Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38378.t1 | XP_003602873.2 | 99.6 | 243 | 1 | 0 | 1 | 243 | 1937 | 2179 | 9.20E-129 | 469.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38378.t1 | Q6IMT1 | 81.5 | 243 | 44 | 1 | 1 | 243 | 1929 | 2170 | 7.4e-103 | 374.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38378.t1 | G7J4I8 | 99.6 | 243 | 1 | 0 | 1 | 243 | 1937 | 2179 | 6.6e-129 | 469.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene38378 | 0.862719 | 4.15E-64 | -1.69E-46 |
| MS.gene049159 | MS.gene38378 | 0.804489 | 2.11E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene38378 | 0.805641 | 1.21E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene38378 | 0.803467 | 3.44E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene38378 | 0.810116 | 1.35E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene38378 | 0.814376 | 1.59E-51 | -1.69E-46 |
| MS.gene049585 | MS.gene38378 | 0.803956 | 2.72E-49 | -1.69E-46 |
| MS.gene049744 | MS.gene38378 | 0.836805 | 7.54E-57 | -1.69E-46 |
| MS.gene049801 | MS.gene38378 | 0.804132 | 2.50E-49 | -1.69E-46 |
| MS.gene050348 | MS.gene38378 | 0.818865 | 1.57E-52 | -1.69E-46 |
| MS.gene050551 | MS.gene38378 | 0.830683 | 2.56E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene38378 | 0.813985 | 1.94E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene38378 | 0.83123 | 1.88E-55 | -1.69E-46 |
| MS.gene051066 | MS.gene38378 | 0.805661 | 1.20E-49 | -1.69E-46 |
| MS.gene051147 | MS.gene38378 | 0.802339 | 5.88E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene38378 | 0.827527 | 1.49E-54 | -1.69E-46 |
| MS.gene051209 | MS.gene38378 | 0.816932 | 4.29E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene38378 | 0.81343 | 2.57E-51 | -1.69E-46 |
| MS.gene051332 | MS.gene38378 | 0.80469 | 1.91E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene38378 | 0.813003 | 3.19E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene38378 | 0.816186 | 6.30E-52 | -1.69E-46 |
| MS.gene051800 | MS.gene38378 | 0.868372 | 6.86E-66 | -1.69E-46 |
| MS.gene052016 | MS.gene38378 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene052168 | MS.gene38378 | 0.838703 | 2.46E-57 | -1.69E-46 |
| MS.gene052307 | MS.gene38378 | 0.832518 | 9.03E-56 | -1.69E-46 |
| MS.gene052311 | MS.gene38378 | 0.808925 | 2.44E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene38378 | 0.83596 | 1.24E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene38378 | 0.803244 | 3.82E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene38378 | 0.869698 | 2.55E-66 | -1.69E-46 |
| MS.gene052674 | MS.gene38378 | 0.817097 | 3.94E-52 | -1.69E-46 |
| MS.gene052675 | MS.gene38378 | 0.821678 | 3.55E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene38378 | 0.825718 | 4.02E-54 | -1.69E-46 |
| MS.gene052775 | MS.gene38378 | 0.877936 | 4.21E-69 | -1.69E-46 |
| MS.gene052776 | MS.gene38378 | 0.861803 | 7.94E-64 | -1.69E-46 |
| MS.gene053079 | MS.gene38378 | 0.839721 | 1.34E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene38378 | 0.808688 | 2.74E-50 | -1.69E-46 |
| MS.gene05350 | MS.gene38378 | 0.81184 | 5.72E-51 | -1.69E-46 |
| MS.gene053620 | MS.gene38378 | 0.815495 | 8.98E-52 | -1.69E-46 |
| MS.gene053621 | MS.gene38378 | 0.820783 | 5.72E-53 | -1.69E-46 |
| MS.gene054139 | MS.gene38378 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene054467 | MS.gene38378 | 0.811886 | 5.59E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene38378 | 0.836768 | 7.71E-57 | -1.69E-46 |
| MS.gene054576 | MS.gene38378 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene05458 | MS.gene38378 | 0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene054641 | MS.gene38378 | 0.82018 | 7.86E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene38378 | 0.822002 | 2.99E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene38378 | 0.80712 | 5.90E-50 | -1.69E-46 |
| MS.gene054943 | MS.gene38378 | 0.803955 | 2.72E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene38378 | 0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene38378 | 0.819686 | 1.02E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene38378 | 0.841399 | 4.86E-58 | -1.69E-46 |
| MS.gene055864 | MS.gene38378 | 0.837753 | 4.32E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene38378 | 0.833746 | 4.47E-56 | -1.69E-46 |
| MS.gene056045 | MS.gene38378 | 0.845369 | 4.24E-59 | -1.69E-46 |
| MS.gene056050 | MS.gene38378 | 0.832235 | 1.06E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene38378 | 0.802354 | 5.84E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene38378 | 0.807697 | 4.45E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene38378 | 0.838366 | 3.00E-57 | -1.69E-46 |
| MS.gene056390 | MS.gene38378 | 0.808602 | 2.86E-50 | -1.69E-46 |
| MS.gene056480 | MS.gene38378 | 0.806018 | 1.01E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene38378 | 0.859028 | 5.49E-63 | -1.69E-46 |
| MS.gene056519 | MS.gene38378 | 0.827615 | 1.42E-54 | -1.69E-46 |
| MS.gene056622 | MS.gene38378 | 0.81881 | 1.61E-52 | -1.69E-46 |
| MS.gene056831 | MS.gene38378 | 0.807522 | 4.85E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene38378 | 0.807188 | 5.71E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene38378 | 0.80869 | 2.74E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene38378 | 0.802505 | 5.44E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene38378 | 0.832972 | 6.97E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene38378 | 0.835743 | 1.40E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene38378 | 0.836224 | 1.06E-56 | -1.69E-46 |
| MS.gene058081 | MS.gene38378 | 0.836385 | 9.65E-57 | -1.69E-46 |
| MS.gene058289 | MS.gene38378 | 0.863928 | 1.75E-64 | -1.69E-46 |
| MS.gene058330 | MS.gene38378 | 0.801433 | 9.03E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene38378 | 0.817943 | 2.54E-52 | -1.69E-46 |
| MS.gene058639 | MS.gene38378 | 0.819043 | 1.43E-52 | -1.69E-46 |
| MS.gene058647 | MS.gene38378 | 0.847448 | 1.15E-59 | -1.69E-46 |
| MS.gene058649 | MS.gene38378 | 0.826884 | 2.12E-54 | -1.69E-46 |
| MS.gene058919 | MS.gene38378 | 0.841412 | 4.83E-58 | -1.69E-46 |
| MS.gene058979 | MS.gene38378 | 0.800759 | 1.24E-48 | -1.69E-46 |
| MS.gene059170 | MS.gene38378 | 0.811567 | 6.56E-51 | -1.69E-46 |
| MS.gene059438 | MS.gene38378 | 0.825676 | 4.12E-54 | -1.69E-46 |
| MS.gene059439 | MS.gene38378 | 0.87223 | 3.73E-67 | -1.69E-46 |
| MS.gene059440 | MS.gene38378 | 0.81486 | 1.24E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene38378 | 0.834317 | 3.22E-56 | -1.69E-46 |
| MS.gene059725 | MS.gene38378 | 0.824938 | 6.15E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene38378 | 0.805488 | 1.30E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene38378 | 0.800487 | 1.41E-48 | -1.69E-46 |
| MS.gene060373 | MS.gene38378 | 0.804745 | 1.86E-49 | -1.69E-46 |
| MS.gene060380 | MS.gene38378 | 0.824964 | 6.07E-54 | -1.69E-46 |
| MS.gene060400 | MS.gene38378 | 0.811071 | 8.41E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene38378 | 0.828862 | 7.10E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene38378 | 0.859777 | 3.27E-63 | -1.69E-46 |
| MS.gene060637 | MS.gene38378 | 0.823598 | 1.27E-53 | -1.69E-46 |
| MS.gene060777 | MS.gene38378 | 0.853648 | 2.08E-61 | -1.69E-46 |
| MS.gene060785 | MS.gene38378 | 0.835303 | 1.81E-56 | -1.69E-46 |
| MS.gene060932 | MS.gene38378 | 0.817281 | 3.58E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene38378 | 0.845027 | 5.24E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene38378 | 0.80246 | 5.55E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene38378 | 0.813312 | 2.73E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene38378 | 0.80292 | 4.46E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene38378 | 0.807275 | 5.47E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38378.t1 | MTR_3g099880 | 99.588 | 243 | 1 | 0 | 1 | 243 | 1937 | 2179 | 9.51e-162 | 496 |
| MS.gene38378.t1 | MTR_5g066650 | 77.366 | 243 | 55 | 0 | 1 | 243 | 1946 | 2188 | 2.08e-119 | 375 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38378.t1 | AT1G58250 | 79.835 | 243 | 48 | 1 | 1 | 243 | 1981 | 2222 | 1.00e-116 | 367 |
| MS.gene38378.t1 | AT1G58250 | 79.835 | 243 | 48 | 1 | 1 | 243 | 1933 | 2174 | 1.12e-116 | 367 |
| MS.gene38378.t1 | AT5G49680 | 66.255 | 243 | 82 | 0 | 1 | 243 | 1939 | 2181 | 5.29e-98 | 313 |
Find 57 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTTGGTGTGACCCTTC+TGG | 0.254424 | 3.2:+83004237 | MS.gene38378:CDS |
| ATATTCGAAAATTGTCTCTT+TGG | 0.273912 | 3.2:+83004223 | MS.gene38378:CDS |
| AAACAACTTTGTTAATTTCC+AGG | 0.319377 | 3.2:-83005979 | None:intergenic |
| TGGAAATTAACAAAGTTGTT+TGG | 0.338507 | 3.2:+83005981 | MS.gene38378:CDS |
| AGGCAGCAGCCGTAGCATTA+AGG | 0.356698 | 3.2:+83005876 | MS.gene38378:CDS |
| GAAGCTCTCTCTTCAGTCCT+TGG | 0.385585 | 3.2:-83005832 | None:intergenic |
| CATCCAGCATGACCTGAAAC+TGG | 0.437691 | 3.2:-83003298 | None:intergenic |
| AATGACGTCTCGCCAGTTTC+AGG | 0.438745 | 3.2:+83003286 | MS.gene38378:CDS |
| GTTTGGAGCATGCTTGTTGA+TGG | 0.458966 | 3.2:+83005998 | MS.gene38378:CDS |
| CTATGCTATGCGGATATCCC+TGG | 0.459169 | 3.2:+83005961 | MS.gene38378:CDS |
| CGTAGAAATATGACTTTGAC+CGG | 0.472869 | 3.2:+83006429 | MS.gene38378:intron |
| AACAACTTTGTTAATTTCCA+GGG | 0.477513 | 3.2:-83005978 | None:intergenic |
| TTGAATGCGAGCTCCTTCAA+TGG | 0.480879 | 3.2:-83003242 | None:intergenic |
| AGTGACTTGTGGATGATAAC+TGG | 0.486256 | 3.2:+83004282 | MS.gene38378:CDS |
| TGGAGATGTACATCCTGAAA+AGG | 0.503118 | 3.2:+83004257 | MS.gene38378:CDS |
| TGACTTTGACCGGGATTACA+AGG | 0.506216 | 3.2:+83006439 | MS.gene38378:CDS |
| CACCTACGTCCTTGTAATCC+CGG | 0.507254 | 3.2:-83006448 | None:intergenic |
| TCCACCTCTTCAACACCATC+AGG | 0.507267 | 3.2:-83004144 | None:intergenic |
| AAAAGCTGCACAGCTACGGC+TGG | 0.513377 | 3.2:+83005910 | MS.gene38378:CDS |
| GGAAGCCGAGATTAATGACT+TGG | 0.516110 | 3.2:+83006033 | MS.gene38378:CDS |
| TCTTACCAAGTCATTAATCT+CGG | 0.519462 | 3.2:-83006038 | None:intergenic |
| ATGGAATCCTCCATCCGAAT+GGG | 0.524340 | 3.2:+83006547 | MS.gene38378:CDS |
| ACCGCAGGTGAAGCCATTGA+AGG | 0.532475 | 3.2:+83003229 | None:intergenic |
| GGGCTGGCCATTACTTTGGA+AGG | 0.534500 | 3.2:-83003346 | None:intergenic |
| AGTTACATACAATTCCCATT+CGG | 0.535799 | 3.2:-83006561 | None:intergenic |
| CGTCTTCAGCAGGAAAGGAC+AGG | 0.538931 | 3.2:-83004086 | None:intergenic |
| ACATCATCATCGTCTTCAGC+AGG | 0.541829 | 3.2:-83004096 | None:intergenic |
| ACAGCTACGGCTGGCAGAGA+AGG | 0.546550 | 3.2:+83005919 | MS.gene38378:CDS |
| TCGCCAGTTTCAGGTCATGC+TGG | 0.547181 | 3.2:+83003295 | MS.gene38378:CDS |
| AAGAGCCAACCTTAATGCTA+CGG | 0.550296 | 3.2:-83005885 | None:intergenic |
| TGTTGATGGTAAATCCTTTG+CGG | 0.557319 | 3.2:+83006012 | MS.gene38378:CDS |
| TATCAGACTTGGCATTAGGC+AGG | 0.557520 | 3.2:-83006511 | None:intergenic |
| AAGGCGTGCAAAGAGAAGAT+TGG | 0.557766 | 3.2:-83003327 | None:intergenic |
| ATCATCGTCTTCAGCAGGAA+AGG | 0.559375 | 3.2:-83004091 | None:intergenic |
| TACAATTCCCATTCGGATGG+AGG | 0.562350 | 3.2:-83006554 | None:intergenic |
| AACTGGTGGAATATCTATGC+TGG | 0.564622 | 3.2:+83004299 | MS.gene38378:CDS |
| AGCATATCAGACTTGGCATT+AGG | 0.564994 | 3.2:-83006515 | None:intergenic |
| ATCCCACACTGGCAGGTCCA+AGG | 0.571272 | 3.2:+83005815 | MS.gene38378:intron |
| ACATACAATTCCCATTCGGA+TGG | 0.579376 | 3.2:-83006557 | None:intergenic |
| ATTAATCTCGGCTTCCGCAA+AGG | 0.582565 | 3.2:-83006026 | None:intergenic |
| CAGGGATATCCGCATAGCAT+AGG | 0.583992 | 3.2:-83005960 | None:intergenic |
| AGCAGCCGTAGCATTAAGGT+TGG | 0.587813 | 3.2:+83005880 | MS.gene38378:CDS |
| TCCTGATGGTGTTGAAGAGG+TGG | 0.590985 | 3.2:+83004143 | MS.gene38378:CDS |
| TCAGGATGTACATCTCCAGA+AGG | 0.591621 | 3.2:-83004252 | None:intergenic |
| TGACAAAAGCATATCAGACT+TGG | 0.600297 | 3.2:-83006522 | None:intergenic |
| CATGGAATCCTCCATCCGAA+TGG | 0.603094 | 3.2:+83006546 | MS.gene38378:CDS |
| CTGAAAAGGAAAGTGACTTG+TGG | 0.605400 | 3.2:+83004271 | MS.gene38378:CDS |
| GGTTCCTGATGGTGTTGAAG+AGG | 0.614321 | 3.2:+83004140 | MS.gene38378:CDS |
| GATATCCGCATAGCATAGGA+AGG | 0.629669 | 3.2:-83005956 | None:intergenic |
| CAGGATGTACATCTCCAGAA+GGG | 0.634884 | 3.2:-83004251 | None:intergenic |
| GCAGATGAGGTGGTTCCTGA+TGG | 0.653744 | 3.2:+83004129 | MS.gene38378:CDS |
| TGTTGAAGAAGAAGCAGATG+AGG | 0.658716 | 3.2:+83004116 | MS.gene38378:CDS |
| TGAAGAAGAAGCAGATGAGG+TGG | 0.660161 | 3.2:+83004119 | MS.gene38378:CDS |
| GTAGAAATATGACTTTGACC+GGG | 0.702199 | 3.2:+83006430 | MS.gene38378:intron |
| AAAGTCCTTCCTATGCTATG+CGG | 0.703609 | 3.2:+83005951 | MS.gene38378:CDS |
| GACTTGTGGATGATAACTGG+TGG | 0.713325 | 3.2:+83004285 | MS.gene38378:CDS |
| GACCGGGATTACAAGGACGT+AGG | 0.729538 | 3.2:+83006446 | MS.gene38378:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAGTAATTTTTTTTACA+TGG | + | chr3.2:83006207-83006226 | MS.gene38378:intron | 10.0% |
| !! | AATGAATAATGCAATATATT+TGG | - | chr3.2:83005441-83005460 | None:intergenic | 15.0% |
| !! | TACTAACTACTATATTAATA+AGG | + | chr3.2:83005606-83005625 | MS.gene38378:intron | 15.0% |
| !!! | TAATAATGTAAGAAACTTTT+AGG | - | chr3.2:83006192-83006211 | None:intergenic | 15.0% |
| !! | AAGCACTAATACATTTAAAT+AGG | + | chr3.2:83004640-83004659 | MS.gene38378:intron | 20.0% |
| !! | AGAAATAGGTAAATGTTAAA+AGG | - | chr3.2:83003408-83003427 | None:intergenic | 20.0% |
| !! | ATTTCAAGAGAAAATTTGAT+AGG | - | chr3.2:83006163-83006182 | None:intergenic | 20.0% |
| !! | ATTTCTATAAAAGTGAAAGA+AGG | + | chr3.2:83005136-83005155 | MS.gene38378:intron | 20.0% |
| !! | CATATATCACAGAATATATT+GGG | - | chr3.2:83004011-83004030 | None:intergenic | 20.0% |
| !! | TAAGGGAATAGAATAATATT+CGG | + | chr3.2:83004972-83004991 | MS.gene38378:intron | 20.0% |
| !! | TCATATATCACAGAATATAT+TGG | - | chr3.2:83004012-83004031 | None:intergenic | 20.0% |
| !! | TTTCAAGAGAAAATTTGATA+GGG | - | chr3.2:83006162-83006181 | None:intergenic | 20.0% |
| !!! | ACACTTTTTTAATAACAATC+AGG | - | chr3.2:83003566-83003585 | None:intergenic | 20.0% |
| !!! | ACTTTTATAGAAATGTTCTT+GGG | - | chr3.2:83005130-83005149 | None:intergenic | 20.0% |
| !!! | ATTATTCTATTCCCTTATTT+AGG | - | chr3.2:83004969-83004988 | None:intergenic | 20.0% |
| ! | AAACAACTTTGTTAATTTCC+AGG | - | chr3.2:83005982-83006001 | None:intergenic | 25.0% |
| ! | AACAACTTTGTTAATTTCCA+GGG | - | chr3.2:83005981-83006000 | None:intergenic | 25.0% |
| ! | ACATAATATAGGATCACTAT+TGG | + | chr3.2:83003612-83003631 | MS.gene38378:intron | 25.0% |
| ! | ACGTTCATAGATATAAAACA+CGG | - | chr3.2:83003481-83003500 | None:intergenic | 25.0% |
| ! | ACTAGTTGACTACATAATAT+AGG | + | chr3.2:83003601-83003620 | MS.gene38378:intron | 25.0% |
| ! | AGAAACAAATAACTATACTG+TGG | + | chr3.2:83004578-83004597 | MS.gene38378:intron | 25.0% |
| ! | ATAGATTACAGATATAGTGA+GGG | - | chr3.2:83004838-83004857 | None:intergenic | 25.0% |
| ! | ATATTCGAAAATTGTCTCTT+TGG | + | chr3.2:83004223-83004242 | MS.gene38378:CDS | 25.0% |
| ! | GAAATAAAACAAATAAGGGT+TGG | - | chr3.2:83005566-83005585 | None:intergenic | 25.0% |
| ! | GATTATACATGTGAAAACTT+AGG | - | chr3.2:83005479-83005498 | None:intergenic | 25.0% |
| ! | GCTCATTTAATCATGAAAAT+TGG | + | chr3.2:83005645-83005664 | MS.gene38378:intron | 25.0% |
| ! | GGTCGAAATAAAACAAATAA+GGG | - | chr3.2:83005570-83005589 | None:intergenic | 25.0% |
| ! | TAGAGCTATATATCATATGA+TGG | - | chr3.2:83004937-83004956 | None:intergenic | 25.0% |
| ! | TAGTTAGTAGAGTAGTTATT+AGG | - | chr3.2:83005595-83005614 | None:intergenic | 25.0% |
| ! | TGGAAATTAACAAAGTTGTT+TGG | + | chr3.2:83005981-83006000 | MS.gene38378:CDS | 25.0% |
| ! | TTGTTAGTAATAACTGTGTT+CGG | - | chr3.2:83004698-83004717 | None:intergenic | 25.0% |
| !! | CACTTTTATAGAAATGTTCT+TGG | - | chr3.2:83005131-83005150 | None:intergenic | 25.0% |
| !! | GTTTGTTTAAGTTACTTGAA+AGG | - | chr3.2:83003989-83004008 | None:intergenic | 25.0% |
| !! | TTTGTAAGAGTATGCTAATT+CGG | + | chr3.2:83006389-83006408 | MS.gene38378:intron | 25.0% |
| !!! | AGAAGAGCCATAATTTTAAT+GGG | - | chr3.2:83005331-83005350 | None:intergenic | 25.0% |
| !!! | TGACTTGGTAAGATTTATTT+AGG | + | chr3.2:83006048-83006067 | MS.gene38378:intron | 25.0% |
| AAGTGCACAAAAATCTAGAA+AGG | + | chr3.2:83005856-83005875 | MS.gene38378:CDS | 30.0% | |
| AATAGAATAATATTCGGCCA+GGG | + | chr3.2:83004978-83004997 | MS.gene38378:intron | 30.0% | |
| AGAGGTAATTAATGCTTCAT+TGG | - | chr3.2:83005540-83005559 | None:intergenic | 30.0% | |
| AGATGAATAGCATTGTGATT+AGG | - | chr3.2:83003455-83003474 | None:intergenic | 30.0% | |
| AGCAAATGTGTGATAGAAAT+AGG | - | chr3.2:83003422-83003441 | None:intergenic | 30.0% | |
| ATACAAAACTGAACGCTATT+GGG | + | chr3.2:83006239-83006258 | MS.gene38378:intron | 30.0% | |
| ATATTCATTCACCATCTTGA+GGG | - | chr3.2:83004742-83004761 | None:intergenic | 30.0% | |
| CAAACTTGATGAGTTAAGAT+AGG | + | chr3.2:83003540-83003559 | MS.gene38378:intron | 30.0% | |
| CAAATAATGAGACAAACCAT+AGG | - | chr3.2:83005504-83005523 | None:intergenic | 30.0% | |
| CAAATTCAAATACCTGAGAA+TGG | + | chr3.2:83006309-83006328 | MS.gene38378:intron | 30.0% | |
| CATAAAAATATCACCAAGCA+CGG | - | chr3.2:83004442-83004461 | None:intergenic | 30.0% | |
| CATTCTCAGGTATTTGAATT+TGG | - | chr3.2:83006311-83006330 | None:intergenic | 30.0% | |
| CCAAAGAGGTTCTATTATAT+AGG | + | chr3.2:83004552-83004571 | MS.gene38378:intron | 30.0% | |
| CCTATATAATAGAACCTCTT+TGG | - | chr3.2:83004555-83004574 | None:intergenic | 30.0% | |
| CTATACTGTGGAAAATATCA+CGG | + | chr3.2:83004590-83004609 | MS.gene38378:intron | 30.0% | |
| GATAGATTACAGATATAGTG+AGG | - | chr3.2:83004839-83004858 | None:intergenic | 30.0% | |
| GGGTCGAAATAAAACAAATA+AGG | - | chr3.2:83005571-83005590 | None:intergenic | 30.0% | |
| TAAGAGTCGATAATAAACAG+AGG | - | chr3.2:83003772-83003791 | None:intergenic | 30.0% | |
| TAGTAGAGTAGTTATTAGGT+GGG | - | chr3.2:83005591-83005610 | None:intergenic | 30.0% | |
| TATACAAAACTGAACGCTAT+TGG | + | chr3.2:83006238-83006257 | MS.gene38378:intron | 30.0% | |
| TCACATGTATAATCATCCTA+TGG | + | chr3.2:83005485-83005504 | MS.gene38378:intron | 30.0% | |
| TCGAGACCAAAAAGATAAAT+CGG | - | chr3.2:83006369-83006388 | None:intergenic | 30.0% | |
| TCTTACCAAGTCATTAATCT+CGG | - | chr3.2:83006041-83006060 | None:intergenic | 30.0% | |
| TGTGGGATTACTATTTGATT+AGG | - | chr3.2:83005803-83005822 | None:intergenic | 30.0% | |
| TTAGTAGAGTAGTTATTAGG+TGG | - | chr3.2:83005592-83005611 | None:intergenic | 30.0% | |
| ! | ACTTTCCCGATTTATCTTTT+TGG | + | chr3.2:83006360-83006379 | MS.gene38378:intron | 30.0% |
| ! | GAGAAGAGCCATAATTTTAA+TGG | - | chr3.2:83005332-83005351 | None:intergenic | 30.0% |
| ! | TTCTATTCCCTTATTTAGGA+CGG | - | chr3.2:83004965-83004984 | None:intergenic | 30.0% |
| !! | TGGTGATATTTTTATGCGTA+TGG | + | chr3.2:83004446-83004465 | MS.gene38378:intron | 30.0% |
| !!! | TTTACCCTTTTTGAAGTAGT+GGG | + | chr3.2:83005383-83005402 | MS.gene38378:intron | 30.0% |
| ACAAATAAGGGTTGGAAAAG+AGG | - | chr3.2:83005558-83005577 | None:intergenic | 35.0% | |
| ACCCATGTTAAATCAACTGA+CGG | - | chr3.2:83005031-83005050 | None:intergenic | 35.0% | |
| ACGTTTACTTCCAAAACTGA+CGG | + | chr3.2:83006094-83006113 | MS.gene38378:intron | 35.0% | |
| ATAGGCTATTCTAAGCCTAA+TGG | + | chr3.2:83004658-83004677 | MS.gene38378:intron | 35.0% | |
| ATCAAATAGTAATCCCACAC+TGG | + | chr3.2:83005804-83005823 | MS.gene38378:intron | 35.0% | |
| ATGAAAATTGGCACACTCAA+TGG | + | chr3.2:83005657-83005676 | MS.gene38378:intron | 35.0% | |
| ATGCTGGTAAGAAATGAACT+TGG | + | chr3.2:83004315-83004334 | MS.gene38378:intron | 35.0% | |
| ATTCAAATACCTGAGAATGG+TGG | + | chr3.2:83006312-83006331 | MS.gene38378:intron | 35.0% | |
| CAACCTTGAAAAAAGAGAGA+GGG | + | chr3.2:83004179-83004198 | MS.gene38378:CDS | 35.0% | |
| CCTGCATCCCATTAAAATTA+TGG | + | chr3.2:83005321-83005340 | MS.gene38378:intron | 35.0% | |
| CGAGACCAAAAAGATAAATC+GGG | - | chr3.2:83006368-83006387 | None:intergenic | 35.0% | |
| CGTAGAAATATGACTTTGAC+CGG | + | chr3.2:83006429-83006448 | MS.gene38378:intron | 35.0% | |
| CTGTCACAAATGAAATCTCT+GGG | - | chr3.2:83003659-83003678 | None:intergenic | 35.0% | |
| GAATAGAATAATATTCGGCC+AGG | + | chr3.2:83004977-83004996 | MS.gene38378:intron | 35.0% | |
| GATATTCATTCACCATCTTG+AGG | - | chr3.2:83004743-83004762 | None:intergenic | 35.0% | |
| GCAACATCATTAAGAATGCA+AGG | - | chr3.2:83005292-83005311 | None:intergenic | 35.0% | |
| GCTGTGTAGGTATAGTTATT+TGG | + | chr3.2:83003719-83003738 | MS.gene38378:intron | 35.0% | |
| GCTTCACATGAAGCATAAAA+TGG | + | chr3.2:83006133-83006152 | MS.gene38378:intron | 35.0% | |
| GTAGAAATATGACTTTGACC+GGG | + | chr3.2:83006430-83006449 | MS.gene38378:intron | 35.0% | |
| TAGGCTATTCTAAGCCTAAT+GGG | + | chr3.2:83004659-83004678 | MS.gene38378:intron | 35.0% | |
| TATACCACCGTCCTAAATAA+GGG | + | chr3.2:83004955-83004974 | MS.gene38378:intron | 35.0% | |
| TATTCATTCACCATCTTGAG+GGG | - | chr3.2:83004741-83004760 | None:intergenic | 35.0% | |
| TCAACCTTGAAAAAAGAGAG+AGG | + | chr3.2:83004178-83004197 | MS.gene38378:CDS | 35.0% | |
| TCTGTCACAAATGAAATCTC+TGG | - | chr3.2:83003660-83003679 | None:intergenic | 35.0% | |
| TCTTAATGATGTTGCTCAGT+GGG | + | chr3.2:83005297-83005316 | MS.gene38378:intron | 35.0% | |
| TGGAAACAATCCTTTCAAAG+TGG | + | chr3.2:83004777-83004796 | MS.gene38378:intron | 35.0% | |
| TTCTTAATGATGTTGCTCAG+TGG | + | chr3.2:83005296-83005315 | MS.gene38378:intron | 35.0% | |
| TTTCCCCACTACTTCAAAAA+GGG | - | chr3.2:83005390-83005409 | None:intergenic | 35.0% | |
| ! | AGTAATTTAGAATGAGCGCT+AGG | - | chr3.2:83003380-83003399 | None:intergenic | 35.0% |
| ! | TGACAAAAGCATATCAGACT+TGG | - | chr3.2:83006525-83006544 | None:intergenic | 35.0% |
| ! | TTTGGTGTAGTTGAAACACA+AGG | - | chr3.2:83004537-83004556 | None:intergenic | 35.0% |
| !! | ATTCCTTTTGATGATCCAGA+CGG | - | chr3.2:83004804-83004823 | None:intergenic | 35.0% |
| !! | CCATAATTTTAATGGGATGC+AGG | - | chr3.2:83005324-83005343 | None:intergenic | 35.0% |
| !! | TGTTGATGGTAAATCCTTTG+CGG | + | chr3.2:83006012-83006031 | MS.gene38378:CDS | 35.0% |
| !!! | CTTTACCCTTTTTGAAGTAG+TGG | + | chr3.2:83005382-83005401 | MS.gene38378:intron | 35.0% |
| !!! | TTACCCTTTTTGAAGTAGTG+GGG | + | chr3.2:83005384-83005403 | MS.gene38378:intron | 35.0% |
| AAAGTCCTTCCTATGCTATG+CGG | + | chr3.2:83005951-83005970 | MS.gene38378:CDS | 40.0% | |
| AACTGGTGGAATATCTATGC+TGG | + | chr3.2:83004299-83004318 | MS.gene38378:CDS | 40.0% | |
| AAGAGCCAACCTTAATGCTA+CGG | - | chr3.2:83005888-83005907 | None:intergenic | 40.0% | |
| AAGGACCATAGTCCACAAAA+TGG | - | chr3.2:83005273-83005292 | None:intergenic | 40.0% | |
| AATATCTATCACTCCCAGCT+TGG | + | chr3.2:83004757-83004776 | MS.gene38378:intron | 40.0% | |
| AGCATATCAGACTTGGCATT+AGG | - | chr3.2:83006518-83006537 | None:intergenic | 40.0% | |
| AGCCAGTTTCTGCAATAAGA+AGG | - | chr3.2:83003796-83003815 | None:intergenic | 40.0% | |
| AGCCTTCTTATTGCAGAAAC+TGG | + | chr3.2:83003791-83003810 | MS.gene38378:intron | 40.0% | |
| AGTCCACAAAATGGAATGGA+CGG | - | chr3.2:83005264-83005283 | None:intergenic | 40.0% | |
| ATGGCTCTTCTCATATGATG+TGG | + | chr3.2:83005340-83005359 | MS.gene38378:intron | 40.0% | |
| ATTCATTCACCATCTTGAGG+GGG | - | chr3.2:83004740-83004759 | None:intergenic | 40.0% | |
| CCATAGTCCACAAAATGGAA+TGG | - | chr3.2:83005268-83005287 | None:intergenic | 40.0% | |
| CCCATGTTAAATCAACTGAC+GGG | - | chr3.2:83005030-83005049 | None:intergenic | 40.0% | |
| CCTCTGTCTCATATTAAGTG+CGG | - | chr3.2:83005712-83005731 | None:intergenic | 40.0% | |
| CGCACTTAATATGAGACAGA+GGG | + | chr3.2:83005710-83005729 | MS.gene38378:intron | 40.0% | |
| CTATACCACCGTCCTAAATA+AGG | + | chr3.2:83004954-83004973 | MS.gene38378:intron | 40.0% | |
| CTCATATTAAGTGCGGCTTA+TGG | - | chr3.2:83005705-83005724 | None:intergenic | 40.0% | |
| CTGAAAAGGAAAGTGACTTG+TGG | + | chr3.2:83004271-83004290 | MS.gene38378:CDS | 40.0% | |
| CTTAATGATGTTGCTCAGTG+GGG | + | chr3.2:83005298-83005317 | MS.gene38378:intron | 40.0% | |
| CTTTCCCCACTACTTCAAAA+AGG | - | chr3.2:83005391-83005410 | None:intergenic | 40.0% | |
| GAAAGGATTGTTTCCAAGCT+GGG | - | chr3.2:83004773-83004792 | None:intergenic | 40.0% | |
| GTGTTTCAACTACACCAAAG+AGG | + | chr3.2:83004538-83004557 | MS.gene38378:intron | 40.0% | |
| TGAAAGGATTGTTTCCAAGC+TGG | - | chr3.2:83004774-83004793 | None:intergenic | 40.0% | |
| TGGAGATGTACATCCTGAAA+AGG | + | chr3.2:83004257-83004276 | MS.gene38378:CDS | 40.0% | |
| TGGGAGTTTAGTGAAGTTAC+CGG | - | chr3.2:83005111-83005130 | None:intergenic | 40.0% | |
| TGTTGAAGAAGAAGCAGATG+AGG | + | chr3.2:83004116-83004135 | MS.gene38378:CDS | 40.0% | |
| TTACAGATATAGTGAGGGTG+TGG | - | chr3.2:83004833-83004852 | None:intergenic | 40.0% | |
| TTCAAAAAGCTGCACAGCTA+CGG | + | chr3.2:83005906-83005925 | MS.gene38378:CDS | 40.0% | |
| ! | ACCCGTCAGTTGATTTAACA+TGG | + | chr3.2:83005026-83005045 | MS.gene38378:intron | 40.0% |
| ! | AGTGACTTGTGGATGATAAC+TGG | + | chr3.2:83004282-83004301 | MS.gene38378:CDS | 40.0% |
| ! | CCCGTCAGTTGATTTAACAT+GGG | + | chr3.2:83005027-83005046 | MS.gene38378:intron | 40.0% |
| ! | CTGATATGCTTTTGTCAGCA+TGG | + | chr3.2:83006528-83006547 | MS.gene38378:CDS | 40.0% |
| ! | GACTGATGTGATTTTTCCCT+TGG | - | chr3.2:83006266-83006285 | None:intergenic | 40.0% |
| ! | TATTCCCTTATTTAGGACGG+TGG | - | chr3.2:83004962-83004981 | None:intergenic | 40.0% |
| !! | CACAAGTCACTTTCCTTTTC+AGG | - | chr3.2:83004273-83004292 | None:intergenic | 40.0% |
| !! | CACTATTGGCTTCTTTGAAG+AGG | + | chr3.2:83003626-83003645 | MS.gene38378:intron | 40.0% |
| !! | CCATTCCATTTTGTGGACTA+TGG | + | chr3.2:83005265-83005284 | MS.gene38378:intron | 40.0% |
| !! | TAAGTTTTAGCCTCGTGCTT+GGG | + | chr3.2:83004902-83004921 | MS.gene38378:intron | 40.0% |
| !! | TTCCTTTTGATGATCCAGAC+GGG | - | chr3.2:83004803-83004822 | None:intergenic | 40.0% |
| AAGGCGTGCAAAGAGAAGAT+TGG | - | chr3.2:83003330-83003349 | None:intergenic | 45.0% | |
| AATAGTAATCCCACACTGGC+AGG | + | chr3.2:83005808-83005827 | MS.gene38378:intron | 45.0% | |
| AATCAGATACGTACCGTGCT+TGG | + | chr3.2:83004426-83004445 | MS.gene38378:intron | 45.0% | |
| ACATCATCATCGTCTTCAGC+AGG | - | chr3.2:83004099-83004118 | None:intergenic | 45.0% | |
| ACCGGGAGTTAGAGATGTTT+GGG | - | chr3.2:83005093-83005112 | None:intergenic | 45.0% | |
| AGAACAATACGCTGCTGTGT+AGG | + | chr3.2:83003706-83003725 | MS.gene38378:intron | 45.0% | |
| ATATGCATTCGACTCCACTC+AGG | + | chr3.2:83004049-83004068 | MS.gene38378:intron | 45.0% | |
| ATCATCGTCTTCAGCAGGAA+AGG | - | chr3.2:83004094-83004113 | None:intergenic | 45.0% | |
| ATGGAATCCTCCATCCGAAT+GGG | + | chr3.2:83006547-83006566 | MS.gene38378:CDS | 45.0% | |
| ATTAATCTCGGCTTCCGCAA+AGG | - | chr3.2:83006029-83006048 | None:intergenic | 45.0% | |
| CAAGCACGAGGCTAAAACTT+AGG | - | chr3.2:83004903-83004922 | None:intergenic | 45.0% | |
| CAGGATGTACATCTCCAGAA+GGG | - | chr3.2:83004254-83004273 | None:intergenic | 45.0% | |
| CCGCACTTAATATGAGACAG+AGG | + | chr3.2:83005709-83005728 | MS.gene38378:intron | 45.0% | |
| GACTTGTGGATGATAACTGG+TGG | + | chr3.2:83004285-83004304 | MS.gene38378:CDS | 45.0% | |
| GATATCCGCATAGCATAGGA+AGG | - | chr3.2:83005959-83005978 | None:intergenic | 45.0% | |
| GATGTGGCACTATCTTTGCT+CGG | + | chr3.2:83005356-83005375 | MS.gene38378:intron | 45.0% | |
| GGAAGCCGAGATTAATGACT+TGG | + | chr3.2:83006033-83006052 | MS.gene38378:CDS | 45.0% | |
| GGGAGTTTAGTGAAGTTACC+GGG | - | chr3.2:83005110-83005129 | None:intergenic | 45.0% | |
| TACCGGGAGTTAGAGATGTT+TGG | - | chr3.2:83005094-83005113 | None:intergenic | 45.0% | |
| TATCAGACTTGGCATTAGGC+AGG | - | chr3.2:83006514-83006533 | None:intergenic | 45.0% | |
| TCAGGATGTACATCTCCAGA+AGG | - | chr3.2:83004255-83004274 | None:intergenic | 45.0% | |
| TGAAGAAGAAGCAGATGAGG+TGG | + | chr3.2:83004119-83004138 | MS.gene38378:CDS | 45.0% | |
| TGACTTTGACCGGGATTACA+AGG | + | chr3.2:83006439-83006458 | MS.gene38378:CDS | 45.0% | |
| TTGAATGCGAGCTCCTTCAA+TGG | - | chr3.2:83003245-83003264 | None:intergenic | 45.0% | |
| TTGCACGCCTTCCAAAGTAA+TGG | + | chr3.2:83003339-83003358 | MS.gene38378:intron | 45.0% | |
| ! | AAAGTGCACTCCGTCAGTTT+TGG | - | chr3.2:83006107-83006126 | None:intergenic | 45.0% |
| ! | ACACCGTCCATTCCATTTTG+TGG | + | chr3.2:83005258-83005277 | MS.gene38378:intron | 45.0% |
| ! | AGCCTAATGGGCCTAGTAAA+TGG | + | chr3.2:83004671-83004690 | MS.gene38378:intron | 45.0% |
| ! | CAGAGGTATATGCTGATGTG+AGG | - | chr3.2:83003755-83003774 | None:intergenic | 45.0% |
| ! | GCCTAATGGGCCTAGTAAAT+GGG | + | chr3.2:83004672-83004691 | MS.gene38378:intron | 45.0% |
| ! | GGGTCAATGTAACTTGCCTA+GGG | - | chr3.2:83005010-83005029 | None:intergenic | 45.0% |
| ! | GTTTGGAGCATGCTTGTTGA+TGG | + | chr3.2:83005998-83006017 | MS.gene38378:CDS | 45.0% |
| !! | AAGTTTTAGCCTCGTGCTTG+GGG | + | chr3.2:83004903-83004922 | MS.gene38378:intron | 45.0% |
| !! | CAGAAACTGGCTCGAAATAG+TGG | + | chr3.2:83003804-83003823 | MS.gene38378:intron | 45.0% |
| !! | CTAAGTTTTAGCCTCGTGCT+TGG | + | chr3.2:83004901-83004920 | MS.gene38378:intron | 45.0% |
| !!! | GCTCCCTCTCTCTTTTTTCA+AGG | - | chr3.2:83004185-83004204 | None:intergenic | 45.0% |
| AATGACGTCTCGCCAGTTTC+AGG | + | chr3.2:83003286-83003305 | MS.gene38378:CDS | 50.0% | |
| AATGAGCGCTAGGAGCTAAG+TGG | - | chr3.2:83003370-83003389 | None:intergenic | 50.0% | |
| AATGGGCAACTTGGCGTGTA+AGG | - | chr3.2:83005057-83005076 | None:intergenic | 50.0% | |
| ACTGAACGCTATTGGGACCA+AGG | + | chr3.2:83006246-83006265 | MS.gene38378:intron | 50.0% | |
| AGCAACGAACCACCATTCTC+AGG | - | chr3.2:83006324-83006343 | None:intergenic | 50.0% | |
| AGCAGCCGTAGCATTAAGGT+TGG | + | chr3.2:83005880-83005899 | MS.gene38378:CDS | 50.0% | |
| ATGAGCGCTAGGAGCTAAGT+GGG | - | chr3.2:83003369-83003388 | None:intergenic | 50.0% | |
| ATGGGCAACTTGGCGTGTAA+GGG | - | chr3.2:83005056-83005075 | None:intergenic | 50.0% | |
| CACCTACGTCCTTGTAATCC+CGG | - | chr3.2:83006451-83006470 | None:intergenic | 50.0% | |
| CAGGGATATCCGCATAGCAT+AGG | - | chr3.2:83005963-83005982 | None:intergenic | 50.0% | |
| CATCCAGCATGACCTGAAAC+TGG | - | chr3.2:83003301-83003320 | None:intergenic | 50.0% | |
| CATGGAATCCTCCATCCGAA+TGG | + | chr3.2:83006546-83006565 | MS.gene38378:CDS | 50.0% | |
| CTATGCTATGCGGATATCCC+TGG | + | chr3.2:83005961-83005980 | MS.gene38378:CDS | 50.0% | |
| CTGAACGCTATTGGGACCAA+GGG | + | chr3.2:83006247-83006266 | MS.gene38378:intron | 50.0% | |
| CTGTGTTCGGCCCATTTACT+AGG | - | chr3.2:83004685-83004704 | None:intergenic | 50.0% | |
| GAAGCTCTCTCTTCAGTCCT+TGG | - | chr3.2:83005835-83005854 | None:intergenic | 50.0% | |
| GCCCAAACATCTCTAACTCC+CGG | + | chr3.2:83005089-83005108 | MS.gene38378:intron | 50.0% | |
| GCCCATTTACTAGGCCCATT+AGG | - | chr3.2:83004676-83004695 | None:intergenic | 50.0% | |
| GGAGTTAGAGATGTTTGGGC+GGG | - | chr3.2:83005089-83005108 | None:intergenic | 50.0% | |
| GGGAGTTAGAGATGTTTGGG+CGG | - | chr3.2:83005090-83005109 | None:intergenic | 50.0% | |
| TACAACACTCCCCCTCAAGA+TGG | + | chr3.2:83004728-83004747 | MS.gene38378:intron | 50.0% | |
| TCCACCTCTTCAACACCATC+AGG | - | chr3.2:83004147-83004166 | None:intergenic | 50.0% | |
| TTAGAGATGTTTGGGCGGGT+CGG | - | chr3.2:83005085-83005104 | None:intergenic | 50.0% | |
| ! | CGGGTCAATGTAACTTGCCT+AGG | - | chr3.2:83005011-83005030 | None:intergenic | 50.0% |
| ! | GGTTCCTGATGGTGTTGAAG+AGG | + | chr3.2:83004140-83004159 | MS.gene38378:CDS | 50.0% |
| ! | TCCTGATGGTGTTGAAGAGG+TGG | + | chr3.2:83004143-83004162 | MS.gene38378:CDS | 50.0% |
| ! | TCTCTTTGGTGTGACCCTTC+TGG | + | chr3.2:83004237-83004256 | MS.gene38378:CDS | 50.0% |
| !! | AAGTGGGCTGGCCATTACTT+TGG | - | chr3.2:83003353-83003372 | None:intergenic | 50.0% |
| !! | AGTTTTAGCCTCGTGCTTGG+GGG | + | chr3.2:83004904-83004923 | MS.gene38378:intron | 50.0% |
| !! | TCGGTGGATAATGGGCAACT+TGG | - | chr3.2:83005066-83005085 | None:intergenic | 50.0% |
| !!! | AAGGACAGGCTACTTTTCCG+AGG | - | chr3.2:83004075-83004094 | None:intergenic | 50.0% |
| AAAAGCTGCACAGCTACGGC+TGG | + | chr3.2:83005910-83005929 | MS.gene38378:CDS | 55.0% | |
| AGGCAGCAGCCGTAGCATTA+AGG | + | chr3.2:83005876-83005895 | MS.gene38378:CDS | 55.0% | |
| ATTCGACTCCACTCAGGCCT+CGG | + | chr3.2:83004055-83004074 | MS.gene38378:intron | 55.0% | |
| CCTGACTGACACCATACCAG+CGG | + | chr3.2:83005206-83005225 | MS.gene38378:intron | 55.0% | |
| CGTCTTCAGCAGGAAAGGAC+AGG | - | chr3.2:83004089-83004108 | None:intergenic | 55.0% | |
| CTGACTGACACCATACCAGC+GGG | + | chr3.2:83005207-83005226 | MS.gene38378:intron | 55.0% | |
| GACCGGGATTACAAGGACGT+AGG | + | chr3.2:83006446-83006465 | MS.gene38378:CDS | 55.0% | |
| GCAGATGAGGTGGTTCCTGA+TGG | + | chr3.2:83004129-83004148 | MS.gene38378:CDS | 55.0% | |
| GGCCCGTCTGGATCATCAAA+AGG | + | chr3.2:83004798-83004817 | MS.gene38378:intron | 55.0% | |
| TCCTTTCAAAGTGGCCCGTC+TGG | + | chr3.2:83004786-83004805 | MS.gene38378:intron | 55.0% | |
| TGACTGACACCATACCAGCG+GGG | + | chr3.2:83005208-83005227 | MS.gene38378:intron | 55.0% | |
| ! | CGCTGGTATGGTGTCAGTCA+GGG | - | chr3.2:83005208-83005227 | None:intergenic | 55.0% |
| ! | TCCAGACGGGCCACTTTGAA+AGG | - | chr3.2:83004790-83004809 | None:intergenic | 55.0% |
| ! | TCGCCAGTTTCAGGTCATGC+TGG | + | chr3.2:83003295-83003314 | MS.gene38378:CDS | 55.0% |
| ! | TGGTATGGTGTCAGTCAGGG+TGG | - | chr3.2:83005205-83005224 | None:intergenic | 55.0% |
| !! | CTACTTTTCCGAGGCCTGAG+TGG | - | chr3.2:83004066-83004085 | None:intergenic | 55.0% |
| !! | GGGCTGGCCATTACTTTGGA+AGG | - | chr3.2:83003349-83003368 | None:intergenic | 55.0% |
| ACAGCTACGGCTGGCAGAGA+AGG | + | chr3.2:83005919-83005938 | MS.gene38378:CDS | 60.0% | |
| AGTCCTTGGACCTGCCAGTG+TGG | - | chr3.2:83005821-83005840 | None:intergenic | 60.0% | |
| ATCCCACACTGGCAGGTCCA+AGG | + | chr3.2:83005815-83005834 | MS.gene38378:intron | 60.0% | |
| CTTGCCTAGGGCTGTATCCC+TGG | - | chr3.2:83004998-83005017 | None:intergenic | 60.0% | |
| GACTGACACCATACCAGCGG+GGG | + | chr3.2:83005209-83005228 | MS.gene38378:intron | 60.0% | |
| GTCCTTGGACCTGCCAGTGT+GGG | - | chr3.2:83005820-83005839 | None:intergenic | 60.0% | |
| TGGGCGGGTCGGTGGATAAT+GGG | - | chr3.2:83005074-83005093 | None:intergenic | 60.0% | |
| TTGGGCGGGTCGGTGGATAA+TGG | - | chr3.2:83005075-83005094 | None:intergenic | 60.0% | |
| ! | CCGCTGGTATGGTGTCAGTC+AGG | - | chr3.2:83005209-83005228 | None:intergenic | 60.0% |
| GACACCATACCAGCGGGGGT+GGG | + | chr3.2:83005213-83005232 | MS.gene38378:intron | 65.0% | |
| GAGATGTTTGGGCGGGTCGG+TGG | - | chr3.2:83005082-83005101 | None:intergenic | 65.0% | |
| GCGCTAGGAGCTAAGTGGGC+TGG | - | chr3.2:83003365-83003384 | None:intergenic | 65.0% | |
| TCGGCCAGGGATACAGCCCT+AGG | + | chr3.2:83004991-83005010 | MS.gene38378:intron | 65.0% | |
| TGACACCATACCAGCGGGGG+TGG | + | chr3.2:83005212-83005231 | MS.gene38378:intron | 65.0% | |
| ACGATCGTTCCCACCCCCGC+TGG | - | chr3.2:83005225-83005244 | None:intergenic | 70.0% | |
| AGCCTCGTGCTTGGGGGCTG+TGG | + | chr3.2:83004910-83004929 | MS.gene38378:intron | 70.0% | |
| CGTTCCCACCCCCGCTGGTA+TGG | - | chr3.2:83005220-83005239 | None:intergenic | 70.0% | |
| GTCCACAGCCCCCAAGCACG+AGG | - | chr3.2:83004915-83004934 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 83003236 | 83006573 | 83003236 | ID=MS.gene38378 |
| chr3.2 | mRNA | 83003236 | 83006573 | 83003236 | ID=MS.gene38378.t1;Parent=MS.gene38378 |
| chr3.2 | exon | 83003236 | 83003354 | 83003236 | ID=MS.gene38378.t1.exon1;Parent=MS.gene38378.t1 |
| chr3.2 | CDS | 83003236 | 83003354 | 83003236 | ID=cds.MS.gene38378.t1;Parent=MS.gene38378.t1 |
| chr3.2 | exon | 83004071 | 83004320 | 83004071 | ID=MS.gene38378.t1.exon2;Parent=MS.gene38378.t1 |
| chr3.2 | CDS | 83004071 | 83004320 | 83004071 | ID=cds.MS.gene38378.t1;Parent=MS.gene38378.t1 |
| chr3.2 | exon | 83005830 | 83006054 | 83005830 | ID=MS.gene38378.t1.exon3;Parent=MS.gene38378.t1 |
| chr3.2 | CDS | 83005830 | 83006054 | 83005830 | ID=cds.MS.gene38378.t1;Parent=MS.gene38378.t1 |
| chr3.2 | exon | 83006434 | 83006573 | 83006434 | ID=MS.gene38378.t1.exon4;Parent=MS.gene38378.t1 |
| chr3.2 | CDS | 83006434 | 83006573 | 83006434 | ID=cds.MS.gene38378.t1;Parent=MS.gene38378.t1 |
| Gene Sequence |
| Protein sequence |
