027958 None:intergenic 20.0%
!! TTAAGTGATTATACAAATTG+AGG - chr1.4:74027740-74027759 None:intergenic 20.0%
!! TTGTCAACTAAAAAAAGATA+AGG + chr1.4:74029935-74029954 MS.gene34032:intron 20.0%
!! TTTAACAACATCATTTCATT+TGG - chr1.4:74028851-74028870 None:intergenic 20.0%
!!! AAAAATAAAGTATTTGCAAG+TGG + chr1.4:74028069-74028088 MS.gene34032:intron 20.0%
!!! ATAGGCTTTACATATATTTT+TGG + chr1.4:74029828-74029847 MS.gene34032:intron 20.0%
!!! CAGAAATAAATTTGTTTTCA+AGG - chr1.4:74028998-74029017 None:intergenic 20.0%
!!! TTTAACTTTGAAGAGTTTTT+TGG + chr1.4:74026955-74026974 MS.gene34032:intron 20.0%
! AAAAAAATTAAGCGAAAGAG+AGG - chr1.4:74027893-74027912 None:intergenic 25.0%
! AAAGGGTTACTATTATTTGA+AGG + chr1.4:74026988-74027007 MS.gene34032:intron 25.0%
! AAGCACTAAGAAATTAATGA+TGG - chr1.4:74028754-74028773 None:intergenic 25.0%
! ACATAAAGTGACAAAACAAA+TGG - chr1.4:74029231-74029250 None:intergenic 25.0%
! ATAAAGTGACAAAACAAATG+GGG - chr1.4:74029229-74029248 None:intergenic 25.0%
! ATATATGTAAAGCCTATGTT+TGG - chr1.4:74029825-74029844 None:intergenic 25.0%
! ATCTTTAACACAAGCAATTA+TGG - chr1.4:74029611-74029630 None:intergenic 25.0%
! CATAAAGTGACAAAACAAAT+GGG - chr1.4:74029230-74029249 None:intergenic 25.0%
! TGTGATTCTTTCAATGAAAT+AGG - chr1.4:74027779-74027798 None:intergenic 25.0%
! TTCATACTCTTAATTCTTGT+AGG + chr1.4:74029871-74029890 MS.gene34032:intron 25.0%
! TTTCTTTGGTAAAATTGAAC+TGG + chr1.4:74029648-74029667 MS.gene34032:intron 25.0%
!! AAAAAATATTTGGTTCCTCT+AGG - chr1.4:74028411-74028430 None:intergenic 25.0%
!! AAAAATATTTGGTTCCTCTA+GGG - chr1.4:74028410-74028429 None:intergenic 25.0%
!! AACATTACCCTTATTGTTTT+TGG - chr1.4:74028646-74028665 None:intergenic 25.0%
!! CAATATTTTCAACATATCTC+AGG - chr1.4:74027491-74027510 None:intergenic 25.0%
!! GATTTTCATCAATTCATGTT+TGG + chr1.4:74029584-74029603 MS.gene34032:intron 25.0%
!! GTTTGAAATGAATCTATTGT+AGG + chr1.4:74027040-74027059 MS.gene34032:intron 25.0%
!! TGATAAGTCAATATCAGTTT+TGG + chr1.4:74029105-74029124 MS.gene34032:intron 25.0%
!! TTTAAAACACACCATAAACT+AGG - chr1.4:74028170-74028189 None:intergenic 25.0%
!!! AAAACTGATATTGACTTATC+AGG - chr1.4:74029106-74029125 None:intergenic 25.0%
!!! AATCCACTTTTTACAAGTTT+GGG - chr1.4:74028965-74028984 None:intergenic 25.0%
!!! GTTTGAACTAGTTTGTTTTT+TGG + chr1.4:74028497-74028516 MS.gene34032:intron 25.0%
!!! GTTTTTTGTTTTGTATGTGA+AGG + chr1.4:74029322-74029341 MS.gene34032:intron 25.0%
!!! TTTTTACCTACTTTTTTGCT+TGG + chr1.4:74028679-74028698 MS.gene34032:intron 25.0%
AACATAACTAAGCTCATGTT+TGG + chr1.4:74029701-74029720 MS.gene34032:intron 30.0%
AACATGAGCTTAGTTATGTT+TGG - chr1.4:74029701-74029720 None:intergenic 30.0%
ACCAGCTAGAAGTTAAAATA+TGG - chr1.4:74029502-74029521 None:intergenic 30.0%
AGAAGTTAAAATATGGAACG+AGG - chr1.4:74029495-74029514 None:intergenic 30.0%
AGAGAGGTAGAATTTACTAA+CGG - chr1.4:74027877-74027896 None:intergenic 30.0%
AGTGCTTACTTTGATAGATA+TGG + chr1.4:74027196-74027215 MS.gene34032:CDS 30.0%
GCTAGAAATCTAAGTTTCTT+TGG + chr1.4:74029634-74029653 MS.gene34032:intron 30.0%
GTGATTATACAAATTGAGGA+TGG - chr1.4:74027736-74027755 None:intergenic 30.0%
TAAAGTGACAAAACAAATGG+GGG - chr1.4:74029228-74029247 None:intergenic 30.0%
TACACAATCATGATAAGTCA+TGG + chr1.4:74028326-74028345 MS.gene34032:intron 30.0%
TCATTTGGAAATTATGGTGA+AGG - chr1.4:74028836-74028855 None:intergenic 30.0%
TCGTATCTGCTTTAATTCAA+TGG + chr1.4:74029292-74029311 MS.gene34032:intron 30.0%
TGAAATGAATCTATTGTAGG+TGG + chr1.4:74027043-74027062 MS.gene34032:intron 30.0%
TTTGTTTGTGTGAGTTTCAA+TGG - chr1.4:74026759-74026778 None:intergenic 30.0%
! ATATTTTGTTCCTTTGTGTG+TGG + chr1.4:74029977-74029996 MS.gene34032:intron 30.0%
! CACAAAATGGTCCTTTTATA+GGG + chr1.4:74026486-74026505 MS.gene34032:CDS 30.0%
! TAAGATGAATTGATGGTAGA+AGG - chr1.4:74030050-74030069 None:intergenic 30.0%
! TCACAAAATGGTCCTTTTAT+AGG + chr1.4:74026485-74026504 MS.gene34032:CDS 30.0%
! TGTTTTGTATGTGAAGGTTT+TGG + chr1.4:74029328-74029347 MS.gene34032:intron 30.0%
!! CTGGCATTGAAATCAATTTT+AGG + chr1.4:74029667-74029686 MS.gene34032:intron 30.0%
!! CTTTTATCTTGATTCGAACT+CGG - chr1.4:74026791-74026810 None:intergenic 30.0%
!! TTTTATCTTGATTCGAACTC+GGG - chr1.4:74026790-74026809 None:intergenic 30.0%
!!! GAATCCACTTTTTACAAGTT+TGG - chr1.4:74028966-74028985 None:intergenic 30.0%
!!! GTTACTGTTTTGACTGTTAT+TGG + chr1.4:74026550-74026569 MS.gene34032:CDS 30.0%
!!! TAGTTTGTTTTTTGGTGCTT+TGG + chr1.4:74028505-74028524 MS.gene34032:intron 30.0%
!!! TCCATATTTTAACTTCTAGC+TGG + chr1.4:74029498-74029517 MS.gene34032:intron 30.0%
!!! TTTTTTATTTAAGTGGGGGT+TGG - chr1.4:74027632-74027651 None:intergenic 30.0%
AAAACACACCATAAACTAGG+AGG - chr1.4:74028167-74028186 None:intergenic 35.0%
AAAGTGAGAAATATCCCTAG+AGG + chr1.4:74028393-74028412 MS.gene34032:intron 35.0%
AACGGTGTAAACCAAAACAA+AGG - chr1.4:74027290-74027309 None:intergenic 35.0%
AAGAAGCCAAGCAAAAAAGT+AGG - chr1.4:74028688-74028707 None:intergenic 35.0%
AATTGCAACCTCCTAGTTTA+TGG + chr1.4:74028156-74028175 MS.gene34032:intron 35.0%
ACTCTCATACAAGGTATGAT+AGG - chr1.4:74028915-74028934 None:intergenic 35.0%
AGCAATAAGAGCCCTATAAA+AGG - chr1.4:74026500-74026519 None:intergenic 35.0%
ATATGACTAATAATCAGGCC+CGG + chr1.4:74027530-74027549 MS.gene34032:intron 35.0%
ATCCAAACTGATGTTAAAGC+TGG + chr1.4:74026580-74026599 MS.gene34032:CDS 35.0%
ATGAATACAGCAAAGCCAAT+GGG - chr1.4:74029362-74029381 None:intergenic 35.0%
ATGATCTCAAATTGCTTCAG+AGG + chr1.4:74028577-74028596 MS.gene34032:intron 35.0%
ATGCCCAAACTTGTAAAAAG+TGG + chr1.4:74028959-74028978 MS.gene34032:intron 35.0%
ATGCTGAAGAACTCACAAAA+TGG + chr1.4:74026473-74026492 MS.gene34032:CDS 35.0%
CAGTCAAAACAGTAACGTAA+AGG - chr1.4:74026546-74026565 None:intergenic 35.0%
CATCAATTCATCTTAAGAGC+AGG + chr1.4:74030055-74030074 MS.gene34032:CDS 35.0%
CTCTCATACAAGGTATGATA+GGG - chr1.4:74028914-74028933 None:intergenic 35.0%
CTGACAATACCGATATTGTT+AGG - chr1.4:74026821-74026840 None:intergenic 35.0%
CTGCTCTTAAGATGAATTGA+TGG - chr1.4:74030057-74030076 None:intergenic 35.0%
GACAATGACATAGAAGTCAT+AGG - chr1.4:74029056-74029075 None:intergenic 35.0%
GATCAGAGCAATTATGTACA+TGG + chr1.4:74027120-74027139 MS.gene34032:CDS 35.0%
GCTTACTTTGATAGATATGG+TGG + chr1.4:74027199-74027218 MS.gene34032:CDS 35.0%
GTTTGGATTCACAATGAGTT+TGG - chr1.4:74029765-74029784 None:intergenic 35.0%
TACCAGATTTATGTCCAGAT+AGG - chr1.4:74027705-74027724 None:intergenic 35.0%
TACTTTGATAGATATGGTGG+TGG + chr1.4:74027202-74027221 MS.gene34032:CDS 35.0%
TGCTGTATTCATGGTTCATT+TGG + chr1.4:74029370-74029389 MS.gene34032:CDS 35.0%
TGGAAATTATGGTGAAGGAA+AGG - chr1.4:74028831-74028850 None:intergenic 35.0%
TGGAATTCTTGGTATTGCTT+GGG + chr1.4:74026624-74026643 MS.gene34032:CDS 35.0%
TTAAAGCTCTTGGATCATTC+AGG + chr1.4:74030083-74030102 MS.gene34032:CDS 35.0%
TTGGAATTCTTGGTATTGCT+TGG + chr1.4:74026623-74026642 MS.gene34032:CDS 35.0%
! AGTGCTTACTTGCATCTTTT+GGG + chr1.4:74028767-74028786 MS.gene34032:intron 35.0%
! CTCGGCTCTCTATTTAAAAT+AGG - chr1.4:74028008-74028027 None:intergenic 35.0%
! GCTTCTTTTAGTCAACATCT+TGG + chr1.4:74028701-74028720 MS.gene34032:intron 35.0%
! TAGTGCTTACTTGCATCTTT+TGG + chr1.4:74028766-74028785 MS.gene34032:intron 35.0%
! TTTATCTTGATTCGAACTCG+GGG - chr1.4:74026789-74026808 None:intergenic 35.0%
!! AGTGACATTTGGGCTATTTT+TGG + chr1.4:74027081-74027100 MS.gene34032:CDS 35.0%
!! CGAATCAAGATAAAAGTGTC+CGG + chr1.4:74026795-74026814 MS.gene34032:intron 35.0%
!! GATTGTTGGTACCTTTGTTT+TGG + chr1.4:74027276-74027295 MS.gene34032:CDS 35.0%
!! GATTTGATTTGACCAAAGCA+CGG + chr1.4:74029731-74029750 MS.gene34032:intron 35.0%
!! TAGACTTTAGTTCTCCTATC+TGG + chr1.4:74027688-74027707 MS.gene34032:intron 35.0%
AACTCACACAAACAAATGCG+AGG + chr1.4:74026763-74026782 MS.gene34032:intron 40.0%
AATTTACTAACGGCGTCGTT+TGG - chr1.4:74027867-74027886 None:intergenic 40.0%
AGGATCAGTAGCAGAGAAAA+CGG - chr1.4:74027308-74027327 None:intergenic 40.0%
AGTTCTTCAGCATCAATGAG+TGG - chr1.4:74026466-74026485 None:intergenic 40.0%
ATCAATCCTGCTAGAAGTCT+TGG + chr1.4:74029419-74029438 MS.gene34032:CDS 40.0%
ATTAACCCAGCAGTGACATT+TGG + chr1.4:74027070-74027089 MS.gene34032:CDS 40.0%
CAAACTGATGTTAAAGCTGG+TGG + chr1.4:74026583-74026602 MS.gene34032:CDS 40.0%
CAATACCGATATTGTTAGGC+CGG - chr1.4:74026817-74026836 None:intergenic 40.0%
CACTTATCCGTTGTGGAAAA+GGG - chr1.4:74027838-74027857 None:intergenic 40.0%
CAGAGCAATTATGTACATGG+TGG + chr1.4:74027123-74027142 MS.gene34032:CDS 40.0%
CATACATGCACTTCGAAAAC+AGG - chr1.4:74027419-74027438 None:intergenic 40.0%
CATGAATACAGCAAAGCCAA+TGG - chr1.4:74029363-74029382 None:intergenic 40.0%
CCAATTAGATTTGCCAGCTT+AGG - chr1.4:74029078-74029097 None:intergenic 40.0%
CCACAAACAACTCTCATACA+AGG - chr1.4:74028924-74028943 None:intergenic 40.0%
CCTAAGCTGGCAAATCTAAT+TGG + chr1.4:74029075-74029094 MS.gene34032:intron 40.0%
CCTTGTATGAGAGTTGTTTG+TGG + chr1.4:74028921-74028940 MS.gene34032:intron 40.0%
CGGTATTGTCAGTTGAGTTA+GGG + chr1.4:74026829-74026848 MS.gene34032:intron 40.0%
CTACAACAAAGATAAGCCCT+GGG + chr1.4:74029454-74029473 MS.gene34032:CDS 40.0%
CTCCTATCTGGACATAAATC+TGG + chr1.4:74027700-74027719 MS.gene34032:intron 40.0%
GAATCTCTAGCACTTCTCTT+AGG - chr1.4:74027328-74027347 None:intergenic 40.0%
GTGGAAAAGGGAAAAACGAA+TGG - chr1.4:74027826-74027845 None:intergenic 40.0%
TCACTTATCCGTTGTGGAAA+AGG - chr1.4:74027839-74027858 None:intergenic 40.0%
TCGGTATTGTCAGTTGAGTT+AGG + chr1.4:74026828-74026847 MS.gene34032:intron 40.0%
TCTACAACAAAGATAAGCCC+TGG + chr1.4:74029453-74029472 MS.gene34032:CDS 40.0%
TCTATGTCATTGTCCTAAGC+TGG + chr1.4:74029062-74029081 MS.gene34032:intron 40.0%
TGTATGAGAGTTGTTTGTGG+AGG + chr1.4:74028924-74028943 MS.gene34032:intron 40.0%
TTAACCCAGCAGTGACATTT+GGG + chr1.4:74027071-74027090 MS.gene34032:CDS 40.0%
TTTACCACCCTAGCATGTTT+AGG - chr1.4:74028797-74028816 None:intergenic 40.0%
TTTCCTTCCACATTTAGTCC+AGG - chr1.4:74028052-74028071 None:intergenic 40.0%
! AAAGCCTATGTTTGGTTCCA+TGG - chr1.4:74029817-74029836 None:intergenic 40.0%
! CACCAGCTTTAACATCAGTT+TGG - chr1.4:74026585-74026604 None:intergenic 40.0%
! CGTTTTTCCCTTTTCCACAA+CGG + chr1.4:74027828-74027847 MS.gene34032:intron 40.0%
! GATTTGTCACTTATCCGTTG+TGG - chr1.4:74027845-74027864 None:intergenic 40.0%
! GGTGCTAATTTTCTCCATGA+TGG + chr1.4:74027223-74027242 MS.gene34032:CDS 40.0%
! TGATTTGTGGCCAATCCAAT+TGG + chr1.4:74029791-74029810 MS.gene34032:intron 40.0%
!! CATTGGCTTTGCTGTATTCA+TGG + chr1.4:74029361-74029380 MS.gene34032:CDS 40.0%
!! TACAGTACTGGTGTTGGATT+AGG + chr1.4:74027247-74027266 MS.gene34032:CDS 40.0%
!! TCCAAACCAGCATTGATTTG+TGG + chr1.4:74029778-74029797 MS.gene34032:intron 40.0%
!! TTTGGGTTGGACCATTCATT+GGG + chr1.4:74030011-74030030 MS.gene34032:CDS 40.0%
!!! TTTTGGGTTGGACCATTCAT+TGG + chr1.4:74030010-74030029 MS.gene34032:CDS 40.0%
!!! TTTTTGAGGCCCTTAGCTTT+TGG - chr1.4:74027594-74027613 None:intergenic 40.0%
AATAGCCCAAATGTCACTGC+TGG - chr1.4:74027079-74027098 None:intergenic 45.0%
ACATGGTGGCTCAGTGTTTA+GGG + chr1.4:74027137-74027156 MS.gene34032:CDS 45.0%
ACCTCGTCTAAGGACTCAAA+AGG - chr1.4:74026728-74026747 None:intergenic 45.0%
AGCCTCCTATTTCATAGGGA+CGG + chr1.4:74028026-74028045 MS.gene34032:intron 45.0%
AGCGTGCCTTTGTGGTATAT+GGG + chr1.4:74028885-74028904 MS.gene34032:intron 45.0%
AGTGTCCGGCCTAACAATAT+CGG + chr1.4:74026809-74026828 MS.gene34032:intron 45.0%
ATAGCCCAAATGTCACTGCT+GGG - chr1.4:74027078-74027097 None:intergenic 45.0%
ATGAGAGTTGTTTGTGGAGG+TGG + chr1.4:74028927-74028946 MS.gene34032:intron 45.0%
CACCAGTACTGTAACCATCA+TGG - chr1.4:74027240-74027259 None:intergenic 45.0%
CTCCATGATGGTTACAGTAC+TGG + chr1.4:74027235-74027254 MS.gene34032:CDS 45.0%
GGGTTCACCTAAACATGCTA+GGG + chr1.4:74028787-74028806 MS.gene34032:intron 45.0%
GGTACTTAACACCTCGTCTA+AGG - chr1.4:74026738-74026757 None:intergenic 45.0%
GTCAGTTGAGTTAGGGCTTA+TGG + chr1.4:74026836-74026855 MS.gene34032:intron 45.0%
GTGACAAAACAAATGGGGGA+TGG - chr1.4:74029224-74029243 None:intergenic 45.0%
TACATGGTGGCTCAGTGTTT+AGG + chr1.4:74027136-74027155 MS.gene34032:CDS 45.0%
TACTGCACTGCTGGAATTTC+AGG + chr1.4:74026676-74026695 MS.gene34032:CDS 45.0%
TCCCTATGAAATAGGAGGCT+CGG - chr1.4:74028026-74028045 None:intergenic 45.0%
TGCTAGAGATTCACATGTGC+CGG + chr1.4:74027336-74027355 MS.gene34032:CDS 45.0%
TGGGTTCACCTAAACATGCT+AGG + chr1.4:74028786-74028805 MS.gene34032:intron 45.0%
TTCACCTAAACATGCTAGGG+TGG + chr1.4:74028790-74028809 MS.gene34032:intron 45.0%
TTCCAGCAGTGCAGTAAACA+AGG - chr1.4:74026672-74026691 None:intergenic 45.0%
TTGGCCATGGAACCAAACAT+AGG + chr1.4:74029810-74029829 MS.gene34032:intron 45.0%
! CTTGGTATTGCTTGGGCTTT+TGG + chr1.4:74026631-74026650 MS.gene34032:CDS 45.0%
! GATTGGCCACAAATCAATGC+TGG - chr1.4:74029787-74029806 None:intergenic 45.0%
! GCCACAAATCAATGCTGGTT+TGG - chr1.4:74029782-74029801 None:intergenic 45.0%
! GTGTGGTCAGTGGATCTTTT+GGG + chr1.4:74029994-74030013 MS.gene34032:intron 45.0%
! TGTGGTGGTGTTGGAATTCT+TGG + chr1.4:74026613-74026632 MS.gene34032:CDS 45.0%
! TGTGTGGTCAGTGGATCTTT+TGG + chr1.4:74029993-74030012 MS.gene34032:intron 45.0%
! TGTTTGGTTCCATGGCCAAT+TGG - chr1.4:74029809-74029828 None:intergenic 45.0%
! TTGATGGTAGAAGGCTGCAA+TGG - chr1.4:74030041-74030060 None:intergenic 45.0%
! TTGATTTGACCAAAGCACGG+TGG + chr1.4:74029734-74029753 MS.gene34032:intron 45.0%
!! GATGGTTACAGTACTGGTGT+TGG + chr1.4:74027241-74027260 MS.gene34032:CDS 45.0%
!! GGATTAGGTGCTGAGATTGT+TGG + chr1.4:74027262-74027281 MS.gene34032:CDS 45.0%
!! TCCTTTTGAGTCCTTAGACG+AGG + chr1.4:74026724-74026743 MS.gene34032:intron 45.0%
!! TTGGGTTGGACCATTCATTG+GGG + chr1.4:74030012-74030031 MS.gene34032:CDS 45.0%
!! TTGGTGCTTTGGTTCTGCTT+TGG + chr1.4:74028516-74028535 MS.gene34032:intron 45.0%
!!! TGGGCTATTTTTGGCTCGTA+AGG + chr1.4:74027090-74027109 MS.gene34032:CDS 45.0%
!! TATTACATTAAAAAAATATT+TGG - chr1.4:74028421-74028440 None:intergenic 5.0%
!! TTTAGAAAATAAATAAATTA+AGG - chr1.4:74028376-74028395 None:intergenic 5.0%
ACAAATGGGGGATGGACAGA+TGG - chr1.4:74029216-74029235 None:intergenic 50.0%
ACAGCAAAGCCAATGGGAAG+TGG - chr1.4:74029356-74029375 None:intergenic 50.0%
AGCCGAGCCTCCTATTTCAT+AGG + chr1.4:74028021-74028040 MS.gene34032:intron 50.0%
CAAATGGGGGATGGACAGAT+GGG - chr1.4:74029215-74029234 None:intergenic 50.0%
CAGCGTGCCTTTGTGGTATA+TGG + chr1.4:74028884-74028903 MS.gene34032:intron 50.0%
CAGTGTTTAGGGGCTATTGC+TGG + chr1.4:74027148-74027167 MS.gene34032:CDS 50.0%
CATGGTGGCTCAGTGTTTAG+GGG + chr1.4:74027138-74027157 MS.gene34032:CDS 50.0%
CGTGCCTTTGTGGTATATGG+GGG + chr1.4:74028887-74028906 MS.gene34032:intron 50.0%
GACGTTGAAGTTGCTGAACG+TGG + chr1.4:74026400-74026419 MS.gene34032:CDS 50.0%
GATCCACTGACCACACACAA+AGG - chr1.4:74029990-74030009 None:intergenic 50.0%
GCAGAACCAAGACTTCTAGC+AGG - chr1.4:74029428-74029447 None:intergenic 50.0%
GCCGAGCCTCCTATTTCATA+GGG + chr1.4:74028022-74028041 MS.gene34032:intron 50.0%
GCGTGCCTTTGTGGTATATG+GGG + chr1.4:74028886-74028905 MS.gene34032:intron 50.0%
GGTTCCATGGCCAATTGGAT+TGG - chr1.4:74029804-74029823 None:intergenic 50.0%
GTTCCTTTGTGTGTGGTCAG+TGG + chr1.4:74029984-74030003 MS.gene34032:intron 50.0%
TAGGGGCTATTGCTGGAGTT+GGG + chr1.4:74027155-74027174 MS.gene34032:CDS 50.0%
TCAGCATCAATGAGTGGTGC+TGG - chr1.4:74026460-74026479 None:intergenic 50.0%
TTAGGGGCTATTGCTGGAGT+TGG + chr1.4:74027154-74027173 MS.gene34032:CDS 50.0%
TTGGCAAAACCACCGTGCTT+TGG - chr1.4:74029746-74029765 None:intergenic 50.0%
! AAAGCTGGTGGTGATGCTTG+TGG + chr1.4:74026595-74026614 MS.gene34032:CDS 50.0%
! GGTATTGCTTGGGCTTTTGG+TGG + chr1.4:74026634-74026653 MS.gene34032:CDS 50.0%
! GTCCTTGTTTACTGCACTGC+TGG + chr1.4:74026667-74026686 MS.gene34032:CDS 50.0%
! TATGGAACGAGGCACTCACA+TGG - chr1.4:74029484-74029503 None:intergenic 50.0%
! TGCAAGGTGCTCAATCAAGC+CGG + chr1.4:74027564-74027583 MS.gene34032:intron 50.0%
!! GCAGGTGCTGTTAAAGCTCT+TGG + chr1.4:74030073-74030092 MS.gene34032:CDS 50.0%
!! GGTCAGTGGATCTTTTGGGT+TGG + chr1.4:74029998-74030017 MS.gene34032:intron 50.0%
!! GTTTTGGCACCACTTCCCAT+TGG + chr1.4:74029344-74029363 MS.gene34032:CDS 50.0%
!! TGCTGGAGTTGGGTTGGTTA+AGG + chr1.4:74027165-74027184 MS.gene34032:CDS 50.0%
AATAATCAGGCCCGGCCTTG+AGG + chr1.4:74027538-74027557 MS.gene34032:intron 55.0%
ACAACAGCAGCGTGCCTTTG+TGG + chr1.4:74028877-74028896 MS.gene34032:intron 55.0%
AGCCGGGCATCCAAAAGCTA+AGG + chr1.4:74027581-74027600 MS.gene34032:intron 55.0%
ATAATCAGGCCCGGCCTTGA+GGG + chr1.4:74027539-74027558 MS.gene34032:intron 55.0%
CCAGGCCGTCCCTATGAAAT+AGG - chr1.4:74028034-74028053 None:intergenic 55.0%
CCTATTTCATAGGGACGGCC+TGG + chr1.4:74028031-74028050 MS.gene34032:intron 55.0%
CGGCCTGGACTAAATGTGGA+AGG + chr1.4:74028046-74028065 MS.gene34032:intron 55.0%
GCAATGGCTGCCCCAATGAA+TGG - chr1.4:74030025-74030044 None:intergenic 55.0%
GCACTCACATGGTCATCCCA+GGG - chr1.4:74029473-74029492 None:intergenic 55.0%
GCCGGGCATCCAAAAGCTAA+GGG + chr1.4:74027582-74027601 MS.gene34032:intron 55.0%
GGCCGTCCCTATGAAATAGG+AGG - chr1.4:74028031-74028050 None:intergenic 55.0%
GGCTATTGCTGGAGTTGGGT+TGG + chr1.4:74027159-74027178 MS.gene34032:CDS 55.0%
GGGACCCCCATATACCACAA+AGG - chr1.4:74028894-74028913 None:intergenic 55.0%
GTGGCCAATCCAATTGGCCA+TGG + chr1.4:74029797-74029816 MS.gene34032:intron 55.0%
TGATGCCAGTGCCAGTGACT+GGG - chr1.4:74029403-74029422 None:intergenic 55.0%
TTGATGCCAGTGCCAGTGAC+TGG - chr1.4:74029404-74029423 None:intergenic 55.0%
TTGGCAACCATCCCAGTCAC+TGG + chr1.4:74029389-74029408 MS.gene34032:CDS 55.0%
! GCAAGGTGCTCAATCAAGCC+GGG + chr1.4:74027565-74027584 MS.gene34032:intron 55.0%
! GCATCAATGAGTGGTGCTGG+TGG - chr1.4:74026457-74026476 None:intergenic 55.0%
! GGTGATGCTTGTGGTGGTGT+TGG + chr1.4:74026604-74026623 MS.gene34032:CDS 55.0%
!! CAATGAGTGGTGCTGGTGGA+GGG - chr1.4:74026453-74026472 None:intergenic 55.0%
!! GCCCTTAGCTTTTGGATGCC+CGG - chr1.4:74027586-74027605 None:intergenic 55.0%
!! TCAATGAGTGGTGCTGGTGG+AGG - chr1.4:74026454-74026473 None:intergenic 55.0%
ACCATCCCAGTCACTGGCAC+TGG + chr1.4:74029395-74029414 MS.gene34032:CDS 60.0%
ACCTTGCACTCCCTCAAGGC+CGG - chr1.4:74027552-74027571 None:intergenic 60.0%
GAGCACCTTGCACTCCCTCA+AGG - chr1.4:74027556-74027575 None:intergenic 60.0%
GGCACTCACATGGTCATCCC+AGG - chr1.4:74029474-74029493 None:intergenic 60.0%
GGGACGGCCTGGACTAAATG+TGG + chr1.4:74028042-74028061 MS.gene34032:intron 60.0%
! GCTGGTGGTGATGCTTGTGG+TGG + chr1.4:74026598-74026617 MS.gene34032:CDS 60.0%
CCTTGCACTCCCTCAAGGCC+GGG - chr1.4:74027551-74027570 None:intergenic 65.0%
GCCAGTGCCAGTGACTGGGA+TGG - chr1.4:74029399-74029418 None:intergenic 65.0%
!! GTGGTGCTGGTGGAGGGTCA+TGG - chr1.4:74026447-74026466 None:intergenic 65.0%
! CCCGGCCTTGAGGGAGTGCA+AGG + chr1.4:74027548-74027567 MS.gene34032:intron 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 74026391 74030123 74026391 ID=MS.gene34032
chr1.4 mRNA 74026391 74030123 74026391 ID=MS.gene34032.t1;Parent=MS.gene34032
chr1.4 exon 74026391 74026697 74026391 ID=MS.gene34032.t1.exon1;Parent=MS.gene34032.t1
chr1.4 CDS 74026391 74026697 74026391 ID=cds.MS.gene34032.t1;Parent=MS.gene34032.t1
chr1.4 exon 74027062 74027357 74027062 ID=MS.gene34032.t1.exon2;Parent=MS.gene34032.t1
chr1.4 CDS 74027062 74027357 74027062 ID=cds.MS.gene34032.t1;Parent=MS.gene34032.t1
chr1.4 exon 74029344 74029484 74029344 ID=MS.gene34032.t1.exon3;Parent=MS.gene34032.t1
chr1.4 CDS 74029344 74029484 74029344 ID=cds.MS.gene34032.t1;Parent=MS.gene34032.t1
chr1.4 exon 74030004 74030123 74030004 ID=MS.gene34032.t1.exon4;Parent=MS.gene34032.t1
chr1.4 CDS 74030004 74030123 74030004 ID=cds.MS.gene34032.t1;Parent=MS.gene34032.t1
Gene Sequence

>MS.gene34032

ATGGCAAAGGACGTTGAAGTTGCTGAACGTGGCTCTTTCTCTAACAAAGACTACCATGACCCTCCACCAGCACCACTCATTGATGCTGAAGAACTCACAAAATGGTCCTTTTATAGGGCTCTTATTGCTGAGTTCATTGCAACTTTACTTTTCCTTTACGTTACTGTTTTGACTGTTATTGGTTACAGTATCCAAACTGATGTTAAAGCTGGTGGTGATGCTTGTGGTGGTGTTGGAATTCTTGGTATTGCTTGGGCTTTTGGTGGCATGATCTTTGTCCTTGTTTACTGCACTGCTGGAATTTCAGGTTTGTTTTTCTTCAGATCTCTTTGTTCCTTTTGAGTCCTTAGACGAGGTGTTAAGTACCATTGAAACTCACACAAACAAATGCGAGGCCCCGAGTTCGAATCAAGATAAAAGTGTCCGGCCTAACAATATCGGTATTGTCAGTTGAGTTAGGGCTTATGGACGATCTCTTTATGTTTTTTTTTTTTTTTTTTGTACTTAGAAATGTGAAGTCACTTTTCATTTTTGCTTAATATTTTTGTAATTTCTTTCAATTTTTTTAACTTTGAAGAGTTTTTTGGCTTATATTTTAAAGGGTTACTATTATTTGAAGGTGTGATTTATAAAGTATGAAAATTTATGGGTTTGAAATGAATCTATTGTAGGTGGTCACATTAACCCAGCAGTGACATTTGGGCTATTTTTGGCTCGTAAGGTGTCTTTGATCAGAGCAATTATGTACATGGTGGCTCAGTGTTTAGGGGCTATTGCTGGAGTTGGGTTGGTTAAGGCTTTTCAAAGTGCTTACTTTGATAGATATGGTGGTGGTGCTAATTTTCTCCATGATGGTTACAGTACTGGTGTTGGATTAGGTGCTGAGATTGTTGGTACCTTTGTTTTGGTTTACACCGTTTTCTCTGCTACTGATCCTAAGAGAAGTGCTAGAGATTCACATGTGCCGGTATGTTTTCATTTTTATTTTTATTTTTATTTTTTTTTATTTTGCATTTTCTTGTTGTCCTGTTTTCGAAGTGCATGTATGAATAGTACTGTATGAGTTGTGTAGAATATACAAACATGTGATTTAGTTGCCTGAGATATGTTGAAAATATTGATCAAAGGGAATGTAGTATATATGACTAATAATCAGGCCCGGCCTTGAGGGAGTGCAAGGTGCTCAATCAAGCCGGGCATCCAAAAGCTAAGGGCCTCAAAAAAAATTAACTCTAATACCAACCCCCACTTAAATAAAAAATATATGTGTTATTTCTTTACACATTTGAGTTTTTTCTAGACTTTAGTTCTCCTATCTGGACATAAATCTGGTACTATCAAACCATCCTCAATTTGTATAATCACTTAAACTGTCAATTTGAAAACCTATTTCATTGAAAGAATCACAACAATCATTTCTTTTTCACATAAACCATTCGTTTTTCCCTTTTCCACAACGGATAAGTGACAAATCCAAACGACGCCGTTAGTAAATTCTACCTCTCTTTCGCTTAATTTTTTTATATTTCGTTTCATGTTTAGAATCCCTTCTGATTCTGATTTTTTAATAAAGCTTAGCTACACAAAAAAATTGCGTTTTTATTTTATTGGGAGCCTATTTTAAATAGAGAGCCGAGCCTCCTATTTCATAGGGACGGCCTGGACTAAATGTGGAAGGAAAAATAAAGTATTTGCAAGTGGCTATGACATGAATTTTTCTAAATTAACAAGTTTGATCTACTTTTCTCTTAAATACTTTTGTTGTAATTGCAACCTCCTAGTTTATGGTGTGTTTTAAAGAATCAATTTTTTTTGTTGAGTTTAAAGAATCAATTTAAACAAGAAATAAATTAAAGCTCAATGATTAATTAGAAAATCAAATAATCTATTGATATGCTATATACACCTAAAAAAAAATCATATACACACACATGTTACACAATCATGATAAGTCATGGTTGTATTAAAACATATTTGAGATTCCTTAATTTATTTATTTTCTAAAGTGAGAAATATCCCTAGAGGAACCAAATATTTTTTTAATGTAATACTAATAATTAATTTTGAATAAGTTTTTTGGTGTAGTATATATGATTATATTAACAAGTTTGAACTAGTTTGTTTTTTGGTGCTTTGGTTCTGCTTTGGTTGTTTTTTAAGATATAAAATAATTAGTTTTGAAGACAATGATCTCAAATTGCTTCAGAGGAAAGAAAATAAAATCGTGCGTTTCATTTCAATAGTAGTAATTACCAAAAACAATAAGGGTAATGTTCAATGTTCATGATTTTTTACCTACTTTTTTGCTTGGCTTCTTTTAGTCAACATCTTGGATAGTAAGTTTTCCAAAATAATAAATACCATCATTAATTTCTTAGTGCTTACTTGCATCTTTTGGGTTCACCTAAACATGCTAGGGTGGTAAAGCTATCTTTTTCCTTTCCTTCACCATAATTTCCAAATGAAATGATGTTGTTAAATGACACACAACAGCAGCGTGCCTTTGTGGTATATGGGGGTCCCTATCATACCTTGTATGAGAGTTGTTTGTGGAGGTGGTTGAATTTCATGCCCAAACTTGTAAAAAGTGGATTCTAATTTGTTCCTTGAAAACAAATTTATTTCTGTTAAGTTTGAGATTAAAGTCTTCATAGTTATTGTGCCTATGACTTCTATGTCATTGTCCTAAGCTGGCAAATCTAATTGGAATTTCCTGATAAGTCAATATCAGTTTTGGTTCATCTATTATACTTTCAAATACTTTTACTAGATCCTTCTAATAAATAAAGAATAAAATCATGGGCTTCACATGCATGCATGTCCCATCTGTCCATCCCCCATTTGTTTTGTCACTTTATGTTTTTTTTTCTAATTATTTGTATTCATATGTTTGGAATATCTTCGTATCTGCTTTAATTCAATGGATGTAATGTTTTTTGTTTTGTATGTGAAGGTTTTGGCACCACTTCCCATTGGCTTTGCTGTATTCATGGTTCATTTGGCAACCATCCCAGTCACTGGCACTGGCATCAATCCTGCTAGAAGTCTTGGTTCTGCTGTTATCTACAACAAAGATAAGCCCTGGGATGACCATGTGAGTGCCTCGTTCCATATTTTAACTTCTAGCTGGTTTTGTTGTTGTTATGTGTTGAATGTAACGCGATTTATGTTTGAATACATTCACAAAACAAATGATTTTCATCAATTCATGTTTGGACCATAATTGCTTGTGTTAAAGATAAAGCTAGAAATCTAAGTTTCTTTGGTAAAATTGAACTGGCATTGAAATCAATTTTAGGTTCATAATCCAAACATAACTAAGCTCATGTTTGGAATCATCGATTTGATTTGACCAAAGCACGGTGGTTTTGCCAAACTCATTGTGAATCCAAACCAGCATTGATTTGTGGCCAATCCAATTGGCCATGGAACCAAACATAGGCTTTACATATATTTTTGGCTTATGTAATATATACTTAGTTCATACTCTTAATTCTTGTAGGCCATATAAATTATTTGTATTGAATGAACTGGCATTGTCAAGTTGTCAACTAAAAAAAGATAAGGAATATGGAAACTTTTTCTAATATTTTGTTCCTTTGTGTGTGGTCAGTGGATCTTTTGGGTTGGACCATTCATTGGGGCAGCCATTGCAGCCTTCTACCATCAATTCATCTTAAGAGCAGGTGCTGTTAAAGCTCTTGGATCATTCAGGAGTAACCCTACTGTTTGA
Protein sequence

>MS.gene34032.t1

MAKDVEVAERGSFSNKDYHDPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYVTVLTVIGYSIQTDVKAGGDACGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAIAGVGLVKAFQSAYFDRYGGGANFLHDGYSTGVGLGAEIVGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGSAVIYNKDKPWDDHWIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPTV