Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32446.t1 | TKY74560.1 | 79.7 | 246 | 50 | 0 | 1 | 246 | 1 | 246 | 2.20E-106 | 395.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32446.t1 | O82316 | 67.3 | 245 | 80 | 0 | 1 | 245 | 1 | 245 | 1.4e-88 | 327.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32446.t1 | A0A371FKI7 | 78.5 | 246 | 53 | 0 | 1 | 246 | 1 | 246 | 3.6e-106 | 394.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene32446 | 0.84216 | 3.06E-58 | -1.69E-46 |
| MS.gene049611 | MS.gene32446 | 0.809564 | 1.78E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene32446 | 0.803785 | 2.95E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene32446 | -0.800925 | 1.15E-48 | -1.69E-46 |
| MS.gene050504 | MS.gene32446 | -0.801608 | 8.31E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene32446 | 0.805513 | 1.29E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene32446 | 0.810416 | 1.17E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene32446 | 0.810994 | 8.74E-51 | -1.69E-46 |
| MS.gene051138 | MS.gene32446 | 0.801062 | 1.07E-48 | -1.69E-46 |
| MS.gene051364 | MS.gene32446 | 0.802063 | 6.70E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene32446 | 0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene051422 | MS.gene32446 | 0.817989 | 2.48E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene32446 | 0.802655 | 5.06E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene32446 | 0.813602 | 2.36E-51 | -1.69E-46 |
| MS.gene05244 | MS.gene32446 | 0.801957 | 7.05E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene32446 | 0.824695 | 7.02E-54 | -1.69E-46 |
| MS.gene053887 | MS.gene32446 | 0.803677 | 3.11E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene32446 | 0.811873 | 5.63E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene32446 | -0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene05483 | MS.gene32446 | 0.806529 | 7.87E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene32446 | 0.817069 | 3.99E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene32446 | -0.804684 | 1.92E-49 | -1.69E-46 |
| MS.gene056224 | MS.gene32446 | 0.811624 | 6.38E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene32446 | 0.812266 | 4.62E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene32446 | 0.809308 | 2.02E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene32446 | 0.815716 | 8.02E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene32446 | 0.813624 | 2.33E-51 | -1.69E-46 |
| MS.gene058067 | MS.gene32446 | 0.801062 | 1.08E-48 | -1.69E-46 |
| MS.gene058068 | MS.gene32446 | 0.804506 | 2.09E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene32446 | 0.828337 | 9.51E-55 | -1.69E-46 |
| MS.gene058268 | MS.gene32446 | 0.811847 | 5.70E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene32446 | 0.803716 | 3.05E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene32446 | 0.825536 | 4.44E-54 | -1.69E-46 |
| MS.gene058838 | MS.gene32446 | -0.805197 | 1.50E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene32446 | -0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene059070 | MS.gene32446 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene32446 | -0.80179 | 7.62E-49 | -1.69E-46 |
| MS.gene059953 | MS.gene32446 | 0.807053 | 6.10E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene32446 | 0.831166 | 1.95E-55 | -1.69E-46 |
| MS.gene060405 | MS.gene32446 | 0.815905 | 7.27E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene32446 | -0.808886 | 2.48E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32446.t1 | MTR_1g006590 | 93.117 | 247 | 17 | 0 | 1 | 247 | 1 | 247 | 1.22e-167 | 462 |
| MS.gene32446.t1 | MTR_1g006490 | 86.235 | 247 | 34 | 0 | 1 | 247 | 1 | 247 | 7.23e-156 | 433 |
| MS.gene32446.t1 | MTR_8g013680 | 53.629 | 248 | 109 | 3 | 1 | 243 | 1 | 247 | 2.62e-85 | 254 |
| MS.gene32446.t1 | MTR_2g101370 | 52.459 | 244 | 112 | 2 | 4 | 243 | 5 | 248 | 8.22e-84 | 250 |
| MS.gene32446.t1 | MTR_4g063090 | 51.250 | 240 | 113 | 2 | 1 | 236 | 3 | 242 | 2.19e-77 | 234 |
| MS.gene32446.t1 | MTR_1g115405 | 48.971 | 243 | 119 | 3 | 3 | 240 | 5 | 247 | 8.05e-76 | 230 |
| MS.gene32446.t1 | MTR_7g103030 | 52.459 | 244 | 111 | 3 | 1 | 240 | 3 | 245 | 4.92e-75 | 228 |
| MS.gene32446.t1 | MTR_5g012810 | 49.799 | 249 | 117 | 4 | 1 | 244 | 1 | 246 | 6.91e-75 | 228 |
| MS.gene32446.t1 | MTR_7g023350 | 51.029 | 243 | 114 | 3 | 3 | 240 | 5 | 247 | 5.54e-73 | 223 |
| MS.gene32446.t1 | MTR_1g077540 | 43.083 | 253 | 133 | 3 | 3 | 244 | 5 | 257 | 3.32e-67 | 208 |
| MS.gene32446.t1 | MTR_6g069040 | 44.400 | 250 | 131 | 3 | 3 | 244 | 5 | 254 | 2.01e-66 | 206 |
| MS.gene32446.t1 | MTR_2g060360 | 39.130 | 230 | 129 | 3 | 10 | 232 | 10 | 235 | 2.67e-49 | 162 |
| MS.gene32446.t1 | MTR_5g063930 | 33.588 | 262 | 142 | 8 | 3 | 247 | 14 | 260 | 2.68e-31 | 116 |
| MS.gene32446.t1 | MTR_2g094270 | 34.363 | 259 | 134 | 11 | 10 | 241 | 31 | 280 | 2.80e-31 | 117 |
| MS.gene32446.t1 | MTR_7g101190 | 34.800 | 250 | 138 | 9 | 6 | 234 | 26 | 271 | 9.60e-31 | 115 |
| MS.gene32446.t1 | MTR_4g059390 | 34.483 | 261 | 130 | 12 | 10 | 241 | 30 | 278 | 5.03e-29 | 110 |
| MS.gene32446.t1 | MTR_3g118010 | 34.468 | 235 | 127 | 10 | 19 | 234 | 37 | 263 | 6.05e-28 | 108 |
| MS.gene32446.t1 | MTR_2g017620 | 33.906 | 233 | 145 | 6 | 18 | 247 | 23 | 249 | 5.77e-27 | 105 |
| MS.gene32446.t1 | MTR_1g070385 | 32.877 | 219 | 138 | 6 | 16 | 232 | 59 | 270 | 5.85e-27 | 109 |
| MS.gene32446.t1 | MTR_5g079570 | 35.652 | 230 | 139 | 7 | 18 | 245 | 39 | 261 | 6.71e-27 | 105 |
| MS.gene32446.t1 | MTR_4g415300 | 35.217 | 230 | 123 | 9 | 19 | 229 | 56 | 278 | 7.21e-27 | 105 |
| MS.gene32446.t1 | MTR_2g017620 | 33.906 | 233 | 145 | 6 | 18 | 247 | 37 | 263 | 9.66e-27 | 104 |
| MS.gene32446.t1 | MTR_5g010150 | 34.335 | 233 | 122 | 9 | 19 | 229 | 52 | 275 | 4.52e-26 | 103 |
| MS.gene32446.t1 | MTR_4g006730 | 35.610 | 205 | 112 | 7 | 24 | 220 | 80 | 272 | 6.54e-26 | 103 |
| MS.gene32446.t1 | MTR_3g008920 | 35.616 | 219 | 128 | 8 | 18 | 232 | 25 | 234 | 1.60e-25 | 101 |
| MS.gene32446.t1 | MTR_1g097840 | 35.885 | 209 | 115 | 7 | 24 | 225 | 79 | 275 | 2.80e-25 | 101 |
| MS.gene32446.t1 | MTR_8g098375 | 34.034 | 238 | 125 | 10 | 19 | 234 | 52 | 279 | 2.87e-25 | 101 |
| MS.gene32446.t1 | MTR_2g017660 | 33.778 | 225 | 138 | 8 | 18 | 239 | 38 | 254 | 1.28e-24 | 99.4 |
| MS.gene32446.t1 | MTR_2g104940 | 36.275 | 204 | 112 | 7 | 24 | 220 | 85 | 277 | 1.99e-24 | 99.4 |
| MS.gene32446.t1 | MTR_2g017590 | 32.530 | 249 | 158 | 7 | 2 | 247 | 20 | 261 | 2.88e-24 | 98.2 |
| MS.gene32446.t1 | MTR_1g095070 | 35.979 | 189 | 97 | 8 | 62 | 234 | 25 | 205 | 1.19e-23 | 95.5 |
| MS.gene32446.t1 | MTR_4g006730 | 35.025 | 197 | 108 | 7 | 32 | 220 | 1 | 185 | 1.40e-23 | 95.1 |
| MS.gene32446.t1 | MTR_4g006630 | 35.025 | 197 | 108 | 7 | 32 | 220 | 1 | 185 | 1.45e-23 | 95.1 |
| MS.gene32446.t1 | MTR_5g082070 | 34.043 | 235 | 136 | 8 | 10 | 228 | 46 | 277 | 1.74e-23 | 96.3 |
| MS.gene32446.t1 | MTR_3g070210 | 30.612 | 245 | 142 | 8 | 10 | 234 | 46 | 282 | 2.44e-23 | 95.9 |
| MS.gene32446.t1 | MTR_7g010650 | 33.649 | 211 | 134 | 4 | 19 | 228 | 37 | 242 | 6.55e-23 | 94.7 |
| MS.gene32446.t1 | MTR_4g084880 | 34.061 | 229 | 136 | 9 | 18 | 240 | 34 | 253 | 1.71e-22 | 93.6 |
| MS.gene32446.t1 | MTR_2g094270 | 34.211 | 228 | 115 | 10 | 10 | 210 | 31 | 250 | 4.02e-22 | 92.4 |
| MS.gene32446.t1 | MTR_8g087720 | 32.510 | 243 | 152 | 9 | 1 | 240 | 21 | 254 | 4.73e-22 | 92.0 |
| MS.gene32446.t1 | MTR_8g087710 | 30.973 | 226 | 145 | 8 | 18 | 240 | 38 | 255 | 1.46e-20 | 88.2 |
| MS.gene32446.t1 | MTR_2g017620 | 34.254 | 181 | 113 | 4 | 69 | 247 | 6 | 182 | 2.16e-20 | 85.9 |
| MS.gene32446.t1 | MTR_2g017610 | 31.111 | 225 | 139 | 7 | 7 | 221 | 19 | 237 | 7.97e-20 | 86.3 |
| MS.gene32446.t1 | MTR_2g017570 | 30.667 | 225 | 140 | 7 | 7 | 221 | 19 | 237 | 3.45e-19 | 84.3 |
| MS.gene32446.t1 | MTR_4g075570 | 28.358 | 268 | 160 | 8 | 3 | 247 | 36 | 294 | 8.56e-16 | 75.9 |
| MS.gene32446.t1 | MTR_4g075590 | 29.150 | 247 | 146 | 7 | 10 | 234 | 28 | 267 | 2.24e-15 | 74.3 |
| MS.gene32446.t1 | MTR_3g070210 | 29.018 | 224 | 132 | 8 | 10 | 213 | 46 | 262 | 9.86e-15 | 72.4 |
| MS.gene32446.t1 | MTR_1g095070 | 33.939 | 165 | 86 | 7 | 62 | 210 | 25 | 182 | 9.98e-14 | 68.2 |
| MS.gene32446.t1 | MTR_4g006730 | 34.706 | 170 | 91 | 7 | 24 | 185 | 80 | 237 | 1.90e-13 | 68.6 |
| MS.gene32446.t1 | MTR_4g415300 | 33.333 | 165 | 91 | 7 | 19 | 171 | 56 | 213 | 2.27e-12 | 65.1 |
| MS.gene32446.t1 | MTR_4g059390 | 32.258 | 186 | 93 | 9 | 10 | 173 | 30 | 204 | 3.52e-12 | 63.9 |
| MS.gene32446.t1 | MTR_1g097840 | 33.136 | 169 | 95 | 6 | 24 | 185 | 79 | 236 | 4.57e-12 | 64.7 |
| MS.gene32446.t1 | MTR_5g010150 | 31.765 | 170 | 92 | 7 | 19 | 173 | 52 | 212 | 1.33e-11 | 62.8 |
| MS.gene32446.t1 | MTR_8g098375 | 31.214 | 173 | 95 | 7 | 19 | 176 | 52 | 215 | 4.07e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32446.t1 | AT2G25810 | 76.327 | 245 | 58 | 0 | 1 | 245 | 1 | 245 | 1.12e-128 | 364 |
| MS.gene32446.t1 | AT2G36830 | 53.689 | 244 | 109 | 2 | 1 | 240 | 3 | 246 | 2.60e-86 | 257 |
| MS.gene32446.t1 | AT3G16240 | 52.439 | 246 | 110 | 4 | 1 | 240 | 1 | 245 | 3.02e-84 | 251 |
| MS.gene32446.t1 | AT3G26520 | 53.846 | 234 | 104 | 2 | 7 | 236 | 10 | 243 | 3.11e-82 | 246 |
| MS.gene32446.t1 | AT5G47450 | 51.899 | 237 | 110 | 2 | 1 | 233 | 1 | 237 | 5.02e-80 | 241 |
| MS.gene32446.t1 | AT4G17340 | 50.800 | 250 | 116 | 3 | 1 | 245 | 1 | 248 | 2.34e-77 | 234 |
| MS.gene32446.t1 | AT4G01470 | 48.996 | 249 | 122 | 3 | 1 | 244 | 3 | 251 | 1.89e-75 | 229 |
| MS.gene32446.t1 | AT1G73190 | 49.367 | 237 | 111 | 2 | 6 | 233 | 11 | 247 | 3.47e-71 | 219 |
| MS.gene32446.t1 | AT1G17810 | 47.266 | 256 | 118 | 3 | 6 | 244 | 11 | 266 | 6.48e-69 | 213 |
| MS.gene32446.t1 | AT3G47440 | 43.049 | 223 | 120 | 3 | 16 | 233 | 20 | 240 | 1.81e-50 | 166 |
| MS.gene32446.t1 | AT5G60660 | 33.730 | 252 | 144 | 9 | 10 | 241 | 30 | 278 | 4.46e-32 | 119 |
| MS.gene32446.t1 | AT4G35100 | 36.929 | 241 | 127 | 11 | 19 | 241 | 38 | 271 | 4.29e-31 | 116 |
| MS.gene32446.t1 | AT4G35100 | 36.929 | 241 | 127 | 11 | 19 | 241 | 38 | 271 | 4.29e-31 | 116 |
| MS.gene32446.t1 | AT2G37170 | 33.600 | 250 | 133 | 10 | 10 | 234 | 71 | 312 | 7.27e-31 | 117 |
| MS.gene32446.t1 | AT2G37180 | 34.137 | 249 | 137 | 10 | 10 | 236 | 28 | 271 | 8.68e-31 | 115 |
| MS.gene32446.t1 | AT2G37170 | 33.333 | 252 | 135 | 10 | 10 | 236 | 28 | 271 | 1.07e-30 | 115 |
| MS.gene32446.t1 | AT2G39010 | 32.927 | 246 | 140 | 9 | 10 | 234 | 29 | 270 | 2.65e-29 | 112 |
| MS.gene32446.t1 | AT3G53420 | 34.874 | 238 | 132 | 10 | 19 | 236 | 39 | 273 | 4.00e-29 | 111 |
| MS.gene32446.t1 | AT3G53420 | 34.874 | 238 | 132 | 10 | 19 | 236 | 39 | 273 | 4.00e-29 | 111 |
| MS.gene32446.t1 | AT3G54820 | 33.475 | 236 | 134 | 9 | 19 | 234 | 38 | 270 | 1.93e-28 | 109 |
| MS.gene32446.t1 | AT2G16850 | 33.061 | 245 | 141 | 9 | 19 | 246 | 36 | 274 | 7.74e-28 | 107 |
| MS.gene32446.t1 | AT4G00430 | 35.808 | 229 | 123 | 9 | 19 | 229 | 53 | 275 | 1.35e-26 | 104 |
| MS.gene32446.t1 | AT1G80760 | 35.238 | 210 | 118 | 6 | 19 | 221 | 80 | 278 | 1.62e-26 | 104 |
| MS.gene32446.t1 | AT1G01620 | 34.783 | 230 | 124 | 9 | 19 | 229 | 52 | 274 | 1.25e-25 | 102 |
| MS.gene32446.t1 | AT4G10380 | 34.222 | 225 | 130 | 6 | 19 | 236 | 78 | 291 | 4.11e-25 | 101 |
| MS.gene32446.t1 | AT4G23400 | 34.783 | 230 | 124 | 9 | 19 | 229 | 53 | 275 | 5.26e-25 | 100 |
| MS.gene32446.t1 | AT3G61430 | 34.934 | 229 | 123 | 9 | 19 | 228 | 52 | 273 | 9.04e-25 | 99.8 |
| MS.gene32446.t1 | AT3G61430 | 34.934 | 229 | 123 | 9 | 19 | 228 | 52 | 273 | 9.04e-25 | 99.8 |
| MS.gene32446.t1 | AT2G45960 | 34.934 | 229 | 123 | 9 | 19 | 228 | 52 | 273 | 9.52e-25 | 99.8 |
| MS.gene32446.t1 | AT5G37820 | 35.808 | 229 | 128 | 8 | 19 | 240 | 43 | 259 | 9.65e-24 | 97.1 |
| MS.gene32446.t1 | AT5G37820 | 35.808 | 229 | 128 | 8 | 19 | 240 | 79 | 295 | 1.22e-23 | 97.4 |
| MS.gene32446.t1 | AT4G19030 | 33.190 | 232 | 139 | 8 | 18 | 240 | 54 | 278 | 1.52e-23 | 96.7 |
| MS.gene32446.t1 | AT4G18910 | 33.047 | 233 | 138 | 7 | 18 | 240 | 51 | 275 | 3.83e-23 | 95.5 |
| MS.gene32446.t1 | AT5G37810 | 35.000 | 240 | 132 | 9 | 12 | 240 | 33 | 259 | 3.89e-23 | 95.5 |
| MS.gene32446.t1 | AT1G31885 | 34.742 | 213 | 125 | 5 | 18 | 221 | 42 | 249 | 7.08e-23 | 95.5 |
| MS.gene32446.t1 | AT1G52180 | 48.810 | 84 | 43 | 0 | 125 | 208 | 39 | 122 | 7.41e-23 | 90.5 |
| MS.gene32446.t1 | AT3G06100 | 31.193 | 218 | 141 | 6 | 16 | 230 | 43 | 254 | 2.56e-21 | 90.5 |
| MS.gene32446.t1 | AT1G01620 | 33.014 | 209 | 118 | 8 | 36 | 229 | 1 | 202 | 4.66e-21 | 88.2 |
| MS.gene32446.t1 | AT3G06100 | 31.429 | 210 | 135 | 6 | 24 | 230 | 3 | 206 | 1.19e-19 | 84.7 |
| MS.gene32446.t1 | AT1G31885 | 36.000 | 175 | 100 | 4 | 56 | 221 | 24 | 195 | 2.39e-19 | 84.7 |
| MS.gene32446.t1 | AT2G45960 | 32.701 | 211 | 116 | 9 | 19 | 210 | 52 | 255 | 5.75e-16 | 75.9 |
| MS.gene32446.t1 | AT2G45960 | 32.701 | 211 | 116 | 9 | 19 | 210 | 52 | 255 | 6.34e-16 | 75.9 |
| MS.gene32446.t1 | AT2G34390 | 29.091 | 220 | 143 | 6 | 18 | 229 | 47 | 261 | 4.44e-15 | 73.6 |
| MS.gene32446.t1 | AT2G34390 | 29.493 | 217 | 140 | 6 | 21 | 229 | 8 | 219 | 6.60e-15 | 72.4 |
| MS.gene32446.t1 | AT4G00430 | 34.146 | 164 | 91 | 7 | 19 | 171 | 53 | 210 | 9.32e-12 | 63.2 |
| MS.gene32446.t1 | AT2G39010 | 28.977 | 176 | 108 | 6 | 10 | 171 | 29 | 201 | 2.74e-11 | 62.0 |
Find 79 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAGAAAGGAGGACTTTC+TGG | 0.139053 | 1.4:-12328602 | MS.gene32446:CDS |
| ACAACAAATCCAACCAAAAT+TGG | 0.151579 | 1.4:+12328572 | None:intergenic |
| CTCATTGGTGGTGGGCTTGC+TGG | 0.168087 | 1.4:-12328428 | MS.gene32446:CDS |
| CTGCTTTGGTTAGTGGAAAT+TGG | 0.185229 | 1.4:-12328481 | MS.gene32446:CDS |
| TTCTGGACTTGGCCCAATTT+TGG | 0.189335 | 1.4:-12328585 | MS.gene32446:CDS |
| CCAGAAAGTCCTCCTTTCTT+TGG | 0.192856 | 1.4:+12328602 | None:intergenic |
| ACCTTTCTCTTTGTCTTTGC+TGG | 0.204008 | 1.4:-12332445 | MS.gene32446:CDS |
| ATGAATCCAGCAAGATCTTT+TGG | 0.260996 | 1.4:-12328506 | MS.gene32446:CDS |
| GGTTGTTCCTAAAGAGATTT+TGG | 0.265315 | 1.4:+12332522 | None:intergenic |
| CTCTTTGTCTTTGCTGGTGT+TGG | 0.290840 | 1.4:-12332439 | MS.gene32446:CDS |
| ATATCCGCCGGTCACGTTTC+CGG | 0.326886 | 1.4:-12331892 | MS.gene32446:CDS |
| TTTGGACCTGCTTTGGTTAG+TGG | 0.334512 | 1.4:-12328488 | MS.gene32446:CDS |
| ATTAGAGCTCGGATGCAATT+AGG | 0.343774 | 1.4:+12332484 | None:intergenic |
| TTTGAATCCCGCCGTGACCT+TGG | 0.347716 | 1.4:-12331863 | MS.gene32446:CDS |
| AATATGACCAAAATCTCTTT+AGG | 0.363930 | 1.4:-12332529 | MS.gene32446:CDS |
| GGGCTAACATCTTGGCTGGC+GGG | 0.363981 | 1.4:-12328547 | MS.gene32446:CDS |
| GGTGTACTCAAGGAATAGTT+TGG | 0.365185 | 1.4:-12328679 | MS.gene32446:CDS |
| GGCTATGGCACAAACTCTTC+TGG | 0.370987 | 1.4:-12331926 | MS.gene32446:CDS |
| TTGAATCCCGCCGTGACCTT+GGG | 0.371209 | 1.4:-12331862 | MS.gene32446:CDS |
| GTTCACTGTGTATGCAACTA+TGG | 0.382620 | 1.4:-12328630 | MS.gene32446:CDS |
| AAAAGATCTTGCTGGATTCA+TGG | 0.384219 | 1.4:+12328508 | None:intergenic |
| TCGTCCGTTCTATCTTATAT+TGG | 0.384445 | 1.4:-12331813 | MS.gene32446:CDS |
| GTGACCTTGGGCCTCCTTGT+TGG | 0.384806 | 1.4:-12331850 | MS.gene32446:CDS |
| TTGGCTGGCGGGGCTTTCGC+AGG | 0.386405 | 1.4:-12328536 | MS.gene32446:CDS |
| TGTTGTAGGGGCTAACATCT+TGG | 0.405323 | 1.4:-12328555 | MS.gene32446:CDS |
| TTGGGCCTCTCATTGGTGGT+GGG | 0.408100 | 1.4:-12328436 | MS.gene32446:CDS |
| ATTAGGTTGAGTAGCCTCTT+GGG | 0.416839 | 1.4:+12332501 | None:intergenic |
| TGGGTTGGGCCTCTCATTGG+TGG | 0.430148 | 1.4:-12328440 | MS.gene32446:CDS |
| GTTGGGCCTCTCATTGGTGG+TGG | 0.433600 | 1.4:-12328437 | MS.gene32446:CDS |
| GCTAAGTGAAGATGGTTTAG+TGG | 0.434560 | 1.4:-12331962 | MS.gene32446:CDS |
| CAACAAATCCAACCAAAATT+GGG | 0.439747 | 1.4:+12328573 | None:intergenic |
| AAAGGAGGACTTTCTGGACT+TGG | 0.441144 | 1.4:-12328596 | MS.gene32446:CDS |
| GCAGGTCCAAAAGATCTTGC+TGG | 0.444089 | 1.4:+12328500 | None:intergenic |
| TATCTTCTTCATTACCTCAC+TGG | 0.445469 | 1.4:-12331757 | MS.gene32446:CDS |
| TTAGATAAGCTAAGTGAAGA+TGG | 0.450182 | 1.4:-12331970 | MS.gene32446:intron |
| TGGAAATTGGACTGACCAAT+GGG | 0.457985 | 1.4:-12328468 | MS.gene32446:CDS |
| GGCTAACATCTTGGCTGGCG+GGG | 0.461965 | 1.4:-12328546 | MS.gene32446:CDS |
| AATTAGGTTGAGTAGCCTCT+TGG | 0.462527 | 1.4:+12332500 | None:intergenic |
| AGGTCACGGCGGGATTCAAA+TGG | 0.475016 | 1.4:+12331866 | None:intergenic |
| AACAAGGAGGCCCAAGGTCA+CGG | 0.484302 | 1.4:+12331852 | None:intergenic |
| CATACACTTAAAAGTGGAGT+AGG | 0.484564 | 1.4:-12328701 | MS.gene32446:CDS |
| CTTCTTCATTACCTCACTGG+TGG | 0.484926 | 1.4:-12331754 | MS.gene32446:CDS |
| CCAGTTCATACACTTAAAAG+TGG | 0.496805 | 1.4:-12328707 | MS.gene32446:CDS |
| GTGTACTCAAGGAATAGTTT+GGG | 0.499868 | 1.4:-12328678 | MS.gene32446:CDS |
| GTGGAAATTGGACTGACCAA+TGG | 0.502211 | 1.4:-12328469 | MS.gene32446:CDS |
| CTAAGTGAAGATGGTTTAGT+GGG | 0.510777 | 1.4:-12331961 | MS.gene32446:CDS |
| ATGGCCACCGGAAACGTGAC+CGG | 0.514153 | 1.4:+12331885 | None:intergenic |
| GGGGCTAACATCTTGGCTGG+CGG | 0.514242 | 1.4:-12328548 | MS.gene32446:CDS |
| ACCTTGGGCCTCCTTGTTGG+CGG | 0.515259 | 1.4:-12331847 | MS.gene32446:CDS |
| CGGTGATGTGGCCGCCAACA+AGG | 0.518058 | 1.4:+12331836 | None:intergenic |
| AGGAGGCCCAAGGTCACGGC+GGG | 0.520183 | 1.4:+12331856 | None:intergenic |
| GTAGGGGCTAACATCTTGGC+TGG | 0.532312 | 1.4:-12328551 | MS.gene32446:CDS |
| GTGACCGGCGGATATCATTA+CGG | 0.543565 | 1.4:+12331900 | None:intergenic |
| GATCAACATATAGCATCTGC+AGG | 0.544628 | 1.4:-12331787 | MS.gene32446:CDS |
| ACCAGCAAAGACAAAGAGAA+AGG | 0.549120 | 1.4:+12332444 | None:intergenic |
| CAATTTCCACTAACCAAAGC+AGG | 0.561106 | 1.4:+12328482 | None:intergenic |
| ACTATGGTTGATCCAAAGAA+AGG | 0.565384 | 1.4:-12328614 | MS.gene32446:CDS |
| AACTCATGTTCCTCTCCTTG+TGG | 0.565628 | 1.4:-12328375 | MS.gene32446:CDS |
| TTTGGTTGGATTTGTTGTAG+GGG | 0.576606 | 1.4:-12328567 | MS.gene32446:CDS |
| GCAAGCCCACCACCAATGAG+AGG | 0.582625 | 1.4:+12328431 | None:intergenic |
| GCCGCCAACAAGGAGGCCCA+AGG | 0.586419 | 1.4:+12331846 | None:intergenic |
| TGAATTCAACAATTAGAGCT+CGG | 0.592863 | 1.4:+12332473 | None:intergenic |
| CTTTCTTCATCCACAAGGAG+AGG | 0.595545 | 1.4:+12328365 | None:intergenic |
| GGCGGGATTCAAATGGCCAC+CGG | 0.596177 | 1.4:+12331873 | None:intergenic |
| AGTGGAGTAGGGTGTACTCA+AGG | 0.607563 | 1.4:-12328689 | MS.gene32446:CDS |
| CAATCCAATATAAGATAGAA+CGG | 0.608884 | 1.4:+12331809 | None:intergenic |
| TAGAACGGACGACGGTGATG+TGG | 0.614235 | 1.4:+12331824 | None:intergenic |
| AGTAGCTTTCTTCATCCACA+AGG | 0.615821 | 1.4:+12328360 | None:intergenic |
| TCCGCCGGTCACGTTTCCGG+TGG | 0.622015 | 1.4:-12331889 | MS.gene32446:CDS |
| ATACACTTAAAAGTGGAGTA+GGG | 0.631270 | 1.4:-12328700 | MS.gene32446:CDS |
| TATGGCACAAACTCTTCTGG+TGG | 0.643332 | 1.4:-12331923 | MS.gene32446:CDS |
| ATGGTTGATCCAAAGAAAGG+AGG | 0.657733 | 1.4:-12328611 | MS.gene32446:CDS |
| GTGGCCGTAATGATATCCGC+CGG | 0.663799 | 1.4:-12331904 | MS.gene32446:CDS |
| GCCACCGGAAACGTGACCGG+CGG | 0.669384 | 1.4:+12331888 | None:intergenic |
| CTCTTTAGGAACAACCCAAG+AGG | 0.672884 | 1.4:-12332515 | MS.gene32446:CDS |
| AAGGAGGCCCAAGGTCACGG+CGG | 0.691357 | 1.4:+12331855 | None:intergenic |
| TGATGTGGCCGCCAACAAGG+AGG | 0.709158 | 1.4:+12331839 | None:intergenic |
| CACTTACTAATCCACCAGTG+AGG | 0.739020 | 1.4:+12331743 | None:intergenic |
| ATATAAGATAGAACGGACGA+CGG | 0.768400 | 1.4:+12331816 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATAAAATTAAATTTTA+TGG | - | chr1.4:12330995-12331014 | MS.gene32446:intron | 0.0% |
| !! | TTAAAAAAACATTTATGTAA+AGG | - | chr1.4:12329402-12329421 | MS.gene32446:intron | 10.0% |
| !!! | ATATAATTTTATTAAAGGTT+TGG | - | chr1.4:12328589-12328608 | MS.gene32446:CDS | 10.0% |
| !!! | TTATCTAATGAAATAAATTT+TGG | + | chr1.4:12328902-12328921 | None:intergenic | 10.0% |
| !!! | TTCTGTTAATTTTTTTTTTA+AGG | + | chr1.4:12330972-12330991 | None:intergenic | 10.0% |
| !!! | TTTACATAAATGTTTTTTTA+AGG | + | chr1.4:12329403-12329422 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATGATGTTAATA+TGG | + | chr1.4:12330291-12330310 | None:intergenic | 10.0% |
| !! | CAATTCAAATATATTGATAT+GGG | + | chr1.4:12328547-12328566 | None:intergenic | 15.0% |
| !! | GAAAATATTGTTTGATATTA+TGG | - | chr1.4:12330852-12330871 | MS.gene32446:intron | 15.0% |
| !! | TAAATTTCTAAACTTTATCT+TGG | + | chr1.4:12329537-12329556 | None:intergenic | 15.0% |
| !! | TCAATTCAAATATATTGATA+TGG | + | chr1.4:12328548-12328567 | None:intergenic | 15.0% |
| !! | TTATAAGCAATATTTACATA+AGG | + | chr1.4:12329617-12329636 | None:intergenic | 15.0% |
| !!! | AATTAATTTCTAAAGTTTAG+AGG | - | chr1.4:12329494-12329513 | MS.gene32446:intron | 15.0% |
| !!! | CTTCACTTAATTTATTTTAA+GGG | - | chr1.4:12329575-12329594 | MS.gene32446:intron | 15.0% |
| !!! | TAACCAAATTAAATTTTTAG+AGG | - | chr1.4:12331119-12331138 | MS.gene32446:intron | 15.0% |
| !!! | TCTTCACTTAATTTATTTTA+AGG | - | chr1.4:12329574-12329593 | MS.gene32446:intron | 15.0% |
| !! | AAATAATGATCAAGATATTC+TGG | - | chr1.4:12332051-12332070 | MS.gene32446:intron | 20.0% |
| !! | AATAGAATATTCGTAACATT+GGG | + | chr1.4:12329883-12329902 | None:intergenic | 20.0% |
| !! | TAAATTAAGTGAAGAATTCA+AGG | + | chr1.4:12329569-12329588 | None:intergenic | 20.0% |
| !! | TCTTTATCAATTGTGATAAA+TGG | + | chr1.4:12332031-12332050 | None:intergenic | 20.0% |
| !! | TTTCAAATTACTATATGTGT+CGG | - | chr1.4:12328733-12328752 | MS.gene32446:intron | 20.0% |
| !!! | TATCAAACAATATTTTCGTA+AGG | + | chr1.4:12330849-12330868 | None:intergenic | 20.0% |
| !!! | TATTTTTAACTTCTTGACTT+AGG | + | chr1.4:12329445-12329464 | None:intergenic | 20.0% |
| !!! | TTTTGAAATATGTAGAATGT+GGG | - | chr1.4:12331606-12331625 | MS.gene32446:intron | 20.0% |
| ! | AAGATTTCGGATGAAAAAAA+AGG | + | chr1.4:12331145-12331164 | None:intergenic | 25.0% |
| ! | AAGTCTCTGAGTTAATTTAA+CGG | + | chr1.4:12328866-12328885 | None:intergenic | 25.0% |
| ! | ACAAATTATACCAAACTCAA+CGG | - | chr1.4:12330489-12330508 | MS.gene32446:intron | 25.0% |
| ! | AGAATTAAGTGATGAATTCT+AGG | - | chr1.4:12329464-12329483 | MS.gene32446:intron | 25.0% |
| ! | ATAATGCAAATAATAGGTGT+TGG | - | chr1.4:12330591-12330610 | MS.gene32446:intron | 25.0% |
| ! | ATGTTAGAAAGTTATTAGCT+AGG | + | chr1.4:12328802-12328821 | None:intergenic | 25.0% |
| ! | CAATCCAATATAAGATAGAA+CGG | + | chr1.4:12329078-12329097 | None:intergenic | 25.0% |
| ! | CGGTTATTAAAATATGTTAG+TGG | + | chr1.4:12330450-12330469 | None:intergenic | 25.0% |
| ! | GAATAGAATATTCGTAACAT+TGG | + | chr1.4:12329884-12329903 | None:intergenic | 25.0% |
| ! | GCTTAAAGCAAAAAAGTTAA+TGG | - | chr1.4:12330946-12330965 | MS.gene32446:intron | 25.0% |
| ! | GGTTGAGTTTATTTGTAATT+AGG | + | chr1.4:12330144-12330163 | None:intergenic | 25.0% |
| ! | GTTAATTTAACGGTAAAAGT+TGG | + | chr1.4:12328856-12328875 | None:intergenic | 25.0% |
| ! | TACTAATAACCTATGAAGTA+CGG | - | chr1.4:12328630-12328649 | MS.gene32446:CDS | 25.0% |
| ! | TTATTTGCATTATGTGGAAA+AGG | + | chr1.4:12330584-12330603 | None:intergenic | 25.0% |
| ! | TTCCACATAATGCAAATAAT+AGG | - | chr1.4:12330585-12330604 | MS.gene32446:intron | 25.0% |
| !! | AGGCCTCTAAAAATTTAATT+TGG | + | chr1.4:12331125-12331144 | None:intergenic | 25.0% |
| !! | CAATTTGTGTCTTTTATTGT+TGG | - | chr1.4:12332099-12332118 | MS.gene32446:intron | 25.0% |
| !! | TTGGTCATGAATCTAAATTT+TGG | + | chr1.4:12331024-12331043 | None:intergenic | 25.0% |
| !!! | ATATCACATTTTTTGTTGCT+TGG | + | chr1.4:12331296-12331315 | None:intergenic | 25.0% |
| !!! | ATATTTTAATAACCGTGTCA+AGG | - | chr1.4:12330455-12330474 | MS.gene32446:intron | 25.0% |
| !!! | GTTTTGAAATATGTAGAATG+TGG | - | chr1.4:12331605-12331624 | MS.gene32446:intron | 25.0% |
| !!! | TATCTCAATGACTTTTAGTT+TGG | + | chr1.4:12330342-12330361 | None:intergenic | 25.0% |
| !!! | TATTTTAATAACCGTGTCAA+GGG | - | chr1.4:12330456-12330475 | MS.gene32446:intron | 25.0% |
| !!! | TTTAGTGGGATTATTTTTTG+TGG | - | chr1.4:12328937-12328956 | MS.gene32446:intron | 25.0% |
| !!! | TTTTTGTTTTTTGCATTGTC+TGG | + | chr1.4:12331949-12331968 | None:intergenic | 25.0% |
| AAAAAAGCCTCAATTACTCT+TGG | + | chr1.4:12331043-12331062 | None:intergenic | 30.0% | |
| AAACTCAACCCGTAAATAAA+TGG | - | chr1.4:12330154-12330173 | MS.gene32446:intron | 30.0% | |
| AACCATATTATGTCATCCAA+TGG | + | chr1.4:12330098-12330117 | None:intergenic | 30.0% | |
| AACGAATCTCCTATATAAAC+CGG | - | chr1.4:12331409-12331428 | MS.gene32446:intron | 30.0% | |
| AATGTCAACTTCAATCACAA+GGG | - | chr1.4:12330676-12330695 | MS.gene32446:intron | 30.0% | |
| ACAACAAATCCAACCAAAAT+TGG | + | chr1.4:12332315-12332334 | None:intergenic | 30.0% | |
| AGGAAGTGATATTATACCAT+GGG | + | chr1.4:12330124-12330143 | None:intergenic | 30.0% | |
| ATACACTTAAAAGTGGAGTA+GGG | - | chr1.4:12332184-12332203 | MS.gene32446:intron | 30.0% | |
| ATACTTGGTATCTTTATGCT+TGG | + | chr1.4:12329981-12330000 | None:intergenic | 30.0% | |
| ATATAACAAAGATACGATGG+AGG | + | chr1.4:12330768-12330787 | None:intergenic | 30.0% | |
| ATGGTAATAAGCATCATGAA+AGG | + | chr1.4:12329841-12329860 | None:intergenic | 30.0% | |
| CAAATTATACCAAACTCAAC+GGG | - | chr1.4:12330490-12330509 | MS.gene32446:intron | 30.0% | |
| CAACAAATCCAACCAAAATT+GGG | + | chr1.4:12332314-12332333 | None:intergenic | 30.0% | |
| CACCTATTATTTGCATTATG+TGG | + | chr1.4:12330590-12330609 | None:intergenic | 30.0% | |
| GAAATAAATCCGTAAAGATG+TGG | + | chr1.4:12330370-12330389 | None:intergenic | 30.0% | |
| GACTATTGTAGGGAATTTAA+AGG | + | chr1.4:12329959-12329978 | None:intergenic | 30.0% | |
| GATATTATGCCACATCTTTA+CGG | - | chr1.4:12330358-12330377 | MS.gene32446:intron | 30.0% | |
| GATTTATTTCATACCAACCT+TGG | - | chr1.4:12330380-12330399 | MS.gene32446:intron | 30.0% | |
| GTTTGAAAAGTCTATGAAGA+TGG | + | chr1.4:12331740-12331759 | None:intergenic | 30.0% | |
| TACATAAGGAAATGCTAACA+AGG | + | chr1.4:12329603-12329622 | None:intergenic | 30.0% | |
| TAGGAAGTGATATTATACCA+TGG | + | chr1.4:12330125-12330144 | None:intergenic | 30.0% | |
| TATTAAATTGTTCCCCCAAA+GGG | + | chr1.4:12330645-12330664 | None:intergenic | 30.0% | |
| TATTGTAGGGAATTTAAAGG+AGG | + | chr1.4:12329956-12329975 | None:intergenic | 30.0% | |
| TCAGATCAAAGGTAATTGAA+AGG | + | chr1.4:12330013-12330032 | None:intergenic | 30.0% | |
| TCATGATGAACATAGATTCT+TGG | - | chr1.4:12331506-12331525 | MS.gene32446:intron | 30.0% | |
| TCTCTTATTCATCAGATCAA+AGG | + | chr1.4:12330024-12330043 | None:intergenic | 30.0% | |
| TGAATTCAACAATTAGAGCT+CGG | + | chr1.4:12328414-12328433 | None:intergenic | 30.0% | |
| TGAGGATAAAGACAAAAGAA+GGG | + | chr1.4:12330878-12330897 | None:intergenic | 30.0% | |
| TTAGATAAGCTAAGTGAAGA+TGG | - | chr1.4:12328914-12328933 | MS.gene32446:intron | 30.0% | |
| TTATTAAATTGTTCCCCCAA+AGG | + | chr1.4:12330646-12330665 | None:intergenic | 30.0% | |
| TTGAGGATAAAGACAAAAGA+AGG | + | chr1.4:12330879-12330898 | None:intergenic | 30.0% | |
| TTTATGCTTGGACTATTGTA+GGG | + | chr1.4:12329969-12329988 | None:intergenic | 30.0% | |
| TTTCAACTTGGTAGATACAT+CGG | + | chr1.4:12330207-12330226 | None:intergenic | 30.0% | |
| TTTCTCGAATTCTTTCAACT+TGG | + | chr1.4:12330219-12330238 | None:intergenic | 30.0% | |
| ! | ATTTTATGTGCTATCACTCT+AGG | + | chr1.4:12330542-12330561 | None:intergenic | 30.0% |
| ! | CATCGTATCTTTGTTATATG+GGG | - | chr1.4:12330769-12330788 | MS.gene32446:intron | 30.0% |
| ! | CCATCGTATCTTTGTTATAT+GGG | - | chr1.4:12330768-12330787 | MS.gene32446:intron | 30.0% |
| ! | GACTTATTGGAGTTTGTTTA+TGG | + | chr1.4:12331764-12331783 | None:intergenic | 30.0% |
| ! | TATTTTCGTAAGGTTGTAGA+TGG | + | chr1.4:12330839-12330858 | None:intergenic | 30.0% |
| ! | TCCATCGTATCTTTGTTATA+TGG | - | chr1.4:12330767-12330786 | MS.gene32446:intron | 30.0% |
| ! | TTGTTGCTTGGCTAAATATA+TGG | + | chr1.4:12331284-12331303 | None:intergenic | 30.0% |
| ! | TTTGTGTTACTAATGAGTCA+GGG | + | chr1.4:12331642-12331661 | None:intergenic | 30.0% |
| ! | TTTTATGTGCTATCACTCTA+GGG | + | chr1.4:12330541-12330560 | None:intergenic | 30.0% |
| ! | TTTTTGTCTTGTGTTATCCA+AGG | + | chr1.4:12331470-12331489 | None:intergenic | 30.0% |
| !! | ATACTTTTTGTGTGAATGAG+GGG | + | chr1.4:12331567-12331586 | None:intergenic | 30.0% |
| !! | GATACTTTTTGTGTGAATGA+GGG | + | chr1.4:12331568-12331587 | None:intergenic | 30.0% |
| !! | TTATGGAGGAGATTATTTTG+AGG | + | chr1.4:12330896-12330915 | None:intergenic | 30.0% |
| !!! | AAGAGTAATTGAGGCTTTTT+TGG | - | chr1.4:12331042-12331061 | MS.gene32446:intron | 30.0% |
| !!! | AATGACTTTTAGTTTGGTGT+TGG | + | chr1.4:12330336-12330355 | None:intergenic | 30.0% |
| !!! | ATGACTTTTAGTTTGGTGTT+GGG | + | chr1.4:12330335-12330354 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTGGATTTGTTGT+AGG | - | chr1.4:12332315-12332334 | MS.gene32446:intron | 30.0% |
| !!! | TGAGATGGAAGTTTTATTGA+GGG | + | chr1.4:12329754-12329773 | None:intergenic | 30.0% |
| !!! | TTGAGATGGAAGTTTTATTG+AGG | + | chr1.4:12329755-12329774 | None:intergenic | 30.0% |
| !!! | TTTTGGTTGGATTTGTTGTA+GGG | - | chr1.4:12332316-12332335 | MS.gene32446:intron | 30.0% |
| !!! | TTTTTTCATCCGAAATCTTG+AGG | - | chr1.4:12331146-12331165 | MS.gene32446:intron | 30.0% |
| AAAACCTATAATGTTCGACG+AGG | - | chr1.4:12331370-12331389 | MS.gene32446:intron | 35.0% | |
| AAAAGATCTTGCTGGATTCA+TGG | + | chr1.4:12332379-12332398 | None:intergenic | 35.0% | |
| AACACAAGACAAAAACCATG+AGG | - | chr1.4:12331475-12331494 | MS.gene32446:intron | 35.0% | |
| AACTAGTACCTACTGCAATA+AGG | - | chr1.4:12330418-12330437 | MS.gene32446:intron | 35.0% | |
| AAGGGGAGCTACAAAAAATA+TGG | - | chr1.4:12330694-12330713 | MS.gene32446:intron | 35.0% | |
| AAGTTATTAGCTAGGAAGCA+CGG | + | chr1.4:12328794-12328813 | None:intergenic | 35.0% | |
| ACATAATATGGTTATCCCCA+TGG | - | chr1.4:12330105-12330124 | MS.gene32446:intron | 35.0% | |
| ACTATGGTTGATCCAAAGAA+AGG | - | chr1.4:12332270-12332289 | MS.gene32446:intron | 35.0% | |
| ACTCATTAGTAACACAAACC+AGG | - | chr1.4:12331644-12331663 | MS.gene32446:intron | 35.0% | |
| AGTAATCATAGATGTCGTGT+CGG | + | chr1.4:12328697-12328716 | None:intergenic | 35.0% | |
| ATATAAGATAGAACGGACGA+CGG | + | chr1.4:12329071-12329090 | None:intergenic | 35.0% | |
| ATGCCCATCCATTTATTTAC+GGG | + | chr1.4:12330165-12330184 | None:intergenic | 35.0% | |
| ATGTCAACTTCAATCACAAG+GGG | - | chr1.4:12330677-12330696 | MS.gene32446:intron | 35.0% | |
| ATTCTATTCATGCTCAATCC+TGG | - | chr1.4:12329895-12329914 | MS.gene32446:intron | 35.0% | |
| ATTTGTTTGCTTTCGTGTCA+TGG | + | chr1.4:12329860-12329879 | None:intergenic | 35.0% | |
| CAAAGAAAACTACCCAAGAA+TGG | - | chr1.4:12329643-12329662 | MS.gene32446:intron | 35.0% | |
| CAACCCGTAAATAAATGGAT+GGG | - | chr1.4:12330159-12330178 | MS.gene32446:intron | 35.0% | |
| CAATGTCAACTTCAATCACA+AGG | - | chr1.4:12330675-12330694 | MS.gene32446:intron | 35.0% | |
| CATACACTTAAAAGTGGAGT+AGG | - | chr1.4:12332183-12332202 | MS.gene32446:intron | 35.0% | |
| CCAGTTCATACACTTAAAAG+TGG | - | chr1.4:12332177-12332196 | MS.gene32446:intron | 35.0% | |
| CCCATATAACAAAGATACGA+TGG | + | chr1.4:12330771-12330790 | None:intergenic | 35.0% | |
| CTAAAGCATATGACATCGTT+CGG | + | chr1.4:12329930-12329949 | None:intergenic | 35.0% | |
| CTAAATATATGGAGAGTAGC+GGG | + | chr1.4:12331273-12331292 | None:intergenic | 35.0% | |
| CTAAGTGAAGATGGTTTAGT+GGG | - | chr1.4:12328923-12328942 | MS.gene32446:intron | 35.0% | |
| CTCCATTGGATGACATAATA+TGG | - | chr1.4:12330093-12330112 | MS.gene32446:intron | 35.0% | |
| CTTTAAGCCTCTTAATCTGT+TGG | + | chr1.4:12330934-12330953 | None:intergenic | 35.0% | |
| CTTTATGCTTGGACTATTGT+AGG | + | chr1.4:12329970-12329989 | None:intergenic | 35.0% | |
| GAAAGGTTCTTCTTCATACT+TGG | + | chr1.4:12329996-12330015 | None:intergenic | 35.0% | |
| GAGAAGAACTCAAGACTTAT+TGG | + | chr1.4:12331777-12331796 | None:intergenic | 35.0% | |
| GATGCCCATCCATTTATTTA+CGG | + | chr1.4:12330166-12330185 | None:intergenic | 35.0% | |
| GCTAAATATATGGAGAGTAG+CGG | + | chr1.4:12331274-12331293 | None:intergenic | 35.0% | |
| GCTACAAAAAATATGGTGGT+TGG | - | chr1.4:12330701-12330720 | MS.gene32446:intron | 35.0% | |
| GGAAGTGATATTATACCATG+GGG | + | chr1.4:12330123-12330142 | None:intergenic | 35.0% | |
| GTGTACTCAAGGAATAGTTT+GGG | - | chr1.4:12332206-12332225 | MS.gene32446:intron | 35.0% | |
| TATAGTGCTTCATCTTAAGG+CGG | + | chr1.4:12331836-12331855 | None:intergenic | 35.0% | |
| TATCTTCTTCATTACCTCAC+TGG | - | chr1.4:12329127-12329146 | MS.gene32446:intron | 35.0% | |
| TATGAAGTACGGATACTTCT+CGG | - | chr1.4:12328641-12328660 | MS.gene32446:CDS | 35.0% | |
| TCAACCCGTAAATAAATGGA+TGG | - | chr1.4:12330158-12330177 | MS.gene32446:intron | 35.0% | |
| TCGTATAGTGCTTCATCTTA+AGG | + | chr1.4:12331839-12331858 | None:intergenic | 35.0% | |
| TCGTCCGTTCTATCTTATAT+TGG | - | chr1.4:12329071-12329090 | MS.gene32446:intron | 35.0% | |
| TGATGAACATAGATTCTTGG+AGG | - | chr1.4:12331509-12331528 | MS.gene32446:intron | 35.0% | |
| TGCTATAAGGCAACTCTATT+GGG | + | chr1.4:12330073-12330092 | None:intergenic | 35.0% | |
| TGGATGAAGAAAGCTACTAA+GGG | - | chr1.4:12332529-12332548 | MS.gene32446:CDS | 35.0% | |
| TGGGATGAAGTTAATAGTAG+AGG | + | chr1.4:12328528-12328547 | None:intergenic | 35.0% | |
| TTATTGCAGTAGGTACTAGT+TGG | + | chr1.4:12330419-12330438 | None:intergenic | 35.0% | |
| TTCATGACCAAGAGTAATTG+AGG | - | chr1.4:12331033-12331052 | MS.gene32446:intron | 35.0% | |
| TTCGGAGATTATGTGCAATA+TGG | + | chr1.4:12331222-12331241 | None:intergenic | 35.0% | |
| TTGAAGTTGACATTGTTCTC+AGG | + | chr1.4:12330670-12330689 | None:intergenic | 35.0% | |
| ! | AAAAAATATGGTGGTTGGCT+TGG | - | chr1.4:12330706-12330725 | MS.gene32446:intron | 35.0% |
| ! | AAGTTGGTTGAATGTGTGTT+CGG | + | chr1.4:12331240-12331259 | None:intergenic | 35.0% |
| ! | ATCATGAAGAGTATACCTCA+TGG | + | chr1.4:12331493-12331512 | None:intergenic | 35.0% |
| ! | ATGAATCCAGCAAGATCTTT+TGG | - | chr1.4:12332378-12332397 | MS.gene32446:intron | 35.0% |
| ! | ATGTGGTAGAAATGGTTTGT+GGG | + | chr1.4:12330618-12330637 | None:intergenic | 35.0% |
| ! | GGTTGTTCCTAAAGAGATTT+TGG | + | chr1.4:12328365-12328384 | None:intergenic | 35.0% |
| ! | GTTCCTTTCAGACATTTTTG+AGG | + | chr1.4:12329816-12329835 | None:intergenic | 35.0% |
| ! | GTTTGTGTTACTAATGAGTC+AGG | + | chr1.4:12331643-12331662 | None:intergenic | 35.0% |
| ! | TCTAGGGTTAACTTATGGAT+AGG | + | chr1.4:12330525-12330544 | None:intergenic | 35.0% |
| ! | TTGTGTTACTAATGAGTCAG+GGG | + | chr1.4:12331641-12331660 | None:intergenic | 35.0% |
| !! | ATCACTCTAGGGTTAACTTA+TGG | + | chr1.4:12330530-12330549 | None:intergenic | 35.0% |
| !! | CATTCACACAAAAAGTATCG+AGG | - | chr1.4:12331569-12331588 | MS.gene32446:intron | 35.0% |
| !! | CCACTTTTAAGTGTATGAAC+TGG | + | chr1.4:12332180-12332199 | None:intergenic | 35.0% |
| !! | CGATACTTTTTGTGTGAATG+AGG | + | chr1.4:12331569-12331588 | None:intergenic | 35.0% |
| !! | TTTGGTTGGATTTGTTGTAG+GGG | - | chr1.4:12332317-12332336 | MS.gene32446:intron | 35.0% |
| !!! | ACATTTTTGAGGCGAACATT+AGG | + | chr1.4:12329805-12329824 | None:intergenic | 35.0% |
| !!! | ATGTGGAAAAGGTTTTGTTC+TGG | + | chr1.4:12330573-12330592 | None:intergenic | 35.0% |
| !!! | ATTTTTGAGGCGAACATTAG+GGG | + | chr1.4:12329803-12329822 | None:intergenic | 35.0% |
| !!! | CATTTTTGAGGCGAACATTA+GGG | + | chr1.4:12329804-12329823 | None:intergenic | 35.0% |
| !!! | GAGATGGAAGTTTTATTGAG+GGG | + | chr1.4:12329753-12329772 | None:intergenic | 35.0% |
| !!! | GGGATTATTTTTTGTGGCTA+TGG | - | chr1.4:12328943-12328962 | MS.gene32446:intron | 35.0% |
| !!! | TGACTTTTAGTTTGGTGTTG+GGG | + | chr1.4:12330334-12330353 | None:intergenic | 35.0% |
| AACATCTTTACTCCCTTCTG+TGG | - | chr1.4:12331861-12331880 | MS.gene32446:CDS | 40.0% | |
| AATAAGATGCCCGTTGAGTT+TGG | + | chr1.4:12330502-12330521 | None:intergenic | 40.0% | |
| ACACTTCACAATGACTGTGA+AGG | + | chr1.4:12330816-12330835 | None:intergenic | 40.0% | |
| ACATTAGGGGTGAAATTGCT+CGG | + | chr1.4:12329790-12329809 | None:intergenic | 40.0% | |
| ACCAGCAAAGACAAAGAGAA+AGG | + | chr1.4:12328443-12328462 | None:intergenic | 40.0% | |
| ACCTTTCTCTTTGTCTTTGC+TGG | - | chr1.4:12328439-12328458 | MS.gene32446:CDS | 40.0% | |
| ACGGACACAAATATGGATAC+TGG | + | chr1.4:12328775-12328794 | None:intergenic | 40.0% | |
| AGTAGCTTTCTTCATCCACA+AGG | + | chr1.4:12332527-12332546 | None:intergenic | 40.0% | |
| ATGGTTGAGCAATGGATGTT+TGG | + | chr1.4:12331721-12331740 | None:intergenic | 40.0% | |
| ATGGTTGATCCAAAGAAAGG+AGG | - | chr1.4:12332273-12332292 | MS.gene32446:intron | 40.0% | |
| ATGTGCAATATGGTGTGAGT+AGG | + | chr1.4:12331212-12331231 | None:intergenic | 40.0% | |
| ATTAGAGCTCGGATGCAATT+AGG | + | chr1.4:12328403-12328422 | None:intergenic | 40.0% | |
| CAATTTCCACTAACCAAAGC+AGG | + | chr1.4:12332405-12332424 | None:intergenic | 40.0% | |
| CATGTGGTAGAAATGGTTTG+TGG | + | chr1.4:12330619-12330638 | None:intergenic | 40.0% | |
| CTATAATTCTGCCTAGTTCG+AGG | - | chr1.4:12331343-12331362 | MS.gene32446:intron | 40.0% | |
| CTATGAAGATGGTTGAGCAA+TGG | + | chr1.4:12331729-12331748 | None:intergenic | 40.0% | |
| CTCGAACTAGGCAGAATTAT+AGG | + | chr1.4:12331345-12331364 | None:intergenic | 40.0% | |
| CTGCTTTGGTTAGTGGAAAT+TGG | - | chr1.4:12332403-12332422 | MS.gene32446:intron | 40.0% | |
| CTTAGCATGCACATGATAAG+AGG | - | chr1.4:12331432-12331451 | MS.gene32446:intron | 40.0% | |
| GAACACACATTCAACCAACT+TGG | - | chr1.4:12331239-12331258 | MS.gene32446:intron | 40.0% | |
| GAGCTTCATCTTCCATTCTT+GGG | + | chr1.4:12329658-12329677 | None:intergenic | 40.0% | |
| GATCAACATATAGCATCTGC+AGG | - | chr1.4:12329097-12329116 | MS.gene32446:intron | 40.0% | |
| GCTAAGTGAAGATGGTTTAG+TGG | - | chr1.4:12328922-12328941 | MS.gene32446:intron | 40.0% | |
| GGGAGCTACAAAAAATATGG+TGG | - | chr1.4:12330697-12330716 | MS.gene32446:intron | 40.0% | |
| GGTGTACTCAAGGAATAGTT+TGG | - | chr1.4:12332205-12332224 | MS.gene32446:intron | 40.0% | |
| GTGCTATAAGGCAACTCTAT+TGG | + | chr1.4:12330074-12330093 | None:intergenic | 40.0% | |
| GTGGATGAAGAAAGCTACTA+AGG | - | chr1.4:12332528-12332547 | MS.gene32446:CDS | 40.0% | |
| GTTCACTGTGTATGCAACTA+TGG | - | chr1.4:12332254-12332273 | MS.gene32446:intron | 40.0% | |
| TAACACAAACCAGGTCATCA+AGG | - | chr1.4:12331653-12331672 | MS.gene32446:intron | 40.0% | |
| TCGCCTCAAAAATGTCTGAA+AGG | - | chr1.4:12329810-12329829 | MS.gene32446:intron | 40.0% | |
| TGAGCTTCATCTTCCATTCT+TGG | + | chr1.4:12329659-12329678 | None:intergenic | 40.0% | |
| TGGAAATTGGACTGACCAAT+GGG | - | chr1.4:12332416-12332435 | MS.gene32446:intron | 40.0% | |
| TGTAGGGAATTTAAAGGAGG+TGG | + | chr1.4:12329953-12329972 | None:intergenic | 40.0% | |
| TGTGCAATATGGTGTGAGTA+GGG | + | chr1.4:12331211-12331230 | None:intergenic | 40.0% | |
| TTATCATGTGCATGCTAAGC+CGG | + | chr1.4:12331431-12331450 | None:intergenic | 40.0% | |
| TTGAGCAATGGATGTTTGGA+AGG | + | chr1.4:12331717-12331736 | None:intergenic | 40.0% | |
| ! | AAGATCTTTTGGACCTGCTT+TGG | - | chr1.4:12332389-12332408 | MS.gene32446:intron | 40.0% |
| ! | CAAAGATACGATGGAGGTTT+TGG | + | chr1.4:12330762-12330781 | None:intergenic | 40.0% |
| ! | CATGCTAAGCCGGTTTATAT+AGG | + | chr1.4:12331421-12331440 | None:intergenic | 40.0% |
| ! | GGTTTTACGCCTCAAGATTT+CGG | + | chr1.4:12331158-12331177 | None:intergenic | 40.0% |
| ! | GTATCGAGGTCTTTTCTAGA+TGG | - | chr1.4:12331583-12331602 | MS.gene32446:intron | 40.0% |
| ! | TCATCCAATGGAGTGCTATA+AGG | + | chr1.4:12330086-12330105 | None:intergenic | 40.0% |
| ! | TTTTGGATGCAAGACCGTTA+GGG | + | chr1.4:12331540-12331559 | None:intergenic | 40.0% |
| !! | AATTAGGTTGAGTAGCCTCT+TGG | + | chr1.4:12328387-12328406 | None:intergenic | 40.0% |
| !! | ACAATGACTGTGAAGGTGTT+GGG | + | chr1.4:12330809-12330828 | None:intergenic | 40.0% |
| !! | ATTAGGTTGAGTAGCCTCTT+GGG | + | chr1.4:12328386-12328405 | None:intergenic | 40.0% |
| !! | GAGAAGTATCCGTACTTCAT+AGG | + | chr1.4:12328642-12328661 | None:intergenic | 40.0% |
| !! | TGCTGGTGTTGGTTCAAAAA+TGG | - | chr1.4:12328456-12328475 | MS.gene32446:CDS | 40.0% |
| !!! | ACCAATGGGTTTTTTGGGTT+GGG | - | chr1.4:12332430-12332449 | MS.gene32446:CDS | 40.0% |
| !!! | AGGTTTTAAAGCCTCGAACT+AGG | + | chr1.4:12331357-12331376 | None:intergenic | 40.0% |
| !!! | GACTGACCAATGGGTTTTTT+GGG | - | chr1.4:12332425-12332444 | MS.gene32446:CDS | 40.0% |
| !!! | GGAAGTTTTATTGAGGGGTT+GGG | + | chr1.4:12329748-12329767 | None:intergenic | 40.0% |
| !!! | TGGAAGTTTTATTGAGGGGT+TGG | + | chr1.4:12329749-12329768 | None:intergenic | 40.0% |
| AAAGGAGGACTTTCTGGACT+TGG | - | chr1.4:12332288-12332307 | MS.gene32446:intron | 45.0% | |
| AACTCATGTTCCTCTCCTTG+TGG | - | chr1.4:12332509-12332528 | MS.gene32446:CDS | 45.0% | |
| AATCTCCTCCATAACTCACC+AGG | - | chr1.4:12330902-12330921 | MS.gene32446:intron | 45.0% | |
| AATGTTCGACGAGGAAGCAA+TGG | - | chr1.4:12331379-12331398 | MS.gene32446:intron | 45.0% | |
| ATCTCCTCCATAACTCACCA+GGG | - | chr1.4:12330903-12330922 | MS.gene32446:intron | 45.0% | |
| CACTTACTAATCCACCAGTG+AGG | + | chr1.4:12329144-12329163 | None:intergenic | 45.0% | |
| CCAAAGAAAGGAGGACTTTC+TGG | - | chr1.4:12332282-12332301 | MS.gene32446:intron | 45.0% | |
| CCAGAAAGTCCTCCTTTCTT+TGG | + | chr1.4:12332285-12332304 | None:intergenic | 45.0% | |
| CTCTTTGTCTTTGCTGGTGT+TGG | - | chr1.4:12328445-12328464 | MS.gene32446:CDS | 45.0% | |
| CTTCTTCATTACCTCACTGG+TGG | - | chr1.4:12329130-12329149 | MS.gene32446:intron | 45.0% | |
| CTTTCTTCATCCACAAGGAG+AGG | + | chr1.4:12332522-12332541 | None:intergenic | 45.0% | |
| GAGTGTAACGCAAGAGCAAA+AGG | - | chr1.4:12330042-12330061 | MS.gene32446:intron | 45.0% | |
| GCTTCCTCGTCGAACATTAT+AGG | + | chr1.4:12331377-12331396 | None:intergenic | 45.0% | |
| GGAAGATGAAGCTCATTCTG+AGG | - | chr1.4:12329664-12329683 | MS.gene32446:intron | 45.0% | |
| GTACGGATACTTCTCGGATT+AGG | - | chr1.4:12328647-12328666 | MS.gene32446:CDS | 45.0% | |
| GTGGAAATTGGACTGACCAA+TGG | - | chr1.4:12332415-12332434 | MS.gene32446:intron | 45.0% | |
| GTTGCCTTATAGCACTCCAT+TGG | - | chr1.4:12330079-12330098 | MS.gene32446:intron | 45.0% | |
| TATGGATACTGGACACGACA+CGG | + | chr1.4:12328764-12328783 | None:intergenic | 45.0% | |
| TATGGCACAAACTCTTCTGG+TGG | - | chr1.4:12328961-12328980 | MS.gene32446:intron | 45.0% | |
| TCTACCACATGATGCCCTTT+GGG | - | chr1.4:12330628-12330647 | MS.gene32446:intron | 45.0% | |
| TCTTGGAGGACATTCCCTAA+CGG | - | chr1.4:12331523-12331542 | MS.gene32446:intron | 45.0% | |
| TGTTGTAGGGGCTAACATCT+TGG | - | chr1.4:12332329-12332348 | MS.gene32446:intron | 45.0% | |
| TTCTACCACATGATGCCCTT+TGG | - | chr1.4:12330627-12330646 | MS.gene32446:intron | 45.0% | |
| TTGAGCTAGTGACATGGAGA+TGG | + | chr1.4:12330266-12330285 | None:intergenic | 45.0% | |
| TTGCAGTAGGTACTAGTTGG+AGG | + | chr1.4:12330416-12330435 | None:intergenic | 45.0% | |
| TTTGGACCTGCTTTGGTTAG+TGG | - | chr1.4:12332396-12332415 | MS.gene32446:intron | 45.0% | |
| ! | AATATATGGAGAGTAGCGGG+TGG | + | chr1.4:12331270-12331289 | None:intergenic | 45.0% |
| ! | AGATTTTCAGTGTCCGTTCC+GGG | + | chr1.4:12331907-12331926 | None:intergenic | 45.0% |
| ! | AGGAAGCACGGACACAAATA+TGG | + | chr1.4:12328782-12328801 | None:intergenic | 45.0% |
| ! | AGGGCATCATGTGGTAGAAA+TGG | + | chr1.4:12330626-12330645 | None:intergenic | 45.0% |
| ! | ATGGTGTTGAGCTAGTGACA+TGG | + | chr1.4:12330272-12330291 | None:intergenic | 45.0% |
| ! | CACAATGACTGTGAAGGTGT+TGG | + | chr1.4:12330810-12330829 | None:intergenic | 45.0% |
| ! | CTCTTTAGGAACAACCCAAG+AGG | - | chr1.4:12328369-12328388 | MS.gene32446:CDS | 45.0% |
| ! | GAGATTTTCAGTGTCCGTTC+CGG | + | chr1.4:12331908-12331927 | None:intergenic | 45.0% |
| ! | GTTGGTTCAAAAATGGCTGC+TGG | - | chr1.4:12328463-12328482 | MS.gene32446:CDS | 45.0% |
| ! | TAGCTTTTGCACCCTTGACA+CGG | + | chr1.4:12330470-12330489 | None:intergenic | 45.0% |
| ! | TTCTGGACTTGGCCCAATTT+TGG | - | chr1.4:12332299-12332318 | MS.gene32446:intron | 45.0% |
| ! | TTTTTGTGTGAATGAGGGGC+TGG | + | chr1.4:12331563-12331582 | None:intergenic | 45.0% |
| !! | AAATATGGTGGTTGGCTTGG+AGG | - | chr1.4:12330709-12330728 | MS.gene32446:intron | 45.0% |
| !! | AATATGGTGGTTGGCTTGGA+GGG | - | chr1.4:12330710-12330729 | MS.gene32446:intron | 45.0% |
| !! | AGATACGATGGAGGTTTTGG+AGG | + | chr1.4:12330759-12330778 | None:intergenic | 45.0% |
| !! | AGTTTGGTGTTGGGGTTTCA+GGG | + | chr1.4:12330326-12330345 | None:intergenic | 45.0% |
| !! | CAATGACTGTGAAGGTGTTG+GGG | + | chr1.4:12330808-12330827 | None:intergenic | 45.0% |
| !! | GTTTTGGATGCAAGACCGTT+AGG | + | chr1.4:12331541-12331560 | None:intergenic | 45.0% |
| !! | TAGTTTGGTGTTGGGGTTTC+AGG | + | chr1.4:12330327-12330346 | None:intergenic | 45.0% |
| !! | TTCTCGGATTAGGAGTGTTC+TGG | - | chr1.4:12328657-12328676 | MS.gene32446:CDS | 45.0% |
| !!! | AGAGGCATCTTTTGATGCCT+TGG | - | chr1.4:12331450-12331469 | MS.gene32446:intron | 45.0% |
| !!! | GACCAATGGGTTTTTTGGGT+TGG | - | chr1.4:12332429-12332448 | MS.gene32446:CDS | 45.0% |
| !!! | GGACTGACCAATGGGTTTTT+TGG | - | chr1.4:12332424-12332443 | MS.gene32446:CDS | 45.0% |
| !! | AATAAAATTATATTGAAAAT+TGG | + | chr1.4:12328582-12328601 | None:intergenic | 5.0% |
| !!! | TTTCAATATAATTTTATTAA+AGG | - | chr1.4:12328584-12328603 | MS.gene32446:CDS | 5.0% |
| AGTGGAGTAGGGTGTACTCA+AGG | - | chr1.4:12332195-12332214 | MS.gene32446:intron | 50.0% | |
| CAATATGGTGTGAGTAGGGC+CGG | + | chr1.4:12331207-12331226 | None:intergenic | 50.0% | |
| CACAAACCAGGTCATCAAGG+TGG | - | chr1.4:12331656-12331675 | MS.gene32446:intron | 50.0% | |
| CTACCACATGATGCCCTTTG+GGG | - | chr1.4:12330629-12330648 | MS.gene32446:intron | 50.0% | |
| GAGGCGTAAAACCCTTGCTT+GGG | - | chr1.4:12331165-12331184 | MS.gene32446:intron | 50.0% | |
| GCAGGTCCAAAAGATCTTGC+TGG | + | chr1.4:12332387-12332406 | None:intergenic | 50.0% | |
| GCCCAACCCAAAAAACCCAT+TGG | + | chr1.4:12332434-12332453 | None:intergenic | 50.0% | |
| GGAGGGGTTGTTAGTTGAGA+TGG | + | chr1.4:12329769-12329788 | None:intergenic | 50.0% | |
| GGCTATGGCACAAACTCTTC+TGG | - | chr1.4:12328958-12328977 | MS.gene32446:intron | 50.0% | |
| GGTCGGTCCAACAGATTAAG+AGG | - | chr1.4:12330924-12330943 | MS.gene32446:intron | 50.0% | |
| GTGACCGGCGGATATCATTA+CGG | + | chr1.4:12328987-12329006 | None:intergenic | 50.0% | |
| GTGGTGACATGCACAACTCA+TGG | - | chr1.4:12331675-12331694 | MS.gene32446:intron | 50.0% | |
| GTTGCCTAGATGCCACAGAA+GGG | + | chr1.4:12331876-12331895 | None:intergenic | 50.0% | |
| TACCACATGATGCCCTTTGG+GGG | - | chr1.4:12330630-12330649 | MS.gene32446:intron | 50.0% | |
| TACTCCCTTCTGTGGCATCT+AGG | - | chr1.4:12331869-12331888 | MS.gene32446:CDS | 50.0% | |
| TAGGGGTGAAATTGCTCGGA+GGG | + | chr1.4:12329786-12329805 | None:intergenic | 50.0% | |
| TGAGGCGTAAAACCCTTGCT+TGG | - | chr1.4:12331164-12331183 | MS.gene32446:intron | 50.0% | |
| TGTTGCCTAGATGCCACAGA+AGG | + | chr1.4:12331877-12331896 | None:intergenic | 50.0% | |
| TTAATCTGTTGGACCGACCC+TGG | + | chr1.4:12330923-12330942 | None:intergenic | 50.0% | |
| TTAGGGGTGAAATTGCTCGG+AGG | + | chr1.4:12329787-12329806 | None:intergenic | 50.0% | |
| TTGGAGGGAGGTGACATGTA+CGG | - | chr1.4:12330725-12330744 | MS.gene32446:intron | 50.0% | |
| ! | AAACCCTTGCTTGGGTTGCT+TGG | - | chr1.4:12331173-12331192 | MS.gene32446:intron | 50.0% |
| ! | ATGTCACCACCTTGATGACC+TGG | + | chr1.4:12331665-12331684 | None:intergenic | 50.0% |
| ! | ATTTTCAGTGTCCGTTCCGG+GGG | + | chr1.4:12331905-12331924 | None:intergenic | 50.0% |
| ! | CATAGATGTCGTGTCGGTGT+TGG | + | chr1.4:12328691-12328710 | None:intergenic | 50.0% |
| ! | GATTTTCAGTGTCCGTTCCG+GGG | + | chr1.4:12331906-12331925 | None:intergenic | 50.0% |
| ! | GGAATGCGCCTTATTGCAGT+AGG | + | chr1.4:12330429-12330448 | None:intergenic | 50.0% |
| !! | GGACTTGGCCCAATTTTGGT+TGG | - | chr1.4:12332303-12332322 | MS.gene32446:intron | 50.0% |
| !! | GTTTGGTGTTGGGGTTTCAG+GGG | + | chr1.4:12330325-12330344 | None:intergenic | 50.0% |
| !! | TTTGGTGTTGGGGTTTCAGG+GGG | + | chr1.4:12330324-12330343 | None:intergenic | 50.0% |
| !!! | TGTGAATGAGGGGCTGGTTT+TGG | + | chr1.4:12331557-12331576 | None:intergenic | 50.0% |
| !!! | TTTTGGGTTGGGCCTCTCAT+TGG | - | chr1.4:12332441-12332460 | MS.gene32446:CDS | 50.0% |
| AACAAGGAGGCCCAAGGTCA+CGG | + | chr1.4:12329035-12329054 | None:intergenic | 55.0% | |
| AGGCGTCTGGTATCCAAGGT+TGG | + | chr1.4:12330396-12330415 | None:intergenic | 55.0% | |
| AGGGGTGAAATTGCTCGGAG+GGG | + | chr1.4:12329785-12329804 | None:intergenic | 55.0% | |
| AGGTCACGGCGGGATTCAAA+TGG | + | chr1.4:12329021-12329040 | None:intergenic | 55.0% | |
| ATATCCGCCGGTCACGTTTC+CGG | - | chr1.4:12328992-12329011 | MS.gene32446:intron | 55.0% | |
| ATCGTTCGGATGTTCGTGCC+AGG | + | chr1.4:12329916-12329935 | None:intergenic | 55.0% | |
| CCTCCATAACTCACCAGGGT+CGG | - | chr1.4:12330907-12330926 | MS.gene32446:intron | 55.0% | |
| GTAGGGGCTAACATCTTGGC+TGG | - | chr1.4:12332333-12332352 | MS.gene32446:intron | 55.0% | |
| GTGGCCGTAATGATATCCGC+CGG | - | chr1.4:12328980-12328999 | MS.gene32446:intron | 55.0% | |
| TACATCGGCACTAGTGTGCG+AGG | + | chr1.4:12330192-12330211 | None:intergenic | 55.0% | |
| TAGAACGGACGACGGTGATG+TGG | + | chr1.4:12329063-12329082 | None:intergenic | 55.0% | |
| TCTAGGCAACAGTGAACCCC+CGG | - | chr1.4:12331886-12331905 | MS.gene32446:CDS | 55.0% | |
| TGGAGGGAGGTGACATGTAC+GGG | - | chr1.4:12330726-12330745 | MS.gene32446:intron | 55.0% | |
| TTGAATCCCGCCGTGACCTT+GGG | - | chr1.4:12329022-12329041 | MS.gene32446:intron | 55.0% | |
| TTTGAATCCCGCCGTGACCT+TGG | - | chr1.4:12329021-12329040 | MS.gene32446:intron | 55.0% | |
| ! | GGTGTTGGGGTCATCTAGAG+TGG | + | chr1.4:12330795-12330814 | None:intergenic | 55.0% |
| ! | TTGGGCCTCTCATTGGTGGT+GGG | - | chr1.4:12332448-12332467 | MS.gene32446:CDS | 55.0% |
| !! | AGGTACTAGTTGGAGGCGTC+TGG | + | chr1.4:12330409-12330428 | None:intergenic | 55.0% |
| !! | TGTCGTGTCGGTGTTGGTGT+CGG | + | chr1.4:12328685-12328704 | None:intergenic | 55.0% |
| !! | TTCCCCCAAAGGGCATCATG+TGG | + | chr1.4:12330635-12330654 | None:intergenic | 55.0% |
| !! | TTGGAGGCGTCTGGTATCCA+AGG | + | chr1.4:12330400-12330419 | None:intergenic | 55.0% |
| ACCTTGGGCCTCCTTGTTGG+CGG | - | chr1.4:12329037-12329056 | MS.gene32446:intron | 60.0% | |
| AGGGCCAAGCAACCCAAGCA+AGG | + | chr1.4:12331180-12331199 | None:intergenic | 60.0% | |
| ATGGCCACCGGAAACGTGAC+CGG | + | chr1.4:12329002-12329021 | None:intergenic | 60.0% | |
| CCGACCCTGGTGAGTTATGG+AGG | + | chr1.4:12330910-12330929 | None:intergenic | 60.0% | |
| GCAACAGTGAACCCCCGGAA+CGG | - | chr1.4:12331891-12331910 | MS.gene32446:CDS | 60.0% | |
| GCAAGCCCACCACCAATGAG+AGG | + | chr1.4:12332456-12332475 | None:intergenic | 60.0% | |
| GGACCGACCCTGGTGAGTTA+TGG | + | chr1.4:12330913-12330932 | None:intergenic | 60.0% | |
| GGCGGGATTCAAATGGCCAC+CGG | + | chr1.4:12329014-12329033 | None:intergenic | 60.0% | |
| GGGCCAAGCAACCCAAGCAA+GGG | + | chr1.4:12331179-12331198 | None:intergenic | 60.0% | |
| GTGACCTTGGGCCTCCTTGT+TGG | - | chr1.4:12329034-12329053 | MS.gene32446:intron | 60.0% | |
| GTTGGGCCTCTCATTGGTGG+TGG | - | chr1.4:12332447-12332466 | MS.gene32446:CDS | 60.0% | |
| TGATGTGGCCGCCAACAAGG+AGG | + | chr1.4:12329048-12329067 | None:intergenic | 60.0% | |
| TGTGAGTAGGGCCGGCCTAA+GGG | + | chr1.4:12331199-12331218 | None:intergenic | 60.0% | |
| ! | AGCGGGTGGTCTTGCCAAGT+TGG | + | chr1.4:12331256-12331275 | None:intergenic | 60.0% |
| ! | GCTTGGGTTGCTTGGCCCTT+AGG | - | chr1.4:12331181-12331200 | MS.gene32446:intron | 60.0% |
| ! | TGGGTTGGGCCTCTCATTGG+TGG | - | chr1.4:12332444-12332463 | MS.gene32446:CDS | 60.0% |
| !! | ATGGTGGTTGGCTTGGAGGG+AGG | - | chr1.4:12330713-12330732 | MS.gene32446:intron | 60.0% |
| !! | CTCATTGGTGGTGGGCTTGC+TGG | - | chr1.4:12332456-12332475 | MS.gene32446:CDS | 60.0% |
| AAGGAGGCCCAAGGTCACGG+CGG | + | chr1.4:12329032-12329051 | None:intergenic | 65.0% | |
| CGGTGATGTGGCCGCCAACA+AGG | + | chr1.4:12329051-12329070 | None:intergenic | 65.0% | |
| GGGTTGCTTGGCCCTTAGGC+CGG | - | chr1.4:12331185-12331204 | MS.gene32446:intron | 65.0% | |
| GTGTGAGTAGGGCCGGCCTA+AGG | + | chr1.4:12331200-12331219 | None:intergenic | 65.0% | |
| AGGAGGCCCAAGGTCACGGC+GGG | + | chr1.4:12329031-12329050 | None:intergenic | 70.0% | |
| GCCACCGGAAACGTGACCGG+CGG | + | chr1.4:12328999-12329018 | None:intergenic | 70.0% | |
| GCCGCCAACAAGGAGGCCCA+AGG | + | chr1.4:12329041-12329060 | None:intergenic | 70.0% | |
| TCCGCCGGTCACGTTTCCGG+TGG | - | chr1.4:12328995-12329014 | MS.gene32446:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 12328358 | 12332548 | 12328358 | ID=MS.gene32446 |
| chr1.4 | mRNA | 12328358 | 12332548 | 12328358 | ID=MS.gene32446.t1;Parent=MS.gene32446 |
| chr1.4 | exon | 12332422 | 12332548 | 12332422 | ID=MS.gene32446.t1.exon1;Parent=MS.gene32446.t1 |
| chr1.4 | CDS | 12332422 | 12332548 | 12332422 | ID=cds.MS.gene32446.t1;Parent=MS.gene32446.t1 |
| chr1.4 | exon | 12331750 | 12331988 | 12331750 | ID=MS.gene32446.t1.exon2;Parent=MS.gene32446.t1 |
| chr1.4 | CDS | 12331750 | 12331988 | 12331750 | ID=cds.MS.gene32446.t1;Parent=MS.gene32446.t1 |
| chr1.4 | exon | 12328358 | 12328735 | 12328358 | ID=MS.gene32446.t1.exon3;Parent=MS.gene32446.t1 |
| chr1.4 | CDS | 12328358 | 12328735 | 12328358 | ID=cds.MS.gene32446.t1;Parent=MS.gene32446.t1 |
| Gene Sequence |
| Protein sequence |
