Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89899.t1 | XP_013455159.1 | 99.7 | 289 | 1 | 0 | 1 | 289 | 1 | 289 | 4.40E-162 | 580.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89899.t1 | Q39196 | 85.1 | 289 | 40 | 1 | 1 | 289 | 1 | 286 | 3.1e-140 | 499.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89899.t1 | A0A072UGL5 | 99.7 | 289 | 1 | 0 | 1 | 289 | 1 | 289 | 3.2e-162 | 580.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89899.t1 | MTR_4g415300 | 99.654 | 289 | 1 | 0 | 1 | 289 | 1 | 289 | 0.0 | 594 |
MS.gene89899.t1 | MTR_8g098375 | 83.333 | 288 | 44 | 2 | 3 | 289 | 2 | 286 | 6.92e-180 | 497 |
MS.gene89899.t1 | MTR_5g010150 | 84.028 | 288 | 42 | 2 | 3 | 289 | 2 | 286 | 3.58e-179 | 495 |
MS.gene89899.t1 | MTR_5g082070 | 80.690 | 290 | 54 | 2 | 1 | 289 | 1 | 289 | 1.01e-173 | 481 |
MS.gene89899.t1 | MTR_3g070210 | 80.345 | 290 | 55 | 2 | 1 | 289 | 1 | 289 | 1.17e-172 | 479 |
MS.gene89899.t1 | MTR_4g415300 | 99.531 | 213 | 1 | 0 | 1 | 213 | 1 | 213 | 3.64e-158 | 440 |
MS.gene89899.t1 | MTR_3g070210 | 79.087 | 263 | 53 | 2 | 1 | 262 | 1 | 262 | 2.10e-151 | 424 |
MS.gene89899.t1 | MTR_7g101190 | 73.152 | 257 | 63 | 1 | 33 | 283 | 16 | 272 | 7.65e-138 | 390 |
MS.gene89899.t1 | MTR_2g094270 | 67.407 | 270 | 81 | 1 | 26 | 288 | 10 | 279 | 1.04e-134 | 383 |
MS.gene89899.t1 | MTR_3g118010 | 69.531 | 256 | 78 | 0 | 33 | 288 | 14 | 269 | 1.71e-132 | 377 |
MS.gene89899.t1 | MTR_4g059390 | 65.799 | 269 | 86 | 1 | 26 | 288 | 9 | 277 | 3.49e-130 | 371 |
MS.gene89899.t1 | MTR_8g098375 | 76.190 | 231 | 49 | 3 | 3 | 230 | 2 | 229 | 3.75e-125 | 357 |
MS.gene89899.t1 | MTR_5g010150 | 81.604 | 212 | 35 | 2 | 3 | 213 | 2 | 210 | 6.11e-123 | 350 |
MS.gene89899.t1 | MTR_2g094270 | 68.465 | 241 | 69 | 1 | 26 | 259 | 10 | 250 | 1.98e-119 | 343 |
MS.gene89899.t1 | MTR_3g070210 | 77.103 | 214 | 47 | 2 | 1 | 213 | 1 | 213 | 7.91e-118 | 337 |
MS.gene89899.t1 | MTR_1g095070 | 77.717 | 184 | 41 | 0 | 100 | 283 | 23 | 206 | 3.69e-105 | 305 |
MS.gene89899.t1 | MTR_1g095070 | 78.125 | 160 | 35 | 0 | 100 | 259 | 23 | 182 | 2.79e-89 | 264 |
MS.gene89899.t1 | MTR_4g059390 | 63.918 | 194 | 64 | 1 | 26 | 213 | 9 | 202 | 4.05e-85 | 254 |
MS.gene89899.t1 | MTR_1g077540 | 37.229 | 231 | 127 | 7 | 56 | 281 | 21 | 238 | 7.47e-32 | 119 |
MS.gene89899.t1 | MTR_6g069040 | 38.889 | 234 | 128 | 6 | 56 | 285 | 21 | 243 | 8.60e-32 | 119 |
MS.gene89899.t1 | MTR_7g103030 | 35.965 | 228 | 131 | 6 | 56 | 280 | 21 | 236 | 3.99e-31 | 117 |
MS.gene89899.t1 | MTR_1g115405 | 38.333 | 240 | 129 | 8 | 48 | 281 | 13 | 239 | 6.04e-31 | 116 |
MS.gene89899.t1 | MTR_2g101370 | 34.764 | 233 | 138 | 5 | 51 | 280 | 15 | 236 | 9.01e-30 | 113 |
MS.gene89899.t1 | MTR_4g063090 | 35.242 | 227 | 121 | 7 | 61 | 278 | 26 | 235 | 1.45e-28 | 110 |
MS.gene89899.t1 | MTR_1g006490 | 35.526 | 228 | 125 | 7 | 56 | 278 | 19 | 229 | 4.89e-28 | 108 |
MS.gene89899.t1 | MTR_8g013680 | 35.897 | 234 | 130 | 7 | 51 | 277 | 12 | 232 | 7.92e-28 | 108 |
MS.gene89899.t1 | MTR_1g006590 | 36.522 | 230 | 120 | 9 | 56 | 278 | 19 | 229 | 2.42e-27 | 107 |
MS.gene89899.t1 | MTR_5g012810 | 37.333 | 225 | 126 | 6 | 56 | 277 | 19 | 231 | 1.82e-26 | 104 |
MS.gene89899.t1 | MTR_7g023350 | 36.596 | 235 | 124 | 8 | 56 | 281 | 21 | 239 | 2.83e-26 | 104 |
MS.gene89899.t1 | MTR_2g060360 | 32.231 | 242 | 123 | 8 | 56 | 281 | 19 | 235 | 1.75e-21 | 91.3 |
MS.gene89899.t1 | MTR_8g087710 | 28.788 | 264 | 163 | 8 | 26 | 280 | 1 | 248 | 6.78e-20 | 87.4 |
MS.gene89899.t1 | MTR_5g063930 | 25.984 | 254 | 159 | 6 | 25 | 277 | 19 | 244 | 1.00e-19 | 86.7 |
MS.gene89899.t1 | MTR_7g010650 | 30.085 | 236 | 144 | 9 | 54 | 287 | 35 | 251 | 1.39e-18 | 84.0 |
MS.gene89899.t1 | MTR_2g017660 | 29.130 | 230 | 140 | 7 | 45 | 270 | 28 | 238 | 2.80e-18 | 82.8 |
MS.gene89899.t1 | MTR_4g075570 | 30.270 | 185 | 109 | 6 | 103 | 272 | 95 | 274 | 1.69e-17 | 81.6 |
MS.gene89899.t1 | MTR_2g017590 | 32.075 | 212 | 129 | 6 | 59 | 270 | 39 | 235 | 1.71e-17 | 80.9 |
MS.gene89899.t1 | MTR_2g017620 | 31.797 | 217 | 133 | 6 | 54 | 270 | 36 | 237 | 2.76e-17 | 80.1 |
MS.gene89899.t1 | MTR_2g017620 | 31.797 | 217 | 133 | 6 | 54 | 270 | 22 | 223 | 2.86e-17 | 79.7 |
MS.gene89899.t1 | MTR_8g087720 | 27.632 | 228 | 150 | 6 | 53 | 280 | 35 | 247 | 3.71e-17 | 79.7 |
MS.gene89899.t1 | MTR_4g075590 | 26.721 | 247 | 161 | 7 | 48 | 282 | 29 | 267 | 4.23e-17 | 80.1 |
MS.gene89899.t1 | MTR_4g084880 | 27.027 | 222 | 149 | 5 | 59 | 280 | 38 | 246 | 1.51e-16 | 78.2 |
MS.gene89899.t1 | MTR_4g006730 | 28.302 | 212 | 134 | 6 | 60 | 270 | 79 | 273 | 3.48e-16 | 77.4 |
MS.gene89899.t1 | MTR_5g079570 | 27.586 | 232 | 153 | 6 | 59 | 289 | 39 | 256 | 8.20e-16 | 75.9 |
MS.gene89899.t1 | MTR_2g104940 | 30.516 | 213 | 128 | 8 | 60 | 270 | 84 | 278 | 1.24e-15 | 75.9 |
MS.gene89899.t1 | MTR_2g017610 | 29.717 | 212 | 134 | 5 | 59 | 270 | 41 | 237 | 4.59e-15 | 73.9 |
MS.gene89899.t1 | MTR_3g008920 | 28.251 | 223 | 136 | 7 | 60 | 278 | 30 | 232 | 6.39e-15 | 73.6 |
MS.gene89899.t1 | MTR_2g017570 | 29.245 | 212 | 135 | 5 | 59 | 270 | 41 | 237 | 1.21e-14 | 72.8 |
MS.gene89899.t1 | MTR_1g097840 | 29.333 | 225 | 140 | 9 | 60 | 282 | 78 | 285 | 1.71e-13 | 69.7 |
MS.gene89899.t1 | MTR_4g006730 | 29.609 | 179 | 111 | 5 | 93 | 270 | 22 | 186 | 2.86e-13 | 67.8 |
MS.gene89899.t1 | MTR_4g006630 | 29.609 | 179 | 111 | 5 | 93 | 270 | 22 | 186 | 2.89e-13 | 67.8 |
MS.gene89899.t1 | MTR_2g017620 | 32.530 | 166 | 100 | 4 | 105 | 270 | 3 | 156 | 8.92e-13 | 65.9 |
MS.gene89899.t1 | MTR_1g070385 | 26.609 | 233 | 135 | 7 | 53 | 275 | 59 | 265 | 3.60e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89899.t1 | AT4G00430 | 85.121 | 289 | 40 | 1 | 1 | 289 | 1 | 286 | 0.0 | 510 |
MS.gene89899.t1 | AT2G45960 | 83.737 | 289 | 43 | 1 | 1 | 289 | 1 | 285 | 0.0 | 504 |
MS.gene89899.t1 | AT3G61430 | 83.737 | 289 | 43 | 1 | 1 | 289 | 1 | 285 | 1.50e-176 | 488 |
MS.gene89899.t1 | AT3G61430 | 83.737 | 289 | 43 | 1 | 1 | 289 | 1 | 285 | 1.50e-176 | 488 |
MS.gene89899.t1 | AT1G01620 | 83.737 | 289 | 43 | 1 | 1 | 289 | 1 | 285 | 2.28e-176 | 488 |
MS.gene89899.t1 | AT4G23400 | 83.737 | 289 | 44 | 1 | 1 | 289 | 1 | 286 | 8.43e-175 | 484 |
MS.gene89899.t1 | AT2G45960 | 83.398 | 259 | 39 | 1 | 1 | 259 | 1 | 255 | 9.60e-162 | 451 |
MS.gene89899.t1 | AT2G45960 | 83.398 | 259 | 39 | 1 | 1 | 259 | 1 | 255 | 3.40e-160 | 448 |
MS.gene89899.t1 | AT1G01620 | 86.385 | 213 | 29 | 0 | 77 | 289 | 1 | 213 | 1.59e-137 | 387 |
MS.gene89899.t1 | AT3G53420 | 70.849 | 271 | 73 | 1 | 24 | 288 | 7 | 277 | 2.64e-137 | 389 |
MS.gene89899.t1 | AT3G53420 | 70.849 | 271 | 73 | 1 | 24 | 288 | 7 | 277 | 2.64e-137 | 389 |
MS.gene89899.t1 | AT3G54820 | 71.595 | 257 | 67 | 1 | 33 | 283 | 15 | 271 | 4.36e-137 | 389 |
MS.gene89899.t1 | AT2G37170 | 71.374 | 262 | 69 | 1 | 33 | 288 | 57 | 318 | 1.83e-136 | 389 |
MS.gene89899.t1 | AT2G37170 | 71.374 | 262 | 69 | 1 | 33 | 288 | 14 | 275 | 2.20e-136 | 387 |
MS.gene89899.t1 | AT4G35100 | 70.342 | 263 | 78 | 0 | 26 | 288 | 8 | 270 | 3.22e-136 | 386 |
MS.gene89899.t1 | AT4G35100 | 70.342 | 263 | 78 | 0 | 26 | 288 | 8 | 270 | 3.22e-136 | 386 |
MS.gene89899.t1 | AT2G16850 | 69.582 | 263 | 80 | 0 | 26 | 288 | 6 | 268 | 7.95e-136 | 385 |
MS.gene89899.t1 | AT5G60660 | 68.401 | 269 | 79 | 1 | 26 | 288 | 9 | 277 | 7.04e-134 | 381 |
MS.gene89899.t1 | AT2G39010 | 67.286 | 269 | 82 | 1 | 26 | 288 | 8 | 276 | 7.53e-133 | 378 |
MS.gene89899.t1 | AT2G37180 | 69.847 | 262 | 73 | 1 | 33 | 288 | 14 | 275 | 8.70e-133 | 378 |
MS.gene89899.t1 | AT4G00430 | 81.106 | 217 | 38 | 1 | 1 | 217 | 1 | 214 | 1.35e-128 | 365 |
MS.gene89899.t1 | AT2G39010 | 63.918 | 194 | 64 | 1 | 26 | 213 | 8 | 201 | 2.60e-85 | 255 |
MS.gene89899.t1 | AT1G73190 | 37.860 | 243 | 123 | 8 | 56 | 285 | 24 | 251 | 2.07e-32 | 120 |
MS.gene89899.t1 | AT1G17810 | 35.714 | 238 | 126 | 6 | 56 | 281 | 24 | 246 | 2.40e-30 | 115 |
MS.gene89899.t1 | AT5G47450 | 37.815 | 238 | 126 | 7 | 47 | 277 | 10 | 232 | 4.35e-30 | 114 |
MS.gene89899.t1 | AT3G26520 | 35.193 | 233 | 127 | 7 | 56 | 280 | 22 | 238 | 3.74e-29 | 112 |
MS.gene89899.t1 | AT2G36830 | 34.498 | 229 | 132 | 6 | 56 | 279 | 21 | 236 | 1.40e-28 | 110 |
MS.gene89899.t1 | AT3G16240 | 35.556 | 225 | 131 | 5 | 56 | 277 | 19 | 232 | 1.41e-28 | 110 |
MS.gene89899.t1 | AT4G01470 | 34.177 | 237 | 142 | 5 | 47 | 280 | 12 | 237 | 3.06e-28 | 109 |
MS.gene89899.t1 | AT2G25810 | 34.286 | 245 | 145 | 7 | 43 | 285 | 6 | 236 | 1.34e-26 | 105 |
MS.gene89899.t1 | AT4G17340 | 36.134 | 238 | 130 | 7 | 47 | 277 | 10 | 232 | 6.58e-26 | 103 |
MS.gene89899.t1 | AT3G47440 | 33.607 | 244 | 117 | 8 | 56 | 281 | 23 | 239 | 3.49e-25 | 101 |
MS.gene89899.t1 | AT4G19030 | 30.738 | 244 | 153 | 6 | 42 | 280 | 39 | 271 | 3.71e-20 | 88.6 |
MS.gene89899.t1 | AT4G18910 | 27.451 | 255 | 175 | 5 | 28 | 280 | 22 | 268 | 5.14e-18 | 82.4 |
MS.gene89899.t1 | AT1G31885 | 29.434 | 265 | 158 | 9 | 17 | 270 | 3 | 249 | 7.18e-18 | 82.4 |
MS.gene89899.t1 | AT2G34390 | 27.599 | 279 | 181 | 8 | 6 | 280 | 2 | 263 | 1.61e-16 | 78.2 |
MS.gene89899.t1 | AT5G37820 | 27.778 | 216 | 131 | 6 | 59 | 269 | 46 | 241 | 7.66e-15 | 73.6 |
MS.gene89899.t1 | AT5G37820 | 27.778 | 216 | 131 | 6 | 59 | 269 | 82 | 277 | 8.38e-15 | 73.9 |
MS.gene89899.t1 | AT2G34390 | 29.333 | 225 | 144 | 6 | 59 | 280 | 9 | 221 | 1.36e-14 | 72.4 |
MS.gene89899.t1 | AT1G31885 | 30.000 | 200 | 117 | 6 | 79 | 270 | 11 | 195 | 1.22e-13 | 69.7 |
MS.gene89899.t1 | AT4G10380 | 27.854 | 219 | 140 | 7 | 53 | 270 | 75 | 276 | 1.10e-12 | 67.4 |
MS.gene89899.t1 | AT3G06100 | 29.289 | 239 | 140 | 9 | 56 | 289 | 46 | 260 | 1.35e-12 | 67.0 |
MS.gene89899.t1 | AT5G37810 | 26.126 | 222 | 149 | 5 | 59 | 280 | 46 | 252 | 3.09e-12 | 65.9 |
MS.gene89899.t1 | AT3G06100 | 29.237 | 236 | 138 | 9 | 59 | 289 | 1 | 212 | 7.62e-12 | 64.3 |
Find 64 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGGTGCTGCTGTTGTTAA+AGG | 0.192575 | 4.2:+86138504 | MS.gene89899:CDS |
CAAGGAATTGCTTGGGCTTT+TGG | 0.196988 | 4.2:+86137378 | MS.gene89899:CDS |
TATCATCATGGTCTTTCTAT+AGG | 0.274784 | 4.2:+86137250 | MS.gene89899:CDS |
TTAATACCAGTCCCTGTAAT+TGG | 0.283499 | 4.2:-86139168 | None:intergenic |
AACTGAGGAGCATTTATTAC+TGG | 0.302827 | 4.2:-86137349 | None:intergenic |
TTGGCTACAATTCCAATTAC+AGG | 0.327149 | 4.2:+86139156 | MS.gene89899:CDS |
AACTCTCCATGCTCAAATAA+AGG | 0.345549 | 4.2:-86137228 | None:intergenic |
ATCATCATGGTCTTTCTATA+GGG | 0.347093 | 4.2:+86137251 | MS.gene89899:CDS |
TGCTCCTCAGTTGGTGTTCA+AGG | 0.352446 | 4.2:+86137360 | MS.gene89899:CDS |
CTACATAATTATGCAATGTT+TGG | 0.357596 | 4.2:+86138473 | MS.gene89899:CDS |
TACATAATTATGCAATGTTT+GGG | 0.360536 | 4.2:+86138474 | MS.gene89899:CDS |
GCTCTTGTTTATTGTACTGC+TGG | 0.363023 | 4.2:+86137414 | MS.gene89899:CDS |
ATTAACCCTGCAGTGACATT+TGG | 0.365510 | 4.2:+86138408 | MS.gene89899:CDS |
GGAGTCTCTTGCATTTCTCT+TGG | 0.384985 | 4.2:-86138664 | None:intergenic |
TATTGTACTGCTGGTATCTC+AGG | 0.389148 | 4.2:+86137423 | MS.gene89899:CDS |
GATTGAGCAGCAGTTCCTAT+TGG | 0.401413 | 4.2:-86137162 | None:intergenic |
GGCTGGGATTGCTGAGTTTG+TGG | 0.401640 | 4.2:+86137272 | MS.gene89899:CDS |
GGTGCCAACACTCTCAATAA+AGG | 0.420596 | 4.2:+86138561 | MS.gene89899:CDS |
TTCTGGGTAGGGCCTTTCAC+TGG | 0.421787 | 4.2:+86139875 | MS.gene89899:CDS |
CAATGTTTGGGTGCTATTTG+TGG | 0.422792 | 4.2:+86138486 | MS.gene89899:CDS |
TGGTGTTCAAGGAATTGCTT+GGG | 0.425172 | 4.2:+86137371 | MS.gene89899:CDS |
CACCACCAAGTCTCTCATAT+TGG | 0.426034 | 4.2:-86138539 | None:intergenic |
TCATGGTCTTTCTATAGGGC+TGG | 0.428086 | 4.2:+86137255 | MS.gene89899:CDS |
CATGGTCTTTCTATAGGGCT+GGG | 0.428743 | 4.2:+86137256 | MS.gene89899:CDS |
TATAGAGAAAACCAACCAAT+AGG | 0.431779 | 4.2:+86137147 | MS.gene89899:CDS |
GTCTCTCATATTGGTGTGGT+TGG | 0.442420 | 4.2:-86138530 | None:intergenic |
TGCCTCACTTTGACTTGAAA+GGG | 0.453627 | 4.2:-86139943 | None:intergenic |
TTGCCTCACTTTGACTTGAA+AGG | 0.460204 | 4.2:-86139944 | None:intergenic |
TGCTCCAAGTCCATCACCTA+TGG | 0.464529 | 4.2:-86138589 | None:intergenic |
TTGGTGTTCAAGGAATTGCT+TGG | 0.480404 | 4.2:+86137370 | MS.gene89899:CDS |
AAAAGTCCAAATGTCACTGC+AGG | 0.482401 | 4.2:-86138414 | None:intergenic |
GAGCAGCAGTTCCTATTGGT+TGG | 0.490667 | 4.2:-86137158 | None:intergenic |
TATACAACAAGGACCAAGCT+TGG | 0.508349 | 4.2:+86139220 | MS.gene89899:CDS |
TACTCCATAGGTGATGGACT+TGG | 0.512860 | 4.2:+86138585 | MS.gene89899:CDS |
CGCGCAAGCTATCTCTAACT+AGG | 0.513312 | 4.2:+86138442 | MS.gene89899:CDS |
GCAAGTGCTGCTCCAGTGAA+AGG | 0.524235 | 4.2:-86139887 | None:intergenic |
ATTAATCCAGCTAGAAGTCT+AGG | 0.526601 | 4.2:+86139186 | MS.gene89899:CDS |
ACAATTCCAATTACAGGGAC+TGG | 0.531107 | 4.2:+86139162 | MS.gene89899:CDS |
TATTTAGGCTTACAGGAACA+TGG | 0.533113 | 4.2:-86138686 | None:intergenic |
TGGCTCTGATGACTATTTGA+TGG | 0.539363 | 4.2:-86139919 | None:intergenic |
AGAGATGAAGATGTAAGAGT+AGG | 0.539683 | 4.2:+86137114 | MS.gene89899:CDS |
GTAACCTTTATTGAGAGTGT+TGG | 0.540829 | 4.2:-86138565 | None:intergenic |
GCAGCACCTAGACTTCTAGC+TGG | 0.541290 | 4.2:-86139192 | None:intergenic |
ATACAACAAGGACCAAGCTT+GGG | 0.547452 | 4.2:+86139221 | MS.gene89899:CDS |
TAACATGGTCGTCCCAAGCT+TGG | 0.548361 | 4.2:-86139233 | None:intergenic |
TGGCTACAATTCCAATTACA+GGG | 0.551529 | 4.2:+86139157 | MS.gene89899:CDS |
TGCTCAAATAAAGGTGCTGA+AGG | 0.551644 | 4.2:-86137219 | None:intergenic |
AAAGGTTACTCCATAGGTGA+TGG | 0.553430 | 4.2:+86138579 | MS.gene89899:CDS |
CTCAATAAAGGTTACTCCAT+AGG | 0.557582 | 4.2:+86138573 | MS.gene89899:CDS |
TCACTTTGACTTGAAAGGGA+TGG | 0.562832 | 4.2:-86139939 | None:intergenic |
GGACTTGGAGCAGAGATTGT+TGG | 0.565798 | 4.2:+86138600 | MS.gene89899:CDS |
TCAGCACCTTTATTTGAGCA+TGG | 0.566089 | 4.2:+86137222 | MS.gene89899:CDS |
AGTAATAAATGCTCCTCAGT+TGG | 0.568497 | 4.2:+86137351 | MS.gene89899:CDS |
CACCAATATGAGAGACTTGG+TGG | 0.572403 | 4.2:+86138537 | MS.gene89899:CDS |
CCACACCAATATGAGAGACT+TGG | 0.574053 | 4.2:+86138534 | MS.gene89899:CDS |
ATTTAGGCTTACAGGAACAT+GGG | 0.586028 | 4.2:-86138685 | None:intergenic |
ACAGCAAATCCAATTGGCAG+TGG | 0.605076 | 4.2:-86139120 | None:intergenic |
AGCATGGAGAGTTATCATCA+TGG | 0.618672 | 4.2:+86137238 | MS.gene89899:CDS |
ATCCCTTTCAAGTCAAAGTG+AGG | 0.643751 | 4.2:+86139941 | MS.gene89899:CDS |
AAAGTCCAAATGTCACTGCA+GGG | 0.647445 | 4.2:-86138413 | None:intergenic |
CCAAGTCTCTCATATTGGTG+TGG | 0.652000 | 4.2:-86138534 | None:intergenic |
AATTCCTTGAACACCAACTG+AGG | 0.654839 | 4.2:-86137364 | None:intergenic |
TGCTGCTCTTGTATACAACA+AGG | 0.677621 | 4.2:+86139209 | MS.gene89899:CDS |
CAATATGAGAGACTTGGTGG+TGG | 0.748295 | 4.2:+86138540 | MS.gene89899:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATTTTATATTATTTA+AGG | - | chr4.2:86137514-86137533 | None:intergenic | 0.0% |
!! | AAAATAAAAATTAAGTTCTA+CGG | + | chr4.2:86137524-86137543 | MS.gene89899:intron | 10.0% |
!! | TTTATTAATATTTGTTTGAA+GGG | - | chr4.2:86138147-86138166 | None:intergenic | 10.0% |
!!! | AATCAATGAAATTAAATTTT+TGG | - | chr4.2:86139400-86139419 | None:intergenic | 10.0% |
!!! | ACTTGATTAATTTTATTTTT+TGG | + | chr4.2:86139723-86139742 | MS.gene89899:intron | 10.0% |
!!! | ATTTTTGTTTCTTTATATAA+CGG | + | chr4.2:86137299-86137318 | MS.gene89899:CDS | 10.0% |
!!! | GTGAATTAATATTTTTATTT+AGG | - | chr4.2:86138704-86138723 | None:intergenic | 10.0% |
!!! | TAAAAAAATTGTTATGTTTT+AGG | - | chr4.2:86139370-86139389 | None:intergenic | 10.0% |
!!! | TTTTATTAATATTTGTTTGA+AGG | - | chr4.2:86138148-86138167 | None:intergenic | 10.0% |
!! | ATTAATTAATCAAGTAGTAA+TGG | - | chr4.2:86139753-86139772 | None:intergenic | 15.0% |
!! | TTAAAATGATTTCTAACATT+AGG | - | chr4.2:86139492-86139511 | None:intergenic | 15.0% |
!!! | ATAATTGCTAATTTTGATTT+TGG | - | chr4.2:86137719-86137738 | None:intergenic | 15.0% |
!!! | ATTAGCAATTATTTTTACTA+AGG | + | chr4.2:86137727-86137746 | MS.gene89899:intron | 15.0% |
!!! | ATTTGTTAAAGATTCAAAAA+TGG | + | chr4.2:86138187-86138206 | MS.gene89899:intron | 15.0% |
!!! | CTCTTTTAATTTTTTTATTG+CGG | - | chr4.2:86137646-86137665 | None:intergenic | 15.0% |
!!! | TCTTTTAATTTTTTTATTGC+GGG | - | chr4.2:86137645-86137664 | None:intergenic | 15.0% |
!! | TACATAATTATGCAATGTTT+GGG | + | chr4.2:86138474-86138493 | MS.gene89899:CDS | 20.0% |
!!! | AAATCTAAGGTCTTAATTTT+AGG | - | chr4.2:86138345-86138364 | None:intergenic | 20.0% |
!!! | AATCTAAGGTCTTAATTTTA+GGG | - | chr4.2:86138344-86138363 | None:intergenic | 20.0% |
!!! | ATAAAAATAAGAGTTTTGCT+AGG | + | chr4.2:86138162-86138181 | MS.gene89899:intron | 20.0% |
!!! | ATATTTTTATTTAGGCTTAC+AGG | - | chr4.2:86138696-86138715 | None:intergenic | 20.0% |
!!! | TAAAAATAAGAGTTTTGCTA+GGG | + | chr4.2:86138163-86138182 | MS.gene89899:intron | 20.0% |
!!! | TAACTCACATTACATTATTT+TGG | + | chr4.2:86139841-86139860 | MS.gene89899:intron | 20.0% |
!!! | TTTAAAGTTGATTGAACAAT+TGG | - | chr4.2:86137462-86137481 | None:intergenic | 20.0% |
!!! | TTTTTTTACTTAGAGAAACA+TGG | + | chr4.2:86137779-86137798 | MS.gene89899:intron | 20.0% |
!!! | TTTTTTTTCTTTCTTTGAGT+GGG | + | chr4.2:86137810-86137829 | MS.gene89899:intron | 20.0% |
!!! | TTTTTTTTTCTTTCTTTGAG+TGG | + | chr4.2:86137809-86137828 | MS.gene89899:intron | 20.0% |
! | AAAGATGAAAAAGACTAACA+TGG | - | chr4.2:86139251-86139270 | None:intergenic | 25.0% |
! | ACAAGAGACACAATTATTAT+AGG | - | chr4.2:86139813-86139832 | None:intergenic | 25.0% |
! | ATGATTCATAACTACTGAAA+TGG | + | chr4.2:86139031-86139050 | MS.gene89899:intron | 25.0% |
! | CTACATAATTATGCAATGTT+TGG | + | chr4.2:86138473-86138492 | MS.gene89899:CDS | 25.0% |
! | GTTCGTTAAAGAATAATGAT+TGG | + | chr4.2:86137567-86137586 | MS.gene89899:intron | 25.0% |
! | TAAACACTTTGTAAAGTGAA+GGG | - | chr4.2:86138107-86138126 | None:intergenic | 25.0% |
! | TATGATATATTAGCAAGACT+TGG | - | chr4.2:86139002-86139021 | None:intergenic | 25.0% |
! | TTAAACACTTTGTAAAGTGA+AGG | - | chr4.2:86138108-86138127 | None:intergenic | 25.0% |
! | TTACCAATTATCCTACTATA+CGG | + | chr4.2:86139525-86139544 | MS.gene89899:intron | 25.0% |
! | TTGTTAATTAAGTAGTCTAG+TGG | - | chr4.2:86138836-86138855 | None:intergenic | 25.0% |
!! | AACTTTAGTTCATTTATCTC+CGG | - | chr4.2:86139627-86139646 | None:intergenic | 25.0% |
!! | AATATCTAAAACCGTATAGT+AGG | - | chr4.2:86139539-86139558 | None:intergenic | 25.0% |
!! | CATTTGAATTACTCAGATTT+TGG | + | chr4.2:86139095-86139114 | MS.gene89899:intron | 25.0% |
!!! | ATAACGGTTTTAACTGTTAT+GGG | + | chr4.2:86137315-86137334 | MS.gene89899:CDS | 25.0% |
!!! | ATTGCTAATTTTGATTTTGG+TGG | - | chr4.2:86137716-86137735 | None:intergenic | 25.0% |
!!! | TATAACGGTTTTAACTGTTA+TGG | + | chr4.2:86137314-86137333 | MS.gene89899:CDS | 25.0% |
!!! | TTTTTTTCTTTCTTTGAGTG+GGG | + | chr4.2:86137811-86137830 | MS.gene89899:intron | 25.0% |
AAAAAGACAGCAAATCCAAT+TGG | - | chr4.2:86139129-86139148 | None:intergenic | 30.0% | |
AAACCGTATAGTAGGATAAT+TGG | - | chr4.2:86139531-86139550 | None:intergenic | 30.0% | |
AAAGAATAATGATTGGACCA+AGG | + | chr4.2:86137574-86137593 | MS.gene89899:intron | 30.0% | |
ACATTGCATAATATATGCAG+GGG | + | chr4.2:86138755-86138774 | MS.gene89899:intron | 30.0% | |
ACTTGTCAATCTTGATCTAA+TGG | + | chr4.2:86137979-86137998 | MS.gene89899:intron | 30.0% | |
ATCATCATGGTCTTTCTATA+GGG | + | chr4.2:86137251-86137270 | MS.gene89899:CDS | 30.0% | |
ATGTGTCTATTTACAAATGC+AGG | + | chr4.2:86138378-86138397 | MS.gene89899:intron | 30.0% | |
CCACTTATTCTCCTTAAAAA+GGG | + | chr4.2:86138801-86138820 | MS.gene89899:intron | 30.0% | |
GACATTGCATAATATATGCA+GGG | + | chr4.2:86138754-86138773 | MS.gene89899:intron | 30.0% | |
GCTATGTTAGCAAAAATCTA+AGG | - | chr4.2:86138358-86138377 | None:intergenic | 30.0% | |
GGTGGCTAATAATCATTATA+CGG | - | chr4.2:86137698-86137717 | None:intergenic | 30.0% | |
TATAGAGAAAACCAACCAAT+AGG | + | chr4.2:86137147-86137166 | MS.gene89899:CDS | 30.0% | |
TATCATCATGGTCTTTCTAT+AGG | + | chr4.2:86137250-86137269 | MS.gene89899:CDS | 30.0% | |
TTGTTTGAAGGGAAAATCTA+AGG | - | chr4.2:86138136-86138155 | None:intergenic | 30.0% | |
!! | CCTTTTTAAGGAGAATAAGT+GGG | - | chr4.2:86138803-86138822 | None:intergenic | 30.0% |
!! | CTTTTTAAGGAGAATAAGTG+GGG | - | chr4.2:86138802-86138821 | None:intergenic | 30.0% |
!! | TTACGTTAGTCCTTTTGATT+CGG | + | chr4.2:86139418-86139437 | MS.gene89899:intron | 30.0% |
!!! | AATTGGATTTGCTGTCTTTT+TGG | + | chr4.2:86139128-86139147 | MS.gene89899:CDS | 30.0% |
!!! | ACGTGTTTTTTTCAAGACTA+AGG | + | chr4.2:86137750-86137769 | MS.gene89899:intron | 30.0% |
!!! | ATTACATTATTTTGGTGCAG+TGG | + | chr4.2:86139849-86139868 | MS.gene89899:intron | 30.0% |
!!! | TTTTTTCTTTCTTTGAGTGG+GGG | + | chr4.2:86137812-86137831 | MS.gene89899:intron | 30.0% |
AACTCTCCATGCTCAAATAA+AGG | - | chr4.2:86137231-86137250 | None:intergenic | 35.0% | |
ACATGTTAAGAAGTCTGAAG+AGG | - | chr4.2:86138298-86138317 | None:intergenic | 35.0% | |
ACCAAATTCACCGAATCAAA+AGG | - | chr4.2:86139431-86139450 | None:intergenic | 35.0% | |
AGAGATGAAGATGTAAGAGT+AGG | + | chr4.2:86137114-86137133 | MS.gene89899:CDS | 35.0% | |
AGTAATAAATGCTCCTCAGT+TGG | + | chr4.2:86137351-86137370 | MS.gene89899:CDS | 35.0% | |
ATGGTAACTCGAGTTAAAGT+CGG | - | chr4.2:86137946-86137965 | None:intergenic | 35.0% | |
ATTAATCCAGCTAGAAGTCT+AGG | + | chr4.2:86139186-86139205 | MS.gene89899:CDS | 35.0% | |
ATTTAGGCTTACAGGAACAT+GGG | - | chr4.2:86138688-86138707 | None:intergenic | 35.0% | |
CAAGGTCATGCATATGAAAT+TGG | + | chr4.2:86137592-86137611 | MS.gene89899:intron | 35.0% | |
CAATTTCATATGCATGACCT+TGG | - | chr4.2:86137594-86137613 | None:intergenic | 35.0% | |
CCCACTTATTCTCCTTAAAA+AGG | + | chr4.2:86138800-86138819 | MS.gene89899:intron | 35.0% | |
CTCAATAAAGGTTACTCCAT+AGG | + | chr4.2:86138573-86138592 | MS.gene89899:CDS | 35.0% | |
GGAAATACTAACTAGTATCC+TGG | - | chr4.2:86138323-86138342 | None:intergenic | 35.0% | |
GGACATTGCATAATATATGC+AGG | + | chr4.2:86138753-86138772 | MS.gene89899:intron | 35.0% | |
TATTTAGGCTTACAGGAACA+TGG | - | chr4.2:86138689-86138708 | None:intergenic | 35.0% | |
TGGCTACAATTCCAATTACA+GGG | + | chr4.2:86139157-86139176 | MS.gene89899:CDS | 35.0% | |
TGTCTATTTACAAATGCAGG+TGG | + | chr4.2:86138381-86138400 | MS.gene89899:intron | 35.0% | |
TTAATACCAGTCCCTGTAAT+TGG | - | chr4.2:86139171-86139190 | None:intergenic | 35.0% | |
TTGGCTACAATTCCAATTAC+AGG | + | chr4.2:86139156-86139175 | MS.gene89899:CDS | 35.0% | |
! | AGTGACATTTGGACTTTTCT+TGG | + | chr4.2:86138419-86138438 | MS.gene89899:CDS | 35.0% |
! | GGCTAGAATTTCCCTTTTTA+AGG | - | chr4.2:86138815-86138834 | None:intergenic | 35.0% |
! | GTAACCTTTATTGAGAGTGT+TGG | - | chr4.2:86138568-86138587 | None:intergenic | 35.0% |
!! | AACTGAGGAGCATTTATTAC+TGG | - | chr4.2:86137352-86137371 | None:intergenic | 35.0% |
!! | CCCTTTTTAAGGAGAATAAG+TGG | - | chr4.2:86138804-86138823 | None:intergenic | 35.0% |
!!! | TCCTTTTGATTCGGTGAATT+TGG | + | chr4.2:86139427-86139446 | MS.gene89899:intron | 35.0% |
AAAAGTCCAAATGTCACTGC+AGG | - | chr4.2:86138417-86138436 | None:intergenic | 40.0% | |
AAAGGTTACTCCATAGGTGA+TGG | + | chr4.2:86138579-86138598 | MS.gene89899:CDS | 40.0% | |
AAAGTCCAAATGTCACTGCA+GGG | - | chr4.2:86138416-86138435 | None:intergenic | 40.0% | |
AATTCCTTGAACACCAACTG+AGG | - | chr4.2:86137367-86137386 | None:intergenic | 40.0% | |
ACAAGTCTGAGTCTTGACAA+TGG | - | chr4.2:86137965-86137984 | None:intergenic | 40.0% | |
ACAATTCCAATTACAGGGAC+TGG | + | chr4.2:86139162-86139181 | MS.gene89899:CDS | 40.0% | |
ACACTTTGTAAAGTGAAGGG+TGG | - | chr4.2:86138104-86138123 | None:intergenic | 40.0% | |
AGACTTCTTAACATGTGTCC+AGG | + | chr4.2:86138302-86138321 | MS.gene89899:intron | 40.0% | |
AGCATGGAGAGTTATCATCA+TGG | + | chr4.2:86137238-86137257 | MS.gene89899:CDS | 40.0% | |
ATACAACAAGGACCAAGCTT+GGG | + | chr4.2:86139221-86139240 | MS.gene89899:CDS | 40.0% | |
ATTAACCCTGCAGTGACATT+TGG | + | chr4.2:86138408-86138427 | MS.gene89899:CDS | 40.0% | |
GGTCATGCATATGAAATTGG+AGG | + | chr4.2:86137595-86137614 | MS.gene89899:intron | 40.0% | |
TATACAACAAGGACCAAGCT+TGG | + | chr4.2:86139220-86139239 | MS.gene89899:CDS | 40.0% | |
TATTGTACTGCTGGTATCTC+AGG | + | chr4.2:86137423-86137442 | MS.gene89899:CDS | 40.0% | |
TCGACCCTCATAGTAAAAGT+AGG | + | chr4.2:86137619-86137638 | MS.gene89899:intron | 40.0% | |
TGCTGCTCTTGTATACAACA+AGG | + | chr4.2:86139209-86139228 | MS.gene89899:CDS | 40.0% | |
TGGTGTTCAAGGAATTGCTT+GGG | + | chr4.2:86137371-86137390 | MS.gene89899:CDS | 40.0% | |
! | AACCCTAGTACTTTGAGAAC+CGG | + | chr4.2:86139605-86139624 | MS.gene89899:intron | 40.0% |
! | CAAGACTTGGACTTCTAGTT+TGG | - | chr4.2:86138989-86139008 | None:intergenic | 40.0% |
! | CAGGAGTCCAAACTTTTTAG+AGG | - | chr4.2:86138043-86138062 | None:intergenic | 40.0% |
! | GCTCTTGTTTATTGTACTGC+TGG | + | chr4.2:86137414-86137433 | MS.gene89899:CDS | 40.0% |
! | TCAGCACCTTTATTTGAGCA+TGG | + | chr4.2:86137222-86137241 | MS.gene89899:CDS | 40.0% |
! | TTCCCTGCCTCTAAAAAGTT+TGG | + | chr4.2:86138033-86138052 | MS.gene89899:intron | 40.0% |
! | TTCTTGAGTCCCATCACTTT+TGG | + | chr4.2:86137857-86137876 | MS.gene89899:intron | 40.0% |
! | TTGGTGTTCAAGGAATTGCT+TGG | + | chr4.2:86137370-86137389 | MS.gene89899:CDS | 40.0% |
!! | AGTCCAAACTTTTTAGAGGC+AGG | - | chr4.2:86138039-86138058 | None:intergenic | 40.0% |
!! | CAATGTTTGGGTGCTATTTG+TGG | + | chr4.2:86138486-86138505 | MS.gene89899:CDS | 40.0% |
!! | GTCCAAACTTTTTAGAGGCA+GGG | - | chr4.2:86138038-86138057 | None:intergenic | 40.0% |
!! | TCACTTTGACTTGAAAGGGA+TGG | - | chr4.2:86139942-86139961 | None:intergenic | 40.0% |
!! | TGCTCAAATAAAGGTGCTGA+AGG | - | chr4.2:86137222-86137241 | None:intergenic | 40.0% |
!! | TGCTGTCTTTTTGGTGCATT+TGG | + | chr4.2:86139137-86139156 | MS.gene89899:CDS | 40.0% |
!! | TGGCTCTGATGACTATTTGA+TGG | - | chr4.2:86139922-86139941 | None:intergenic | 40.0% |
!! | TTTGGTGCAGTGGATTTTCT+GGG | + | chr4.2:86139859-86139878 | MS.gene89899:intron | 40.0% |
!! | TTTTGGTGCAGTGGATTTTC+TGG | + | chr4.2:86139858-86139877 | MS.gene89899:intron | 40.0% |
ACAGCAAATCCAATTGGCAG+TGG | - | chr4.2:86139123-86139142 | None:intergenic | 45.0% | |
AGGGAAACACACATTTGGCA+CGG | - | chr4.2:86138019-86138038 | None:intergenic | 45.0% | |
CACCAATATGAGAGACTTGG+TGG | + | chr4.2:86138537-86138556 | MS.gene89899:CDS | 45.0% | |
CACCACCAAGTCTCTCATAT+TGG | - | chr4.2:86138542-86138561 | None:intergenic | 45.0% | |
CATGGTCTTTCTATAGGGCT+GGG | + | chr4.2:86137256-86137275 | MS.gene89899:CDS | 45.0% | |
CCAAGTCTCTCATATTGGTG+TGG | - | chr4.2:86138537-86138556 | None:intergenic | 45.0% | |
CCACACCAATATGAGAGACT+TGG | + | chr4.2:86138534-86138553 | MS.gene89899:CDS | 45.0% | |
CTCGAGTTAAAGTCGGACAT+TGG | - | chr4.2:86137939-86137958 | None:intergenic | 45.0% | |
GAGTTAAAGTCGGACATTGG+TGG | - | chr4.2:86137936-86137955 | None:intergenic | 45.0% | |
GATTGAGCAGCAGTTCCTAT+TGG | - | chr4.2:86137165-86137184 | None:intergenic | 45.0% | |
GGAGTCTCTTGCATTTCTCT+TGG | - | chr4.2:86138667-86138686 | None:intergenic | 45.0% | |
GGTGCCAACACTCTCAATAA+AGG | + | chr4.2:86138561-86138580 | MS.gene89899:CDS | 45.0% | |
GTCTCTCATATTGGTGTGGT+TGG | - | chr4.2:86138533-86138552 | None:intergenic | 45.0% | |
TCATGGTCTTTCTATAGGGC+TGG | + | chr4.2:86137255-86137274 | MS.gene89899:CDS | 45.0% | |
TGCATAATATATGCAGGGGC+CGG | + | chr4.2:86138759-86138778 | MS.gene89899:intron | 45.0% | |
TTTCTTTCTTTGAGTGGGGG+TGG | + | chr4.2:86137815-86137834 | MS.gene89899:intron | 45.0% | |
! | AGGAGAATAAGTGGGGTGTT+CGG | - | chr4.2:86138795-86138814 | None:intergenic | 45.0% |
! | CAAGGAATTGCTTGGGCTTT+TGG | + | chr4.2:86137378-86137397 | MS.gene89899:CDS | 45.0% |
! | CTCCGGTTCTCAAAGTACTA+GGG | - | chr4.2:86139610-86139629 | None:intergenic | 45.0% |
! | TCTCCGGTTCTCAAAGTACT+AGG | - | chr4.2:86139611-86139630 | None:intergenic | 45.0% |
! | TGAGCTTAGCTCAGTTGGTA+GGG | + | chr4.2:86138732-86138751 | MS.gene89899:intron | 45.0% |
!! | ATTTTGGCACCACTGCCAAT+TGG | + | chr4.2:86139111-86139130 | MS.gene89899:CDS | 45.0% |
!! | CAATATGAGAGACTTGGTGG+TGG | + | chr4.2:86138540-86138559 | MS.gene89899:CDS | 45.0% |
!! | CGGGCCTACTTTTACTATGA+GGG | - | chr4.2:86137626-86137645 | None:intergenic | 45.0% |
!! | TACTCCATAGGTGATGGACT+TGG | + | chr4.2:86138585-86138604 | MS.gene89899:CDS | 45.0% |
!! | TGCAGTGGATTTTCTGGGTA+GGG | + | chr4.2:86139864-86139883 | MS.gene89899:intron | 45.0% |
!! | TGTGGTGCTGCTGTTGTTAA+AGG | + | chr4.2:86138504-86138523 | MS.gene89899:CDS | 45.0% |
!! | TTTTAGTTGTTGCGTCGTGC+AGG | - | chr4.2:86138062-86138081 | None:intergenic | 45.0% |
!! | ATTAATTAATTATTTAGTAT+AGG | + | chr4.2:86139763-86139782 | MS.gene89899:intron | 5.0% |
!! | TTCTAAATAAAATTAAATTA+TGG | - | chr4.2:86139291-86139310 | None:intergenic | 5.0% |
ACCAACTGAGCTAAGCTCAC+AGG | - | chr4.2:86138731-86138750 | None:intergenic | 50.0% | |
AGCTGGGCTCCAAAAGTGAT+GGG | - | chr4.2:86137869-86137888 | None:intergenic | 50.0% | |
CATAATATATGCAGGGGCCG+GGG | + | chr4.2:86138761-86138780 | MS.gene89899:intron | 50.0% | |
CCAACTGAGCTAAGCTCACA+GGG | - | chr4.2:86138730-86138749 | None:intergenic | 50.0% | |
CGCGCAAGCTATCTCTAACT+AGG | + | chr4.2:86138442-86138461 | MS.gene89899:CDS | 50.0% | |
CTTTGAGTGGGGGTGGATAT+TGG | + | chr4.2:86137822-86137841 | MS.gene89899:intron | 50.0% | |
GAACTGTTTGCACTCCCCAA+AGG | + | chr4.2:86137894-86137913 | MS.gene89899:intron | 50.0% | |
GAGCAGCAGTTCCTATTGGT+TGG | - | chr4.2:86137161-86137180 | None:intergenic | 50.0% | |
GAGGCAGGGAAACACACATT+TGG | - | chr4.2:86138024-86138043 | None:intergenic | 50.0% | |
GCAAACAGTTCAACCGAGCT+GGG | - | chr4.2:86137885-86137904 | None:intergenic | 50.0% | |
GCATAATATATGCAGGGGCC+GGG | + | chr4.2:86138760-86138779 | MS.gene89899:intron | 50.0% | |
GGACTTGGAGCAGAGATTGT+TGG | + | chr4.2:86138600-86138619 | MS.gene89899:CDS | 50.0% | |
GTGAGCTTAGCTCAGTTGGT+AGG | + | chr4.2:86138731-86138750 | MS.gene89899:intron | 50.0% | |
TAACATGGTCGTCCCAAGCT+TGG | - | chr4.2:86139236-86139255 | None:intergenic | 50.0% | |
TGCAAACAGTTCAACCGAGC+TGG | - | chr4.2:86137886-86137905 | None:intergenic | 50.0% | |
TGCTCCAAGTCCATCACCTA+TGG | - | chr4.2:86138592-86138611 | None:intergenic | 50.0% | |
TGTTTGCACTCCCCAAAGGA+CGG | + | chr4.2:86137898-86137917 | MS.gene89899:intron | 50.0% | |
TTTGGCACGGTCGCACAATT+TGG | - | chr4.2:86138006-86138025 | None:intergenic | 50.0% | |
! | GAGAATAAGTGGGGTGTTCG+GGG | - | chr4.2:86138793-86138812 | None:intergenic | 50.0% |
! | GGAATTGCTTGGGCTTTTGG+TGG | + | chr4.2:86137381-86137400 | MS.gene89899:CDS | 50.0% |
! | GGAGAATAAGTGGGGTGTTC+GGG | - | chr4.2:86138794-86138813 | None:intergenic | 50.0% |
! | TGCTCCTCAGTTGGTGTTCA+AGG | + | chr4.2:86137360-86137379 | MS.gene89899:CDS | 50.0% |
!! | GCGGGCCTACTTTTACTATG+AGG | - | chr4.2:86137627-86137646 | None:intergenic | 50.0% |
!! | GTGCAGTGGATTTTCTGGGT+AGG | + | chr4.2:86139863-86139882 | MS.gene89899:intron | 50.0% |
!!! | ATCACTTTTGGAGCCCAGCT+CGG | + | chr4.2:86137869-86137888 | MS.gene89899:intron | 50.0% |
ACCAATCCAGGTCCGTCCTT+TGG | - | chr4.2:86137913-86137932 | None:intergenic | 55.0% | |
CAATCCAGGTCCGTCCTTTG+GGG | - | chr4.2:86137911-86137930 | None:intergenic | 55.0% | |
CCAATCCAGGTCCGTCCTTT+GGG | - | chr4.2:86137912-86137931 | None:intergenic | 55.0% | |
CCCTGTGAGCTTAGCTCAGT+TGG | + | chr4.2:86138727-86138746 | MS.gene89899:intron | 55.0% | |
GAGCTGGGCTCCAAAAGTGA+TGG | - | chr4.2:86137870-86137889 | None:intergenic | 55.0% | |
GCAGCACCTAGACTTCTAGC+TGG | - | chr4.2:86139195-86139214 | None:intergenic | 55.0% | |
GGCTGGGATTGCTGAGTTTG+TGG | + | chr4.2:86137272-86137291 | MS.gene89899:CDS | 55.0% | |
TTCTGGGTAGGGCCTTTCAC+TGG | + | chr4.2:86139875-86139894 | MS.gene89899:CDS | 55.0% | |
! | GCAAGTGCTGCTCCAGTGAA+AGG | - | chr4.2:86139890-86139909 | None:intergenic | 55.0% |
! | GGACATTGGTGGACCAATCC+AGG | - | chr4.2:86137925-86137944 | None:intergenic | 55.0% |
CCCAAAGGACGGACCTGGAT+TGG | + | chr4.2:86137909-86137928 | MS.gene89899:intron | 60.0% | |
CACTCCCCAAAGGACGGACC+TGG | + | chr4.2:86137904-86137923 | MS.gene89899:intron | 65.0% | |
GGTGTTCGGGGTTCGAACCC+CGG | - | chr4.2:86138781-86138800 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 86137105 | 86139961 | 86137105 | ID=MS.gene89899 |
chr4.2 | mRNA | 86137105 | 86139961 | 86137105 | ID=MS.gene89899.t1;Parent=MS.gene89899 |
chr4.2 | exon | 86137105 | 86137444 | 86137105 | ID=MS.gene89899.t1.exon1;Parent=MS.gene89899.t1 |
chr4.2 | CDS | 86137105 | 86137444 | 86137105 | ID=cds.MS.gene89899.t1;Parent=MS.gene89899.t1 |
chr4.2 | exon | 86138400 | 86138695 | 86138400 | ID=MS.gene89899.t1.exon2;Parent=MS.gene89899.t1 |
chr4.2 | CDS | 86138400 | 86138695 | 86138400 | ID=cds.MS.gene89899.t1;Parent=MS.gene89899.t1 |
chr4.2 | exon | 86139111 | 86139251 | 86139111 | ID=MS.gene89899.t1.exon3;Parent=MS.gene89899.t1 |
chr4.2 | CDS | 86139111 | 86139251 | 86139111 | ID=cds.MS.gene89899.t1;Parent=MS.gene89899.t1 |
chr4.2 | exon | 86139869 | 86139961 | 86139869 | ID=MS.gene89899.t1.exon4;Parent=MS.gene89899.t1 |
chr4.2 | CDS | 86139869 | 86139961 | 86139869 | ID=cds.MS.gene89899.t1;Parent=MS.gene89899.t1 |
Gene Sequence |
Protein sequence |