Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45403.t1 | XP_024638882.1 | 97.1 | 279 | 8 | 0 | 1 | 279 | 1 | 279 | 4.80E-150 | 540.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45403.t1 | A0A396I9U6 | 97.1 | 279 | 8 | 0 | 1 | 279 | 1 | 279 | 3.5e-150 | 540.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene45403 | 0.815015 | 1.15E-51 | -1.69E-46 |
| MS.gene049151 | MS.gene45403 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene45403 | 0.815221 | 1.03E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene45403 | 0.803989 | 2.68E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene45403 | 0.811594 | 6.47E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene45403 | 0.841916 | 3.55E-58 | -1.69E-46 |
| MS.gene049915 | MS.gene45403 | 0.828461 | 8.88E-55 | -1.69E-46 |
| MS.gene050099 | MS.gene45403 | 0.804599 | 2.00E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene45403 | 0.836415 | 9.49E-57 | -1.69E-46 |
| MS.gene050226 | MS.gene45403 | 0.806831 | 6.79E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene45403 | 0.838532 | 2.72E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene45403 | 0.802939 | 4.42E-49 | -1.69E-46 |
| MS.gene050398 | MS.gene45403 | 0.823278 | 1.51E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene45403 | 0.811292 | 7.53E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene45403 | 0.80899 | 2.36E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene45403 | 0.843991 | 9.97E-59 | -1.69E-46 |
| MS.gene051983 | MS.gene45403 | 0.813602 | 2.36E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene45403 | 0.811315 | 7.44E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene45403 | 0.824425 | 8.13E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene45403 | 0.826976 | 2.02E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene45403 | 0.808984 | 2.37E-50 | -1.69E-46 |
| MS.gene052255 | MS.gene45403 | 0.815792 | 7.71E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene45403 | 0.826864 | 2.15E-54 | -1.69E-46 |
| MS.gene053074 | MS.gene45403 | 0.815381 | 9.52E-52 | -1.69E-46 |
| MS.gene05316 | MS.gene45403 | 0.819967 | 8.79E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene45403 | 0.835722 | 1.42E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene45403 | 0.842112 | 3.16E-58 | -1.69E-46 |
| MS.gene053928 | MS.gene45403 | 0.861132 | 1.27E-63 | -1.69E-46 |
| MS.gene054010 | MS.gene45403 | 0.827771 | 1.30E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene45403 | 0.828041 | 1.12E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene45403 | 0.824133 | 9.52E-54 | -1.69E-46 |
| MS.gene054013 | MS.gene45403 | 0.82241 | 2.40E-53 | -1.69E-46 |
| MS.gene054184 | MS.gene45403 | 0.845362 | 4.26E-59 | -1.69E-46 |
| MS.gene054185 | MS.gene45403 | 0.852344 | 4.91E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene45403 | 0.820469 | 6.75E-53 | -1.69E-46 |
| MS.gene054556 | MS.gene45403 | 0.807268 | 5.49E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene45403 | 0.808915 | 2.45E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene45403 | 0.812156 | 4.89E-51 | -1.69E-46 |
| MS.gene055133 | MS.gene45403 | 0.814953 | 1.19E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene45403 | 0.813856 | 2.07E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene45403 | 0.829083 | 6.28E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene45403 | 0.80315 | 4.00E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene45403 | 0.847889 | 8.69E-60 | -1.69E-46 |
| MS.gene056191 | MS.gene45403 | 0.811721 | 6.08E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene45403 | 0.813468 | 2.52E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene45403 | 0.814421 | 1.55E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene45403 | 0.802295 | 6.00E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene45403 | 0.80913 | 2.20E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene45403 | 0.814134 | 1.80E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene45403 | 0.843474 | 1.37E-58 | -1.69E-46 |
| MS.gene057796 | MS.gene45403 | 0.809407 | 1.92E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene45403 | 0.844044 | 9.65E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene45403 | 0.871055 | 9.14E-67 | -1.69E-46 |
| MS.gene058142 | MS.gene45403 | 0.827476 | 1.53E-54 | -1.69E-46 |
| MS.gene058749 | MS.gene45403 | 0.814609 | 1.41E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene45403 | 0.808187 | 3.50E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene45403 | 0.846681 | 1.86E-59 | -1.69E-46 |
| MS.gene059124 | MS.gene45403 | 0.834534 | 2.84E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene45403 | 0.809023 | 2.32E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene45403 | 0.843009 | 1.82E-58 | -1.69E-46 |
| MS.gene059421 | MS.gene45403 | 0.826472 | 2.66E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene45403 | 0.846274 | 2.41E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene45403 | 0.801082 | 1.06E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene45403 | 0.85822 | 9.57E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene45403 | 0.818567 | 1.83E-52 | -1.69E-46 |
| MS.gene059974 | MS.gene45403 | 0.822549 | 2.23E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene45403 | 0.841468 | 4.67E-58 | -1.69E-46 |
| MS.gene060476 | MS.gene45403 | 0.808234 | 3.42E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene45403 | 0.846188 | 2.54E-59 | -1.69E-46 |
| MS.gene061154 | MS.gene45403 | 0.813508 | 2.47E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45403.t1 | MTR_4g088515 | 97.015 | 268 | 8 | 0 | 1 | 268 | 1 | 268 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45403.t1 | AT4G26415 | 45.299 | 234 | 61 | 10 | 3 | 192 | 7 | 217 | 3.13e-44 | 152 |
Find 59 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTCCTCAAGAACTCTT+TGG | 0.228130 | 4.4:+24350247 | MS.gene45403:CDS |
| TCAATGAATATAGTGGAATA+AGG | 0.272127 | 4.4:+24350516 | MS.gene45403:CDS |
| TGGTGTTGTGGCAAAGTTAA+TGG | 0.280238 | 4.4:+24350772 | MS.gene45403:CDS |
| GCCATTTGAGAGGCATGATT+TGG | 0.298125 | 4.4:+24350892 | MS.gene45403:CDS |
| TCCATGTATAGGTCATCTTT+TGG | 0.313265 | 4.4:+24350632 | MS.gene45403:CDS |
| TCTTATGCCTTTCTTCATCT+TGG | 0.319608 | 4.4:-24350273 | None:intergenic |
| TTTCTCCTCAAGAACTCTTT+GGG | 0.349291 | 4.4:+24350248 | MS.gene45403:CDS |
| AACCAACAAAATAGTACTAT+TGG | 0.366556 | 4.4:+24350332 | MS.gene45403:CDS |
| TGGATATTGTATTATGAAAC+CGG | 0.367697 | 4.4:+24350997 | MS.gene45403:CDS |
| GGATGAGTAGTGTTGATTGT+AGG | 0.385703 | 4.4:+24350849 | MS.gene45403:CDS |
| CAATGAATATAGTGGAATAA+GGG | 0.392950 | 4.4:+24350517 | MS.gene45403:CDS |
| AGAACCAAAGCTTGATGAAA+AGG | 0.407802 | 4.4:+24350697 | MS.gene45403:CDS |
| GCCATAGCTTCTAGAGAAAC+CGG | 0.424661 | 4.4:-24351016 | None:intergenic |
| GGTGTTGTGGCAAAGTTAAT+GGG | 0.432813 | 4.4:+24350773 | MS.gene45403:CDS |
| TGTGGCAAAGTTAATGGGTT+TGG | 0.433784 | 4.4:+24350778 | MS.gene45403:CDS |
| TCTTATACTACAATTAGAAA+TGG | 0.443850 | 4.4:+24350466 | MS.gene45403:CDS |
| CTCCTTGGTTGCCAACTACT+AGG | 0.453422 | 4.4:-24351046 | None:intergenic |
| GTTAGAAGAAGAAATAGGTC+TGG | 0.472977 | 4.4:+24350959 | MS.gene45403:CDS |
| AGTATAAGATCTTCTAATGT+TGG | 0.477524 | 4.4:-24350452 | None:intergenic |
| TCCAAATCATGCCTCTCAAA+TGG | 0.478781 | 4.4:-24350893 | None:intergenic |
| TGCTGCTTGTGATGTCAACT+TGG | 0.485632 | 4.4:-24350376 | None:intergenic |
| AGTACTATTGGCAATGGCAT+TGG | 0.489373 | 4.4:+24350344 | MS.gene45403:CDS |
| CTAATCTAAACATATCTCCT+TGG | 0.491234 | 4.4:-24351061 | None:intergenic |
| AAAACTAGCAATGGACATGC+AGG | 0.491726 | 4.4:+24350919 | MS.gene45403:CDS |
| CCCAAAAGATGACCTATACA+TGG | 0.498041 | 4.4:-24350633 | None:intergenic |
| TTGTGATGTCAACTTGGCTA+TGG | 0.503039 | 4.4:-24350370 | None:intergenic |
| TTCTCCCCAGCAACTGTTGG+TGG | 0.503702 | 4.4:-24350731 | None:intergenic |
| GTAGGAGACAAAATATAAGA+AGG | 0.511223 | 4.4:+24350867 | MS.gene45403:CDS |
| ATGGAAGAGATTCCATGTAT+AGG | 0.512387 | 4.4:+24350621 | MS.gene45403:CDS |
| ATTAACTTTGCCACAACACC+AGG | 0.513967 | 4.4:-24350770 | None:intergenic |
| TGGCAGGAGGTCCTAGTAGT+TGG | 0.521625 | 4.4:+24351035 | MS.gene45403:CDS |
| ACCGGTTTCTCTAGAAGCTA+TGG | 0.522607 | 4.4:+24351015 | MS.gene45403:CDS |
| TTGCTGGGGAGAACGTGGTT+TGG | 0.527912 | 4.4:+24350741 | MS.gene45403:CDS |
| ACATTGTTAGAAGAAGAAAT+AGG | 0.529346 | 4.4:+24350954 | MS.gene45403:CDS |
| ATGCTTTGAATCAATATCCA+AGG | 0.531501 | 4.4:+24350588 | MS.gene45403:CDS |
| AAATGGAGGAAGAGATGGCA+AGG | 0.533678 | 4.4:+24350483 | MS.gene45403:CDS |
| ATTAGAAATGGAGGAAGAGA+TGG | 0.541356 | 4.4:+24350478 | MS.gene45403:CDS |
| GAGTTCTTGAGGAGAAAGAA+TGG | 0.549925 | 4.4:-24350242 | None:intergenic |
| TTGGGAGCCAAGATGAAGAA+AGG | 0.561593 | 4.4:+24350266 | MS.gene45403:CDS |
| CAAAATAGTACTATTGGCAA+TGG | 0.563916 | 4.4:+24350338 | MS.gene45403:CDS |
| CTTCCATCAAGTGAAAACCT+TGG | 0.575355 | 4.4:-24350605 | None:intergenic |
| GTCCTAGTAGTTGGCAACCA+AGG | 0.577078 | 4.4:+24351044 | MS.gene45403:CDS |
| AATGAATATAGTGGAATAAG+GGG | 0.579962 | 4.4:+24350518 | MS.gene45403:CDS |
| TATACTACAATTAGAAATGG+AGG | 0.596710 | 4.4:+24350469 | MS.gene45403:CDS |
| TGGCTCCCAAAGAGTTCTTG+AGG | 0.597986 | 4.4:-24350253 | None:intergenic |
| GAAGCTATTCCAGTGTCAGT+AGG | 0.605402 | 4.4:+24350800 | MS.gene45403:CDS |
| TTTGGAGAGAAAACTAGCAA+TGG | 0.605568 | 4.4:+24350910 | MS.gene45403:CDS |
| AACGTGGTTTGGTGTAAACC+TGG | 0.608504 | 4.4:+24350752 | MS.gene45403:CDS |
| GTTTCTCTAGAAGCTATGGC+AGG | 0.610709 | 4.4:+24351019 | MS.gene45403:CDS |
| AACAGTTGCTGGGGAGAACG+TGG | 0.612915 | 4.4:+24350736 | MS.gene45403:CDS |
| AATATAGTGGAATAAGGGGA+AGG | 0.620558 | 4.4:+24350522 | MS.gene45403:CDS |
| GGAGACAAAATATAAGAAGG+AGG | 0.626425 | 4.4:+24350870 | MS.gene45403:CDS |
| TAAGAAGGAGGCCATTTGAG+AGG | 0.627512 | 4.4:+24350882 | MS.gene45403:CDS |
| CTGACATATTAAGATCTGCA+AGG | 0.639107 | 4.4:+24350564 | MS.gene45403:CDS |
| AGTTGACATCACAAGCAGCA+AGG | 0.656859 | 4.4:+24350379 | MS.gene45403:CDS |
| ACGTTCTCCCCAGCAACTGT+TGG | 0.657823 | 4.4:-24350734 | None:intergenic |
| TCTCTAGAAGCTATGGCAGG+AGG | 0.665560 | 4.4:+24351022 | MS.gene45403:CDS |
| TTGGTGTAAACCTGGTGTTG+TGG | 0.669247 | 4.4:+24350760 | MS.gene45403:CDS |
| AAACTAGCAATGGACATGCA+GGG | 0.676573 | 4.4:+24350920 | MS.gene45403:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTATACTACAATTAGAAA+TGG | + | chr4.4:24350466-24350485 | MS.gene45403:CDS | 20.0% |
| ! | AACCAACAAAATAGTACTAT+TGG | + | chr4.4:24350332-24350351 | MS.gene45403:CDS | 25.0% |
| ! | ACATTGTTAGAAGAAGAAAT+AGG | + | chr4.4:24350954-24350973 | MS.gene45403:CDS | 25.0% |
| ! | AGTATAAGATCTTCTAATGT+TGG | - | chr4.4:24350455-24350474 | None:intergenic | 25.0% |
| ! | GAAAAACTCAATGAATATAG+TGG | + | chr4.4:24350509-24350528 | MS.gene45403:CDS | 25.0% |
| ! | TATACTACAATTAGAAATGG+AGG | + | chr4.4:24350469-24350488 | MS.gene45403:CDS | 25.0% |
| ! | TGGATATTGTATTATGAAAC+CGG | + | chr4.4:24350997-24351016 | MS.gene45403:CDS | 25.0% |
| !! | AATGAATATAGTGGAATAAG+GGG | + | chr4.4:24350518-24350537 | MS.gene45403:CDS | 25.0% |
| !! | CAATGAATATAGTGGAATAA+GGG | + | chr4.4:24350517-24350536 | MS.gene45403:CDS | 25.0% |
| !! | TCAATGAATATAGTGGAATA+AGG | + | chr4.4:24350516-24350535 | MS.gene45403:CDS | 25.0% |
| AAAGATCTGACAAAAAAGAG+AGG | + | chr4.4:24350828-24350847 | MS.gene45403:CDS | 30.0% | |
| AGTTGTCACATTGCAAAAAA+GGG | - | chr4.4:24350412-24350431 | None:intergenic | 30.0% | |
| CAAAATAGTACTATTGGCAA+TGG | + | chr4.4:24350338-24350357 | MS.gene45403:CDS | 30.0% | |
| GTAGGAGACAAAATATAAGA+AGG | + | chr4.4:24350867-24350886 | MS.gene45403:CDS | 30.0% | |
| ! | ATAACCTTTTCATCAAGCTT+TGG | - | chr4.4:24350704-24350723 | None:intergenic | 30.0% |
| ! | ATGCTTTGAATCAATATCCA+AGG | + | chr4.4:24350588-24350607 | MS.gene45403:CDS | 30.0% |
| ! | TGCCAATAGTACTATTTTGT+TGG | - | chr4.4:24350337-24350356 | None:intergenic | 30.0% |
| !!! | ATTTTGTTGGTTTAGAGTTG+AGG | - | chr4.4:24350324-24350343 | None:intergenic | 30.0% |
| !!! | TCTGGTTTTTGCTCTAAAAA+TGG | + | chr4.4:24350977-24350996 | MS.gene45403:CDS | 30.0% |
| AGAACCAAAGCTTGATGAAA+AGG | + | chr4.4:24350697-24350716 | MS.gene45403:CDS | 35.0% | |
| ATGGAAGAGATTCCATGTAT+AGG | + | chr4.4:24350621-24350640 | MS.gene45403:CDS | 35.0% | |
| ATTAGAAATGGAGGAAGAGA+TGG | + | chr4.4:24350478-24350497 | MS.gene45403:CDS | 35.0% | |
| CTGACATATTAAGATCTGCA+AGG | + | chr4.4:24350564-24350583 | MS.gene45403:CDS | 35.0% | |
| GAGTTGTCACATTGCAAAAA+AGG | - | chr4.4:24350413-24350432 | None:intergenic | 35.0% | |
| GGAGACAAAATATAAGAAGG+AGG | + | chr4.4:24350870-24350889 | MS.gene45403:CDS | 35.0% | |
| GTTAGAAGAAGAAATAGGTC+TGG | + | chr4.4:24350959-24350978 | MS.gene45403:CDS | 35.0% | |
| GTTGTCACATTGCAAAAAAG+GGG | - | chr4.4:24350411-24350430 | None:intergenic | 35.0% | |
| TCTTATGCCTTTCTTCATCT+TGG | - | chr4.4:24350276-24350295 | None:intergenic | 35.0% | |
| TTTCTCCTCAAGAACTCTTT+GGG | + | chr4.4:24350248-24350267 | MS.gene45403:CDS | 35.0% | |
| TTTGGAGAGAAAACTAGCAA+TGG | + | chr4.4:24350910-24350929 | MS.gene45403:CDS | 35.0% | |
| ! | AATATAGTGGAATAAGGGGA+AGG | + | chr4.4:24350522-24350541 | MS.gene45403:CDS | 35.0% |
| ! | CCATGTATAGGTCATCTTTT+GGG | + | chr4.4:24350633-24350652 | MS.gene45403:CDS | 35.0% |
| ! | TATCCAAGGTTTTCACTTGA+TGG | + | chr4.4:24350602-24350621 | MS.gene45403:CDS | 35.0% |
| ! | TCCATGTATAGGTCATCTTT+TGG | + | chr4.4:24350632-24350651 | MS.gene45403:CDS | 35.0% |
| !!! | TCATCTTTTGGGACTATAGA+AGG | + | chr4.4:24350644-24350663 | MS.gene45403:CDS | 35.0% |
| AAAACTAGCAATGGACATGC+AGG | + | chr4.4:24350919-24350938 | MS.gene45403:CDS | 40.0% | |
| AAACTAGCAATGGACATGCA+GGG | + | chr4.4:24350920-24350939 | MS.gene45403:CDS | 40.0% | |
| AGTACTATTGGCAATGGCAT+TGG | + | chr4.4:24350344-24350363 | MS.gene45403:CDS | 40.0% | |
| ATTAACTTTGCCACAACACC+AGG | - | chr4.4:24350773-24350792 | None:intergenic | 40.0% | |
| CCCAAAAGATGACCTATACA+TGG | - | chr4.4:24350636-24350655 | None:intergenic | 40.0% | |
| CTTCCATCAAGTGAAAACCT+TGG | - | chr4.4:24350608-24350627 | None:intergenic | 40.0% | |
| CTTTCTCCTCAAGAACTCTT+TGG | + | chr4.4:24350247-24350266 | MS.gene45403:CDS | 40.0% | |
| GAGTTCTTGAGGAGAAAGAA+TGG | - | chr4.4:24350245-24350264 | None:intergenic | 40.0% | |
| TCCAAATCATGCCTCTCAAA+TGG | - | chr4.4:24350896-24350915 | None:intergenic | 40.0% | |
| TTGTGATGTCAACTTGGCTA+TGG | - | chr4.4:24350373-24350392 | None:intergenic | 40.0% | |
| ! | CTTTTTCTACCTACTGACAC+TGG | - | chr4.4:24350812-24350831 | None:intergenic | 40.0% |
| ! | GGTGTTGTGGCAAAGTTAAT+GGG | + | chr4.4:24350773-24350792 | MS.gene45403:CDS | 40.0% |
| !! | GGATGAGTAGTGTTGATTGT+AGG | + | chr4.4:24350849-24350868 | MS.gene45403:CDS | 40.0% |
| !! | TGGTGTTGTGGCAAAGTTAA+TGG | + | chr4.4:24350772-24350791 | MS.gene45403:CDS | 40.0% |
| !! | TGTGGCAAAGTTAATGGGTT+TGG | + | chr4.4:24350778-24350797 | MS.gene45403:CDS | 40.0% |
| AAATGGAGGAAGAGATGGCA+AGG | + | chr4.4:24350483-24350502 | MS.gene45403:CDS | 45.0% | |
| AGTTGACATCACAAGCAGCA+AGG | + | chr4.4:24350379-24350398 | MS.gene45403:CDS | 45.0% | |
| GAAGCTATTCCAGTGTCAGT+AGG | + | chr4.4:24350800-24350819 | MS.gene45403:CDS | 45.0% | |
| TAAGAAGGAGGCCATTTGAG+AGG | + | chr4.4:24350882-24350901 | MS.gene45403:CDS | 45.0% | |
| TTGGGAGCCAAGATGAAGAA+AGG | + | chr4.4:24350266-24350285 | MS.gene45403:CDS | 45.0% | |
| ! | ACCGGTTTCTCTAGAAGCTA+TGG | + | chr4.4:24351015-24351034 | MS.gene45403:CDS | 45.0% |
| ! | GCCATAGCTTCTAGAGAAAC+CGG | - | chr4.4:24351019-24351038 | None:intergenic | 45.0% |
| ! | GCCATTTGAGAGGCATGATT+TGG | + | chr4.4:24350892-24350911 | MS.gene45403:CDS | 45.0% |
| ! | GTTTCTCTAGAAGCTATGGC+AGG | + | chr4.4:24351019-24351038 | MS.gene45403:CDS | 45.0% |
| ! | GTTTTCCACCAACAGTTGCT+GGG | + | chr4.4:24350726-24350745 | MS.gene45403:CDS | 45.0% |
| ! | TGCTGCTTGTGATGTCAACT+TGG | - | chr4.4:24350379-24350398 | None:intergenic | 45.0% |
| ! | TGTTTTCCACCAACAGTTGC+TGG | + | chr4.4:24350725-24350744 | MS.gene45403:CDS | 45.0% |
| ! | TTGGTGTAAACCTGGTGTTG+TGG | + | chr4.4:24350760-24350779 | MS.gene45403:CDS | 45.0% |
| ! | TTTTCCACCAACAGTTGCTG+GGG | + | chr4.4:24350727-24350746 | MS.gene45403:CDS | 45.0% |
| !! | AACGTGGTTTGGTGTAAACC+TGG | + | chr4.4:24350752-24350771 | MS.gene45403:CDS | 45.0% |
| CTCCTTGGTTGCCAACTACT+AGG | - | chr4.4:24351049-24351068 | None:intergenic | 50.0% | |
| GTCCTAGTAGTTGGCAACCA+AGG | + | chr4.4:24351044-24351063 | MS.gene45403:CDS | 50.0% | |
| TGGCTCCCAAAGAGTTCTTG+AGG | - | chr4.4:24350256-24350275 | None:intergenic | 50.0% | |
| ! | TCTCTAGAAGCTATGGCAGG+AGG | + | chr4.4:24351022-24351041 | MS.gene45403:CDS | 50.0% |
| AACAGTTGCTGGGGAGAACG+TGG | + | chr4.4:24350736-24350755 | MS.gene45403:CDS | 55.0% | |
| ACGTTCTCCCCAGCAACTGT+TGG | - | chr4.4:24350737-24350756 | None:intergenic | 55.0% | |
| TGGCAGGAGGTCCTAGTAGT+TGG | + | chr4.4:24351035-24351054 | MS.gene45403:CDS | 55.0% | |
| TTCTCCCCAGCAACTGTTGG+TGG | - | chr4.4:24350734-24350753 | None:intergenic | 55.0% | |
| TTGCTGGGGAGAACGTGGTT+TGG | + | chr4.4:24350741-24350760 | MS.gene45403:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 24350239 | 24351078 | 24350239 | ID=MS.gene45403 |
| chr4.4 | mRNA | 24350239 | 24351078 | 24350239 | ID=MS.gene45403.t1;Parent=MS.gene45403 |
| chr4.4 | exon | 24350239 | 24351078 | 24350239 | ID=MS.gene45403.t1.exon1;Parent=MS.gene45403.t1 |
| chr4.4 | CDS | 24350239 | 24351078 | 24350239 | ID=cds.MS.gene45403.t1;Parent=MS.gene45403.t1 |
| Gene Sequence |
| Protein sequence |
