Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021394.t1 | TKY74560.1 | 80.1 | 246 | 49 | 0 | 1 | 246 | 1 | 246 | 7.70E-107 | 396.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021394.t1 | O82316 | 66.5 | 245 | 82 | 0 | 1 | 245 | 1 | 245 | 4.0e-88 | 325.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021394.t1 | A0A371FKI7 | 78.9 | 246 | 52 | 0 | 1 | 246 | 1 | 246 | 1.2e-106 | 395.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021394.t1 | MTR_1g006590 | 93.117 | 247 | 17 | 0 | 1 | 247 | 1 | 247 | 6.51e-168 | 463 |
MS.gene021394.t1 | MTR_1g006490 | 86.235 | 247 | 34 | 0 | 1 | 247 | 1 | 247 | 2.52e-156 | 434 |
MS.gene021394.t1 | MTR_8g013680 | 53.629 | 248 | 109 | 3 | 1 | 243 | 1 | 247 | 2.89e-85 | 254 |
MS.gene021394.t1 | MTR_2g101370 | 52.049 | 244 | 113 | 2 | 4 | 243 | 5 | 248 | 3.29e-83 | 249 |
MS.gene021394.t1 | MTR_4g063090 | 51.250 | 240 | 113 | 2 | 1 | 236 | 3 | 242 | 2.58e-77 | 234 |
MS.gene021394.t1 | MTR_1g115405 | 48.560 | 243 | 120 | 3 | 3 | 240 | 5 | 247 | 6.66e-75 | 228 |
MS.gene021394.t1 | MTR_7g103030 | 52.282 | 241 | 110 | 3 | 1 | 237 | 3 | 242 | 9.25e-75 | 228 |
MS.gene021394.t1 | MTR_5g012810 | 49.398 | 249 | 118 | 4 | 1 | 244 | 1 | 246 | 1.67e-74 | 227 |
MS.gene021394.t1 | MTR_7g023350 | 50.617 | 243 | 115 | 3 | 3 | 240 | 5 | 247 | 3.93e-72 | 221 |
MS.gene021394.t1 | MTR_1g077540 | 42.520 | 254 | 135 | 3 | 2 | 244 | 4 | 257 | 1.61e-66 | 207 |
MS.gene021394.t1 | MTR_6g069040 | 43.825 | 251 | 133 | 3 | 2 | 244 | 4 | 254 | 4.58e-66 | 206 |
MS.gene021394.t1 | MTR_2g060360 | 38.261 | 230 | 131 | 3 | 10 | 232 | 10 | 235 | 2.02e-48 | 160 |
MS.gene021394.t1 | MTR_5g063930 | 34.351 | 262 | 140 | 8 | 3 | 247 | 14 | 260 | 5.37e-32 | 118 |
MS.gene021394.t1 | MTR_2g094270 | 34.749 | 259 | 133 | 11 | 10 | 241 | 31 | 280 | 5.16e-31 | 116 |
MS.gene021394.t1 | MTR_7g101190 | 35.223 | 247 | 135 | 9 | 9 | 234 | 29 | 271 | 2.45e-30 | 114 |
MS.gene021394.t1 | MTR_4g059390 | 34.981 | 263 | 126 | 13 | 10 | 241 | 30 | 278 | 9.93e-29 | 110 |
MS.gene021394.t1 | MTR_2g017620 | 34.764 | 233 | 143 | 6 | 18 | 247 | 23 | 249 | 1.20e-27 | 106 |
MS.gene021394.t1 | MTR_2g017620 | 34.764 | 233 | 143 | 6 | 18 | 247 | 37 | 263 | 2.23e-27 | 106 |
MS.gene021394.t1 | MTR_3g118010 | 34.043 | 235 | 128 | 10 | 19 | 234 | 37 | 263 | 3.33e-27 | 106 |
MS.gene021394.t1 | MTR_5g079570 | 35.652 | 230 | 139 | 7 | 18 | 245 | 39 | 261 | 3.40e-27 | 105 |
MS.gene021394.t1 | MTR_1g070385 | 32.877 | 219 | 138 | 6 | 16 | 232 | 59 | 270 | 1.77e-26 | 107 |
MS.gene021394.t1 | MTR_4g415300 | 35.217 | 230 | 123 | 9 | 19 | 229 | 56 | 278 | 3.62e-26 | 103 |
MS.gene021394.t1 | MTR_3g008920 | 35.616 | 219 | 128 | 8 | 18 | 232 | 25 | 234 | 8.81e-26 | 102 |
MS.gene021394.t1 | MTR_4g006730 | 35.122 | 205 | 113 | 7 | 24 | 220 | 80 | 272 | 1.32e-25 | 102 |
MS.gene021394.t1 | MTR_5g010150 | 34.335 | 233 | 122 | 9 | 19 | 229 | 52 | 275 | 1.40e-25 | 102 |
MS.gene021394.t1 | MTR_1g097840 | 35.981 | 214 | 118 | 7 | 19 | 225 | 74 | 275 | 2.12e-25 | 101 |
MS.gene021394.t1 | MTR_2g017590 | 33.333 | 249 | 156 | 7 | 2 | 247 | 20 | 261 | 6.66e-25 | 99.8 |
MS.gene021394.t1 | MTR_8g098375 | 34.034 | 238 | 125 | 10 | 19 | 234 | 52 | 279 | 9.95e-25 | 99.8 |
MS.gene021394.t1 | MTR_2g017660 | 34.222 | 225 | 137 | 8 | 18 | 239 | 38 | 254 | 1.74e-24 | 99.0 |
MS.gene021394.t1 | MTR_2g104940 | 35.784 | 204 | 113 | 7 | 24 | 220 | 85 | 277 | 4.80e-24 | 98.2 |
MS.gene021394.t1 | MTR_1g095070 | 36.508 | 189 | 96 | 8 | 62 | 234 | 25 | 205 | 7.74e-24 | 95.9 |
MS.gene021394.t1 | MTR_4g006630 | 35.025 | 197 | 108 | 7 | 32 | 220 | 1 | 185 | 1.98e-23 | 94.7 |
MS.gene021394.t1 | MTR_4g006730 | 35.025 | 197 | 108 | 7 | 32 | 220 | 1 | 185 | 2.20e-23 | 94.7 |
MS.gene021394.t1 | MTR_5g082070 | 34.025 | 241 | 128 | 10 | 10 | 228 | 46 | 277 | 7.29e-23 | 94.7 |
MS.gene021394.t1 | MTR_3g070210 | 30.612 | 245 | 142 | 8 | 10 | 234 | 46 | 282 | 8.38e-23 | 94.7 |
MS.gene021394.t1 | MTR_4g084880 | 34.061 | 229 | 136 | 9 | 18 | 240 | 34 | 253 | 1.14e-22 | 94.0 |
MS.gene021394.t1 | MTR_8g087720 | 32.510 | 243 | 152 | 9 | 1 | 240 | 21 | 254 | 2.57e-22 | 92.8 |
MS.gene021394.t1 | MTR_7g010650 | 33.175 | 211 | 135 | 4 | 19 | 228 | 37 | 242 | 3.24e-22 | 92.8 |
MS.gene021394.t1 | MTR_2g094270 | 34.649 | 228 | 114 | 10 | 10 | 210 | 31 | 250 | 9.17e-22 | 91.3 |
MS.gene021394.t1 | MTR_8g087710 | 31.858 | 226 | 143 | 8 | 18 | 240 | 38 | 255 | 2.22e-21 | 90.5 |
MS.gene021394.t1 | MTR_2g017610 | 32.000 | 225 | 137 | 7 | 7 | 221 | 19 | 237 | 1.95e-20 | 87.8 |
MS.gene021394.t1 | MTR_2g017620 | 34.254 | 181 | 113 | 4 | 69 | 247 | 6 | 182 | 3.11e-20 | 85.5 |
MS.gene021394.t1 | MTR_2g017570 | 31.556 | 225 | 138 | 7 | 7 | 221 | 19 | 237 | 8.39e-20 | 86.3 |
MS.gene021394.t1 | MTR_4g075570 | 28.731 | 268 | 159 | 8 | 3 | 247 | 36 | 294 | 1.45e-15 | 75.1 |
MS.gene021394.t1 | MTR_4g075590 | 29.555 | 247 | 145 | 7 | 10 | 234 | 28 | 267 | 3.25e-15 | 73.9 |
MS.gene021394.t1 | MTR_3g070210 | 29.018 | 224 | 132 | 8 | 10 | 213 | 46 | 262 | 3.19e-14 | 70.9 |
MS.gene021394.t1 | MTR_1g095070 | 34.545 | 165 | 85 | 7 | 62 | 210 | 25 | 182 | 7.22e-14 | 68.6 |
MS.gene021394.t1 | MTR_4g006730 | 34.118 | 170 | 92 | 7 | 24 | 185 | 80 | 237 | 4.60e-13 | 67.4 |
MS.gene021394.t1 | MTR_1g097840 | 33.333 | 174 | 98 | 6 | 19 | 185 | 74 | 236 | 3.28e-12 | 65.1 |
MS.gene021394.t1 | MTR_4g059390 | 32.979 | 188 | 89 | 10 | 10 | 173 | 30 | 204 | 7.82e-12 | 63.2 |
MS.gene021394.t1 | MTR_4g415300 | 33.333 | 165 | 91 | 7 | 19 | 171 | 56 | 213 | 1.03e-11 | 63.2 |
MS.gene021394.t1 | MTR_5g010150 | 31.765 | 170 | 92 | 7 | 19 | 173 | 52 | 212 | 4.52e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021394.t1 | AT2G25810 | 75.510 | 245 | 60 | 0 | 1 | 245 | 1 | 245 | 3.36e-128 | 363 |
MS.gene021394.t1 | AT2G36830 | 53.279 | 244 | 110 | 2 | 1 | 240 | 3 | 246 | 4.43e-86 | 256 |
MS.gene021394.t1 | AT3G16240 | 52.439 | 246 | 110 | 4 | 1 | 240 | 1 | 245 | 1.25e-83 | 250 |
MS.gene021394.t1 | AT3G26520 | 52.991 | 234 | 106 | 2 | 7 | 236 | 10 | 243 | 2.85e-81 | 244 |
MS.gene021394.t1 | AT5G47450 | 52.321 | 237 | 109 | 2 | 1 | 233 | 1 | 237 | 5.97e-80 | 241 |
MS.gene021394.t1 | AT4G17340 | 51.200 | 250 | 115 | 3 | 1 | 245 | 1 | 248 | 2.59e-77 | 234 |
MS.gene021394.t1 | AT4G01470 | 48.996 | 249 | 122 | 3 | 1 | 244 | 3 | 251 | 5.86e-75 | 228 |
MS.gene021394.t1 | AT1G73190 | 49.367 | 237 | 111 | 2 | 6 | 233 | 11 | 247 | 1.34e-70 | 218 |
MS.gene021394.t1 | AT1G17810 | 47.266 | 256 | 118 | 3 | 6 | 244 | 11 | 266 | 2.61e-68 | 212 |
MS.gene021394.t1 | AT3G47440 | 42.152 | 223 | 122 | 3 | 16 | 233 | 20 | 240 | 1.74e-49 | 163 |
MS.gene021394.t1 | AT5G60660 | 33.333 | 252 | 145 | 9 | 10 | 241 | 30 | 278 | 2.48e-31 | 117 |
MS.gene021394.t1 | AT2G37170 | 34.000 | 250 | 132 | 10 | 10 | 234 | 71 | 312 | 1.53e-30 | 115 |
MS.gene021394.t1 | AT2G37180 | 34.538 | 249 | 136 | 10 | 10 | 236 | 28 | 271 | 1.87e-30 | 114 |
MS.gene021394.t1 | AT2G37170 | 33.730 | 252 | 134 | 10 | 10 | 236 | 28 | 271 | 2.14e-30 | 114 |
MS.gene021394.t1 | AT4G35100 | 35.685 | 241 | 130 | 11 | 19 | 241 | 38 | 271 | 3.63e-30 | 114 |
MS.gene021394.t1 | AT4G35100 | 35.685 | 241 | 130 | 11 | 19 | 241 | 38 | 271 | 3.63e-30 | 114 |
MS.gene021394.t1 | AT3G53420 | 34.874 | 238 | 132 | 10 | 19 | 236 | 39 | 273 | 1.59e-28 | 109 |
MS.gene021394.t1 | AT3G53420 | 34.874 | 238 | 132 | 10 | 19 | 236 | 39 | 273 | 1.59e-28 | 109 |
MS.gene021394.t1 | AT2G39010 | 32.114 | 246 | 142 | 9 | 10 | 234 | 29 | 270 | 2.24e-28 | 109 |
MS.gene021394.t1 | AT3G54820 | 32.627 | 236 | 136 | 9 | 19 | 234 | 38 | 270 | 1.33e-27 | 107 |
MS.gene021394.t1 | AT2G16850 | 33.061 | 245 | 141 | 10 | 19 | 246 | 36 | 274 | 9.40e-27 | 105 |
MS.gene021394.t1 | AT1G80760 | 35.238 | 210 | 118 | 6 | 19 | 221 | 80 | 278 | 8.25e-26 | 102 |
MS.gene021394.t1 | AT4G00430 | 34.934 | 229 | 125 | 9 | 19 | 229 | 53 | 275 | 1.52e-25 | 102 |
MS.gene021394.t1 | AT1G01620 | 33.913 | 230 | 126 | 9 | 19 | 229 | 52 | 274 | 1.26e-24 | 99.4 |
MS.gene021394.t1 | AT4G10380 | 34.222 | 225 | 130 | 6 | 19 | 236 | 78 | 291 | 2.97e-24 | 99.0 |
MS.gene021394.t1 | AT5G37820 | 35.808 | 229 | 128 | 8 | 19 | 240 | 43 | 259 | 3.89e-24 | 98.2 |
MS.gene021394.t1 | AT4G23400 | 33.913 | 230 | 126 | 9 | 19 | 229 | 53 | 275 | 6.10e-24 | 97.8 |
MS.gene021394.t1 | AT5G37820 | 35.808 | 229 | 128 | 8 | 19 | 240 | 79 | 295 | 6.26e-24 | 98.2 |
MS.gene021394.t1 | AT4G19030 | 33.621 | 232 | 138 | 8 | 18 | 240 | 54 | 278 | 6.67e-24 | 97.8 |
MS.gene021394.t1 | AT2G45960 | 34.061 | 229 | 125 | 9 | 19 | 228 | 52 | 273 | 9.65e-24 | 97.1 |
MS.gene021394.t1 | AT3G61430 | 34.061 | 229 | 125 | 9 | 19 | 228 | 52 | 273 | 9.85e-24 | 97.1 |
MS.gene021394.t1 | AT3G61430 | 34.061 | 229 | 125 | 9 | 19 | 228 | 52 | 273 | 9.85e-24 | 97.1 |
MS.gene021394.t1 | AT1G31885 | 35.681 | 213 | 123 | 5 | 18 | 221 | 42 | 249 | 1.66e-23 | 97.1 |
MS.gene021394.t1 | AT4G18910 | 33.476 | 233 | 137 | 7 | 18 | 240 | 51 | 275 | 1.77e-23 | 96.7 |
MS.gene021394.t1 | AT5G37810 | 35.000 | 240 | 132 | 9 | 12 | 240 | 33 | 259 | 2.07e-23 | 96.3 |
MS.gene021394.t1 | AT1G52180 | 50.000 | 84 | 42 | 0 | 125 | 208 | 39 | 122 | 4.09e-23 | 91.3 |
MS.gene021394.t1 | AT1G01620 | 33.014 | 209 | 118 | 8 | 36 | 229 | 1 | 202 | 6.78e-21 | 87.8 |
MS.gene021394.t1 | AT3G06100 | 31.193 | 218 | 141 | 6 | 16 | 230 | 43 | 254 | 1.40e-20 | 88.2 |
MS.gene021394.t1 | AT3G06100 | 31.905 | 210 | 134 | 6 | 24 | 230 | 3 | 206 | 1.45e-19 | 84.7 |
MS.gene021394.t1 | AT1G31885 | 36.000 | 175 | 100 | 4 | 56 | 221 | 24 | 195 | 3.89e-19 | 84.3 |
MS.gene021394.t1 | AT2G34390 | 30.000 | 220 | 141 | 6 | 18 | 229 | 47 | 261 | 9.65e-16 | 75.1 |
MS.gene021394.t1 | AT2G34390 | 29.954 | 217 | 139 | 6 | 21 | 229 | 8 | 219 | 6.73e-15 | 72.4 |
MS.gene021394.t1 | AT2G45960 | 31.754 | 211 | 118 | 9 | 19 | 210 | 52 | 255 | 6.98e-15 | 72.8 |
MS.gene021394.t1 | AT2G45960 | 31.754 | 211 | 118 | 9 | 19 | 210 | 52 | 255 | 7.16e-15 | 72.8 |
Find 79 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAAGAAAGGAGGACTTTC+TGG | 0.139053 | 1.2:-12479570 | MS.gene021394:CDS |
ACAACAAATCCAACCAAAAT+TGG | 0.151579 | 1.2:+12479540 | None:intergenic |
CTCATTGGTGGTGGGCTTGC+TGG | 0.168087 | 1.2:-12479396 | MS.gene021394:CDS |
TTCTGGACTTGGCCCAATTT+TGG | 0.189335 | 1.2:-12479553 | MS.gene021394:CDS |
CCAGAAAGTCCTCCTTTCTT+TGG | 0.192856 | 1.2:+12479570 | None:intergenic |
ACCTTTCTCTTTGTCTTTGC+TGG | 0.204008 | 1.2:-12483517 | MS.gene021394:CDS |
CTGCATTGGTTAGTGGAAAT+TGG | 0.223669 | 1.2:-12479449 | MS.gene021394:CDS |
ATGAATCCAGCAAGATCTTT+TGG | 0.260996 | 1.2:-12479474 | MS.gene021394:CDS |
GGTTGTTCCTAAAGAGATTT+TGG | 0.265315 | 1.2:+12483594 | None:intergenic |
TCATCCGTTCTATCTTATAT+TGG | 0.274042 | 1.2:-12482884 | MS.gene021394:CDS |
CTCTTTGTCTTTGCTGGTGT+TGG | 0.290840 | 1.2:-12483511 | MS.gene021394:CDS |
ATTAGAGCTTGGATGCAATT+AGG | 0.307628 | 1.2:+12483556 | None:intergenic |
ATATCCGCCGGTCACGTTTC+CGG | 0.326886 | 1.2:-12482963 | MS.gene021394:CDS |
TTTGAATCCCGCCGTGACCT+TGG | 0.347716 | 1.2:-12482934 | MS.gene021394:CDS |
AATATGACCAAAATCTCTTT+AGG | 0.363930 | 1.2:-12483601 | MS.gene021394:CDS |
GGGCTAACATCTTGGCTGGC+GGG | 0.363981 | 1.2:-12479515 | MS.gene021394:CDS |
GGCTATGGCACAAACTCTTC+TGG | 0.370987 | 1.2:-12482997 | MS.gene021394:CDS |
TTGAATCCCGCCGTGACCTT+GGG | 0.371209 | 1.2:-12482933 | MS.gene021394:CDS |
GGTGTACTCAAGGAGTAGTT+TGG | 0.378665 | 1.2:-12479647 | MS.gene021394:CDS |
GTTCACTGTGTATGCAACTA+TGG | 0.382620 | 1.2:-12479598 | MS.gene021394:CDS |
AAAAGATCTTGCTGGATTCA+TGG | 0.384219 | 1.2:+12479476 | None:intergenic |
GTGACCTTGGGCCTCCTTGT+TGG | 0.384806 | 1.2:-12482921 | MS.gene021394:CDS |
TTGGCTGGCGGGGCTTTCGC+AGG | 0.386405 | 1.2:-12479504 | MS.gene021394:CDS |
TTTGGACCTGCATTGGTTAG+TGG | 0.401163 | 1.2:-12479456 | MS.gene021394:CDS |
TGTTGTAGGGGCTAACATCT+TGG | 0.405323 | 1.2:-12479523 | MS.gene021394:CDS |
TTGGGCCTCTCATTGGTGGT+GGG | 0.408100 | 1.2:-12479404 | MS.gene021394:CDS |
ATTAGGTTGAGTAGCCTCTT+GGG | 0.416839 | 1.2:+12483573 | None:intergenic |
TGGGTTGGGCCTCTCATTGG+TGG | 0.430148 | 1.2:-12479408 | MS.gene021394:CDS |
GTTGGGCCTCTCATTGGTGG+TGG | 0.433600 | 1.2:-12479405 | MS.gene021394:CDS |
GCTAAGTGAAGATGGTTTAG+TGG | 0.434560 | 1.2:-12483033 | MS.gene021394:CDS |
CAACAAATCCAACCAAAATT+GGG | 0.439747 | 1.2:+12479541 | None:intergenic |
AAAGGAGGACTTTCTGGACT+TGG | 0.441144 | 1.2:-12479564 | MS.gene021394:CDS |
TATCTTCTTCATTACCTCAC+TGG | 0.445469 | 1.2:-12482828 | MS.gene021394:CDS |
TTAGATAAGCTAAGTGAAGA+TGG | 0.450182 | 1.2:-12483041 | MS.gene021394:intron |
GCAGGTCCAAAAGATCTTGC+TGG | 0.456957 | 1.2:+12479468 | None:intergenic |
TGGAAATTGGACTGACCAAT+GGG | 0.457985 | 1.2:-12479436 | MS.gene021394:CDS |
GGCTAACATCTTGGCTGGCG+GGG | 0.461965 | 1.2:-12479514 | MS.gene021394:CDS |
AATTAGGTTGAGTAGCCTCT+TGG | 0.462527 | 1.2:+12483572 | None:intergenic |
AGGTCACGGCGGGATTCAAA+TGG | 0.475016 | 1.2:+12482937 | None:intergenic |
GTGTACTCAAGGAGTAGTTT+GGG | 0.480313 | 1.2:-12479646 | MS.gene021394:CDS |
AACAAGGAGGCCCAAGGTCA+CGG | 0.484302 | 1.2:+12482923 | None:intergenic |
CATACACTTAAAAGTGGAGT+AGG | 0.484564 | 1.2:-12479669 | MS.gene021394:CDS |
CTTCTTCATTACCTCACTGG+TGG | 0.484926 | 1.2:-12482825 | MS.gene021394:CDS |
CGAATTCAACAATTAGAGCT+TGG | 0.493298 | 1.2:+12483545 | None:intergenic |
CCAGTTCATACACTTAAAAG+TGG | 0.496805 | 1.2:-12479675 | MS.gene021394:CDS |
CGGTGATGTGGCCGCCAACA+AGG | 0.497753 | 1.2:+12482907 | None:intergenic |
GTGGAAATTGGACTGACCAA+TGG | 0.502211 | 1.2:-12479437 | MS.gene021394:CDS |
CTAAGTGAAGATGGTTTAGT+GGG | 0.510777 | 1.2:-12483032 | MS.gene021394:CDS |
ATGGCCACCGGAAACGTGAC+CGG | 0.514153 | 1.2:+12482956 | None:intergenic |
GGGGCTAACATCTTGGCTGG+CGG | 0.514242 | 1.2:-12479516 | MS.gene021394:CDS |
ACCTTGGGCCTCCTTGTTGG+CGG | 0.515259 | 1.2:-12482918 | MS.gene021394:CDS |
AGGAGGCCCAAGGTCACGGC+GGG | 0.520183 | 1.2:+12482927 | None:intergenic |
GTAGGGGCTAACATCTTGGC+TGG | 0.532312 | 1.2:-12479519 | MS.gene021394:CDS |
GTGACCGGCGGATATCATTA+CGG | 0.543565 | 1.2:+12482971 | None:intergenic |
GATCAACATATAGCATCTGC+AGG | 0.544628 | 1.2:-12482858 | MS.gene021394:CDS |
ACCAGCAAAGACAAAGAGAA+AGG | 0.549120 | 1.2:+12483516 | None:intergenic |
CAATTTCCACTAACCAATGC+AGG | 0.555256 | 1.2:+12479450 | None:intergenic |
ACTATGGTTGATCCAAAGAA+AGG | 0.565384 | 1.2:-12479582 | MS.gene021394:CDS |
AACTCATGTTCCTCTCCTTG+TGG | 0.565628 | 1.2:-12479343 | MS.gene021394:CDS |
TTTGGTTGGATTTGTTGTAG+GGG | 0.576606 | 1.2:-12479535 | MS.gene021394:CDS |
GCAAGCCCACCACCAATGAG+AGG | 0.582625 | 1.2:+12479399 | None:intergenic |
GCCGCCAACAAGGAGGCCCA+AGG | 0.586419 | 1.2:+12482917 | None:intergenic |
CAATCCAATATAAGATAGAA+CGG | 0.590776 | 1.2:+12482880 | None:intergenic |
TAGAACGGATGACGGTGATG+TGG | 0.595042 | 1.2:+12482895 | None:intergenic |
CTTTCTTCATCCACAAGGAG+AGG | 0.595545 | 1.2:+12479333 | None:intergenic |
GGCGGGATTCAAATGGCCAC+CGG | 0.596177 | 1.2:+12482944 | None:intergenic |
AGTGGAGTAGGGTGTACTCA+AGG | 0.614383 | 1.2:-12479657 | MS.gene021394:CDS |
AGTAGCTTTCTTCATCCACA+AGG | 0.615821 | 1.2:+12479328 | None:intergenic |
TCCGCCGGTCACGTTTCCGG+TGG | 0.622015 | 1.2:-12482960 | MS.gene021394:CDS |
ATACACTTAAAAGTGGAGTA+GGG | 0.631270 | 1.2:-12479668 | MS.gene021394:CDS |
TATGGCACAAACTCTTCTGG+TGG | 0.643332 | 1.2:-12482994 | MS.gene021394:CDS |
ATATAAGATAGAACGGATGA+CGG | 0.649541 | 1.2:+12482887 | None:intergenic |
ATGGTTGATCCAAAGAAAGG+AGG | 0.657733 | 1.2:-12479579 | MS.gene021394:CDS |
GTGGCCGTAATGATATCCGC+CGG | 0.663799 | 1.2:-12482975 | MS.gene021394:CDS |
GCCACCGGAAACGTGACCGG+CGG | 0.669384 | 1.2:+12482959 | None:intergenic |
CTCTTTAGGAACAACCCAAG+AGG | 0.672884 | 1.2:-12483587 | MS.gene021394:CDS |
AAGGAGGCCCAAGGTCACGG+CGG | 0.691357 | 1.2:+12482926 | None:intergenic |
TGATGTGGCCGCCAACAAGG+AGG | 0.709158 | 1.2:+12482910 | None:intergenic |
CACTTACTAATCCACCAGTG+AGG | 0.739020 | 1.2:+12482814 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTAAAAAAATATTTTTAA+AGG | + | chr1.2:12482045-12482064 | None:intergenic | 0.0% |
!!! | TTATATAAAATTAAATTTTA+TGG | - | chr1.2:12482071-12482090 | MS.gene021394:intron | 0.0% |
!! | TAAAAAAAACATTTATGTAA+AGG | - | chr1.2:12480328-12480347 | MS.gene021394:intron | 10.0% |
!!! | ATATAATTTTATTAAAGGTT+TGG | - | chr1.2:12479557-12479576 | MS.gene021394:CDS | 10.0% |
!!! | ATTTTTTTATGATGTTAATA+TGG | + | chr1.2:12481365-12481384 | None:intergenic | 10.0% |
!!! | TTACATAAATGTTTTTTTTA+AGG | + | chr1.2:12480328-12480347 | None:intergenic | 10.0% |
!!! | TTATCTAATGAAATAAATTT+TGG | + | chr1.2:12479871-12479890 | None:intergenic | 10.0% |
!! | CAATTCAAATATATTGATAT+GGG | + | chr1.2:12479515-12479534 | None:intergenic | 15.0% |
!! | GAAAATATTGTTTGATATTA+TGG | - | chr1.2:12481925-12481944 | MS.gene021394:intron | 15.0% |
!! | TAAATTTCTAAACTTTATCT+TGG | + | chr1.2:12480463-12480482 | None:intergenic | 15.0% |
!! | TCAATTCAAATATATTGATA+TGG | + | chr1.2:12479516-12479535 | None:intergenic | 15.0% |
!!! | AATTAATTTCTAAAGTTTAG+AGG | - | chr1.2:12480420-12480439 | MS.gene021394:intron | 15.0% |
!!! | ATTTTTAACTTCTTAACTTA+GGG | + | chr1.2:12480370-12480389 | None:intergenic | 15.0% |
!!! | CTTCACTTAATTTATTTTAA+GGG | - | chr1.2:12480501-12480520 | MS.gene021394:intron | 15.0% |
!!! | TAACCAAATTAAATTTTTAG+AGG | - | chr1.2:12482195-12482214 | MS.gene021394:intron | 15.0% |
!!! | TAAGAAAAAATTCCTTTTTT+AGG | + | chr1.2:12480661-12480680 | None:intergenic | 15.0% |
!!! | TATTTTTAACTTCTTAACTT+AGG | + | chr1.2:12480371-12480390 | None:intergenic | 15.0% |
!!! | TCTTCACTTAATTTATTTTA+AGG | - | chr1.2:12480500-12480519 | MS.gene021394:intron | 15.0% |
!! | AAATAATGATCAAGATATTC+TGG | - | chr1.2:12483123-12483142 | MS.gene021394:intron | 20.0% |
!! | AATAGAATATTCGTAACATT+GGG | + | chr1.2:12480958-12480977 | None:intergenic | 20.0% |
!! | GCTTAAAGCAAAAAATTTAA+TGG | - | chr1.2:12482019-12482038 | MS.gene021394:intron | 20.0% |
!! | TAAATTAAGTGAAGAATTCA+AGG | + | chr1.2:12480495-12480514 | None:intergenic | 20.0% |
!! | TCTTTATCAATTGTGATAAA+TGG | + | chr1.2:12483103-12483122 | None:intergenic | 20.0% |
!! | TTATTCAATGAACCTAAAAA+AGG | + | chr1.2:12480587-12480606 | None:intergenic | 20.0% |
!! | TTTCAAATTACTATATGTGT+CGG | - | chr1.2:12479701-12479720 | MS.gene021394:intron | 20.0% |
!!! | AAGTCTTTGAGTTAATTTAA+CGG | + | chr1.2:12479834-12479853 | None:intergenic | 20.0% |
!!! | TAAGAAAAGATTCCTTTTTT+AGG | - | chr1.2:12480572-12480591 | MS.gene021394:intron | 20.0% |
!!! | TATCAAACAATATTTTCGTA+AGG | + | chr1.2:12481922-12481941 | None:intergenic | 20.0% |
!!! | TTTTGAAATATGTAGAATGT+GGG | - | chr1.2:12482678-12482697 | MS.gene021394:intron | 20.0% |
!!! | TTTTTTCTTATATTTGAGAC+CGG | - | chr1.2:12480671-12480690 | MS.gene021394:intron | 20.0% |
! | AAGATTTCGGATGAAAAAAA+AGG | + | chr1.2:12482221-12482240 | None:intergenic | 25.0% |
! | AGAATTAAGTGATGAATTCT+AGG | - | chr1.2:12480390-12480409 | MS.gene021394:intron | 25.0% |
! | ATAATGCAAATAATAGGTGT+TGG | - | chr1.2:12481664-12481683 | MS.gene021394:intron | 25.0% |
! | ATGTTAGAAAGTTATTAGCT+AGG | + | chr1.2:12479770-12479789 | None:intergenic | 25.0% |
! | CAATCCAATATAAGATAGAA+CGG | + | chr1.2:12480047-12480066 | None:intergenic | 25.0% |
! | CGGTTATTAAAATATGTTAG+TGG | + | chr1.2:12481523-12481542 | None:intergenic | 25.0% |
! | GAATAGAATATTCGTAACAT+TGG | + | chr1.2:12480959-12480978 | None:intergenic | 25.0% |
! | GACTATTGTAGAGAATTTAA+AGG | + | chr1.2:12481034-12481053 | None:intergenic | 25.0% |
! | GGTTGAGTTTATTTGTAATT+AGG | + | chr1.2:12481218-12481237 | None:intergenic | 25.0% |
! | GTTAATTTAACGGTAAAAGT+TGG | + | chr1.2:12479824-12479843 | None:intergenic | 25.0% |
! | GTTTGTGTTAATATGAGTTA+GGG | + | chr1.2:12482714-12482733 | None:intergenic | 25.0% |
! | TACTAATAACCTATGAAGTA+CGG | - | chr1.2:12479598-12479617 | MS.gene021394:CDS | 25.0% |
! | TATTGTAGAGAATTTAAAGG+AGG | + | chr1.2:12481031-12481050 | None:intergenic | 25.0% |
! | TTATTTGCATTATGTGGAAA+AGG | + | chr1.2:12481657-12481676 | None:intergenic | 25.0% |
! | TTCCACATAATGCAAATAAT+AGG | - | chr1.2:12481658-12481677 | MS.gene021394:intron | 25.0% |
! | TTTGTGTTAATATGAGTTAG+GGG | + | chr1.2:12482713-12482732 | None:intergenic | 25.0% |
!! | AGGCCTCTAAAAATTTAATT+TGG | + | chr1.2:12482201-12482220 | None:intergenic | 25.0% |
!! | TTGCAACAATATCACATTTT+TGG | + | chr1.2:12482376-12482395 | None:intergenic | 25.0% |
!! | TTGGTCATGAATCTAAATTT+TGG | + | chr1.2:12482100-12482119 | None:intergenic | 25.0% |
!! | TTTTTGTCTTGTGTTATCTA+AGG | + | chr1.2:12482542-12482561 | None:intergenic | 25.0% |
!!! | ATATTTTAATAACCGTGTCA+AGG | - | chr1.2:12481528-12481547 | MS.gene021394:intron | 25.0% |
!!! | GTTTTGAAATATGTAGAATG+TGG | - | chr1.2:12482677-12482696 | MS.gene021394:intron | 25.0% |
!!! | TATCTCAATGACTTTTAGTT+TGG | + | chr1.2:12481415-12481434 | None:intergenic | 25.0% |
!!! | TATTTTAATAACCGTGTCAA+GGG | - | chr1.2:12481529-12481548 | MS.gene021394:intron | 25.0% |
!!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr1.2:12480562-12480581 | None:intergenic | 25.0% |
!!! | TTTAGTGGGATTATTTTTTG+TGG | - | chr1.2:12479906-12479925 | MS.gene021394:intron | 25.0% |
!!! | TTTTTGTTTTTTGCATTGTC+TGG | + | chr1.2:12483020-12483039 | None:intergenic | 25.0% |
AACCATATTATGTCATCCAA+TGG | + | chr1.2:12481172-12481191 | None:intergenic | 30.0% | |
AACGAATCTCCTATATAAAC+CGG | - | chr1.2:12482481-12482500 | MS.gene021394:intron | 30.0% | |
AACTCATATTAACACAAACC+AGG | - | chr1.2:12482715-12482734 | MS.gene021394:intron | 30.0% | |
AATGTCAACTTCAATCACAA+GGG | - | chr1.2:12481749-12481768 | MS.gene021394:intron | 30.0% | |
ACAACAAATCCAACCAAAAT+TGG | + | chr1.2:12483387-12483406 | None:intergenic | 30.0% | |
ACCAATTATACCAAACTCAA+TGG | - | chr1.2:12481562-12481581 | MS.gene021394:intron | 30.0% | |
AGCTTAACTGATTACCAAAA+AGG | + | chr1.2:12482135-12482154 | None:intergenic | 30.0% | |
AGGAAGTGATATTATACCAT+GGG | + | chr1.2:12481198-12481217 | None:intergenic | 30.0% | |
ATACACTTAAAAGTGGAGTA+GGG | - | chr1.2:12483256-12483275 | MS.gene021394:intron | 30.0% | |
ATACTTGGTATCTTTATGCT+TGG | + | chr1.2:12481056-12481075 | None:intergenic | 30.0% | |
ATATAACAAAGATACGATGG+AGG | + | chr1.2:12481841-12481860 | None:intergenic | 30.0% | |
ATATAAGATAGAACGGATGA+CGG | + | chr1.2:12480040-12480059 | None:intergenic | 30.0% | |
ATGGTAATAAGCATCATGAA+AGG | + | chr1.2:12480916-12480935 | None:intergenic | 30.0% | |
CAACAAATCCAACCAAAATT+GGG | + | chr1.2:12483386-12483405 | None:intergenic | 30.0% | |
CAATTTGTGTCTTTCATTGT+TGG | - | chr1.2:12483171-12483190 | MS.gene021394:intron | 30.0% | |
CACCTATTATTTGCATTATG+TGG | + | chr1.2:12481663-12481682 | None:intergenic | 30.0% | |
CCAATTATACCAAACTCAAT+GGG | - | chr1.2:12481563-12481582 | MS.gene021394:intron | 30.0% | |
CTACTCAATGAACCTAAAAA+AGG | - | chr1.2:12480646-12480665 | MS.gene021394:intron | 30.0% | |
GAAATAAATCCGTAAAGATG+TGG | + | chr1.2:12481443-12481462 | None:intergenic | 30.0% | |
GATATTATGCCACATCTTTA+CGG | - | chr1.2:12481431-12481450 | MS.gene021394:intron | 30.0% | |
GATTTATTTCATAGCAACCT+TGG | - | chr1.2:12481453-12481472 | MS.gene021394:intron | 30.0% | |
GGTTTGTGTTAATATGAGTT+AGG | + | chr1.2:12482715-12482734 | None:intergenic | 30.0% | |
TACATAAGGAAATGCTAACA+AGG | + | chr1.2:12480529-12480548 | None:intergenic | 30.0% | |
TAGGAAGTGATATTATACCA+TGG | + | chr1.2:12481199-12481218 | None:intergenic | 30.0% | |
TCAGATCAAAGGTAATTGAA+AGG | + | chr1.2:12481088-12481107 | None:intergenic | 30.0% | |
TCATCCGTTCTATCTTATAT+TGG | - | chr1.2:12480040-12480059 | MS.gene021394:intron | 30.0% | |
TCATGATGAACATAGATTCT+TGG | - | chr1.2:12482578-12482597 | MS.gene021394:intron | 30.0% | |
TCTCTTATTCATCAGATCAA+AGG | + | chr1.2:12481099-12481118 | None:intergenic | 30.0% | |
TGAGGATAAAGACAAAAGAA+GGG | + | chr1.2:12481951-12481970 | None:intergenic | 30.0% | |
TTAGATAAGCTAAGTGAAGA+TGG | - | chr1.2:12479883-12479902 | MS.gene021394:intron | 30.0% | |
TTATTAAATTGTTCCCCCAA+AGG | + | chr1.2:12481719-12481738 | None:intergenic | 30.0% | |
TTGAGGATAAAGACAAAAGA+AGG | + | chr1.2:12481952-12481971 | None:intergenic | 30.0% | |
TTTCAACTTGGTAGATACAT+CGG | + | chr1.2:12481281-12481300 | None:intergenic | 30.0% | |
TTTCTCGAATTCTTTCAACT+TGG | + | chr1.2:12481293-12481312 | None:intergenic | 30.0% | |
! | ATTTTATGTGCTATCACTCT+AGG | + | chr1.2:12481615-12481634 | None:intergenic | 30.0% |
! | CATCGTATCTTTGTTATATG+GGG | - | chr1.2:12481842-12481861 | MS.gene021394:intron | 30.0% |
! | CCATCGTATCTTTGTTATAT+GGG | - | chr1.2:12481841-12481860 | MS.gene021394:intron | 30.0% |
! | GACTTATTGGAGTTTGTTTA+TGG | + | chr1.2:12482835-12482854 | None:intergenic | 30.0% |
! | TCCATCGTATCTTTGTTATA+TGG | - | chr1.2:12481840-12481859 | MS.gene021394:intron | 30.0% |
! | TTTTATGTGCTATCACTCTA+GGG | + | chr1.2:12481614-12481633 | None:intergenic | 30.0% |
!! | TTATGGAGGAGATTATTTTG+AGG | + | chr1.2:12481969-12481988 | None:intergenic | 30.0% |
!!! | AATGACTTTTAGTTTGGTGT+TGG | + | chr1.2:12481409-12481428 | None:intergenic | 30.0% |
!!! | ATATCACATTTTTGGTTGCT+TGG | + | chr1.2:12482368-12482387 | None:intergenic | 30.0% |
!!! | ATGACTTTTAGTTTGGTGTT+GGG | + | chr1.2:12481408-12481427 | None:intergenic | 30.0% |
!!! | ATTTTGGTTGGATTTGTTGT+AGG | - | chr1.2:12483387-12483406 | MS.gene021394:intron | 30.0% |
!!! | TGAGATGGAAGTTTTATTGA+GGG | + | chr1.2:12480829-12480848 | None:intergenic | 30.0% |
!!! | TTGAGATGGAAGTTTTATTG+AGG | + | chr1.2:12480830-12480849 | None:intergenic | 30.0% |
!!! | TTTTGGTTGGATTTGTTGTA+GGG | - | chr1.2:12483388-12483407 | MS.gene021394:intron | 30.0% |
!!! | TTTTTTCATCCGAAATCTTG+AGG | - | chr1.2:12482222-12482241 | MS.gene021394:intron | 30.0% |
AAAAAGGCCTCAATTACTCT+TGG | + | chr1.2:12482119-12482138 | None:intergenic | 35.0% | |
AAAAGATCTTGCTGGATTCA+TGG | + | chr1.2:12483451-12483470 | None:intergenic | 35.0% | |
AAACTCAACCCGTAAAGAAA+TGG | - | chr1.2:12481228-12481247 | MS.gene021394:intron | 35.0% | |
AACACAAGACAAAAACCATG+AGG | - | chr1.2:12482547-12482566 | MS.gene021394:intron | 35.0% | |
AACTAGTACCTACTGCAATA+AGG | - | chr1.2:12481491-12481510 | MS.gene021394:intron | 35.0% | |
AAGGGGAGCTACAAAAAATA+TGG | - | chr1.2:12481767-12481786 | MS.gene021394:intron | 35.0% | |
AAGTTATTAGCTAGGAAGCA+CGG | + | chr1.2:12479762-12479781 | None:intergenic | 35.0% | |
AATAAGATGCCCATTGAGTT+TGG | + | chr1.2:12481575-12481594 | None:intergenic | 35.0% | |
AATGTGTGTTCGGAGATTAT+GGG | + | chr1.2:12482306-12482325 | None:intergenic | 35.0% | |
ACATAATATGGTTATCCCCA+TGG | - | chr1.2:12481179-12481198 | MS.gene021394:intron | 35.0% | |
ACTATGGTTGATCCAAAGAA+AGG | - | chr1.2:12483342-12483361 | MS.gene021394:intron | 35.0% | |
AGTAATCATAGATGTCGTGT+CGG | + | chr1.2:12479665-12479684 | None:intergenic | 35.0% | |
AGTCAATAAGGCAACTCTAT+TGG | + | chr1.2:12481149-12481168 | None:intergenic | 35.0% | |
ATACTCTTTGTGTGAATGAG+GGG | + | chr1.2:12482639-12482658 | None:intergenic | 35.0% | |
ATGTCAACTTCAATCACAAG+GGG | - | chr1.2:12481750-12481769 | MS.gene021394:intron | 35.0% | |
ATTAGAGCTTGGATGCAATT+AGG | + | chr1.2:12479371-12479390 | None:intergenic | 35.0% | |
ATTCTATTCATGCTCAATCC+TGG | - | chr1.2:12480970-12480989 | MS.gene021394:intron | 35.0% | |
ATTTGTTTGCTTTCGTGTCA+TGG | + | chr1.2:12480935-12480954 | None:intergenic | 35.0% | |
CAAAGAAAACTACCCAAGAA+TGG | - | chr1.2:12480718-12480737 | MS.gene021394:intron | 35.0% | |
CAATGTCAACTTCAATCACA+AGG | - | chr1.2:12481748-12481767 | MS.gene021394:intron | 35.0% | |
CATACACTTAAAAGTGGAGT+AGG | - | chr1.2:12483255-12483274 | MS.gene021394:intron | 35.0% | |
CCAGTTCATACACTTAAAAG+TGG | - | chr1.2:12483249-12483268 | MS.gene021394:intron | 35.0% | |
CCCATATAACAAAGATACGA+TGG | + | chr1.2:12481844-12481863 | None:intergenic | 35.0% | |
CCCATTGAGTTTGGTATAAT+TGG | + | chr1.2:12481566-12481585 | None:intergenic | 35.0% | |
CGAATTCAACAATTAGAGCT+TGG | + | chr1.2:12479382-12479401 | None:intergenic | 35.0% | |
CTAAAGCATATGACATCGTT+CGG | + | chr1.2:12481005-12481024 | None:intergenic | 35.0% | |
CTAAGTGAAGATGGTTTAGT+GGG | - | chr1.2:12479892-12479911 | MS.gene021394:intron | 35.0% | |
CTCCATTGGATGACATAATA+TGG | - | chr1.2:12481167-12481186 | MS.gene021394:intron | 35.0% | |
CTTTAAGCCTCTTAATCTGT+TGG | + | chr1.2:12482007-12482026 | None:intergenic | 35.0% | |
GAAAGGTTCTTCTTCATACT+TGG | + | chr1.2:12481071-12481090 | None:intergenic | 35.0% | |
GAGAAGAACTCAAGACTTAT+TGG | + | chr1.2:12482848-12482867 | None:intergenic | 35.0% | |
GATACTCTTTGTGTGAATGA+GGG | + | chr1.2:12482640-12482659 | None:intergenic | 35.0% | |
GCTACAAAAAATATGGTGGT+TGG | - | chr1.2:12481774-12481793 | MS.gene021394:intron | 35.0% | |
GGAAGTGATATTATACCATG+GGG | + | chr1.2:12481197-12481216 | None:intergenic | 35.0% | |
GTCAATAAGGCAACTCTATT+GGG | + | chr1.2:12481148-12481167 | None:intergenic | 35.0% | |
GTTTGAAAAGTCTATGAGGA+TGG | + | chr1.2:12482811-12482830 | None:intergenic | 35.0% | |
TATAGTGCTTCATCTTAAGG+TGG | + | chr1.2:12482907-12482926 | None:intergenic | 35.0% | |
TATCTTCTTCATTACCTCAC+TGG | - | chr1.2:12480096-12480115 | MS.gene021394:intron | 35.0% | |
TATGAAGTACGGATACTTCT+CGG | - | chr1.2:12479609-12479628 | MS.gene021394:CDS | 35.0% | |
TCGTATAGTGCTTCATCTTA+AGG | + | chr1.2:12482910-12482929 | None:intergenic | 35.0% | |
TGATGAACATAGATTCTTGG+AGG | - | chr1.2:12482581-12482600 | MS.gene021394:intron | 35.0% | |
TGGGATGAAGTTAATAGTAG+AGG | + | chr1.2:12479496-12479515 | None:intergenic | 35.0% | |
TGGTGTTTGAAAAGTCTATG+AGG | + | chr1.2:12482815-12482834 | None:intergenic | 35.0% | |
TGTAGAGAATTTAAAGGAGG+TGG | + | chr1.2:12481028-12481047 | None:intergenic | 35.0% | |
TTATTGCAGTAGGTACTAGT+TGG | + | chr1.2:12481492-12481511 | None:intergenic | 35.0% | |
TTCATGACCAAGAGTAATTG+AGG | - | chr1.2:12482109-12482128 | MS.gene021394:intron | 35.0% | |
TTCGGAGATTATGGGTAATA+TGG | + | chr1.2:12482298-12482317 | None:intergenic | 35.0% | |
TTGAAGTTGACATTGTTCTC+AGG | + | chr1.2:12481743-12481762 | None:intergenic | 35.0% | |
! | AAAAAATATGGTGGTTGGCT+TGG | - | chr1.2:12481779-12481798 | MS.gene021394:intron | 35.0% |
! | AAGAGTAATTGAGGCCTTTT+TGG | - | chr1.2:12482118-12482137 | MS.gene021394:intron | 35.0% |
! | AAGTTGGTTGAATGTGTGTT+CGG | + | chr1.2:12482316-12482335 | None:intergenic | 35.0% |
! | ATCATGAAGAGTATACCTCA+TGG | + | chr1.2:12482565-12482584 | None:intergenic | 35.0% |
! | ATGAATCCAGCAAGATCTTT+TGG | - | chr1.2:12483450-12483469 | MS.gene021394:intron | 35.0% |
! | GGTTGTTCCTAAAGAGATTT+TGG | + | chr1.2:12479333-12479352 | None:intergenic | 35.0% |
! | GTTCCTTTCAGACATTTTTG+AGG | + | chr1.2:12480891-12480910 | None:intergenic | 35.0% |
! | TATTTTCGTAAGGTTGCAGA+TGG | + | chr1.2:12481912-12481931 | None:intergenic | 35.0% |
! | TCTAGGGTTAACTTATGGAT+AGG | + | chr1.2:12481598-12481617 | None:intergenic | 35.0% |
! | TTCTTATATTTGAGACCGGA+GGG | - | chr1.2:12480675-12480694 | MS.gene021394:intron | 35.0% |
! | TTCTTATATTTGAGACCGGA+GGG | + | chr1.2:12480694-12480675 | None:intergenic | 35.0% |
! | TTTCTTATATTTGAGACCGG+AGG | - | chr1.2:12480674-12480693 | MS.gene021394:intron | 35.0% |
! | TTTCTTATATTTGAGACCGG+AGG | + | chr1.2:12480693-12480674 | None:intergenic | 35.0% |
!! | ATCACTCTAGGGTTAACTTA+TGG | + | chr1.2:12481603-12481622 | None:intergenic | 35.0% |
!! | CCACTTTTAAGTGTATGAAC+TGG | + | chr1.2:12483252-12483271 | None:intergenic | 35.0% |
!! | TTTGGTTGGATTTGTTGTAG+GGG | - | chr1.2:12483389-12483408 | MS.gene021394:intron | 35.0% |
!!! | AGGTTTTAAAGCCTCAAACT+AGG | + | chr1.2:12482429-12482448 | None:intergenic | 35.0% |
!!! | ATGTGGAAAAGGTTTTGTTC+TGG | + | chr1.2:12481646-12481665 | None:intergenic | 35.0% |
!!! | GAGATGGAAGTTTTATTGAG+GGG | + | chr1.2:12480828-12480847 | None:intergenic | 35.0% |
!!! | GGGATTATTTTTTGTGGCTA+TGG | - | chr1.2:12479912-12479931 | MS.gene021394:intron | 35.0% |
!!! | TGACTTTTAGTTTGGTGTTG+GGG | + | chr1.2:12481407-12481426 | None:intergenic | 35.0% |
!!! | TTTTTGGTTGCTTGGCTAAA+TGG | + | chr1.2:12482360-12482379 | None:intergenic | 35.0% |
AAAACCTGTAATGTTCGACG+AGG | - | chr1.2:12482442-12482461 | MS.gene021394:intron | 40.0% | |
AACATCTTTACTCCCTTCTG+TGG | - | chr1.2:12482932-12482951 | MS.gene021394:CDS | 40.0% | |
ACCAGCAAAGACAAAGAGAA+AGG | + | chr1.2:12479411-12479430 | None:intergenic | 40.0% | |
ACCTTTCTCTTTGTCTTTGC+TGG | - | chr1.2:12479407-12479426 | MS.gene021394:CDS | 40.0% | |
ACGGACACAAATATGGATAC+TGG | + | chr1.2:12479743-12479762 | None:intergenic | 40.0% | |
AGGACATCATGTGGTAGAAA+TGG | + | chr1.2:12481699-12481718 | None:intergenic | 40.0% | |
AGTAGCTTTCTTCATCCACA+AGG | + | chr1.2:12483599-12483618 | None:intergenic | 40.0% | |
ATGCCCATCCATTTCTTTAC+GGG | + | chr1.2:12481239-12481258 | None:intergenic | 40.0% | |
ATGGGTAATATGGTGTGAGT+AGG | + | chr1.2:12482288-12482307 | None:intergenic | 40.0% | |
ATGGTTGATCCAAAGAAAGG+AGG | - | chr1.2:12483345-12483364 | MS.gene021394:intron | 40.0% | |
CAACCCGTAAAGAAATGGAT+GGG | - | chr1.2:12481233-12481252 | MS.gene021394:intron | 40.0% | |
CAATTTCCACTAACCAATGC+AGG | + | chr1.2:12483477-12483496 | None:intergenic | 40.0% | |
CATGTGGTAGAAATGGTTTG+CGG | + | chr1.2:12481692-12481711 | None:intergenic | 40.0% | |
CCTTATGTAAATACTCCCTC+CGG | - | chr1.2:12480540-12480559 | MS.gene021394:intron | 40.0% | |
CGATACTCTTTGTGTGAATG+AGG | + | chr1.2:12482641-12482660 | None:intergenic | 40.0% | |
CTCAAACTAGGCAGAATTAC+AGG | + | chr1.2:12482417-12482436 | None:intergenic | 40.0% | |
CTGTAATTCTGCCTAGTTTG+AGG | - | chr1.2:12482415-12482434 | MS.gene021394:intron | 40.0% | |
CTTAGCATGCACATGATAAG+AGG | - | chr1.2:12482504-12482523 | MS.gene021394:intron | 40.0% | |
GAACACACATTCAACCAACT+TGG | - | chr1.2:12482315-12482334 | MS.gene021394:intron | 40.0% | |
GAATGTGTGTTCGGAGATTA+TGG | + | chr1.2:12482307-12482326 | None:intergenic | 40.0% | |
GAGCTTCATCTTCCATTCTT+GGG | + | chr1.2:12480733-12480752 | None:intergenic | 40.0% | |
GATCAACATATAGCATCTGC+AGG | - | chr1.2:12480066-12480085 | MS.gene021394:intron | 40.0% | |
GATGCCCATCCATTTCTTTA+CGG | + | chr1.2:12481240-12481259 | None:intergenic | 40.0% | |
GCTAAGTGAAGATGGTTTAG+TGG | - | chr1.2:12479891-12479910 | MS.gene021394:intron | 40.0% | |
GGGAGCTACAAAAAATATGG+TGG | - | chr1.2:12481770-12481789 | MS.gene021394:intron | 40.0% | |
GTCATCCAATGGAGTCAATA+AGG | + | chr1.2:12481161-12481180 | None:intergenic | 40.0% | |
GTGTACTCAAGGAGTAGTTT+GGG | - | chr1.2:12483278-12483297 | MS.gene021394:intron | 40.0% | |
GTTATAAGCAATACTCCCTC+CGG | + | chr1.2:12480693-12480712 | None:intergenic | 40.0% | |
GTTCACTGTGTATGCAACTA+TGG | - | chr1.2:12483326-12483345 | MS.gene021394:intron | 40.0% | |
TAACACAAACCAGGTCATCA+AGG | - | chr1.2:12482724-12482743 | MS.gene021394:intron | 40.0% | |
TACGGATACTTCTCGGATTA+GGG | - | chr1.2:12479616-12479635 | MS.gene021394:CDS | 40.0% | |
TATGGATACTGGACAAGACA+CGG | + | chr1.2:12479732-12479751 | None:intergenic | 40.0% | |
TCAACCCGTAAAGAAATGGA+TGG | - | chr1.2:12481232-12481251 | MS.gene021394:intron | 40.0% | |
TCGCCTCAAAAATGTCTGAA+AGG | - | chr1.2:12480885-12480904 | MS.gene021394:intron | 40.0% | |
TCTACCACATGATGTCCTTT+GGG | - | chr1.2:12481701-12481720 | MS.gene021394:intron | 40.0% | |
TGAGCTTCATCTTCCATTCT+TGG | + | chr1.2:12480734-12480753 | None:intergenic | 40.0% | |
TGGAAATTGGACTGACCAAT+GGG | - | chr1.2:12483488-12483507 | MS.gene021394:intron | 40.0% | |
TGGGTAATATGGTGTGAGTA+GGG | + | chr1.2:12482287-12482306 | None:intergenic | 40.0% | |
TTATCATGTGCATGCTAAGC+CGG | + | chr1.2:12482503-12482522 | None:intergenic | 40.0% | |
TTCTACCACATGATGTCCTT+TGG | - | chr1.2:12481700-12481719 | MS.gene021394:intron | 40.0% | |
! | AAGATCTTTTGGACCTGCAT+TGG | - | chr1.2:12483461-12483480 | MS.gene021394:intron | 40.0% |
! | ATGTGGTAGAAATGGTTTGC+GGG | + | chr1.2:12481691-12481710 | None:intergenic | 40.0% |
! | CAAAGATACGATGGAGGTTT+TGG | + | chr1.2:12481835-12481854 | None:intergenic | 40.0% |
! | CATGCTAAGCCGGTTTATAT+AGG | + | chr1.2:12482493-12482512 | None:intergenic | 40.0% |
! | GTATCGAGGTCTTTTCTAGA+TGG | - | chr1.2:12482655-12482674 | MS.gene021394:intron | 40.0% |
! | TTTTGGATGCAAGACCGTTA+GGG | + | chr1.2:12482612-12482631 | None:intergenic | 40.0% |
!! | AATTAGGTTGAGTAGCCTCT+TGG | + | chr1.2:12479355-12479374 | None:intergenic | 40.0% |
!! | AGTTGCCTTATTGACTCCAT+TGG | - | chr1.2:12481153-12481172 | MS.gene021394:intron | 40.0% |
!! | ATTAGGTTGAGTAGCCTCTT+GGG | + | chr1.2:12479354-12479373 | None:intergenic | 40.0% |
!! | CATTCACACAAAGAGTATCG+AGG | - | chr1.2:12482641-12482660 | MS.gene021394:intron | 40.0% |
!! | CTGCATTGGTTAGTGGAAAT+TGG | - | chr1.2:12483475-12483494 | MS.gene021394:intron | 40.0% |
!! | GAGAAGTATCCGTACTTCAT+AGG | + | chr1.2:12479610-12479629 | None:intergenic | 40.0% |
!! | TGCTGGTGTTGGTTCAAAAA+TGG | - | chr1.2:12479424-12479443 | MS.gene021394:CDS | 40.0% |
!!! | ACATTTTTGAGGCGAACGTT+AGG | + | chr1.2:12480880-12480899 | None:intergenic | 40.0% |
!!! | ACCAATGGGTTTTTTGGGTT+GGG | - | chr1.2:12483502-12483521 | MS.gene021394:CDS | 40.0% |
!!! | ATTTTTGAGGCGAACGTTAG+GGG | + | chr1.2:12480878-12480897 | None:intergenic | 40.0% |
!!! | CATTTTTGAGGCGAACGTTA+GGG | + | chr1.2:12480879-12480898 | None:intergenic | 40.0% |
!!! | GACTGACCAATGGGTTTTTT+GGG | - | chr1.2:12483497-12483516 | MS.gene021394:CDS | 40.0% |
!!! | GGAAGTTTTATTGAGGGGTT+GGG | + | chr1.2:12480823-12480842 | None:intergenic | 40.0% |
!!! | GGTTTTAGGCCTCAAGATTT+CGG | + | chr1.2:12482234-12482253 | None:intergenic | 40.0% |
!!! | TGGAAGTTTTATTGAGGGGT+TGG | + | chr1.2:12480824-12480843 | None:intergenic | 40.0% |
AAAGGAGGACTTTCTGGACT+TGG | - | chr1.2:12483360-12483379 | MS.gene021394:intron | 45.0% | |
AACTCATGTTCCTCTCCTTG+TGG | - | chr1.2:12483581-12483600 | MS.gene021394:CDS | 45.0% | |
AATCTCCTCCATAACTCACC+AGG | - | chr1.2:12481975-12481994 | MS.gene021394:intron | 45.0% | |
AATGTTCGACGAGGAAGCAA+TGG | - | chr1.2:12482451-12482470 | MS.gene021394:intron | 45.0% | |
ACACTTCGCAATGACTGTGA+AGG | + | chr1.2:12481889-12481908 | None:intergenic | 45.0% | |
ACGTTAGGGGTGAAATTGCT+CGG | + | chr1.2:12480865-12480884 | None:intergenic | 45.0% | |
AGCCTCTTAATCTGTTGGAC+CGG | + | chr1.2:12482002-12482021 | None:intergenic | 45.0% | |
ATCTCCTCCATAACTCACCA+GGG | - | chr1.2:12481976-12481995 | MS.gene021394:intron | 45.0% | |
ATGGTTGAGCAATGGATGTG+TGG | + | chr1.2:12482792-12482811 | None:intergenic | 45.0% | |
ATTCATGCTCAATCCTGGCA+CGG | - | chr1.2:12480975-12480994 | MS.gene021394:intron | 45.0% | |
CACTTACTAATCCACCAGTG+AGG | + | chr1.2:12480113-12480132 | None:intergenic | 45.0% | |
CCAAAGAAAGGAGGACTTTC+TGG | - | chr1.2:12483354-12483373 | MS.gene021394:intron | 45.0% | |
CCAGAAAGTCCTCCTTTCTT+TGG | + | chr1.2:12483357-12483376 | None:intergenic | 45.0% | |
CTACCACATGATGTCCTTTG+GGG | - | chr1.2:12481702-12481721 | MS.gene021394:intron | 45.0% | |
CTATGAGGATGGTTGAGCAA+TGG | + | chr1.2:12482800-12482819 | None:intergenic | 45.0% | |
CTCTTTGTCTTTGCTGGTGT+TGG | - | chr1.2:12479413-12479432 | MS.gene021394:CDS | 45.0% | |
CTTCTTCATTACCTCACTGG+TGG | - | chr1.2:12480099-12480118 | MS.gene021394:intron | 45.0% | |
CTTGGCTAAATGGAGAGTAG+CGG | + | chr1.2:12482350-12482369 | None:intergenic | 45.0% | |
CTTTCTTCATCCACAAGGAG+AGG | + | chr1.2:12483594-12483613 | None:intergenic | 45.0% | |
GAGTGTAACGCAAGAGCAAA+AGG | - | chr1.2:12481117-12481136 | MS.gene021394:intron | 45.0% | |
GGTGTACTCAAGGAGTAGTT+TGG | - | chr1.2:12483277-12483296 | MS.gene021394:intron | 45.0% | |
GTACGGATACTTCTCGGATT+AGG | - | chr1.2:12479615-12479634 | MS.gene021394:CDS | 45.0% | |
GTGGAAATTGGACTGACCAA+TGG | - | chr1.2:12483487-12483506 | MS.gene021394:intron | 45.0% | |
TAATATGGTGTGAGTAGGGC+CGG | + | chr1.2:12482283-12482302 | None:intergenic | 45.0% | |
TACCACATGATGTCCTTTGG+GGG | - | chr1.2:12481703-12481722 | MS.gene021394:intron | 45.0% | |
TATGGCACAAACTCTTCTGG+TGG | - | chr1.2:12479930-12479949 | MS.gene021394:intron | 45.0% | |
TCTTGGAGGACATTCCCTAA+CGG | - | chr1.2:12482595-12482614 | MS.gene021394:intron | 45.0% | |
TGTTGTAGGGGCTAACATCT+TGG | - | chr1.2:12483401-12483420 | MS.gene021394:intron | 45.0% | |
TTGAGCAATGGATGTGTGGA+AGG | + | chr1.2:12482788-12482807 | None:intergenic | 45.0% | |
TTGAGCTAGTGACATGGAGA+TGG | + | chr1.2:12481340-12481359 | None:intergenic | 45.0% | |
TTGCAGTAGGTACTAGTTGG+AGG | + | chr1.2:12481489-12481508 | None:intergenic | 45.0% | |
TTGGCTAAATGGAGAGTAGC+GGG | + | chr1.2:12482349-12482368 | None:intergenic | 45.0% | |
! | ACGGATACTTCTCGGATTAG+GGG | - | chr1.2:12479617-12479636 | MS.gene021394:CDS | 45.0% |
! | AGATTTTCAGTGTCCGTTCC+GGG | + | chr1.2:12482978-12482997 | None:intergenic | 45.0% |
! | AGGAAGCACGGACACAAATA+TGG | + | chr1.2:12479750-12479769 | None:intergenic | 45.0% |
! | ATGGTGTTGAGCTAGTGACA+TGG | + | chr1.2:12481346-12481365 | None:intergenic | 45.0% |
! | CTCTTTAGGAACAACCCAAG+AGG | - | chr1.2:12479337-12479356 | MS.gene021394:CDS | 45.0% |
! | GAGATTTTCAGTGTCCGTTC+CGG | + | chr1.2:12482979-12482998 | None:intergenic | 45.0% |
! | GTTGGTTCAAAAATGGCTGC+TGG | - | chr1.2:12479431-12479450 | MS.gene021394:CDS | 45.0% |
! | TAGCTTTTGCACCCTTGACA+CGG | + | chr1.2:12481543-12481562 | None:intergenic | 45.0% |
! | TTCTGGACTTGGCCCAATTT+TGG | - | chr1.2:12483371-12483390 | MS.gene021394:intron | 45.0% |
!! | AAATATGGTGGTTGGCTTGG+AGG | - | chr1.2:12481782-12481801 | MS.gene021394:intron | 45.0% |
!! | AATATGGTGGTTGGCTTGGA+GGG | - | chr1.2:12481783-12481802 | MS.gene021394:intron | 45.0% |
!! | AGATACGATGGAGGTTTTGG+AGG | + | chr1.2:12481832-12481851 | None:intergenic | 45.0% |
!! | CAATGACTGTGAAGGTGTTG+GGG | + | chr1.2:12481881-12481900 | None:intergenic | 45.0% |
!! | CCGGAGGGAGTATTTACATA+AGG | + | chr1.2:12480543-12480562 | None:intergenic | 45.0% |
!! | GCAATGACTGTGAAGGTGTT+GGG | + | chr1.2:12481882-12481901 | None:intergenic | 45.0% |
!! | GTTTTGGATGCAAGACCGTT+AGG | + | chr1.2:12482613-12482632 | None:intergenic | 45.0% |
!! | TAGTTTGGTGTTGGGGTTTC+AGG | + | chr1.2:12481400-12481419 | None:intergenic | 45.0% |
!! | TTTGGACCTGCATTGGTTAG+TGG | - | chr1.2:12483468-12483487 | MS.gene021394:intron | 45.0% |
!!! | GACCAATGGGTTTTTTGGGT+TGG | - | chr1.2:12483501-12483520 | MS.gene021394:CDS | 45.0% |
!!! | GGACTGACCAATGGGTTTTT+TGG | - | chr1.2:12483496-12483515 | MS.gene021394:CDS | 45.0% |
!! | AATAAAATTATATTGAAAAT+TGG | + | chr1.2:12479550-12479569 | None:intergenic | 5.0% |
!!! | TTTCAATATAATTTTATTAA+AGG | - | chr1.2:12479552-12479571 | MS.gene021394:CDS | 5.0% |
AGTGGAGTAGGGTGTACTCA+AGG | - | chr1.2:12483267-12483286 | MS.gene021394:intron | 50.0% | |
CACAAACCAGGTCATCAAGG+TGG | - | chr1.2:12482727-12482746 | MS.gene021394:intron | 50.0% | |
GAGGCCTAAAACCCTTGCTT+GGG | - | chr1.2:12482241-12482260 | MS.gene021394:intron | 50.0% | |
GCAGGTCCAAAAGATCTTGC+TGG | + | chr1.2:12483459-12483478 | None:intergenic | 50.0% | |
GCCCAACCCAAAAAACCCAT+TGG | + | chr1.2:12483506-12483525 | None:intergenic | 50.0% | |
GCTTCCTCGTCGAACATTAC+AGG | + | chr1.2:12482449-12482468 | None:intergenic | 50.0% | |
GGAGGGGTTGTTAGTTGAGA+TGG | + | chr1.2:12480844-12480863 | None:intergenic | 50.0% | |
GGCTATGGCACAAACTCTTC+TGG | - | chr1.2:12479927-12479946 | MS.gene021394:intron | 50.0% | |
GTGACCGGCGGATATCATTA+CGG | + | chr1.2:12479956-12479975 | None:intergenic | 50.0% | |
GTGGTGACATGCACAACTCA+TGG | - | chr1.2:12482746-12482765 | MS.gene021394:intron | 50.0% | |
GTTGCCTAGATGCCACAGAA+GGG | + | chr1.2:12482947-12482966 | None:intergenic | 50.0% | |
TACTCCCTTCTGTGGCATCT+AGG | - | chr1.2:12482940-12482959 | MS.gene021394:CDS | 50.0% | |
TAGGGGTGAAATTGCTCGGA+GGG | + | chr1.2:12480861-12480880 | None:intergenic | 50.0% | |
TCTTTGTGTGAATGAGGGGC+TGG | + | chr1.2:12482635-12482654 | None:intergenic | 50.0% | |
TGAGGCCTAAAACCCTTGCT+TGG | - | chr1.2:12482240-12482259 | MS.gene021394:intron | 50.0% | |
TGTTGCCTAGATGCCACAGA+AGG | + | chr1.2:12482948-12482967 | None:intergenic | 50.0% | |
TTAGGGGTGAAATTGCTCGG+AGG | + | chr1.2:12480862-12480881 | None:intergenic | 50.0% | |
TTCCCCCAAAGGACATCATG+TGG | + | chr1.2:12481708-12481727 | None:intergenic | 50.0% | |
TTGGAGGGAGGTGACATGTA+CGG | - | chr1.2:12481798-12481817 | MS.gene021394:intron | 50.0% | |
! | AAACCCTTGCTTGGGTTGCT+TGG | - | chr1.2:12482249-12482268 | MS.gene021394:intron | 50.0% |
! | ATGTCACCACCTTGATGACC+TGG | + | chr1.2:12482736-12482755 | None:intergenic | 50.0% |
! | ATTTTCAGTGTCCGTTCCGG+GGG | + | chr1.2:12482976-12482995 | None:intergenic | 50.0% |
! | CATAGATGTCGTGTCGGTGT+TGG | + | chr1.2:12479659-12479678 | None:intergenic | 50.0% |
! | CGCAATGACTGTGAAGGTGT+TGG | + | chr1.2:12481883-12481902 | None:intergenic | 50.0% |
! | GATTTTCAGTGTCCGTTCCG+GGG | + | chr1.2:12482977-12482996 | None:intergenic | 50.0% |
! | GCAACCCAAGCAAGGGTTTT+AGG | + | chr1.2:12482248-12482267 | None:intergenic | 50.0% |
! | GGAATGCGCCTTATTGCAGT+AGG | + | chr1.2:12481502-12481521 | None:intergenic | 50.0% |
! | TAGAACGGATGACGGTGATG+TGG | + | chr1.2:12480032-12480051 | None:intergenic | 50.0% |
!! | GGACTTGGCCCAATTTTGGT+TGG | - | chr1.2:12483375-12483394 | MS.gene021394:intron | 50.0% |
!! | TTCTCGGATTAGGGGTGTTC+TGG | - | chr1.2:12479625-12479644 | MS.gene021394:CDS | 50.0% |
!! | TTTGGTGTTGGGGTTTCAGG+TGG | + | chr1.2:12481397-12481416 | None:intergenic | 50.0% |
!!! | TGTGAATGAGGGGCTGGTTT+TGG | + | chr1.2:12482629-12482648 | None:intergenic | 50.0% |
!!! | TTTTGGGTTGGGCCTCTCAT+TGG | - | chr1.2:12483513-12483532 | MS.gene021394:CDS | 50.0% |
AACAAGGAGGCCCAAGGTCA+CGG | + | chr1.2:12480004-12480023 | None:intergenic | 55.0% | |
AGGGGTGAAATTGCTCGGAG+GGG | + | chr1.2:12480860-12480879 | None:intergenic | 55.0% | |
AGGTCACGGCGGGATTCAAA+TGG | + | chr1.2:12479990-12480009 | None:intergenic | 55.0% | |
ATATCCGCCGGTCACGTTTC+CGG | - | chr1.2:12479961-12479980 | MS.gene021394:intron | 55.0% | |
GGCCGGTCCAACAGATTAAG+AGG | - | chr1.2:12481997-12482016 | MS.gene021394:intron | 55.0% | |
GTAGGGGCTAACATCTTGGC+TGG | - | chr1.2:12483405-12483424 | MS.gene021394:intron | 55.0% | |
GTGGCCGTAATGATATCCGC+CGG | - | chr1.2:12479949-12479968 | MS.gene021394:intron | 55.0% | |
TACATCGGCACTAGTGTGCG+AGG | + | chr1.2:12481266-12481285 | None:intergenic | 55.0% | |
TCTAGGCAACAGTGAACCCC+CGG | - | chr1.2:12482957-12482976 | MS.gene021394:CDS | 55.0% | |
TGGAGGGAGGTGACATGTAC+GGG | - | chr1.2:12481799-12481818 | MS.gene021394:intron | 55.0% | |
TTAATCTGTTGGACCGGCCC+TGG | + | chr1.2:12481996-12482015 | None:intergenic | 55.0% | |
TTGAATCCCGCCGTGACCTT+GGG | - | chr1.2:12479991-12480010 | MS.gene021394:intron | 55.0% | |
TTTGAATCCCGCCGTGACCT+TGG | - | chr1.2:12479990-12480009 | MS.gene021394:intron | 55.0% | |
! | GCTAAATGGAGAGTAGCGGG+TGG | + | chr1.2:12482346-12482365 | None:intergenic | 55.0% |
! | GGTGTTGGGGTCATCTAGAG+TGG | + | chr1.2:12481868-12481887 | None:intergenic | 55.0% |
! | TTGGGCCTCTCATTGGTGGT+GGG | - | chr1.2:12483520-12483539 | MS.gene021394:CDS | 55.0% |
!! | AGGTACTAGTTGGAGGCGTC+TGG | + | chr1.2:12481482-12481501 | None:intergenic | 55.0% |
!! | TGTCGTGTCGGTGTTGGTGT+CGG | + | chr1.2:12479653-12479672 | None:intergenic | 55.0% |
!! | TTGGAGGCGTCTGGTATCCA+AGG | + | chr1.2:12481473-12481492 | None:intergenic | 55.0% |
ACCTTGGGCCTCCTTGTTGG+CGG | - | chr1.2:12480006-12480025 | MS.gene021394:intron | 60.0% | |
AGGGCCAAGCAACCCAAGCA+AGG | + | chr1.2:12482256-12482275 | None:intergenic | 60.0% | |
ATCGTTCGGATGTCCGTGCC+AGG | + | chr1.2:12480991-12481010 | None:intergenic | 60.0% | |
ATGGCCACCGGAAACGTGAC+CGG | + | chr1.2:12479971-12479990 | None:intergenic | 60.0% | |
CCTCCATAACTCACCAGGGC+CGG | - | chr1.2:12481980-12481999 | MS.gene021394:intron | 60.0% | |
GCAACAGTGAACCCCCGGAA+CGG | - | chr1.2:12482962-12482981 | MS.gene021394:CDS | 60.0% | |
GCAAGCCCACCACCAATGAG+AGG | + | chr1.2:12483528-12483547 | None:intergenic | 60.0% | |
GGCGGGATTCAAATGGCCAC+CGG | + | chr1.2:12479983-12480002 | None:intergenic | 60.0% | |
GGCTAACATCTTGGCTGGCG+GGG | - | chr1.2:12483410-12483429 | MS.gene021394:intron | 60.0% | |
GGGCCAAGCAACCCAAGCAA+GGG | + | chr1.2:12482255-12482274 | None:intergenic | 60.0% | |
GGGCTAACATCTTGGCTGGC+GGG | - | chr1.2:12483409-12483428 | MS.gene021394:intron | 60.0% | |
GGGGCTAACATCTTGGCTGG+CGG | - | chr1.2:12483408-12483427 | MS.gene021394:intron | 60.0% | |
GTGACCTTGGGCCTCCTTGT+TGG | - | chr1.2:12480003-12480022 | MS.gene021394:intron | 60.0% | |
GTTGGGCCTCTCATTGGTGG+TGG | - | chr1.2:12483519-12483538 | MS.gene021394:CDS | 60.0% | |
TGATGTGGCCGCCAACAAGG+AGG | + | chr1.2:12480017-12480036 | None:intergenic | 60.0% | |
TGTGAGTAGGGCCGGCCTAA+GGG | + | chr1.2:12482275-12482294 | None:intergenic | 60.0% | |
! | AGCGGGTGGTCTTGCCAAGT+TGG | + | chr1.2:12482332-12482351 | None:intergenic | 60.0% |
! | GCTTGGGTTGCTTGGCCCTT+AGG | - | chr1.2:12482257-12482276 | MS.gene021394:intron | 60.0% |
! | TGGGTTGGGCCTCTCATTGG+TGG | - | chr1.2:12483516-12483535 | MS.gene021394:CDS | 60.0% |
!! | ATGGTGGTTGGCTTGGAGGG+AGG | - | chr1.2:12481786-12481805 | MS.gene021394:intron | 60.0% |
!! | CTCATTGGTGGTGGGCTTGC+TGG | - | chr1.2:12483528-12483547 | MS.gene021394:CDS | 60.0% |
AAGGAGGCCCAAGGTCACGG+CGG | + | chr1.2:12480001-12480020 | None:intergenic | 65.0% | |
CCGGCCCTGGTGAGTTATGG+AGG | + | chr1.2:12481983-12482002 | None:intergenic | 65.0% | |
CGGTGATGTGGCCGCCAACA+AGG | + | chr1.2:12480020-12480039 | None:intergenic | 65.0% | |
GGACCGGCCCTGGTGAGTTA+TGG | + | chr1.2:12481986-12482005 | None:intergenic | 65.0% | |
GGGTTGCTTGGCCCTTAGGC+CGG | - | chr1.2:12482261-12482280 | MS.gene021394:intron | 65.0% | |
GTGTGAGTAGGGCCGGCCTA+AGG | + | chr1.2:12482276-12482295 | None:intergenic | 65.0% | |
AGGAGGCCCAAGGTCACGGC+GGG | + | chr1.2:12480000-12480019 | None:intergenic | 70.0% | |
GCCACCGGAAACGTGACCGG+CGG | + | chr1.2:12479968-12479987 | None:intergenic | 70.0% | |
GCCGCCAACAAGGAGGCCCA+AGG | + | chr1.2:12480010-12480029 | None:intergenic | 70.0% | |
TCCGCCGGTCACGTTTCCGG+TGG | - | chr1.2:12479964-12479983 | MS.gene021394:intron | 70.0% | |
TTGGCTGGCGGGGCTTTCGC+AGG | - | chr1.2:12483420-12483439 | MS.gene021394:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 12479326 | 12483620 | 12479326 | ID=MS.gene021394 |
chr1.2 | mRNA | 12479326 | 12483620 | 12479326 | ID=MS.gene021394.t1;Parent=MS.gene021394 |
chr1.2 | exon | 12483494 | 12483620 | 12483494 | ID=MS.gene021394.t1.exon1;Parent=MS.gene021394.t1 |
chr1.2 | CDS | 12483494 | 12483620 | 12483494 | ID=cds.MS.gene021394.t1;Parent=MS.gene021394.t1 |
chr1.2 | exon | 12482821 | 12483059 | 12482821 | ID=MS.gene021394.t1.exon2;Parent=MS.gene021394.t1 |
chr1.2 | CDS | 12482821 | 12483059 | 12482821 | ID=cds.MS.gene021394.t1;Parent=MS.gene021394.t1 |
chr1.2 | exon | 12479326 | 12479703 | 12479326 | ID=MS.gene021394.t1.exon3;Parent=MS.gene021394.t1 |
chr1.2 | CDS | 12479326 | 12479703 | 12479326 | ID=cds.MS.gene021394.t1;Parent=MS.gene021394.t1 |
Gene Sequence |
Protein sequence |